Rw6G034260

Domain of unknown function (DUF3403)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
OG0000509
Physical Location & Seq
Reverse (-)
58862536 .. 58865648
3113 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G034260.1

Sequence Viewer

Length: 1560 bp
ATGGTGGATGGGAAGATTTCTTCTGTGAGTCATGCCCTGTGTGAAAATTCAACTGGAAGGTGCTTGACTTCCCTACCATCTATGTGTGAGGATGGTGATAGCTTTTCACAGGTTAAGGGATCACTGCCATCTACATTTAACATTGGTGCCATTAATACGGGGCCTAGTGGTTGTCAAACATTGTGTGAGAGCAATTGTTCTTGCACTGCATTTGCTTCACTTCAGAATGACCAAGAATGCCAACTTTATTATGGGAGTAAGCAGGATCTATTGAAGACCATAGTAAAAGGGCCAGGGATTATTTACATCCGCGGTACTGCTGCTACAAATGGTGGTAAGAAGTGGAAACTCGGGTTAGCTCTCACAGTTTCTTTGGCTACCCTCTTGGTTCTTATTCCTTTTTCCTTATGCTGCTATCTGCGTTGGAGAAAGGGACACAAAGAAGACCCAGAAACAGAAGGCATTATCAATTTGGACCAAGAAAGTTTATTCCAAAGGGCGACTAATGCGTCACCAGTTCAGCAGAATGCAGTTAGAGGTGCAAATAACATGGAGTTAGGCAGGCAGAAGGATCAAGATCTGCCCTTGTTTAGTATTTCTACGATACAGACTGCAACAAATTACTTTGCAGAGTCTAATAAACTCGGGGAAGGTGGATTTGGGCCTGTCTATAAGGGTAAGCTCCTAGTAGAAGGACAAGAAATTGCAGTGAAAAGACTGTCCAAAATTTCCCGCCAAGGGTCAGGGGAATTCAAAAATGAAGTCTCAGTGATTTGTAAGCTCCAACACAGGAACTTGGTTAGGCTTTTGGGATGCTGCATTGAAGCAGAAGAAAGTATACTAATTTACGAATACATGCCCAACAAAAGCCTGGACTTTTTCATTTTTGATTCAACCAAACGGTTACTTTTGGACTGGAGAAAGCGCGTGAACATTGTGGAAGGGATTGCTCAAGGCCTTCTATATCTTCACAAATACTCCCGATTAAGGATCATTCACCGTGATTTAAAGACCAGCAATATCCTGTTGGACAGTGACATGAACCCAAAGATTTCTGATTTTGGCATGGCAAGGATTTTCGGGGACAATGACACTAGAGGCAAAACAAACCGGGTTGTTGGTACATTTGGTTACATGTCACCGGAGTATGCCATGGACGGCCTCTTTTCTGAAAAATCCGATGTGTTTAGCTTTGGGGTGATCCTATTAGAGATTATTACTGGCAAGAAGAATATTGCCTTCTTTGAAGCTGATCATTCTCTGAATTTACTGGGCAAAGCTTGGACTTTGTGGAAAGAAGGTAATGGCATGGAGTTGATGGATTCGACACTGCGTGCTTCTTGTTTGAGCAGTGAAGTTATGAGATACCTACAGATGGGTCTTCTGTGCGTGCAAGAAAGAGCTATTGATCGACCAGACATGTCTGGTGTAGTTTCTCTGCTAAGCAATCAGTCATTTGCTCTACCTTTTCCTAAAGAACCTGCATTTTTGAGTCAGCAAATTTCGACCGATGCAGATTCATCTTCAAGTAGGCAAAGACATGCATTACTCTCAGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin DUF3403 PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

519

Amino Acids

57.47

Weight (kDa)

7.45

Isoelectric Point (pI)

46.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 210 - 411 4e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 212 - 478 5e-48 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000509)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g29542 FvH4_2g29543 FvH4_2g29543 FvH4_2g29543 FvH4_2g29543 FvH4_2g29544 FvH4_2g29545 FvH4_2g29545 FvH4_2g29545 FvH4_2g29545 FvH4_2g29545 FvH4_2g29560
malus_domestica MD15G1121300.v1.1
prunus_persica Prupe.1G473900_v2.0.a1 Prupe.1G474000_v2.0.a1 Prupe.1G474000_v2.0.a1 Prupe.1G474000_v2.0.a1 Prupe.1G474000_v2.0.a1 Prupe.1G474100_v2.0.a1 Prupe.1G474300_v2.0.a1 Prupe.1G474500_v2.0.a1
rosa_chinensis RchiOBHm_Chr6g0298411 RchiOBHm_Chr6g0298421 RchiOBHm_Chr6g0298431 RchiOBHm_Chr6g0298441 RchiOBHm_Chr6g0298451 RchiOBHm_Chr6g0298461 RchiOBHm_Chr6g0298471 RchiOBHm_Chr6g0298481 RchiOBHm_Chr6g0298491 RchiOBHm_Chr6g0298501 RchiOBHm_Chr6g0298521
rosa_laevigata RLG00000011506 RLG00000011508 RLG00000011509 RLG00000011511 RLG00000011513 RLG00000011514 RLG00000011515
rosa_multiflora Rmu_co8314937.1_g000001 Rmu_co8319199.1_g000001 Rmu_sc0004500.1_g000002 Rmu_sc0006543.1_g000001 Rmu_ssc0000289.1_g000039 Rmu_ssc0000289.1_g000040 Rmu_ssc0000289.1_g000047 Rmu_ssc0000289.1_g000048 Rmu_ssc0000289.1_g000049 Rmu_ssc0000289.1_g000051
rosa_roxburghii Rroxscaffold_7G00169570 Rroxscaffold_7G00169580 Rroxscaffold_7G00169600 Rroxscaffold_7G00169610 Rroxscaffold_7G00169620 Rroxscaffold_7G00169630 Rroxscaffold_7G00169650 Rroxscaffold_7G00169660 Rroxscaffold_7G00169670
rosa_rugosa Rorug06G0280700 Rorug06G0280800 Rorug06G0280900
rosa_samantha Rh6AG391700 Rh6AG391800 Rh6AG392000 Rh6AG392100 Rh6AG392200 Rh6BG399300 Rh6BG399400 Rh6BG399500 Rh6BG399700 Rh6BG400000 Rh6CG405400 Rh6CG405500 Rh6CG405600 Rh6CG405700 Rh6CG405800 Rh6DG391800 Rh6DG391900 Rh6DG392000 Rh6DG392100 Rh6DG392300
rosa_wichuraiana Rw6G034230 Rw6G034240 Rw6G034250 Rw6G034260 Rw6G034270 Rw6G034280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 508
Acc36I ACCTGC 1 cut(s) 1489
AccB1I GGYRCC 1 cut(s) 146
AccI GTMKAC 1 cut(s) 838
AccII CGCG 2 cut(s) 312, 927
AciI CCGC 3 cut(s) 310, 312, 733
AclWI GGATC 5 cut(s) 127, 273, 579, 998, 1195
AcsI RAATTY 5 cut(s) 46, 726, 749, 1264, 1500
AcuI CTGAAG 1 cut(s) 206
AdeI CACNNNGTG 1 cut(s) 1334
AfaI GTAC 2 cut(s) 316, 1123
AfiI CCNNNNNNNGG 3 cut(s) 738, 987, 1375
AflIII ACRYGT 2 cut(s) 1134, 1419
AgsI TTSAA 7 cut(s) 51, 274, 754, 824, 894, 1247, 1527
AjnI CCWGG 2 cut(s) 292, 870
AjuI GAANNNNNNNTTGG 2 cut(s) 642, 674
AluBI AGCT 8 cut(s) 102, 359, 682, 781, 1191, 1250, 1280, 1403
AluI AGCT 8 cut(s) 102, 359, 682, 781, 1191, 1250, 1280, 1403
Alw26I GTCTC 1 cut(s) 769
AlwI GGATC 5 cut(s) 127, 273, 579, 998, 1195
Ama87I CYCGRG 2 cut(s) 350, 644
AoxI GGCC 5 cut(s) 161, 290, 662, 955, 1159
ApeKI GCWGC 3 cut(s) 320, 411, 816
ApoI RAATTY 5 cut(s) 46, 726, 749, 1264, 1500
ArsI GACNNNNNNTTYG 2 cut(s) 747, 779
AseI ATTAAT 1 cut(s) 153
AspLEI GCGC 1 cut(s) 927
AspS9I GGNCC 4 cut(s) 161, 290, 475, 662
AsuC2I CCSGG 1 cut(s) 1112
AsuHPI GGTGA 5 cut(s) 107, 504, 989, 1131, 1210
AvaI CYCGRG 2 cut(s) 350, 644
AvaII GGWCC 1 cut(s) 475
BanI GGYRCC 1 cut(s) 146
BarI GAAGNNNNNNTAC 2 cut(s) 822, 854
BbsI GAAGAC 3 cut(s) 281, 450, 1373
BbvI GCAGC 3 cut(s) 307, 398, 803
BccI CCATC 6 cut(s) 2, 85, 86, 136, 1312, 1369
BceAI ACGGC 1 cut(s) 1174
BciT130I CCWGG 2 cut(s) 294, 872
BclI TGATCA 1 cut(s) 1252
BcnI CCSGG 1 cut(s) 1112
BcoDI GTCTC 1 cut(s) 769
BfaI CTAG 3 cut(s) 165, 686, 1095
BfmI CTRYAG 1 cut(s) 1370
BfuAI ACCTGC 1 cut(s) 1489
BglII AGATCT 1 cut(s) 577
BisI GCNGC 3 cut(s) 321, 412, 817
BlpI GCTNAGC 1 cut(s) 1442
BlsI GCNGC 3 cut(s) 322, 413, 818
Bme1390I CCNGG 3 cut(s) 294, 872, 1112
Bme18I GGWCC 1 cut(s) 475
BmeT110I CYCGRG 2 cut(s) 350, 644
BmgT120I GGNCC 4 cut(s) 161, 290, 475, 662
BmiI GGNNCC 2 cut(s) 148, 162
BmrFI CCNGG 3 cut(s) 294, 872, 1112
BmrI ACTGGG 1 cut(s) 1280
BmsI GCATC 2 cut(s) 803, 1501
BmuI ACTGGG 1 cut(s) 1280
BpiI GAAGAC 3 cut(s) 281, 450, 1373
BpmI CTGGAG 1 cut(s) 937
Bpu1102I GCTNAGC 1 cut(s) 1442
BpuEI CTTGAG 1 cut(s) 936
BpuMI CCSGG 1 cut(s) 1112
BsaBI GATNNNNATC 1 cut(s) 576
BsaJI CCNNGG 4 cut(s) 293, 310, 736, 1152
BsaWI WCCGGW 1 cut(s) 1141
BsaXI ACNNNNNCTCC 2 cut(s) 962, 992
Bsc4I CCNNNNNNNGG 3 cut(s) 738, 987, 1375
Bse1I ACTGG 5 cut(s) 58, 515, 920, 1225, 1275
Bse8I GATNNNNATC 1 cut(s) 576
BseBI CCWGG 2 cut(s) 294, 872
BseDI CCNNGG 4 cut(s) 293, 310, 736, 1152
BseGI GGATG 4 cut(s) 13, 97, 306, 818
BseJI GATNNNNATC 1 cut(s) 576
BseLI CCNNNNNNNGG 3 cut(s) 738, 987, 1375
BseMII CTCAG 1 cut(s) 780
BseNI ACTGG 5 cut(s) 58, 515, 920, 1225, 1275
BseXI GCAGC 3 cut(s) 307, 398, 803
Bsh1236I CGCG 2 cut(s) 312, 927
Bsh1285I CGRYCG 1 cut(s) 1509
BshFI GGCC 5 cut(s) 163, 292, 664, 957, 1161
BshNI GGYRCC 1 cut(s) 146
BsiEI CGRYCG 1 cut(s) 1509
BsiHKCI CYCGRG 2 cut(s) 350, 644
BsiSI CCGG 2 cut(s) 1111, 1142
BslFI GGGAC 2 cut(s) 447, 1097
BslI CCNNNNNNNGG 3 cut(s) 738, 987, 1375
BsmAI GTCTC 1 cut(s) 769
BsmFI GGGAC 2 cut(s) 447, 1097
BsmI GAATGC 2 cut(s) 242, 532
BsnI GGCC 5 cut(s) 163, 292, 664, 957, 1161
BsoBI CYCGRG 2 cut(s) 350, 644
Bsp143I GATC 8 cut(s) 119, 265, 571, 577, 990, 1200, 1252, 1408
Bsp1720I GCTNAGC 1 cut(s) 1442
Bsp19I CCATGG 1 cut(s) 1152
BspACI CCGC 3 cut(s) 310, 312, 733
BspANI GGCC 5 cut(s) 163, 292, 664, 957, 1161
BspCNI CTCAG 1 cut(s) 779
BspFNI CGCG 2 cut(s) 312, 927
BspLI GGNNCC 2 cut(s) 148, 162
BspMI ACCTGC 1 cut(s) 1489
BspPI GGATC 5 cut(s) 127, 273, 579, 998, 1195
BspT107I GGYRCC 1 cut(s) 146
BsrI ACTGG 5 cut(s) 58, 515, 920, 1225, 1275
BssECI CCNNGG 4 cut(s) 293, 310, 736, 1152
BssMI GATC 8 cut(s) 119, 265, 571, 577, 990, 1200, 1252, 1408
BssNAI GTATAC 1 cut(s) 839
BssT1I CCWWGG 2 cut(s) 736, 1152
Bst1107I GTATAC 1 cut(s) 839
Bst2UI CCWGG 2 cut(s) 294, 872
Bst4CI ACNGT 5 cut(s) 367, 720, 903, 1001, 1034
BstC8I GCNNGC 3 cut(s) 563, 1335, 1391
BstDEI CTNAG 3 cut(s) 766, 1442, 1552
BstDSI CCRYGG 2 cut(s) 310, 1152
BstF5I GGATG 4 cut(s) 13, 97, 306, 818
BstFNI CGCG 2 cut(s) 312, 927
BstHHI GCGC 1 cut(s) 927
BstKTI GATC 8 cut(s) 122, 268, 574, 580, 993, 1203, 1255, 1411
BstMAI GTCTC 1 cut(s) 769
BstMBI GATC 8 cut(s) 119, 265, 571, 577, 990, 1200, 1252, 1408
BstMCI CGRYCG 1 cut(s) 1509
BstMWI GCNNNNNNNGC 1 cut(s) 506
BstNI CCWGG 2 cut(s) 294, 872
BstNSI RCATGY 4 cut(s) 859, 1138, 1423, 1544
BstSCI CCNGG 3 cut(s) 292, 870, 1110
BstSFI CTRYAG 1 cut(s) 1370
BstUI CGCG 2 cut(s) 312, 927
BstV1I GCAGC 3 cut(s) 307, 398, 803
BstV2I GAAGAC 3 cut(s) 281, 450, 1373
BstX2I RGATCY 2 cut(s) 265, 577
BstYI RGATCY 2 cut(s) 265, 577
BstZ17I GTATAC 1 cut(s) 839
BsuRI GGCC 5 cut(s) 163, 292, 664, 957, 1161
BtgI CCRYGG 2 cut(s) 310, 1152
BtsCI GGATG 4 cut(s) 13, 97, 306, 818
BtsI GCAGTG 5 cut(s) 122, 204, 714, 1328, 1357
BtsIMutI CAGTG 7 cut(s) 122, 204, 714, 774, 1039, 1328, 1357
BveI ACCTGC 1 cut(s) 1489
Cac8I GCNNGC 3 cut(s) 563, 1335, 1391
CfoI GCGC 1 cut(s) 927
Cfr13I GGNCC 4 cut(s) 161, 290, 475, 662
Cfr42I CCGCGG 1 cut(s) 313
CseI GACGC 1 cut(s) 498
Csp6I GTAC 2 cut(s) 315, 1122
CviQI GTAC 2 cut(s) 315, 1122
DdeI CTNAG 3 cut(s) 766, 1442, 1552
DpnI GATC 8 cut(s) 121, 267, 573, 579, 992, 1202, 1254, 1410
DpnII GATC 8 cut(s) 119, 265, 571, 577, 990, 1200, 1252, 1408
DraI TTTAAA 1 cut(s) 1008
DraIII CACNNNGTG 1 cut(s) 1334
DrdI GACNNNNNNGTC 1 cut(s) 508
DseDI GACNNNNNNGTC 1 cut(s) 508
Eco130I CCWWGG 2 cut(s) 736, 1152
Eco147I AGGCCT 1 cut(s) 957
Eco47I GGWCC 1 cut(s) 475
Eco57I CTGAAG 1 cut(s) 206
Eco88I CYCGRG 2 cut(s) 350, 644
EcoO109I RGGNCCY 1 cut(s) 161
EcoRI GAATTC 1 cut(s) 749
EcoRII CCWGG 2 cut(s) 292, 870
EcoT14I CCWWGG 2 cut(s) 736, 1152
EcoT22I ATGCAT 1 cut(s) 1546
ErhI CCWWGG 2 cut(s) 736, 1152
FaqI GGGAC 2 cut(s) 447, 1097
FauI CCCGC 1 cut(s) 740
FbaI TGATCA 1 cut(s) 1252
FblI GTMKAC 1 cut(s) 838
Fnu4HI GCNGC 3 cut(s) 321, 412, 817
FokI GGATG 4 cut(s) 20, 104, 293, 825
Fsp4HI GCNGC 3 cut(s) 321, 412, 817
FspBI CTAG 3 cut(s) 165, 686, 1095
GlaI GCGC 1 cut(s) 926
GluI GCNGC 3 cut(s) 321, 412, 817
GsuI CTGGAG 1 cut(s) 937
HaeIII GGCC 5 cut(s) 163, 292, 664, 957, 1161
HapII CCGG 2 cut(s) 1111, 1142
HgaI GACGC 1 cut(s) 498
HhaI GCGC 1 cut(s) 927
Hin6I GCGC 1 cut(s) 925
HinP1I GCGC 1 cut(s) 925
HindIII AAGCTT 1 cut(s) 1278
HinfI GANTC 6 cut(s) 28, 632, 890, 1322, 1492, 1517
HpaII CCGG 2 cut(s) 1111, 1142
HphI GGTGA 5 cut(s) 107, 504, 989, 1131, 1210
Hpy166II GTNNAC 2 cut(s) 839, 931
Hpy188I TCNGA 6 cut(s) 225, 1057, 1171, 1180, 1263, 1555
Hpy188III TCNNGA 2 cut(s) 575, 981
Hpy8I GTNNAC 2 cut(s) 839, 931
HpyAV CCTTC 9 cut(s) 51, 452, 562, 644, 686, 935, 968, 1249, 1292
HpyCH4III ACNGT 5 cut(s) 367, 720, 903, 1001, 1034
HpyF10VI GCNNNNNNNGC 1 cut(s) 506
HpyF3I CTNAG 3 cut(s) 766, 1442, 1552
HspAI GCGC 1 cut(s) 925
Ksp22I TGATCA 1 cut(s) 1252
KspI CCGCGG 1 cut(s) 313
Kzo9I GATC 8 cut(s) 119, 265, 571, 577, 990, 1200, 1252, 1408
LmnI GCTCC 2 cut(s) 687, 786
Lsp1109I GCAGC 3 cut(s) 307, 398, 803
LweI GCATC 2 cut(s) 803, 1501
MaeI CTAG 3 cut(s) 165, 686, 1095
MaeIII GTNAC 5 cut(s) 510, 903, 1034, 1130, 1137
MalI GATC 8 cut(s) 121, 267, 573, 579, 992, 1202, 1254, 1410
MboI GATC 8 cut(s) 119, 265, 571, 577, 990, 1200, 1252, 1408
MboII GAAGA 9 cut(s) 12, 25, 286, 455, 842, 959, 1240, 1373, 1515
MfeI CAATTG 1 cut(s) 193
MflI RGATCY 2 cut(s) 265, 577
MlyI GAGTC 3 cut(s) 37, 641, 1501
MmeI TCCRAC 3 cut(s) 404, 808, 1008
MnlI CCTC 5 cut(s) 82, 392, 530, 1091, 1172
Mph1103I ATGCAT 1 cut(s) 1546
MseI TTAA 5 cut(s) 114, 138, 153, 986, 1007
MslI CAYNNNNRTG 1 cut(s) 82
MspA1I CMGCKG 1 cut(s) 312
MspI CCGG 2 cut(s) 1111, 1142
MspR9I CCNGG 3 cut(s) 294, 872, 1112
MunI CAATTG 1 cut(s) 193
Mva1269I GAATGC 2 cut(s) 242, 532
MvaI CCWGG 2 cut(s) 294, 872
MvnI CGCG 2 cut(s) 312, 927
MwoI GCNNNNNNNGC 1 cut(s) 506
NciI CCSGG 1 cut(s) 1112
NcoI CCATGG 1 cut(s) 1152
NdeII GATC 8 cut(s) 119, 265, 571, 577, 990, 1200, 1252, 1408
NlaIV GGNNCC 2 cut(s) 148, 162
NmuCI GTSAC 3 cut(s) 510, 1034, 1137
NsiI ATGCAT 1 cut(s) 1546
NspI RCATGY 4 cut(s) 859, 1138, 1423, 1544
PceI AGGCCT 1 cut(s) 957
PciI ACATGT 2 cut(s) 1134, 1419
PctI GAATGC 2 cut(s) 242, 532
PfeI GAWTC 3 cut(s) 890, 1322, 1517
PkrI GCNGC 3 cut(s) 322, 413, 818
PleI GAGTC 3 cut(s) 36, 640, 1500
PpsI GAGTC 3 cut(s) 36, 640, 1500
PscI ACATGT 2 cut(s) 1134, 1419
PshBI ATTAAT 1 cut(s) 153
Psp6I CCWGG 2 cut(s) 292, 870
PspGI CCWGG 2 cut(s) 292, 870
PspN4I GGNNCC 2 cut(s) 148, 162
PspPI GGNCC 4 cut(s) 161, 290, 475, 662
PsuI RGATCY 2 cut(s) 265, 577
RsaI GTAC 2 cut(s) 316, 1123
RsaNI GTAC 2 cut(s) 315, 1122
RseI CAYNNNNRTG 1 cut(s) 82
SacII CCGCGG 1 cut(s) 313
SaqAI TTAA 5 cut(s) 114, 138, 153, 986, 1007
SatI GCNGC 3 cut(s) 321, 412, 817
Sau3AI GATC 8 cut(s) 119, 265, 571, 577, 990, 1200, 1252, 1408
Sau96I GGNCC 4 cut(s) 161, 290, 475, 662
SchI GAGTC 3 cut(s) 37, 641, 1501
ScrFI CCNGG 3 cut(s) 294, 872, 1112
SfaNI GCATC 2 cut(s) 803, 1501
SfcI CTRYAG 1 cut(s) 1370
Sfr303I CCGCGG 1 cut(s) 313
SgrBI CCGCGG 1 cut(s) 313
SinI GGWCC 1 cut(s) 475
SmiMI CAYNNNNRTG 1 cut(s) 82
SmlI CTYRAG 1 cut(s) 951
SmoI CTYRAG 1 cut(s) 951
SseBI AGGCCT 1 cut(s) 957
SsiI CCGC 3 cut(s) 310, 312, 733
SspI AATATT 1 cut(s) 1234
SspMI CTAG 3 cut(s) 165, 686, 1095
StuI AGGCCT 1 cut(s) 957
StyD4I CCNGG 3 cut(s) 292, 870, 1110
StyI CCWWGG 2 cut(s) 736, 1152
TaaI ACNGT 5 cut(s) 367, 720, 903, 1001, 1034
TaqI TCGA 3 cut(s) 1325, 1411, 1505
TaqII GACCGA 1 cut(s) 1523
TfiI GAWTC 3 cut(s) 890, 1322, 1517
Tru1I TTAA 5 cut(s) 114, 138, 153, 986, 1007
Tru9I TTAA 5 cut(s) 114, 138, 153, 986, 1007
TscAI CASTG 7 cut(s) 129, 211, 714, 774, 1039, 1335, 1357
TseFI GTSAC 3 cut(s) 510, 1034, 1137
TseI GCWGC 3 cut(s) 320, 411, 816
Tsp45I GTSAC 3 cut(s) 510, 1034, 1137
TspDTI ATGAA 4 cut(s) 774, 871, 1055, 1509
TspRI CASTG 7 cut(s) 129, 211, 714, 774, 1039, 1335, 1357
VpaK11BI GGWCC 1 cut(s) 475
VspI ATTAAT 1 cut(s) 153
XapI RAATTY 5 cut(s) 46, 726, 749, 1264, 1500
XceI RCATGY 4 cut(s) 859, 1138, 1423, 1544
XcmI CCANNNNNNNNNTGG 2 cut(s) 248, 868
XmiI GTMKAC 1 cut(s) 838
XspI CTAG 3 cut(s) 165, 686, 1095
Zsp2I ATGCAT 1 cut(s) 1546
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.