Rroxscaffold_7G00169650

serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0000509
Physical Location & Seq
Forward (+)
10236994 .. 10242385
5392 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00169650.1

Sequence Viewer

Length: 2085 bp
ATGTCGGATGTTGTTTCTCTTCTAAGCAATCAATCATTTGCTCTGCCTCTTCCTAAAGAACCTGCATTTTTGAGGCAGTTAAGTTCGATTGATGCAGATTCATCTTCAAGTATGCAAAGATACTACTCTCAAAATGACATAACTATTTCAGAAGAACATGGCAGCTTCTTTTCATTTTCATCTCTTGCAACAGACACACTTACACCTTCAGATGCATTAAGAGACAGTCAAACGCTGGTTTCAGTTGGTGGAGTTTTCGTGCTTGGCTTTTTCAATGAAAGCTCTTCAGGTTATTACTATCTGGGAATTTGGTTTAAAGCTGATGCAAACAAGGTTGTCTGGGTTGACCGCGAAAACCCCATAATGGATTCATCTGGCCTGCTTCAAATCCGGTCTGGGAATTTGGTTCTCACAGACCGTCGACAAGTGCCGCTGATAGTCAACTCAGGAAATCTTGCCACCACTACAACTAACACAACTGCAACACTTCTTGATACTGGAAACTTGGTCCTCAAGGAAGCAGCTACAGGTACTATCATATGGCAGAGCTTTGATATTCCAACTGACACTTATCTTCCTGGGATGAAGATTGGGTTATTTGGCCTAAACACAACCCAGCAGACCTTTCGCATTCTTGTTTCTTGGGCAAGCCCTCAAAATCCAACTCGTGGCCTATTTACCTTAAGCATTGATGCCAACGACCACACAAGGATTTCGGTTTGGCGAGGAGATGGAGCTAAGATGAATATCGGTTTCTGGGAAGGAAATGGCTTAAGGTTTATTTTTGAGAACTCAACTGAGAATATGTACAATTTTAGCTTCCAGTCCAATCAATCTGAAGCCTTCTACACTTTTAGCACACCGAAGAACTACGACCTCATGTGGTTTGTGATGGCTTCCACAGGAACGCTGGACCAGTATTTTATGTTGGATGAGAAGATTTCTAATGTGAGTCATGCTTTGTGTGAAGATTCAAATGGTGGAAATACTGGGAGGTGCTTGACTTCGCTACCATCTATGTGTGATGATGGTAAATTTTCTGAGATGAATGGTTTACTACCATCTAACACTAGTACTGGTTCCATCATTAATGTATGGACTGCTGATTGTGAAACGCTGTGCAAAAACAATTGTTCTTGTACTGCATATACTTCACTTCACAGTGGACAACCAGGATGCCAACTTTATTATGGGAGCAGACAAAATCTATCGAAGATCATAGAGAAGGGCGCGGGGTTATTTACATCCGCAGTGGTGCTTCAACTGATCTTATTTGACAACAATAAGATTCAAATTGGCAATCTGACAATATACCATGCTTTCCTATGGATTGTTGGGGAAATCTTTACACTATTTCATCAGAAAGCAACCTTTTCCATTTATTGTTACCACTTACCAGAAGATCAAGTAACCAGACGAGAATCTGATCAAGCAAGGTTATTCCAAATGTGCTCCAATGATGCATCACCAATACAACATGATGAAGTTAGAAGTGCAAATAACATGGAATTAGGCAGACGGAAGGACCAAGATCTACCCTTCTTTAGTTTTTCTGCAATAAAGACTGCAACAGATTACTTCGCAGAGGCTAATAAACTTGGGGAAGGTGGATATGGGCCTGTATATAAGGGTAAGTTGCTTCAAGAAGGACAGGAAATTGCAGTGAAAAGGCTTTCCAAAATTTCCAGGCAAGGGTTGGAGGAGTTCAAAAATGAAGTCTCAGTAATTTGTAAGCTCCAACACAGGAATTTGGTTAGGCTTTTGGGATGCTGCATTGAAGCAGAAGAAAGCATACTGGTTTATGAGTTCATGCCCAACAATAGTCTGGATTCCTTCATCTTTGATTCAACCAAACATGTACTTTTGGACTGGGAGAGTCGCATGAGCATTATTGAAGGGATTGCTCAAGGTCTTCTGTATCTTCACAAATACTCCAGATTAAGGATCATTCACCGTGATTTAAAGACAAGCAATATTCTACTTGACTGTGACATGAACCCAAAAATTTCTGATTTTGGCATGGCAAGAATTGTTGGCGATGATGACATAAGGGGGCAAACAAAACGGGTTGTTGGTACAATGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin DUF3403 PAN_2 Pkinase_Tyr

Protein Analysis

694

Amino Acids

77.65

Weight (kDa)

5.31

Isoelectric Point (pI)

40.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 112 - 215 4.9e-25 D-mannose binding lectin
Pkinase PF00069 528 - 693 1.6e-32 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 531 - 683 2.3e-34 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000509)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g29542 FvH4_2g29543 FvH4_2g29543 FvH4_2g29543 FvH4_2g29543 FvH4_2g29544 FvH4_2g29545 FvH4_2g29545 FvH4_2g29545 FvH4_2g29545 FvH4_2g29545 FvH4_2g29560
malus_domestica MD15G1121300.v1.1
prunus_persica Prupe.1G473900_v2.0.a1 Prupe.1G474000_v2.0.a1 Prupe.1G474000_v2.0.a1 Prupe.1G474000_v2.0.a1 Prupe.1G474000_v2.0.a1 Prupe.1G474100_v2.0.a1 Prupe.1G474300_v2.0.a1 Prupe.1G474500_v2.0.a1
rosa_chinensis RchiOBHm_Chr6g0298411 RchiOBHm_Chr6g0298421 RchiOBHm_Chr6g0298431 RchiOBHm_Chr6g0298441 RchiOBHm_Chr6g0298451 RchiOBHm_Chr6g0298461 RchiOBHm_Chr6g0298471 RchiOBHm_Chr6g0298481 RchiOBHm_Chr6g0298491 RchiOBHm_Chr6g0298501 RchiOBHm_Chr6g0298521
rosa_laevigata RLG00000011506 RLG00000011508 RLG00000011509 RLG00000011511 RLG00000011513 RLG00000011514 RLG00000011515
rosa_multiflora Rmu_co8314937.1_g000001 Rmu_co8319199.1_g000001 Rmu_sc0004500.1_g000002 Rmu_sc0006543.1_g000001 Rmu_ssc0000289.1_g000039 Rmu_ssc0000289.1_g000040 Rmu_ssc0000289.1_g000047 Rmu_ssc0000289.1_g000048 Rmu_ssc0000289.1_g000049 Rmu_ssc0000289.1_g000051
rosa_roxburghii Rroxscaffold_7G00169570 Rroxscaffold_7G00169580 Rroxscaffold_7G00169600 Rroxscaffold_7G00169610 Rroxscaffold_7G00169620 Rroxscaffold_7G00169630 Rroxscaffold_7G00169650 Rroxscaffold_7G00169660 Rroxscaffold_7G00169670
rosa_rugosa Rorug06G0280700 Rorug06G0280800 Rorug06G0280900
rosa_samantha Rh6AG391700 Rh6AG391800 Rh6AG392000 Rh6AG392100 Rh6AG392200 Rh6BG399300 Rh6BG399400 Rh6BG399500 Rh6BG399700 Rh6BG400000 Rh6CG405400 Rh6CG405500 Rh6CG405600 Rh6CG405700 Rh6CG405800 Rh6DG391800 Rh6DG391900 Rh6DG392000 Rh6DG392100 Rh6DG392300
rosa_wichuraiana Rw6G034230 Rw6G034240 Rw6G034250 Rw6G034260 Rw6G034270 Rw6G034280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 70
AccB7I CCANNNNNTGG 1 cut(s) 668
AccI GTMKAC 1 cut(s) 421
AccII CGCG 2 cut(s) 351, 1232
AciI CCGC 4 cut(s) 349, 431, 1232, 1248
AclWI GGATC 1 cut(s) 1952
AcsI RAATTY 6 cut(s) 306, 400, 1034, 1680, 1747, 2004
AcuI CTGAAG 3 cut(s) 192, 270, 858
AfaI GTAC 6 cut(s) 532, 809, 1075, 1141, 1860, 2077
AfiI CCNNNNNNNGG 4 cut(s) 364, 668, 1692, 1941
AflII CTTAAG 2 cut(s) 682, 772
AflIII ACRYGT 1 cut(s) 1855
AhlI ACTAGT 1 cut(s) 1070
AjnI CCWGG 3 cut(s) 577, 1171, 1685
AluBI AGCT 8 cut(s) 165, 282, 320, 524, 549, 737, 819, 1735
AluI AGCT 8 cut(s) 165, 282, 320, 524, 549, 737, 819, 1735
Alw21I GWGCWC 1 cut(s) 1454
Alw26I GTCTC 2 cut(s) 216, 1723
AlwI GGATC 1 cut(s) 1952
AoxI GGCC 4 cut(s) 376, 601, 670, 1616
ApeKI GCWGC 3 cut(s) 162, 521, 1770
ApoI RAATTY 6 cut(s) 306, 400, 1034, 1680, 1747, 2004
ArsI GACNNNNNNTTYG 2 cut(s) 1701, 1733
AseI ATTAAT 1 cut(s) 1089
AspLEI GCGC 1 cut(s) 1232
AspS9I GGNCC 4 cut(s) 508, 913, 1525, 1616
AsuHPI GGTGA 2 cut(s) 1458, 1943
AvaII GGWCC 3 cut(s) 508, 913, 1525
BarI GAAGNNNNNNTAC 2 cut(s) 1776, 1808
BauI CACGAG 1 cut(s) 666
BbsI GAAGAC 1 cut(s) 1904
Bbv12I GWGCWC 1 cut(s) 1454
BbvI GCAGC 3 cut(s) 174, 533, 1757
BccI CCATC 6 cut(s) 725, 886, 1021, 1022, 1069, 1091
BcgI CGANNNNNNTGC 2 cut(s) 608, 642
BciT130I CCWGG 3 cut(s) 579, 1173, 1687
BclI TGATCA 1 cut(s) 1426
BcoDI GTCTC 2 cut(s) 216, 1723
BcuI ACTAGT 1 cut(s) 1070
BfaI CTAG 1 cut(s) 1071
BfmI CTRYAG 1 cut(s) 525
BfrI CTTAAG 2 cut(s) 682, 772
BfuAI ACCTGC 1 cut(s) 70
BglII AGATCT 1 cut(s) 1531
BisI GCNGC 4 cut(s) 163, 431, 522, 1771
BlsI GCNGC 4 cut(s) 164, 432, 523, 1772
BmcAI AGTACT 1 cut(s) 1075
Bme1390I CCNGG 3 cut(s) 579, 1173, 1687
Bme18I GGWCC 3 cut(s) 508, 913, 1525
BmgT120I GGNCC 4 cut(s) 508, 913, 1525, 1616
BmiI GGNNCC 1 cut(s) 1081
BmrFI CCNGG 3 cut(s) 579, 1173, 1687
BmrI ACTGGG 2 cut(s) 999, 1879
BmsI GCATC 8 cut(s) 82, 202, 313, 682, 1166, 1450, 1472, 1757
BmuI ACTGGG 2 cut(s) 999, 1879
BpiI GAAGAC 1 cut(s) 1904
BpmI CTGGAG 1 cut(s) 1918
BpuEI CTTGAG 2 cut(s) 497, 1890
BsaBI GATNNNNATC 1 cut(s) 746
BsaJI CCNNGG 1 cut(s) 578
BsaWI WCCGGW 1 cut(s) 390
BsaXI ACNNNNNCTCC 4 cut(s) 243, 273, 1916, 1946
Bsc4I CCNNNNNNNGG 4 cut(s) 364, 668, 1692, 1941
Bse1I ACTGG 7 cut(s) 502, 823, 916, 994, 1081, 1800, 1874
Bse8I GATNNNNATC 1 cut(s) 746
BseBI CCWGG 3 cut(s) 579, 1173, 1687
BseDI CCNNGG 1 cut(s) 578
BseGI GGATG 6 cut(s) 13, 588, 937, 1181, 1244, 1772
BseJI GATNNNNATC 1 cut(s) 746
BseLI CCNNNNNNNGG 4 cut(s) 364, 668, 1692, 1941
BseMII CTCAG 4 cut(s) 459, 789, 1032, 1734
BseNI ACTGG 7 cut(s) 502, 823, 916, 994, 1081, 1800, 1874
BseRI GAGGAG 2 cut(s) 741, 1715
BseXI GCAGC 3 cut(s) 174, 533, 1757
BseYI CCCAGC 1 cut(s) 615
Bsh1236I CGCG 2 cut(s) 351, 1232
BshFI GGCC 4 cut(s) 378, 603, 672, 1618
BsiHKAI GWGCWC 1 cut(s) 1454
BsiSI CCGG 1 cut(s) 391
BslI CCNNNNNNNGG 4 cut(s) 364, 668, 1692, 1941
BsmAI GTCTC 2 cut(s) 216, 1723
BsmI GAATGC 1 cut(s) 630
BsnI GGCC 4 cut(s) 378, 603, 672, 1618
Bsp1286I GDGCHC 1 cut(s) 1454
Bsp1407I TGTACA 1 cut(s) 807
Bsp143I GATC 6 cut(s) 1215, 1266, 1402, 1426, 1531, 1944
BspACI CCGC 4 cut(s) 349, 431, 1232, 1248
BspANI GGCC 4 cut(s) 378, 603, 672, 1618
BspCNI CTCAG 4 cut(s) 458, 790, 1033, 1733
BspFNI CGCG 2 cut(s) 351, 1232
BspLI GGNNCC 1 cut(s) 1081
BspMI ACCTGC 1 cut(s) 70
BspPI GGATC 1 cut(s) 1952
BspQI GCTCTTC 1 cut(s) 289
BspTI CTTAAG 2 cut(s) 682, 772
BsrGI TGTACA 1 cut(s) 807
BsrI ACTGG 7 cut(s) 502, 823, 916, 994, 1081, 1800, 1874
BssECI CCNNGG 1 cut(s) 578
BssMI GATC 6 cut(s) 1215, 1266, 1402, 1426, 1531, 1944
BssSI CACGAG 1 cut(s) 666
Bst2BI CACGAG 1 cut(s) 666
Bst2UI CCWGG 3 cut(s) 579, 1173, 1687
Bst4CI ACNGT 5 cut(s) 227, 419, 1163, 1955, 1988
Bst6I CTCTTC 3 cut(s) 24, 54, 289
BstAFI CTTAAG 2 cut(s) 682, 772
BstAUI TGTACA 1 cut(s) 807
BstC8I GCNNGC 2 cut(s) 380, 649
BstDEI CTNAG 6 cut(s) 23, 445, 738, 798, 1041, 1720
BstF5I GGATG 6 cut(s) 13, 588, 937, 1181, 1244, 1772
BstFNI CGCG 2 cut(s) 351, 1232
BstHHI GCGC 1 cut(s) 1232
BstKTI GATC 6 cut(s) 1218, 1269, 1405, 1429, 1534, 1947
BstMAI GTCTC 2 cut(s) 216, 1723
BstMBI GATC 6 cut(s) 1215, 1266, 1402, 1426, 1531, 1944
BstNI CCWGG 3 cut(s) 579, 1173, 1687
BstNSI RCATGY 1 cut(s) 1859
BstSCI CCNGG 3 cut(s) 577, 1171, 1685
BstSFI CTRYAG 1 cut(s) 525
BstUI CGCG 2 cut(s) 351, 1232
BstV1I GCAGC 3 cut(s) 174, 533, 1757
BstV2I GAAGAC 1 cut(s) 1904
BstX2I RGATCY 1 cut(s) 1531
BstYI RGATCY 1 cut(s) 1531
BsuRI GGCC 4 cut(s) 378, 603, 672, 1618
BtgZI GCGATG 1 cut(s) 2052
BtsCI GGATG 6 cut(s) 13, 588, 937, 1181, 1244, 1772
BtsI GCAGTG 2 cut(s) 1257, 1668
BtsIMutI CAGTG 3 cut(s) 1168, 1257, 1668
BveI ACCTGC 1 cut(s) 70
Cac8I GCNNGC 2 cut(s) 380, 649
CfoI GCGC 1 cut(s) 1232
Cfr13I GGNCC 4 cut(s) 508, 913, 1525, 1616
Csp6I GTAC 6 cut(s) 531, 808, 1074, 1140, 1859, 2076
CviQI GTAC 6 cut(s) 531, 808, 1074, 1140, 1859, 2076
DdeI CTNAG 6 cut(s) 23, 445, 738, 798, 1041, 1720
DpnI GATC 6 cut(s) 1217, 1268, 1404, 1428, 1533, 1946
DpnII GATC 6 cut(s) 1215, 1266, 1402, 1426, 1531, 1944
DraI TTTAAA 2 cut(s) 316, 1962
Eam1104I CTCTTC 3 cut(s) 24, 54, 289
EarI CTCTTC 3 cut(s) 24, 54, 289
Eco47I GGWCC 3 cut(s) 508, 913, 1525
Eco57I CTGAAG 3 cut(s) 192, 270, 858
EcoRII CCWGG 3 cut(s) 577, 1171, 1685
EcoT22I ATGCAT 2 cut(s) 217, 1465
FauI CCCGC 1 cut(s) 1225
FauNDI CATATG 1 cut(s) 539
FbaI TGATCA 1 cut(s) 1426
FblI GTMKAC 1 cut(s) 421
Fnu4HI GCNGC 4 cut(s) 163, 431, 522, 1771
FokI GGATG 6 cut(s) 20, 595, 944, 1188, 1231, 1779
Fsp4HI GCNGC 4 cut(s) 163, 431, 522, 1771
FspBI CTAG 1 cut(s) 1071
GlaI GCGC 1 cut(s) 1231
GluI GCNGC 4 cut(s) 163, 431, 522, 1771
GsaI CCCAGC 1 cut(s) 619
GsuI CTGGAG 1 cut(s) 1918
HaeIII GGCC 4 cut(s) 378, 603, 672, 1618
HapII CCGG 1 cut(s) 391
HhaI GCGC 1 cut(s) 1232
Hin6I GCGC 1 cut(s) 1230
HinP1I GCGC 1 cut(s) 1230
HincII GTYRAC 3 cut(s) 346, 422, 442
HindII GTYRAC 3 cut(s) 346, 422, 442
HinfI GANTC 9 cut(s) 98, 368, 952, 971, 1288, 1421, 1829, 1844, 1876
HpaII CCGG 1 cut(s) 391
HphI GGTGA 2 cut(s) 1458, 1943
Hpy166II GTNNAC 5 cut(s) 346, 422, 442, 1055, 1166
Hpy188I TCNGA 9 cut(s) 7, 151, 211, 838, 1042, 1305, 1362, 1426, 2011
Hpy188III TCNNGA 5 cut(s) 447, 491, 1643, 1826, 1935
Hpy8I GTNNAC 5 cut(s) 346, 422, 442, 1055, 1166
Hpy99I CGWCG 1 cut(s) 423
HpyCH4III ACNGT 5 cut(s) 227, 419, 1163, 1955, 1988
HpyF3I CTNAG 6 cut(s) 23, 445, 738, 798, 1041, 1720
HspAI GCGC 1 cut(s) 1230
Ksp22I TGATCA 1 cut(s) 1426
Kzo9I GATC 6 cut(s) 1215, 1266, 1402, 1426, 1531, 1944
LguI GCTCTTC 1 cut(s) 289
LmnI GCTCC 4 cut(s) 734, 1194, 1457, 1740
Lsp1109I GCAGC 3 cut(s) 174, 533, 1757
LweI GCATC 8 cut(s) 82, 202, 313, 682, 1166, 1450, 1472, 1757
MaeI CTAG 1 cut(s) 1071
MaeIII GTNAC 3 cut(s) 1385, 1408, 1988
MalI GATC 6 cut(s) 1217, 1268, 1404, 1428, 1533, 1946
MboI GATC 6 cut(s) 1215, 1266, 1402, 1426, 1531, 1944
MfeI CAATTG 1 cut(s) 1129
MflI RGATCY 1 cut(s) 1531
MhlI GDGCHC 1 cut(s) 1454
MlyI GAGTC 2 cut(s) 961, 1885
MmeI TCCRAC 5 cut(s) 584, 686, 909, 1677, 1762
MnlI CCTC 9 cut(s) 57, 66, 521, 663, 719, 887, 987, 1579, 1693
Mph1103I ATGCAT 2 cut(s) 217, 1465
MseI TTAA 8 cut(s) 80, 218, 315, 683, 773, 1089, 1940, 1961
MslI CAYNNNNRTG 1 cut(s) 1018
MspA1I CMGCKG 1 cut(s) 433
MspCI CTTAAG 2 cut(s) 682, 772
MspI CCGG 1 cut(s) 391
MspR9I CCNGG 3 cut(s) 579, 1173, 1687
MunI CAATTG 1 cut(s) 1129
Mva1269I GAATGC 1 cut(s) 630
MvaI CCWGG 3 cut(s) 579, 1173, 1687
MvnI CGCG 2 cut(s) 351, 1232
NdeI CATATG 1 cut(s) 539
NdeII GATC 6 cut(s) 1215, 1266, 1402, 1426, 1531, 1944
NlaIV GGNNCC 1 cut(s) 1081
NmuCI GTSAC 1 cut(s) 1988
NsiI ATGCAT 2 cut(s) 217, 1465
NspI RCATGY 1 cut(s) 1859
PciI ACATGT 1 cut(s) 1855
PciSI GCTCTTC 1 cut(s) 289
PctI GAATGC 1 cut(s) 630
PfeI GAWTC 7 cut(s) 98, 368, 971, 1288, 1421, 1829, 1844
PflMI CCANNNNNTGG 1 cut(s) 668
PkrI GCNGC 4 cut(s) 164, 432, 523, 1772
PleI GAGTC 2 cut(s) 960, 1884
PpsI GAGTC 2 cut(s) 960, 1884
PscI ACATGT 1 cut(s) 1855
PshBI ATTAAT 1 cut(s) 1089
Psp6I CCWGG 3 cut(s) 577, 1171, 1685
PspFI CCCAGC 1 cut(s) 615
PspGI CCWGG 3 cut(s) 577, 1171, 1685
PspN4I GGNNCC 1 cut(s) 1081
PspPI GGNCC 4 cut(s) 508, 913, 1525, 1616
PsuI RGATCY 1 cut(s) 1531
RsaI GTAC 6 cut(s) 532, 809, 1075, 1141, 1860, 2077
RsaNI GTAC 6 cut(s) 531, 808, 1074, 1140, 1859, 2076
RseI CAYNNNNRTG 1 cut(s) 1018
SalI GTCGAC 1 cut(s) 420
SapI GCTCTTC 1 cut(s) 289
SaqAI TTAA 8 cut(s) 80, 218, 315, 683, 773, 1089, 1940, 1961
SatI GCNGC 4 cut(s) 163, 431, 522, 1771
Sau3AI GATC 6 cut(s) 1215, 1266, 1402, 1426, 1531, 1944
Sau96I GGNCC 4 cut(s) 508, 913, 1525, 1616
ScaI AGTACT 1 cut(s) 1075
SchI GAGTC 2 cut(s) 961, 1885
ScrFI CCNGG 3 cut(s) 579, 1173, 1687
SduI GDGCHC 1 cut(s) 1454
SfaNI GCATC 8 cut(s) 82, 202, 313, 682, 1166, 1450, 1472, 1757
SfcI CTRYAG 1 cut(s) 525
SinI GGWCC 3 cut(s) 508, 913, 1525
SmiMI CAYNNNNRTG 1 cut(s) 1018
SmlI CTYRAG 4 cut(s) 512, 682, 772, 1905
SmoI CTYRAG 4 cut(s) 512, 682, 772, 1905
SpeI ACTAGT 1 cut(s) 1070
SsiI CCGC 4 cut(s) 349, 431, 1232, 1248
SspI AATATT 1 cut(s) 1975
SspMI CTAG 1 cut(s) 1071
StyD4I CCNGG 3 cut(s) 577, 1171, 1685
TaaI ACNGT 5 cut(s) 227, 419, 1163, 1955, 1988
TaqI TCGA 3 cut(s) 86, 421, 1211
TatI WGTACW 4 cut(s) 807, 1073, 1139, 1858
TauI GCSGC 1 cut(s) 433
TfiI GAWTC 7 cut(s) 98, 368, 971, 1288, 1421, 1829, 1844
Tru1I TTAA 8 cut(s) 80, 218, 315, 683, 773, 1089, 1940, 1961
Tru9I TTAA 8 cut(s) 80, 218, 315, 683, 773, 1089, 1940, 1961
TscAI CASTG 3 cut(s) 1168, 1257, 1668
TseFI GTSAC 1 cut(s) 1988
TseI GCWGC 3 cut(s) 162, 521, 1770
Tsp45I GTSAC 1 cut(s) 1988
TspGWI ACGGA 1 cut(s) 1534
TspRI CASTG 3 cut(s) 1168, 1257, 1668
Van91I CCANNNNNTGG 1 cut(s) 668
Vha464I CTTAAG 2 cut(s) 682, 772
VpaK11BI GGWCC 3 cut(s) 508, 913, 1525
VspI ATTAAT 1 cut(s) 1089
XapI RAATTY 6 cut(s) 306, 400, 1034, 1680, 1747, 2004
XceI RCATGY 1 cut(s) 1859
XcmI CCANNNNNNNNNTGG 4 cut(s) 907, 1187, 1693, 1822
XmiI GTMKAC 1 cut(s) 421
XspI CTAG 1 cut(s) 1071
ZrmI AGTACT 1 cut(s) 1075
Zsp2I ATGCAT 2 cut(s) 217, 1465
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.