F-box kelch-repeat protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| LRRNT_2 | PF08263 | 39 - 75 | 5e-13 | Leucine rich repeat N-terminal domain |
| LRR_8 | PF13855 | 271 - 329 | 2.3e-09 | Leucine rich repeat |
| LRR_14 | PF23598 | 371 - 539 | 1.4e-10 | Leucine-rich repeat region |
| LRR_8 | PF13855 | 396 - 452 | 5e-08 | Leucine rich repeat |
| LRR_14 | PF23598 | 821 - 915 | 1.6e-08 | Leucine-rich repeat region |
| LRR_8 | PF13855 | 860 - 899 | 1.2e-06 | Leucine rich repeat |
| LRR_4 | PF12799 | 865 - 901 | 4.9e-06 | Leucine Rich repeats (2 copies) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 339, 2688 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 990, 2665 |
| Acc16I | TGCGCA | 1 cut(s) | 1904 |
| AccBSI | CCGCTC | 1 cut(s) | 1206 |
| AccII | CGCG | 1 cut(s) | 126 |
| AccIII | TCCGGA | 1 cut(s) | 258 |
| AciI | CCGC | 4 cut(s) | 1206, 1526, 2079, 2775 |
| AclWI | GGATC | 6 cut(s) | 152, 221, 322, 2182, 2205, 2263 |
| AcoI | YGGCCR | 1 cut(s) | 2227 |
| AcuI | CTGAAG | 3 cut(s) | 2249, 2406, 2517 |
| AfaI | GTAC | 5 cut(s) | 7, 232, 979, 1102, 1193 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 533, 1219, 1580, 1789, 2362 |
| AgeI | ACCGGT | 1 cut(s) | 233 |
| AjnI | CCWGG | 2 cut(s) | 88, 2797 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1731, 1763, 2572, 2604 |
| Alw21I | GWGCWC | 3 cut(s) | 88, 416, 2883 |
| Alw26I | GTCTC | 6 cut(s) | 115, 887, 957, 1464, 2116, 2673 |
| AlwI | GGATC | 6 cut(s) | 152, 221, 322, 2182, 2205, 2263 |
| Aor13HI | TCCGGA | 1 cut(s) | 258 |
| AoxI | GGCC | 3 cut(s) | 39, 1792, 2227 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 935, 967 |
| AsiGI | ACCGGT | 1 cut(s) | 233 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 911, 1077, 2710 |
| AspLEI | GCGC | 3 cut(s) | 128, 1822, 1905 |
| AsuHPI | GGTGA | 5 cut(s) | 868, 1866, 2350, 2498, 2612 |
| AvaII | GGWCC | 9 cut(s) | 253, 319, 920, 1270, 1296, 1441, 1571, 1809, 1865 |
| AxyI | CCTNAGG | 2 cut(s) | 899, 1947 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 214, 247 |
| BalI | TGGCCA | 1 cut(s) | 2229 |
| BanII | GRGCYC | 3 cut(s) | 88, 416, 1226 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 160, 192, 2074, 2106 |
| BbsI | GAAGAC | 2 cut(s) | 606, 1125 |
| Bbv12I | GWGCWC | 3 cut(s) | 88, 416, 2883 |
| BbvCI | CCTCAGC | 1 cut(s) | 78 |
| BccI | CCATC | 3 cut(s) | 244, 1055, 2364 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2863, 2897 |
| BciT130I | CCWGG | 2 cut(s) | 90, 2799 |
| BciVI | GTATCC | 2 cut(s) | 2360, 2537 |
| BcoDI | GTCTC | 6 cut(s) | 115, 887, 957, 1464, 2116, 2673 |
| BfaI | CTAG | 5 cut(s) | 404, 858, 1124, 1340, 1575 |
| BfmI | CTRYAG | 2 cut(s) | 1187, 2201 |
| BfuI | GTATCC | 2 cut(s) | 2360, 2537 |
| BglII | AGATCT | 2 cut(s) | 1342, 1674 |
| BisI | GCNGC | 1 cut(s) | 1207 |
| BlpI | GCTNAGC | 1 cut(s) | 380 |
| BlsI | GCNGC | 1 cut(s) | 1208 |
| BmcAI | AGTACT | 1 cut(s) | 979 |
| Bme1390I | CCNGG | 2 cut(s) | 90, 2799 |
| Bme18I | GGWCC | 9 cut(s) | 253, 319, 920, 1270, 1296, 1441, 1571, 1809, 1865 |
| BmiI | GGNNCC | 3 cut(s) | 1297, 1524, 2781 |
| BmrFI | CCNGG | 2 cut(s) | 90, 2799 |
| BmsI | GCATC | 2 cut(s) | 1369, 1914 |
| BoxI | GACNNNNGTC | 4 cut(s) | 567, 1489, 1560, 2280 |
| BpiI | GAAGAC | 2 cut(s) | 606, 1125 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2623, 2655 |
| BpmI | CTGGAG | 4 cut(s) | 72, 711, 1956, 2805 |
| Bpu10I | CCTNAGC | 4 cut(s) | 78, 410, 1028, 1202 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 380 |
| BpuEI | CTTGAG | 1 cut(s) | 932 |
| BsaAI | YACGTR | 1 cut(s) | 583 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2355 |
| BsaJI | CCNNGG | 3 cut(s) | 2025, 2278, 2797 |
| BsaWI | WCCGGW | 2 cut(s) | 233, 258 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2552, 2582 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 533, 1219, 1580, 1789, 2362 |
| Bse118I | RCCGGY | 2 cut(s) | 233, 321 |
| Bse1I | ACTGG | 8 cut(s) | 23, 209, 272, 694, 879, 985, 1639, 2340 |
| Bse21I | CCTNAGG | 2 cut(s) | 899, 1947 |
| Bse3DI | GCAATG | 1 cut(s) | 1112 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2355 |
| BseAI | TCCGGA | 1 cut(s) | 258 |
| BseBI | CCWGG | 2 cut(s) | 90, 2799 |
| BseDI | CCNNGG | 3 cut(s) | 2025, 2278, 2797 |
| BseGI | GGATG | 6 cut(s) | 154, 268, 1066, 1620, 1905, 2744 |
| BseJI | GATNNNNATC | 1 cut(s) | 2355 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 533, 1219, 1580, 1789, 2362 |
| BseMI | GCAATG | 1 cut(s) | 1112 |
| BseMII | CTCAG | 8 cut(s) | 69, 401, 1193, 1288, 1619, 1930, 1938, 2654 |
| BseNI | ACTGG | 8 cut(s) | 23, 209, 272, 694, 879, 985, 1639, 2340 |
| BseRI | GAGGAG | 1 cut(s) | 708 |
| BsgI | GTGCAG | 1 cut(s) | 521 |
| Bsh1236I | CGCG | 1 cut(s) | 126 |
| BshFI | GGCC | 3 cut(s) | 41, 1794, 2229 |
| BshTI | ACCGGT | 1 cut(s) | 233 |
| BsiHKAI | GWGCWC | 3 cut(s) | 88, 416, 2883 |
| BsiSI | CCGG | 3 cut(s) | 234, 259, 322 |
| BslFI | GGGAC | 4 cut(s) | 1105, 1897, 2018, 2314 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 533, 1219, 1580, 1789, 2362 |
| BsmAI | GTCTC | 6 cut(s) | 115, 887, 957, 1464, 2116, 2673 |
| BsmBI | CGTCTC | 1 cut(s) | 115 |
| BsmFI | GGGAC | 4 cut(s) | 1105, 1897, 2018, 2314 |
| BsmI | GAATGC | 2 cut(s) | 1179, 2347 |
| BsnI | GGCC | 3 cut(s) | 41, 1794, 2229 |
| Bsp1286I | GDGCHC | 4 cut(s) | 88, 416, 1226, 2883 |
| Bsp13I | TCCGGA | 1 cut(s) | 258 |
| Bsp1407I | TGTACA | 1 cut(s) | 1100 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 380 |
| Bsp19I | CCATGG | 1 cut(s) | 2025 |
| BspACI | CCGC | 4 cut(s) | 1206, 1526, 2079, 2775 |
| BspANI | GGCC | 3 cut(s) | 41, 1794, 2229 |
| BspCNI | CTCAG | 8 cut(s) | 70, 402, 1194, 1287, 1618, 1929, 1939, 2653 |
| BspEI | TCCGGA | 1 cut(s) | 258 |
| BspFNI | CGCG | 1 cut(s) | 126 |
| BspLI | GGNNCC | 3 cut(s) | 1297, 1524, 2781 |
| BspMAI | CTGCAG | 1 cut(s) | 1191 |
| BspPI | GGATC | 6 cut(s) | 152, 221, 322, 2182, 2205, 2263 |
| BsrBI | CCGCTC | 1 cut(s) | 1206 |
| BsrDI | GCAATG | 1 cut(s) | 1112 |
| BsrFI | RCCGGY | 2 cut(s) | 233, 321 |
| BsrGI | TGTACA | 1 cut(s) | 1100 |
| BsrI | ACTGG | 8 cut(s) | 23, 209, 272, 694, 879, 985, 1639, 2340 |
| BssAI | RCCGGY | 2 cut(s) | 233, 321 |
| BssECI | CCNNGG | 3 cut(s) | 2025, 2278, 2797 |
| BssT1I | CCWWGG | 2 cut(s) | 2025, 2278 |
| Bst2UI | CCWGG | 2 cut(s) | 90, 2799 |
| Bst4CI | ACNGT | 6 cut(s) | 345, 2205, 2244, 2398, 2667, 2772 |
| Bst6I | CTCTTC | 3 cut(s) | 49, 652, 1684 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1900 |
| BstAUI | TGTACA | 1 cut(s) | 1100 |
| BstBAI | YACGTR | 1 cut(s) | 583 |
| BstC8I | GCNNGC | 2 cut(s) | 1025, 1892 |
| BstDSI | CCRYGG | 1 cut(s) | 2025 |
| BstF5I | GGATG | 6 cut(s) | 154, 268, 1066, 1620, 1905, 2744 |
| BstFNI | CGCG | 1 cut(s) | 126 |
| BstHHI | GCGC | 3 cut(s) | 128, 1822, 1905 |
| BstMAI | GTCTC | 6 cut(s) | 115, 887, 957, 1464, 2116, 2673 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 83, 1534, 1900, 1965, 2206 |
| BstNI | CCWGG | 2 cut(s) | 90, 2799 |
| BstNSI | RCATGY | 2 cut(s) | 713, 724 |
| BstPAI | GACNNNNGTC | 4 cut(s) | 567, 1489, 1560, 2280 |
| BstSCI | CCNGG | 2 cut(s) | 88, 2797 |
| BstSFI | CTRYAG | 2 cut(s) | 1187, 2201 |
| BstSNI | TACGTA | 1 cut(s) | 583 |
| BstUI | CGCG | 1 cut(s) | 126 |
| BstV2I | GAAGAC | 2 cut(s) | 606, 1125 |
| BstX2I | RGATCY | 5 cut(s) | 213, 1342, 1674, 2174, 2268 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1662 |
| BstYI | RGATCY | 5 cut(s) | 213, 1342, 1674, 2174, 2268 |
| Bsu36I | CCTNAGG | 2 cut(s) | 899, 1947 |
| BsuI | GTATCC | 2 cut(s) | 2360, 2537 |
| BsuRI | GGCC | 3 cut(s) | 41, 1794, 2229 |
| BtgI | CCRYGG | 1 cut(s) | 2025 |
| BtsCI | GGATG | 6 cut(s) | 154, 268, 1066, 1620, 1905, 2744 |
| BtsIMutI | CAGTG | 8 cut(s) | 16, 153, 202, 687, 1510, 2333, 2663, 2768 |
| Cac8I | GCNNGC | 2 cut(s) | 1025, 1892 |
| CfoI | GCGC | 3 cut(s) | 128, 1822, 1905 |
| Cfr10I | RCCGGY | 2 cut(s) | 233, 321 |
| CpoI | CGGWCCG | 1 cut(s) | 319 |
| CseI | GACGC | 1 cut(s) | 132 |
| Csp6I | GTAC | 5 cut(s) | 6, 231, 978, 1101, 1192 |
| CspAI | ACCGGT | 1 cut(s) | 233 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 768, 803, 1447, 1482 |
| CspI | CGGWCCG | 1 cut(s) | 319 |
| CviQI | GTAC | 5 cut(s) | 6, 231, 978, 1101, 1192 |
| DraI | TTTAAA | 1 cut(s) | 142 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 990, 2665 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 990, 2665 |
| EaeI | YGGCCR | 1 cut(s) | 2227 |
| Eam1104I | CTCTTC | 3 cut(s) | 49, 652, 1684 |
| EarI | CTCTTC | 3 cut(s) | 49, 652, 1684 |
| EciI | GGCGGA | 1 cut(s) | 1515 |
| Ecl136II | GAGCTC | 2 cut(s) | 86, 414 |
| Eco105I | TACGTA | 1 cut(s) | 583 |
| Eco130I | CCWWGG | 2 cut(s) | 2025, 2278 |
| Eco24I | GRGCYC | 3 cut(s) | 88, 416, 1226 |
| Eco47I | GGWCC | 9 cut(s) | 253, 319, 920, 1270, 1296, 1441, 1571, 1809, 1865 |
| Eco53kI | GAGCTC | 2 cut(s) | 86, 414 |
| Eco57I | CTGAAG | 3 cut(s) | 2249, 2406, 2517 |
| Eco81I | CCTNAGG | 2 cut(s) | 899, 1947 |
| EcoICRI | GAGCTC | 2 cut(s) | 86, 414 |
| EcoO109I | RGGNCCY | 3 cut(s) | 1441, 1571, 1865 |
| EcoRI | GAATTC | 6 cut(s) | 935, 996, 1940, 2430, 2634, 2706 |
| EcoRII | CCWGG | 2 cut(s) | 88, 2797 |
| EcoT14I | CCWWGG | 2 cut(s) | 2025, 2278 |
| EcoT22I | ATGCAT | 1 cut(s) | 110 |
| EcoT38I | GRGCYC | 3 cut(s) | 88, 416, 1226 |
| ErhI | CCWWGG | 2 cut(s) | 2025, 2278 |
| Esp3I | CGTCTC | 1 cut(s) | 115 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1608, 1640, 2695, 2727 |
| FaqI | GGGAC | 4 cut(s) | 1105, 1897, 2018, 2314 |
| FauI | CCCGC | 1 cut(s) | 2768 |
| FauNDI | CATATG | 3 cut(s) | 280, 1435, 1488 |
| Fnu4HI | GCNGC | 1 cut(s) | 1207 |
| FokI | GGATG | 6 cut(s) | 161, 255, 1073, 1607, 1892, 2731 |
| FriOI | GRGCYC | 3 cut(s) | 88, 416, 1226 |
| Fsp4HI | GCNGC | 1 cut(s) | 1207 |
| FspAI | RTGCGCAY | 1 cut(s) | 1904 |
| FspBI | CTAG | 5 cut(s) | 404, 858, 1124, 1340, 1575 |
| FspI | TGCGCA | 1 cut(s) | 1904 |
| GlaI | GCGC | 3 cut(s) | 127, 1821, 1904 |
| GluI | GCNGC | 1 cut(s) | 1207 |
| GsuI | CTGGAG | 4 cut(s) | 72, 711, 1956, 2805 |
| HaeIII | GGCC | 3 cut(s) | 41, 1794, 2229 |
| HapII | CCGG | 3 cut(s) | 234, 259, 322 |
| HgaI | GACGC | 1 cut(s) | 132 |
| HhaI | GCGC | 3 cut(s) | 128, 1822, 1905 |
| Hin6I | GCGC | 3 cut(s) | 126, 1820, 1903 |
| HinP1I | GCGC | 3 cut(s) | 126, 1820, 1903 |
| HincII | GTYRAC | 4 cut(s) | 24, 718, 1336, 2328 |
| HindII | GTYRAC | 4 cut(s) | 24, 718, 1336, 2328 |
| HindIII | AAGCTT | 3 cut(s) | 136, 1535, 1727 |
| HpaI | GTTAAC | 2 cut(s) | 24, 718 |
| HpaII | CCGG | 3 cut(s) | 234, 259, 322 |
| HphI | GGTGA | 5 cut(s) | 868, 1866, 2350, 2498, 2612 |
| Hpy166II | GTNNAC | 5 cut(s) | 24, 718, 1336, 1812, 2328 |
| Hpy8I | GTNNAC | 5 cut(s) | 24, 718, 1336, 1812, 2328 |
| HpyAV | CCTTC | 6 cut(s) | 171, 785, 1358, 2100, 2721, 2847 |
| HpyCH4III | ACNGT | 6 cut(s) | 345, 2205, 2244, 2398, 2667, 2772 |
| HpyCH4IV | ACGT | 1 cut(s) | 582 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 83, 1534, 1900, 1965, 2206 |
| HpySE526I | ACGT | 1 cut(s) | 582 |
| HspAI | GCGC | 3 cut(s) | 126, 1820, 1903 |
| Kpn2I | TCCGGA | 1 cut(s) | 258 |
| KspAI | GTTAAC | 2 cut(s) | 24, 718 |
| LmnI | GCTCC | 5 cut(s) | 83, 91, 1956, 1965, 2027 |
| LweI | GCATC | 2 cut(s) | 1369, 1914 |
| MaeI | CTAG | 5 cut(s) | 404, 858, 1124, 1340, 1575 |
| MaeII | ACGT | 1 cut(s) | 582 |
| MaeIII | GTNAC | 9 cut(s) | 151, 188, 200, 536, 1491, 1507, 2282, 2766, 2908 |
| MbiI | CCGCTC | 1 cut(s) | 1206 |
| MfeI | CAATTG | 1 cut(s) | 1558 |
| MflI | RGATCY | 5 cut(s) | 213, 1342, 1674, 2174, 2268 |
| MhlI | GDGCHC | 4 cut(s) | 88, 416, 1226, 2883 |
| MlsI | TGGCCA | 1 cut(s) | 2229 |
| MluNI | TGGCCA | 1 cut(s) | 2229 |
| MlyI | GAGTC | 3 cut(s) | 978, 1466, 1783 |
| MmeI | TCCRAC | 2 cut(s) | 2172, 2238 |
| Mox20I | TGGCCA | 1 cut(s) | 2229 |
| Mph1103I | ATGCAT | 1 cut(s) | 110 |
| MroI | TCCGGA | 1 cut(s) | 258 |
| MroXI | GAANNNNTTC | 3 cut(s) | 911, 1077, 2710 |
| MscI | TGGCCA | 1 cut(s) | 2229 |
| MseI | TTAA | 9 cut(s) | 23, 134, 141, 462, 480, 717, 1037, 2222, 2552 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1434 |
| Msp20I | TGGCCA | 1 cut(s) | 2229 |
| MspI | CCGG | 3 cut(s) | 234, 259, 322 |
| MspR9I | CCNGG | 2 cut(s) | 90, 2799 |
| MunI | CAATTG | 1 cut(s) | 1558 |
| Mva1269I | GAATGC | 2 cut(s) | 1179, 2347 |
| MvaI | CCWGG | 2 cut(s) | 90, 2799 |
| MvnI | CGCG | 1 cut(s) | 126 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 83, 1534, 1900, 1965, 2206 |
| NcoI | CCATGG | 1 cut(s) | 2025 |
| NdeI | CATATG | 3 cut(s) | 280, 1435, 1488 |
| NlaIV | GGNNCC | 3 cut(s) | 1297, 1524, 2781 |
| NmuCI | GTSAC | 6 cut(s) | 151, 200, 1491, 2282, 2766, 2908 |
| NsbI | TGCGCA | 1 cut(s) | 1904 |
| NsiI | ATGCAT | 1 cut(s) | 110 |
| NspI | RCATGY | 2 cut(s) | 713, 724 |
| PctI | GAATGC | 2 cut(s) | 1179, 2347 |
| PdmI | GAANNNNTTC | 3 cut(s) | 911, 1077, 2710 |
| PfoI | TCCNGGA | 1 cut(s) | 88 |
| PinAI | ACCGGT | 1 cut(s) | 233 |
| PkrI | GCNGC | 1 cut(s) | 1208 |
| PleI | GAGTC | 3 cut(s) | 978, 1466, 1782 |
| PpsI | GAGTC | 3 cut(s) | 978, 1466, 1782 |
| Ppu21I | YACGTR | 1 cut(s) | 583 |
| PpuMI | RGGWCCY | 3 cut(s) | 1441, 1571, 1865 |
| PshAI | GACNNNNGTC | 4 cut(s) | 567, 1489, 1560, 2280 |
| PsiI | TTATAA | 2 cut(s) | 339, 2688 |
| Psp124BI | GAGCTC | 2 cut(s) | 88, 416 |
| Psp5II | RGGWCCY | 3 cut(s) | 1441, 1571, 1865 |
| Psp6I | CCWGG | 2 cut(s) | 88, 2797 |
| PspGI | CCWGG | 2 cut(s) | 88, 2797 |
| PspN4I | GGNNCC | 3 cut(s) | 1297, 1524, 2781 |
| PspPPI | RGGWCCY | 3 cut(s) | 1441, 1571, 1865 |
| PstI | CTGCAG | 1 cut(s) | 1191 |
| PsuI | RGATCY | 5 cut(s) | 213, 1342, 1674, 2174, 2268 |
| RsaI | GTAC | 5 cut(s) | 7, 232, 979, 1102, 1193 |
| RsaNI | GTAC | 5 cut(s) | 6, 231, 978, 1101, 1192 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1434 |
| Rsr2I | CGGWCCG | 1 cut(s) | 319 |
| RsrII | CGGWCCG | 1 cut(s) | 319 |
| SacI | GAGCTC | 2 cut(s) | 88, 416 |
| SaqAI | TTAA | 9 cut(s) | 23, 134, 141, 462, 480, 717, 1037, 2222, 2552 |
| SatI | GCNGC | 1 cut(s) | 1207 |
| ScaI | AGTACT | 1 cut(s) | 979 |
| SchI | GAGTC | 3 cut(s) | 978, 1466, 1783 |
| ScrFI | CCNGG | 2 cut(s) | 90, 2799 |
| SduI | GDGCHC | 4 cut(s) | 88, 416, 1226, 2883 |
| SfaNI | GCATC | 2 cut(s) | 1369, 1914 |
| SfcI | CTRYAG | 2 cut(s) | 1187, 2201 |
| SinI | GGWCC | 9 cut(s) | 253, 319, 920, 1270, 1296, 1441, 1571, 1809, 1865 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1434 |
| SmlI | CTYRAG | 1 cut(s) | 947 |
| SmoI | CTYRAG | 1 cut(s) | 947 |
| SnaBI | TACGTA | 1 cut(s) | 583 |
| SsiI | CCGC | 4 cut(s) | 1206, 1526, 2079, 2775 |
| SspI | AATATT | 2 cut(s) | 1694, 2052 |
| SspMI | CTAG | 5 cut(s) | 404, 858, 1124, 1340, 1575 |
| SstI | GAGCTC | 2 cut(s) | 88, 416 |
| StyD4I | CCNGG | 2 cut(s) | 88, 2797 |
| StyI | CCWWGG | 2 cut(s) | 2025, 2278 |
| TaaI | ACNGT | 6 cut(s) | 345, 2205, 2244, 2398, 2667, 2772 |
| TaiI | ACGT | 1 cut(s) | 585 |
| TaqI | TCGA | 8 cut(s) | 416, 974, 994, 1446, 1475, 2421, 2471, 2540 |
| TaqII | GACCGA | 1 cut(s) | 2827 |
| TatI | WGTACW | 2 cut(s) | 977, 1100 |
| TauI | GCSGC | 1 cut(s) | 1209 |
| Tru1I | TTAA | 9 cut(s) | 23, 134, 141, 462, 480, 717, 1037, 2222, 2552 |
| Tru9I | TTAA | 9 cut(s) | 23, 134, 141, 462, 480, 717, 1037, 2222, 2552 |
| TscAI | CASTG | 8 cut(s) | 23, 160, 209, 694, 1510, 2340, 2670, 2775 |
| TseFI | GTSAC | 6 cut(s) | 151, 200, 1491, 2282, 2766, 2908 |
| Tsp45I | GTSAC | 6 cut(s) | 151, 200, 1491, 2282, 2766, 2908 |
| TspGWI | ACGGA | 3 cut(s) | 687, 1722, 2754 |
| TspRI | CASTG | 8 cut(s) | 23, 160, 209, 694, 1510, 2340, 2670, 2775 |
| VpaK11BI | GGWCC | 9 cut(s) | 253, 319, 920, 1270, 1296, 1441, 1571, 1809, 1865 |
| XceI | RCATGY | 2 cut(s) | 713, 724 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2443 |
| XmnI | GAANNNNTTC | 3 cut(s) | 911, 1077, 2710 |
| XspI | CTAG | 5 cut(s) | 404, 858, 1124, 1340, 1575 |
| ZrmI | AGTACT | 1 cut(s) | 979 |
| Zsp2I | ATGCAT | 1 cut(s) | 110 |