Cyclic phosphodiesterase-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| HSF_DNA-bind | PF00447 | 13 - 102 | 1.3e-29 | HSF-type DNA-binding |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 31 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 61, 475 |
| AccBSI | CCGCTC | 2 cut(s) | 859, 870 |
| AccII | CGCG | 2 cut(s) | 251, 854 |
| AclWI | GGATC | 3 cut(s) | 62, 289, 448 |
| AcoI | YGGCCR | 1 cut(s) | 72 |
| AcuI | CTGAAG | 2 cut(s) | 524, 770 |
| AcyI | GRCGYC | 3 cut(s) | 32, 363, 401 |
| AfaI | GTAC | 1 cut(s) | 587 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 61, 310, 475 |
| AgsI | TTSAA | 2 cut(s) | 169, 730 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 367, 400 |
| AjiI | CACGTC | 2 cut(s) | 85, 414 |
| AjnI | CCWGG | 2 cut(s) | 396, 468 |
| AluBI | AGCT | 8 cut(s) | 189, 202, 283, 344, 528, 535, 565, 636 |
| AluI | AGCT | 8 cut(s) | 189, 202, 283, 344, 528, 535, 565, 636 |
| Alw21I | GWGCWC | 1 cut(s) | 530 |
| Alw26I | GTCTC | 3 cut(s) | 354, 443, 512 |
| AlwI | GGATC | 3 cut(s) | 62, 289, 448 |
| Ama87I | CYCGRG | 1 cut(s) | 144 |
| AoxI | GGCC | 4 cut(s) | 72, 333, 599, 815 |
| ApaI | GGGCCC | 1 cut(s) | 603 |
| ApeKI | GCWGC | 2 cut(s) | 283, 341 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 50 |
| AspLEI | GCGC | 2 cut(s) | 34, 856 |
| AspS9I | GGNCC | 5 cut(s) | 394, 599, 600, 642, 815 |
| AsuC2I | CCSGG | 3 cut(s) | 145, 146, 438 |
| AsuHPI | GGTGA | 1 cut(s) | 284 |
| AsuII | TTCGAA | 1 cut(s) | 220 |
| AvaI | CYCGRG | 1 cut(s) | 144 |
| AvaII | GGWCC | 2 cut(s) | 394, 642 |
| BaeGI | GKGCMC | 1 cut(s) | 603 |
| BanI | GGYRCC | 1 cut(s) | 31 |
| BanII | GRGCYC | 2 cut(s) | 530, 603 |
| BbsI | GAAGAC | 4 cut(s) | 53, 134, 309, 408 |
| Bbv12I | GWGCWC | 1 cut(s) | 530 |
| BbvI | GCAGC | 2 cut(s) | 270, 353 |
| BccI | CCATC | 2 cut(s) | 574, 832 |
| BceAI | ACGGC | 2 cut(s) | 19, 126 |
| BciT130I | CCWGG | 2 cut(s) | 398, 470 |
| BclI | TGATCA | 2 cut(s) | 3, 661 |
| BcnI | CCSGG | 3 cut(s) | 145, 146, 438 |
| BcoDI | GTCTC | 3 cut(s) | 354, 443, 512 |
| BfoI | RGCGCY | 1 cut(s) | 35 |
| BisI | GCNGC | 9 cut(s) | 284, 301, 304, 342, 456, 459, 626, 818, 857 |
| BlpI | GCTNAGC | 1 cut(s) | 524 |
| BlsI | GCNGC | 9 cut(s) | 285, 302, 305, 343, 457, 460, 627, 819, 858 |
| Bme1390I | CCNGG | 5 cut(s) | 145, 146, 398, 438, 470 |
| Bme18I | GGWCC | 2 cut(s) | 394, 642 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 367, 400 |
| BmeT110I | CYCGRG | 1 cut(s) | 144 |
| BmgBI | CACGTC | 2 cut(s) | 85, 414 |
| BmgT120I | GGNCC | 5 cut(s) | 394, 599, 600, 642, 815 |
| BmiI | GGNNCC | 3 cut(s) | 33, 601, 643 |
| BmrFI | CCNGG | 5 cut(s) | 145, 146, 398, 438, 470 |
| BpiI | GAAGAC | 4 cut(s) | 53, 134, 309, 408 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 272, 304 |
| Bpu10I | CCTNAGC | 3 cut(s) | 330, 637, 860 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 524 |
| Bpu14I | TTCGAA | 1 cut(s) | 220 |
| BpuEI | CTTGAG | 1 cut(s) | 169 |
| BpuMI | CCSGG | 3 cut(s) | 145, 146, 438 |
| BsaHI | GRCGYC | 3 cut(s) | 32, 363, 401 |
| BsaJI | CCNNGG | 1 cut(s) | 144 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 61, 310, 475 |
| Bse1I | ACTGG | 2 cut(s) | 55, 645 |
| BseBI | CCWGG | 2 cut(s) | 398, 470 |
| BseDI | CCNNGG | 1 cut(s) | 144 |
| BseGI | GGATG | 1 cut(s) | 70 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 61, 310, 475 |
| BseMII | CTCAG | 3 cut(s) | 344, 515, 874 |
| BseNI | ACTGG | 2 cut(s) | 55, 645 |
| BseRI | GAGGAG | 2 cut(s) | 782, 803 |
| BseSI | GKGCMC | 1 cut(s) | 603 |
| BseXI | GCAGC | 2 cut(s) | 270, 353 |
| Bsh1236I | CGCG | 2 cut(s) | 251, 854 |
| BshFI | GGCC | 4 cut(s) | 74, 335, 601, 817 |
| BshNI | GGYRCC | 1 cut(s) | 31 |
| BsiHKAI | GWGCWC | 1 cut(s) | 530 |
| BsiHKCI | CYCGRG | 1 cut(s) | 144 |
| BslFI | GGGAC | 1 cut(s) | 121 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 61, 310, 475 |
| BsmAI | GTCTC | 3 cut(s) | 354, 443, 512 |
| BsmBI | CGTCTC | 2 cut(s) | 354, 512 |
| BsmFI | GGGAC | 1 cut(s) | 121 |
| BsnI | GGCC | 4 cut(s) | 74, 335, 601, 817 |
| BsoBI | CYCGRG | 1 cut(s) | 144 |
| Bsp119I | TTCGAA | 1 cut(s) | 220 |
| Bsp120I | GGGCCC | 1 cut(s) | 599 |
| Bsp1286I | GDGCHC | 2 cut(s) | 530, 603 |
| Bsp143I | GATC | 7 cut(s) | 3, 67, 294, 440, 604, 609, 661 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 524 |
| Bsp68I | TCGCGA | 1 cut(s) | 251 |
| BspANI | GGCC | 4 cut(s) | 74, 335, 601, 817 |
| BspCNI | CTCAG | 3 cut(s) | 343, 516, 873 |
| BspFNI | CGCG | 2 cut(s) | 251, 854 |
| BspLI | GGNNCC | 3 cut(s) | 33, 601, 643 |
| BspPI | GGATC | 3 cut(s) | 62, 289, 448 |
| BspQI | GCTCTTC | 1 cut(s) | 860 |
| BspT104I | TTCGAA | 1 cut(s) | 220 |
| BspT107I | GGYRCC | 1 cut(s) | 31 |
| BsrBI | CCGCTC | 2 cut(s) | 859, 870 |
| BsrI | ACTGG | 2 cut(s) | 55, 645 |
| BssECI | CCNNGG | 1 cut(s) | 144 |
| BssMI | GATC | 7 cut(s) | 3, 67, 294, 440, 604, 609, 661 |
| BssNI | GRCGYC | 3 cut(s) | 32, 363, 401 |
| Bst2UI | CCWGG | 2 cut(s) | 398, 470 |
| Bst4CI | ACNGT | 4 cut(s) | 133, 229, 680, 735 |
| Bst6I | CTCTTC | 2 cut(s) | 714, 860 |
| BstACI | GRCGYC | 3 cut(s) | 32, 363, 401 |
| BstBI | TTCGAA | 1 cut(s) | 220 |
| BstC8I | GCNNGC | 4 cut(s) | 76, 200, 537, 822 |
| BstDEI | CTNAG | 4 cut(s) | 330, 524, 637, 860 |
| BstF5I | GGATG | 1 cut(s) | 70 |
| BstFNI | CGCG | 2 cut(s) | 251, 854 |
| BstH2I | RGCGCY | 1 cut(s) | 35 |
| BstHHI | GCGC | 2 cut(s) | 34, 856 |
| BstKTI | GATC | 7 cut(s) | 6, 70, 297, 443, 607, 612, 664 |
| BstMAI | GTCTC | 3 cut(s) | 354, 443, 512 |
| BstMBI | GATC | 7 cut(s) | 3, 67, 294, 440, 604, 609, 661 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 195, 341 |
| BstNI | CCWGG | 2 cut(s) | 398, 470 |
| BstSCI | CCNGG | 5 cut(s) | 143, 144, 396, 436, 468 |
| BstSLI | GKGCMC | 1 cut(s) | 603 |
| BstUI | CGCG | 2 cut(s) | 251, 854 |
| BstV1I | GCAGC | 2 cut(s) | 270, 353 |
| BstV2I | GAAGAC | 4 cut(s) | 53, 134, 309, 408 |
| BstX2I | RGATCY | 1 cut(s) | 294 |
| BstYI | RGATCY | 1 cut(s) | 294 |
| BsuRI | GGCC | 4 cut(s) | 74, 335, 601, 817 |
| BtrI | CACGTC | 2 cut(s) | 85, 414 |
| BtsCI | GGATG | 1 cut(s) | 70 |
| BtsI | GCAGTG | 1 cut(s) | 560 |
| BtsIMutI | CAGTG | 2 cut(s) | 560, 685 |
| BtuMI | TCGCGA | 1 cut(s) | 251 |
| Cac8I | GCNNGC | 4 cut(s) | 76, 200, 537, 822 |
| CfoI | GCGC | 2 cut(s) | 34, 856 |
| Cfr13I | GGNCC | 5 cut(s) | 394, 599, 600, 642, 815 |
| Cfr9I | CCCGGG | 1 cut(s) | 144 |
| CseI | GACGC | 3 cut(s) | 371, 390, 529 |
| Csp6I | GTAC | 1 cut(s) | 586 |
| CviAII | CATG | 2 cut(s) | 589, 665 |
| CviQI | GTAC | 1 cut(s) | 586 |
| DdeI | CTNAG | 4 cut(s) | 330, 524, 637, 860 |
| DinI | GGCGCC | 1 cut(s) | 33 |
| DpnI | GATC | 7 cut(s) | 5, 69, 296, 442, 606, 611, 663 |
| DpnII | GATC | 7 cut(s) | 3, 67, 294, 440, 604, 609, 661 |
| DriI | GACNNNNNGTC | 2 cut(s) | 367, 400 |
| EaeI | YGGCCR | 1 cut(s) | 72 |
| Eam1104I | CTCTTC | 2 cut(s) | 714, 860 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 367, 400 |
| EarI | CTCTTC | 2 cut(s) | 714, 860 |
| EciI | GGCGGA | 3 cut(s) | 287, 372, 857 |
| Ecl136II | GAGCTC | 1 cut(s) | 528 |
| Eco24I | GRGCYC | 2 cut(s) | 530, 603 |
| Eco32I | GATATC | 1 cut(s) | 90 |
| Eco47I | GGWCC | 2 cut(s) | 394, 642 |
| Eco53kI | GAGCTC | 1 cut(s) | 528 |
| Eco57I | CTGAAG | 2 cut(s) | 524, 770 |
| Eco88I | CYCGRG | 1 cut(s) | 144 |
| EcoICRI | GAGCTC | 1 cut(s) | 528 |
| EcoO109I | RGGNCCY | 1 cut(s) | 394 |
| EcoRII | CCWGG | 2 cut(s) | 396, 468 |
| EcoRV | GATATC | 1 cut(s) | 90 |
| EcoT38I | GRGCYC | 2 cut(s) | 530, 603 |
| EgeI | GGCGCC | 1 cut(s) | 33 |
| EheI | GGCGCC | 1 cut(s) | 33 |
| Esp3I | CGTCTC | 2 cut(s) | 354, 512 |
| FaeI | CATG | 2 cut(s) | 592, 668 |
| FaiI | YATR | 5 cut(s) | 152, 213, 590, 623, 666 |
| FaqI | GGGAC | 1 cut(s) | 121 |
| FatI | CATG | 2 cut(s) | 588, 664 |
| FauI | CCCGC | 2 cut(s) | 703, 863 |
| FbaI | TGATCA | 2 cut(s) | 3, 661 |
| Fnu4HI | GCNGC | 9 cut(s) | 284, 301, 304, 342, 456, 459, 626, 818, 857 |
| FokI | GGATG | 1 cut(s) | 77 |
| FriOI | GRGCYC | 2 cut(s) | 530, 603 |
| Fsp4HI | GCNGC | 9 cut(s) | 284, 301, 304, 342, 456, 459, 626, 818, 857 |
| GlaI | GCGC | 2 cut(s) | 33, 855 |
| GluI | GCNGC | 9 cut(s) | 284, 301, 304, 342, 456, 459, 626, 818, 857 |
| HaeII | RGCGCY | 1 cut(s) | 35 |
| HaeIII | GGCC | 4 cut(s) | 74, 335, 601, 817 |
| HgaI | GACGC | 3 cut(s) | 371, 390, 529 |
| HhaI | GCGC | 2 cut(s) | 34, 856 |
| Hin1I | GRCGYC | 3 cut(s) | 32, 363, 401 |
| Hin1II | CATG | 2 cut(s) | 592, 668 |
| Hin6I | GCGC | 2 cut(s) | 32, 854 |
| HinP1I | GCGC | 2 cut(s) | 32, 854 |
| HincII | GTYRAC | 2 cut(s) | 372, 405 |
| HindII | GTYRAC | 2 cut(s) | 372, 405 |
| HindIII | AAGCTT | 2 cut(s) | 187, 634 |
| HinfI | GANTC | 2 cut(s) | 425, 433 |
| HphI | GGTGA | 1 cut(s) | 284 |
| Hpy166II | GTNNAC | 3 cut(s) | 372, 405, 478 |
| Hpy188I | TCNGA | 6 cut(s) | 42, 292, 532, 579, 609, 618 |
| Hpy188III | TCNNGA | 2 cut(s) | 250, 862 |
| Hpy8I | GTNNAC | 3 cut(s) | 372, 405, 478 |
| Hpy99I | CGWCG | 2 cut(s) | 83, 86 |
| HpyAV | CCTTC | 4 cut(s) | 271, 586, 745, 868 |
| HpyCH4III | ACNGT | 4 cut(s) | 133, 229, 680, 735 |
| HpyCH4IV | ACGT | 3 cut(s) | 50, 84, 413 |
| HpyCH4V | TGCA | 2 cut(s) | 539, 882 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 195, 341 |
| HpyF3I | CTNAG | 4 cut(s) | 330, 524, 637, 860 |
| HpySE526I | ACGT | 3 cut(s) | 50, 84, 413 |
| Hsp92I | GRCGYC | 3 cut(s) | 32, 363, 401 |
| Hsp92II | CATG | 2 cut(s) | 592, 668 |
| HspAI | GCGC | 2 cut(s) | 32, 854 |
| KasI | GGCGCC | 1 cut(s) | 31 |
| Ksp22I | TGATCA | 2 cut(s) | 3, 661 |
| Kzo9I | GATC | 7 cut(s) | 3, 67, 294, 440, 604, 609, 661 |
| LguI | GCTCTTC | 1 cut(s) | 860 |
| LmnI | GCTCC | 2 cut(s) | 280, 532 |
| Lsp1109I | GCAGC | 2 cut(s) | 270, 353 |
| MaeII | ACGT | 3 cut(s) | 50, 84, 413 |
| MaeIII | GTNAC | 1 cut(s) | 674 |
| MalI | GATC | 7 cut(s) | 5, 69, 296, 442, 606, 611, 663 |
| MbiI | CCGCTC | 2 cut(s) | 859, 870 |
| MboI | GATC | 7 cut(s) | 3, 67, 294, 440, 604, 609, 661 |
| MflI | RGATCY | 1 cut(s) | 294 |
| MhlI | GDGCHC | 2 cut(s) | 530, 603 |
| MluCI | AATT | 1 cut(s) | 160 |
| Mly113I | GGCGCC | 1 cut(s) | 32 |
| MlyI | GAGTC | 1 cut(s) | 419 |
| MmeI | TCCRAC | 1 cut(s) | 405 |
| MnlI | CCTC | 6 cut(s) | 263, 385, 715, 760, 777, 781 |
| MroXI | GAANNNNTTC | 1 cut(s) | 50 |
| MseI | TTAA | 1 cut(s) | 204 |
| MslI | CAYNNNNRTG | 1 cut(s) | 669 |
| MspA1I | CMGCKG | 2 cut(s) | 344, 455 |
| MspR9I | CCNGG | 5 cut(s) | 145, 146, 398, 438, 470 |
| MvaI | CCWGG | 2 cut(s) | 398, 470 |
| MvnI | CGCG | 2 cut(s) | 251, 854 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 195, 341 |
| NarI | GGCGCC | 1 cut(s) | 32 |
| NciI | CCSGG | 3 cut(s) | 145, 146, 438 |
| NdeII | GATC | 7 cut(s) | 3, 67, 294, 440, 604, 609, 661 |
| NlaIII | CATG | 2 cut(s) | 592, 668 |
| NlaIV | GGNNCC | 3 cut(s) | 33, 601, 643 |
| NmuCI | GTSAC | 1 cut(s) | 674 |
| NruI | TCGCGA | 1 cut(s) | 251 |
| NspV | TTCGAA | 1 cut(s) | 220 |
| PciSI | GCTCTTC | 1 cut(s) | 860 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 425 |
| PdmI | GAANNNNTTC | 1 cut(s) | 50 |
| PfeI | GAWTC | 1 cut(s) | 433 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 61, 475 |
| PfoI | TCCNGGA | 1 cut(s) | 436 |
| PkrI | GCNGC | 9 cut(s) | 285, 302, 305, 343, 457, 460, 627, 819, 858 |
| PleI | GAGTC | 1 cut(s) | 419 |
| PluTI | GGCGCC | 1 cut(s) | 35 |
| PpsI | GAGTC | 1 cut(s) | 419 |
| PpuMI | RGGWCCY | 1 cut(s) | 394 |
| Psp124BI | GAGCTC | 1 cut(s) | 530 |
| Psp5II | RGGWCCY | 1 cut(s) | 394 |
| Psp6I | CCWGG | 2 cut(s) | 396, 468 |
| PspGI | CCWGG | 2 cut(s) | 396, 468 |
| PspN4I | GGNNCC | 3 cut(s) | 33, 601, 643 |
| PspOMI | GGGCCC | 1 cut(s) | 599 |
| PspPI | GGNCC | 5 cut(s) | 394, 599, 600, 642, 815 |
| PspPPI | RGGWCCY | 1 cut(s) | 394 |
| PsuI | RGATCY | 1 cut(s) | 294 |
| PvuII | CAGCTG | 1 cut(s) | 344 |
| RruI | TCGCGA | 1 cut(s) | 251 |
| RsaI | GTAC | 1 cut(s) | 587 |
| RsaNI | GTAC | 1 cut(s) | 586 |
| RseI | CAYNNNNRTG | 1 cut(s) | 669 |
| SacI | GAGCTC | 1 cut(s) | 530 |
| SapI | GCTCTTC | 1 cut(s) | 860 |
| SaqAI | TTAA | 1 cut(s) | 204 |
| SatI | GCNGC | 9 cut(s) | 284, 301, 304, 342, 456, 459, 626, 818, 857 |
| Sau3AI | GATC | 7 cut(s) | 3, 67, 294, 440, 604, 609, 661 |
| Sau96I | GGNCC | 5 cut(s) | 394, 599, 600, 642, 815 |
| SchI | GAGTC | 1 cut(s) | 419 |
| ScrFI | CCNGG | 5 cut(s) | 145, 146, 398, 438, 470 |
| SduI | GDGCHC | 2 cut(s) | 530, 603 |
| SfoI | GGCGCC | 1 cut(s) | 33 |
| SfuI | TTCGAA | 1 cut(s) | 220 |
| SinI | GGWCC | 2 cut(s) | 394, 642 |
| SmaI | CCCGGG | 1 cut(s) | 146 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 669 |
| SmlI | CTYRAG | 1 cut(s) | 184 |
| SmoI | CTYRAG | 1 cut(s) | 184 |
| Sse9I | AATT | 1 cut(s) | 160 |
| SspDI | GGCGCC | 1 cut(s) | 31 |
| SstI | GAGCTC | 1 cut(s) | 530 |
| StyD4I | CCNGG | 5 cut(s) | 143, 144, 396, 436, 468 |
| TaaI | ACNGT | 4 cut(s) | 133, 229, 680, 735 |
| TaiI | ACGT | 3 cut(s) | 53, 87, 416 |
| TaqI | TCGA | 2 cut(s) | 220, 428 |
| TasI | AATT | 1 cut(s) | 160 |
| TatI | WGTACW | 1 cut(s) | 585 |
| TauI | GCSGC | 7 cut(s) | 303, 306, 458, 461, 628, 820, 859 |
| TfiI | GAWTC | 1 cut(s) | 433 |
| Tru1I | TTAA | 1 cut(s) | 204 |
| Tru9I | TTAA | 1 cut(s) | 204 |
| TscAI | CASTG | 2 cut(s) | 560, 685 |
| TseFI | GTSAC | 1 cut(s) | 674 |
| TseI | GCWGC | 2 cut(s) | 283, 341 |
| Tsp45I | GTSAC | 1 cut(s) | 674 |
| TspDTI | ATGAA | 4 cut(s) | 59, 309, 605, 848 |
| TspGWI | ACGGA | 1 cut(s) | 114 |
| TspMI | CCCGGG | 1 cut(s) | 144 |
| TspRI | CASTG | 2 cut(s) | 560, 685 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 61, 475 |
| VpaK11BI | GGWCC | 2 cut(s) | 394, 642 |
| XmaI | CCCGGG | 1 cut(s) | 144 |
| XmnI | GAANNNNTTC | 1 cut(s) | 50 |