FvH4_2g29542

serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Reverse (-)
22876044 .. 22881481
5438 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g29542.t1

Sequence Viewer

Length: 2397 bp
ATGGCCATGTTTCTTCCTTTCATTTGCTTGACATTTCTTAGCTGCTTTTCGTTTTCATCACTTGCAACAGACACACTTACACCTTCAGACACATTGAGGGGCAGTCAAACCCTGGTTTCAGCTGGTGGAGTTTTCGTGCTTGGCCTATTCAATGAAAGCTCTTCAGGTTATTACTATCTGGGAATTTGGTTCAAAGCTGATGCAAACAAGGTTGTCTGGGTAGACCGCGAAAACCCCATAATGGATTCATCTGGCGTGGTTCAAATCCGGTCTGGGAATTTGGTTCTCACAGACCGTCGACAAGTGCTACTGATAGTCAACACAGGAAGTCTTTCCACCACTACAACCAACACAAGCGCAACACTTCTTGATACTGGAAACTTGGTCCTCAAGGAAGCAGATTCAGGTACTACTATATGGCAGAGTTTTGATATTCCGACTGATACTTTTCTCCCTGGGATGAAGATTGGGCTATTTGGACTAAACACAACCCTGCAAACCTTTCACATTCTTGTTTCTTGGGCAAGTCCCCAAAACCCGATCCGTGGCCTATTTACCTTAAGCATTGATGCCAACGATCACACTAGGATTTCGGTTTGGCGAGGAGATGGAGCTGTGATGGATGTTGGTTTTTGGAATGGAAATGGCTTACGGTTTATTTTTGAGAACTCATCTGCTGGGAATATGTACAATTTCAGTTTCCAGTCCAATGGATCTGATGCCTTCTACACTTTTAGCACCCCGAAGAACTATGACCTGATGTGGTTTGTGATGGCTTCAACAGGAACGCTGGACCAGTATCTTATGCTGGATGGGAAGATTTCTAATGTGAGTCATGCTTTGTGTGAAGATTCAAATGGTGGAAATACTGGGAGGTGCTTGACTTCACTACCATCTATGTGTGACAATGATGGTAAATTTTCTGAGATGAATGGCTTGCTGCCATCTAACACTAGTAATGATTCCACCTATTTGTGGACTGCTGATTGTGAAACACTGTGCAAAAACAATTGTTCCTGTACTGCATTCACTTCACTTGAGAATGGACAATCAGGATGCCAACTTTATTTTGGGAGCAAACAAAATCTATTGATGATTGTAGAGAAGGGCGCGGGGGTTATTTACATCCGCAGTGGTGATTCAAGTGATGGTAAGCAGTGGAAGCTCTGGTTGTCAGTCGCAGTTCCTTTGGGTTCCCTCTTGATTTCTATTTCAATCTCGTTCTACTGGTATATGCGTTGCAGAAGGAAACGTAAAGAAGATCAAGTAACCAAACGAGAATCTGATCAAGCAAGGTTATTCCAAATGTGCTCCAATGATGCATCGCCTATACAACTCAATGAAGCTAGAAGTGCAAATAACATGGAATTAGGCAGACAGAAAGACCAAGATCTACCGTTTTTTAGTTTTTCTGCAATTAAGACTGCAACTGATTACTTTGCAGAGTCTAATAAGCTTGGGGAAGGTGGATATGGGCCTGTGTATAAGGGTAAGTTGCTTCAAGAAGGACAAGAAATTGCAGTGAAAAGGCTTTCGAAAATTTCCAGGCAAGGATTGGAGGAGTTCAAGAACGAAGTCTCGGTAATTTGTAAGCTTCAACACAGGAATTTGGTTAGGCTTTTGGGATGCTGCATTGAAGCAGAAGAAAGCATACTAATATATGAGTTCATGCCCAACAATAGTCTGAATTCCTTCATCTTTGATTCAAGCAAACATGTACTTTTGGACTGGGAGAGGCGCATGAGCATTATTGAAGGGATTGCTCAAGGTCTTCTGTATCTTCACAAATACTCAAGATTAAGGATCATTCACCGTGATTTAAAGACGAGCAATATTCTACTTGACTGTGACCTGAACCCAAAAATTTCAGATTTTGGCATGGCAAGAATTGTTGGCGACAATGACATAAGGGGACAAACAAAACGGGTTGTTGGTACAATTGGTTACATGTCTCCGGAATATGCCATGGACGGACTCTTTTCTGAAAAATCAGATGTGTTCAGCTTTGGGGTGATCATATTAGAGGTCATAAGTGGAAAGAAGAACATTGCCTTTTTTGATGTTGATCAGTCTCAAAACCTACTTGGCAGGGCTTGGAATTTGTGGAAAGATGGCAATGGACTGGGGTTGTTGGATTCAGCACTGCATGCTTCTTGTTCAAGCAATGAAGTTATGAGATGCATTCAGATCGGCCTTCTATGCGTTCAAGAAAGGGCCATTGATCGGCCGTACATGTCAGATGTCATTTTTATGCTAAGCAATGAATCAATTGCTCTGCCTCATCCCAAAGAACCTGCATTTTTAAGTCAGTTCTGCGCAGATGCAGATTCATCTTCAAGCAGGCAAAGATATTACTCTAAAAATGATATAACCATGTCACAAGTAGATGCCAGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

799

Amino Acids

88.85

Weight (kDa)

5.51

Isoelectric Point (pI)

42.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 71 - 174 9.1e-25 D-mannose binding lectin
Pkinase PF00069 481 - 682 8.8e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 483 - 686 1.6e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000509)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g29542 FvH4_2g29543 FvH4_2g29543 FvH4_2g29543 FvH4_2g29543 FvH4_2g29544 FvH4_2g29545 FvH4_2g29545 FvH4_2g29545 FvH4_2g29545 FvH4_2g29545 FvH4_2g29560
malus_domestica MD15G1121300.v1.1
prunus_persica Prupe.1G473900_v2.0.a1 Prupe.1G474000_v2.0.a1 Prupe.1G474000_v2.0.a1 Prupe.1G474000_v2.0.a1 Prupe.1G474000_v2.0.a1 Prupe.1G474100_v2.0.a1 Prupe.1G474300_v2.0.a1 Prupe.1G474500_v2.0.a1
rosa_chinensis RchiOBHm_Chr6g0298411 RchiOBHm_Chr6g0298421 RchiOBHm_Chr6g0298431 RchiOBHm_Chr6g0298441 RchiOBHm_Chr6g0298451 RchiOBHm_Chr6g0298461 RchiOBHm_Chr6g0298471 RchiOBHm_Chr6g0298481 RchiOBHm_Chr6g0298491 RchiOBHm_Chr6g0298501 RchiOBHm_Chr6g0298521
rosa_laevigata RLG00000011506 RLG00000011508 RLG00000011509 RLG00000011511 RLG00000011513 RLG00000011514 RLG00000011515
rosa_multiflora Rmu_co8314937.1_g000001 Rmu_co8319199.1_g000001 Rmu_sc0004500.1_g000002 Rmu_sc0006543.1_g000001 Rmu_ssc0000289.1_g000039 Rmu_ssc0000289.1_g000040 Rmu_ssc0000289.1_g000047 Rmu_ssc0000289.1_g000048 Rmu_ssc0000289.1_g000049 Rmu_ssc0000289.1_g000051
rosa_roxburghii Rroxscaffold_7G00169570 Rroxscaffold_7G00169580 Rroxscaffold_7G00169600 Rroxscaffold_7G00169610 Rroxscaffold_7G00169620 Rroxscaffold_7G00169630 Rroxscaffold_7G00169650 Rroxscaffold_7G00169660 Rroxscaffold_7G00169670
rosa_rugosa Rorug06G0280700 Rorug06G0280800 Rorug06G0280900
rosa_samantha Rh6AG391700 Rh6AG391800 Rh6AG392000 Rh6AG392100 Rh6AG392200 Rh6BG399300 Rh6BG399400 Rh6BG399500 Rh6BG399700 Rh6BG400000 Rh6CG405400 Rh6CG405500 Rh6CG405600 Rh6CG405700 Rh6CG405800 Rh6DG391800 Rh6DG391900 Rh6DG392000 Rh6DG392100 Rh6DG392300
rosa_wichuraiana Rw6G034230 Rw6G034240 Rw6G034250 Rw6G034260 Rw6G034270 Rw6G034280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 2317
Acc36I ACCTGC 1 cut(s) 2302
AccI GTMKAC 2 cut(s) 222, 298
AccII CGCG 2 cut(s) 228, 1112
AccIII TCCGGA 1 cut(s) 1954
AciI CCGC 3 cut(s) 226, 1112, 1129
AclWI GGATC 3 cut(s) 535, 721, 1811
AcoI YGGCCR 2 cut(s) 3, 2225
AcsI RAATTY 8 cut(s) 183, 277, 917, 1539, 1606, 1687, 1863, 2098
AcuI CTGAAG 2 cut(s) 69, 147
AfaI GTAC 6 cut(s) 409, 689, 1021, 1719, 1936, 2231
AfiI CCNNNNNNNGG 4 cut(s) 241, 545, 975, 2223
AflII CTTAAG 1 cut(s) 559
AflIII ACRYGT 3 cut(s) 1714, 1947, 2232
AhlI ACTAGT 1 cut(s) 953
AjnI CCWGG 4 cut(s) 111, 454, 1544, 2390
Alw21I GWGCWC 1 cut(s) 1313
Alw26I GTCTC 3 cut(s) 1582, 1956, 2076
AlwI GGATC 3 cut(s) 535, 721, 1811
Aor13HI TCCGGA 1 cut(s) 1954
AoxI GGCC 7 cut(s) 3, 142, 547, 1475, 2191, 2214, 2225
ApeKI GCWGC 3 cut(s) 42, 940, 1629
ApoI RAATTY 8 cut(s) 183, 277, 917, 1539, 1606, 1687, 1863, 2098
Asp700I GAANNNNTTC 2 cut(s) 331, 1691
AspLEI GCGC 4 cut(s) 359, 1112, 1740, 2318
AspS9I GGNCC 4 cut(s) 385, 793, 1475, 2214
AsuHPI GGTGA 3 cut(s) 1148, 1802, 2023
AsuII TTCGAA 1 cut(s) 1535
AvaII GGWCC 2 cut(s) 385, 793
BalI TGGCCA 1 cut(s) 5
BarI GAAGNNNNNNTAC 2 cut(s) 1635, 1667
BbsI GAAGAC 1 cut(s) 1763
Bbv12I GWGCWC 1 cut(s) 1313
BbvI GCAGC 3 cut(s) 29, 927, 1616
BccI CCATC 9 cut(s) 602, 613, 766, 806, 901, 905, 952, 1142, 2105
BceAI ACGGC 1 cut(s) 2212
BcgI CGANNNNNNTGC 2 cut(s) 2170, 2204
BciT130I CCWGG 4 cut(s) 113, 456, 1546, 2392
BclI TGATCA 3 cut(s) 1285, 2013, 2065
BcoDI GTCTC 3 cut(s) 1582, 1956, 2076
BcuI ACTAGT 1 cut(s) 953
BfaI CTAG 3 cut(s) 585, 954, 1347
BfrI CTTAAG 1 cut(s) 559
BfuAI ACCTGC 1 cut(s) 2302
BglII AGATCT 1 cut(s) 1390
BisI GCNGC 3 cut(s) 43, 941, 1630
BlpI GCTNAGC 1 cut(s) 2255
BlsI GCNGC 3 cut(s) 44, 942, 1631
Bme1390I CCNGG 4 cut(s) 113, 456, 1546, 2392
Bme18I GGWCC 2 cut(s) 385, 793
BmgT120I GGNCC 4 cut(s) 385, 793, 1475, 2214
BmiI GGNNCC 1 cut(s) 1195
BmrFI CCNGG 4 cut(s) 113, 456, 1546, 2392
BmrI ACTGGG 3 cut(s) 879, 1738, 2132
BmuI ACTGGG 3 cut(s) 879, 1738, 2132
BpiI GAAGAC 1 cut(s) 1763
Bpu1102I GCTNAGC 1 cut(s) 2255
Bpu14I TTCGAA 1 cut(s) 1535
BpuEI CTTGAG 4 cut(s) 374, 1058, 1749, 1777
BsaBI GATNNNNATC 1 cut(s) 2064
BsaJI CCNNGG 5 cut(s) 111, 454, 455, 544, 1965
BsaWI WCCGGW 2 cut(s) 267, 1954
BsaXI ACNNNNNCTCC 2 cut(s) 120, 150
Bsc4I CCNNNNNNNGG 4 cut(s) 241, 545, 975, 2223
Bse1I ACTGG 7 cut(s) 379, 703, 796, 874, 1232, 1733, 2127
Bse3DI GCAATG 4 cut(s) 2046, 2122, 2170, 2266
Bse8I GATNNNNATC 1 cut(s) 2064
BseAI TCCGGA 1 cut(s) 1954
BseBI CCWGG 4 cut(s) 113, 456, 1546, 2392
BseDI CCNNGG 5 cut(s) 111, 454, 455, 544, 1965
BseGI GGATG 7 cut(s) 465, 628, 817, 1061, 1125, 1631, 2281
BseJI GATNNNNATC 1 cut(s) 2064
BseLI CCNNNNNNNGG 4 cut(s) 241, 545, 975, 2223
BseMI GCAATG 4 cut(s) 2046, 2122, 2170, 2266
BseMII CTCAG 1 cut(s) 915
BseNI ACTGG 7 cut(s) 379, 703, 796, 874, 1232, 1733, 2127
BseRI GAGGAG 2 cut(s) 618, 1574
BseX3I CGGCCG 1 cut(s) 2225
BseXI GCAGC 3 cut(s) 29, 927, 1616
BseYI CCCAGC 1 cut(s) 677
Bsh1236I CGCG 2 cut(s) 228, 1112
Bsh1285I CGRYCG 1 cut(s) 2228
BshFI GGCC 7 cut(s) 5, 144, 549, 1477, 2193, 2216, 2227
BsiEI CGRYCG 1 cut(s) 2228
BsiHKAI GWGCWC 1 cut(s) 1313
BsiSI CCGG 2 cut(s) 268, 1955
BslFI GGGAC 2 cut(s) 513, 1926
BslI CCNNNNNNNGG 4 cut(s) 241, 545, 975, 2223
BsmAI GTCTC 3 cut(s) 1582, 1956, 2076
BsmFI GGGAC 2 cut(s) 513, 1926
BsmI GAATGC 2 cut(s) 1025, 2181
BsnI GGCC 7 cut(s) 5, 144, 549, 1477, 2193, 2216, 2227
Bsp119I TTCGAA 1 cut(s) 1535
Bsp1286I GDGCHC 1 cut(s) 1313
Bsp13I TCCGGA 1 cut(s) 1954
Bsp1407I TGTACA 1 cut(s) 687
Bsp1720I GCTNAGC 1 cut(s) 2255
Bsp19I CCATGG 1 cut(s) 1965
BspACI CCGC 3 cut(s) 226, 1112, 1129
BspANI GGCC 7 cut(s) 5, 144, 549, 1477, 2193, 2216, 2227
BspCNI CTCAG 1 cut(s) 916
BspEI TCCGGA 1 cut(s) 1954
BspFNI CGCG 2 cut(s) 228, 1112
BspLI GGNNCC 1 cut(s) 1195
BspMI ACCTGC 1 cut(s) 2302
BspPI GGATC 3 cut(s) 535, 721, 1811
BspQI GCTCTTC 1 cut(s) 166
BspT104I TTCGAA 1 cut(s) 1535
BspTI CTTAAG 1 cut(s) 559
BsrDI GCAATG 4 cut(s) 2046, 2122, 2170, 2266
BsrGI TGTACA 1 cut(s) 687
BsrI ACTGG 7 cut(s) 379, 703, 796, 874, 1232, 1733, 2127
BssECI CCNNGG 5 cut(s) 111, 454, 455, 544, 1965
BssT1I CCWWGG 1 cut(s) 1965
Bst2UI CCWGG 4 cut(s) 113, 456, 1546, 2392
Bst4CI ACNGT 6 cut(s) 296, 654, 999, 1398, 1814, 1847
Bst6I CTCTTC 1 cut(s) 166
BstAFI CTTAAG 1 cut(s) 559
BstAPI GCANNNNNTGC 1 cut(s) 2147
BstAUI TGTACA 1 cut(s) 687
BstBI TTCGAA 1 cut(s) 1535
BstC8I GCNNGC 3 cut(s) 938, 2148, 2342
BstDEI CTNAG 3 cut(s) 38, 924, 2255
BstDSI CCRYGG 2 cut(s) 544, 1965
BstF5I GGATG 7 cut(s) 465, 628, 817, 1061, 1125, 1631, 2281
BstFNI CGCG 2 cut(s) 228, 1112
BstHHI GCGC 4 cut(s) 359, 1112, 1740, 2318
BstMAI GTCTC 3 cut(s) 1582, 1956, 2076
BstMCI CGRYCG 1 cut(s) 2228
BstMWI GCNNNNNNNGC 4 cut(s) 1162, 1352, 2147, 2199
BstNI CCWGG 4 cut(s) 113, 456, 1546, 2392
BstNSI RCATGY 4 cut(s) 1718, 1951, 2150, 2236
BstSCI CCNGG 4 cut(s) 111, 454, 1544, 2390
BstUI CGCG 2 cut(s) 228, 1112
BstV1I GCAGC 3 cut(s) 29, 927, 1616
BstV2I GAAGAC 1 cut(s) 1763
BstX2I RGATCY 2 cut(s) 713, 1390
BstXI CCANNNNNNTGG 1 cut(s) 710
BstYI RGATCY 2 cut(s) 713, 1390
BstZI CGGCCG 1 cut(s) 2225
BsuRI GGCC 7 cut(s) 5, 144, 549, 1477, 2193, 2216, 2227
BtgI CCRYGG 2 cut(s) 544, 1965
BtgZI GCGATG 1 cut(s) 1308
BtsCI GGATG 7 cut(s) 465, 628, 817, 1061, 1125, 1631, 2281
BtsI GCAGTG 4 cut(s) 1138, 1163, 1527, 2141
BtsIMutI CAGTG 5 cut(s) 995, 1138, 1163, 1527, 2141
BveI ACCTGC 1 cut(s) 2302
Cac8I GCNNGC 3 cut(s) 938, 2148, 2342
CfoI GCGC 4 cut(s) 359, 1112, 1740, 2318
Cfr13I GGNCC 4 cut(s) 385, 793, 1475, 2214
Csp6I GTAC 6 cut(s) 408, 688, 1020, 1718, 1935, 2230
CviQI GTAC 6 cut(s) 408, 688, 1020, 1718, 1935, 2230
DdeI CTNAG 3 cut(s) 38, 924, 2255
DraI TTTAAA 1 cut(s) 1821
EaeI YGGCCR 2 cut(s) 3, 2225
EagI CGGCCG 1 cut(s) 2225
Eam1104I CTCTTC 1 cut(s) 166
EarI CTCTTC 1 cut(s) 166
EclXI CGGCCG 1 cut(s) 2225
Eco130I CCWWGG 1 cut(s) 1965
Eco47I GGWCC 2 cut(s) 385, 793
Eco52I CGGCCG 1 cut(s) 2225
Eco57I CTGAAG 2 cut(s) 69, 147
EcoRI GAATTC 1 cut(s) 1687
EcoRII CCWGG 4 cut(s) 111, 454, 1544, 2390
EcoT14I CCWWGG 1 cut(s) 1965
EcoT22I ATGCAT 2 cut(s) 1324, 2183
ErhI CCWWGG 1 cut(s) 1965
FaqI GGGAC 2 cut(s) 513, 1926
FauI CCCGC 1 cut(s) 1105
FbaI TGATCA 3 cut(s) 1285, 2013, 2065
FblI GTMKAC 2 cut(s) 222, 298
Fnu4HI GCNGC 3 cut(s) 43, 941, 1630
FokI GGATG 7 cut(s) 472, 635, 824, 1068, 1112, 1638, 2268
Fsp4HI GCNGC 3 cut(s) 43, 941, 1630
FspBI CTAG 3 cut(s) 585, 954, 1347
FspI TGCGCA 1 cut(s) 2317
GlaI GCGC 4 cut(s) 358, 1111, 1739, 2317
GluI GCNGC 3 cut(s) 43, 941, 1630
GsaI CCCAGC 1 cut(s) 681
HaeIII GGCC 7 cut(s) 5, 144, 549, 1477, 2193, 2216, 2227
HapII CCGG 2 cut(s) 268, 1955
HhaI GCGC 4 cut(s) 359, 1112, 1740, 2318
Hin6I GCGC 4 cut(s) 357, 1110, 1738, 2316
HinP1I GCGC 4 cut(s) 357, 1110, 1738, 2316
HincII GTYRAC 2 cut(s) 299, 319
HindII GTYRAC 2 cut(s) 299, 319
HindIII AAGCTT 2 cut(s) 1454, 1592
HpaII CCGG 2 cut(s) 268, 1955
HphI GGTGA 3 cut(s) 1148, 1802, 2023
Hpy166II GTNNAC 4 cut(s) 223, 299, 319, 978
Hpy188III TCNNGA 8 cut(s) 368, 1053, 1201, 1502, 1567, 1794, 1955, 2207
Hpy8I GTNNAC 4 cut(s) 223, 299, 319, 978
Hpy99I CGWCG 1 cut(s) 300
HpyAV CCTTC 9 cut(s) 93, 733, 1099, 1239, 1457, 1499, 1702, 1748, 2204
HpyCH4III ACNGT 6 cut(s) 296, 654, 999, 1398, 1814, 1847
HpyCH4IV ACGT 1 cut(s) 1252
HpyF10VI GCNNNNNNNGC 4 cut(s) 1162, 1352, 2147, 2199
HpyF3I CTNAG 3 cut(s) 38, 924, 2255
HpySE526I ACGT 1 cut(s) 1252
HspAI GCGC 4 cut(s) 357, 1110, 1738, 2316
Kpn2I TCCGGA 1 cut(s) 1954
Ksp22I TGATCA 3 cut(s) 1285, 2013, 2065
LguI GCTCTTC 1 cut(s) 166
LmnI GCTCC 3 cut(s) 611, 1074, 1316
Lsp1109I GCAGC 3 cut(s) 29, 927, 1616
MaeI CTAG 3 cut(s) 585, 954, 1347
MaeII ACGT 1 cut(s) 1252
MaeIII GTNAC 5 cut(s) 902, 1267, 1847, 1943, 2376
MfeI CAATTG 3 cut(s) 1009, 1938, 2268
MflI RGATCY 2 cut(s) 713, 1390
MhlI GDGCHC 1 cut(s) 1313
MlsI TGGCCA 1 cut(s) 5
MluNI TGGCCA 1 cut(s) 5
MlyI GAGTC 3 cut(s) 841, 1454, 1968
MmeI TCCRAC 2 cut(s) 461, 2112
MnlI CCTC 9 cut(s) 90, 398, 596, 867, 1208, 1552, 1728, 2017, 2289
Mox20I TGGCCA 1 cut(s) 5
Mph1103I ATGCAT 2 cut(s) 1324, 2183
MroI TCCGGA 1 cut(s) 1954
MroXI GAANNNNTTC 2 cut(s) 331, 1691
MscI TGGCCA 1 cut(s) 5
MseI TTAA 5 cut(s) 560, 1419, 1799, 1820, 2303
MslI CAYNNNNRTG 2 cut(s) 898, 2249
Msp20I TGGCCA 1 cut(s) 5
MspA1I CMGCKG 1 cut(s) 122
MspCI CTTAAG 1 cut(s) 559
MspI CCGG 2 cut(s) 268, 1955
MspR9I CCNGG 4 cut(s) 113, 456, 1546, 2392
MunI CAATTG 3 cut(s) 1009, 1938, 2268
Mva1269I GAATGC 2 cut(s) 1025, 2181
MvaI CCWGG 4 cut(s) 113, 456, 1546, 2392
MvnI CGCG 2 cut(s) 228, 1112
MwoI GCNNNNNNNGC 4 cut(s) 1162, 1352, 2147, 2199
NcoI CCATGG 1 cut(s) 1965
NlaIV GGNNCC 1 cut(s) 1195
NmuCI GTSAC 3 cut(s) 902, 1847, 2376
NsbI TGCGCA 1 cut(s) 2317
NsiI ATGCAT 2 cut(s) 1324, 2183
NspI RCATGY 4 cut(s) 1718, 1951, 2150, 2236
NspV TTCGAA 1 cut(s) 1535
PaeI GCATGC 1 cut(s) 2150
PasI CCCWGGG 1 cut(s) 455
PciI ACATGT 3 cut(s) 1714, 1947, 2232
PciSI GCTCTTC 1 cut(s) 166
PctI GAATGC 2 cut(s) 1025, 2181
PdmI GAANNNNTTC 2 cut(s) 331, 1691
PkrI GCNGC 3 cut(s) 44, 942, 1631
PleI GAGTC 3 cut(s) 840, 1453, 1968
PpsI GAGTC 3 cut(s) 840, 1453, 1968
PscI ACATGT 3 cut(s) 1714, 1947, 2232
Psp6I CCWGG 4 cut(s) 111, 454, 1544, 2390
PspFI CCCAGC 1 cut(s) 677
PspGI CCWGG 4 cut(s) 111, 454, 1544, 2390
PspN4I GGNNCC 1 cut(s) 1195
PspPI GGNCC 4 cut(s) 385, 793, 1475, 2214
PsuI RGATCY 2 cut(s) 713, 1390
PvuII CAGCTG 1 cut(s) 122
RsaI GTAC 6 cut(s) 409, 689, 1021, 1719, 1936, 2231
RsaNI GTAC 6 cut(s) 408, 688, 1020, 1718, 1935, 2230
RseI CAYNNNNRTG 2 cut(s) 898, 2249
SalI GTCGAC 1 cut(s) 297
SapI GCTCTTC 1 cut(s) 166
SaqAI TTAA 5 cut(s) 560, 1419, 1799, 1820, 2303
SatI GCNGC 3 cut(s) 43, 941, 1630
Sau96I GGNCC 4 cut(s) 385, 793, 1475, 2214
SchI GAGTC 3 cut(s) 841, 1454, 1968
ScrFI CCNGG 4 cut(s) 113, 456, 1546, 2392
SduI GDGCHC 1 cut(s) 1313
SfuI TTCGAA 1 cut(s) 1535
SinI GGWCC 2 cut(s) 385, 793
SmiMI CAYNNNNRTG 2 cut(s) 898, 2249
SmlI CTYRAG 5 cut(s) 389, 559, 1037, 1764, 1792
SmoI CTYRAG 5 cut(s) 389, 559, 1037, 1764, 1792
SpeI ACTAGT 1 cut(s) 953
SphI GCATGC 1 cut(s) 2150
SsiI CCGC 3 cut(s) 226, 1112, 1129
SspI AATATT 1 cut(s) 1834
SspMI CTAG 3 cut(s) 585, 954, 1347
StyD4I CCNGG 4 cut(s) 111, 454, 1544, 2390
StyI CCWWGG 1 cut(s) 1965
TaaI ACNGT 6 cut(s) 296, 654, 999, 1398, 1814, 1847
TaiI ACGT 1 cut(s) 1255
TaqI TCGA 2 cut(s) 298, 1535
TatI WGTACW 3 cut(s) 687, 1019, 1717
Tru1I TTAA 5 cut(s) 560, 1419, 1799, 1820, 2303
Tru9I TTAA 5 cut(s) 560, 1419, 1799, 1820, 2303
TscAI CASTG 5 cut(s) 1002, 1138, 1163, 1527, 2148
TseFI GTSAC 3 cut(s) 902, 1847, 2376
TseI GCWGC 3 cut(s) 42, 940, 1629
Tsp45I GTSAC 3 cut(s) 902, 1847, 2376
TspGWI ACGGA 2 cut(s) 533, 1986
TspRI CASTG 5 cut(s) 1002, 1138, 1163, 1527, 2148
Vha464I CTTAAG 1 cut(s) 559
VpaK11BI GGWCC 2 cut(s) 385, 793
XapI RAATTY 8 cut(s) 183, 277, 917, 1539, 1606, 1687, 1863, 2098
XceI RCATGY 4 cut(s) 1718, 1951, 2150, 2236
XcmI CCANNNNNNNNNTGG 2 cut(s) 1067, 1552
XmiI GTMKAC 2 cut(s) 222, 298
XmnI GAANNNNTTC 2 cut(s) 331, 1691
XspI CTAG 3 cut(s) 585, 954, 1347
Zsp2I ATGCAT 2 cut(s) 1324, 2183
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.