Rw6G034280

Domain of unknown function (DUF3403)

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
Physical Location & Seq
Reverse (-)
58909497 .. 58914023
4527 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G034280.1

Sequence Viewer

Length: 2424 bp
ATGGCAATGGCTCTTCCTCTTATTATTTGCTTGATATTATTCTCAAGCTTGTTTCCATTTCCATGCCATGCAATCACAGACACGCTTACAGCTTCAGACTCGTTGAGCGACAACCAAACGCTGGTTTCTGCAGGCGGAGTCTTCGTCCTTGGCTTCTTCATCGATAGCTCTTCAGGTAATCACTATCTAGGTATATGGCTGAGAGCTGATGAAAACAGAGTTGTTTGGGTTGCCTACCGTGAAATACCTATATTGGACTCTTCCGGCGTGCTTCAAATCCGGTCTGGGAATCTGGTTGTCTCCGACCGGCGACAACTGCAGCTCATAGTCAACTCGGGAAACCTCGCCGCCACCACCACCAACACGAGTGCAACACTTCTTGATACGGGAAATCTTGTGCTTAAGGATGAAAATACAGGTACCACTGTATGGCAGAGCTTCGATGTACCAACAGACACATATCTTCCGGGCATGAAAGTTGGGTTGTTTGGCCTAAACACAAACCAACAAAGCTTTCGGATTCTCACTTCCTGGGAAAGCCCTCAAAACCCTAGTCGTGGCCTCTTCACCTTCTCTCTGGATAGAATAGACTTCACTAAAATTGATGTTTGGCGAGGAGATGGACTCCAAATGCATATCGCTTTCTGGGACGGAAATGATCTCCGGTTCATTTTCGAGAACACAAGCGCAAACAATGACTACAACTTTAGCTACACTTCCATTAATGGAAGTGAAGCCTACTACACTTTTAGCCACAACAAGAAGTATGACCTCATGTGGTTTGTAATGGCTTCAACAGGAAACCTAGACCAGTACTTCATGGTGAATGGGAAGATTACTTCTACGAGTCATGCTTTGTGTGAAGATTCAAGTGGTGGTAATAGTGGAAAGTGCTTGACTTCTTTACCACCTATGTGTGGTAATACTTTTAACCAGACGAATGGTTCGTTGCCATCGACTGTTAAGGTTGACTCAATTAATATAGGGGCTAATGATTGTGAGACTTTGTGCAAGAGCAATTGTTCTTGTACTGCATATGTTTCAGTTCAGAATGATCAATCGGTTTGTCAGCTTTATTATGGGAGTAAACAGGAGTTGATGAAGATGATGGAGATAGGGTCAGGGACTATCAACGTGCGTGTTTCTGCTAATACAAGTGATGGTAAGAAGTGGAAAAGGTGGCTGACTATCGTGCTCCCGGTGGTTTTCCTATCGGCTCTTATTTCAGTCTTCTTATTCTGTTATCTACGTTGGAGAAGAGGACCTCAAGGAAGTAGGCGAGAAGGGATTGTCATTTCGGATGAAGTGAGATTATTCCAAATTGGCTCCACCAATGCCTCACCAATTCAGTATGATCTAGCTAGGGTTGCCAATATGATGGAATTGAGCAGATCACAGAAGGATCAAGAACTGCCATTCTTTACTTTCTCTGCCATACAAACTGCAACAAATGACTTTGCAAAGGCTAATAAACTCGGGGAAGGTGGATTTGGGCCTGTCTACAAGGGGAAGCTATTAGAAGGACAGGAAATTGCAGTGAAAAGGTTGTCTGAACTGTCGAGGCAAGGGTTGGAGGAGTTCAAAAACGAGGTCTTAGTCATTTGTAAACTCCAACACAGGAATCTGGTTAGGATCTTGGGGTGCTGCATTGAAGGAGAAGAAAGTATACTAGTTTATGAGTACATGCCCAACAAAAGCTTAGATTCCTTCATTTTTGATCAAGCCAAACGGGTGCTTTTGGATTGGAAAAAGCGCATGAACATTATTGATGGGATTTCTCAAGGCCTTCTATATCTTCACAAATACTCAAGATTACGGATCATTCACCGCGATCTAAAGACCAGCAATATTTTGCTAGACAGCGACATGAACCCGAAAATTTCTGATTTTGGCATGGCAAGGATTTTTGGGGACAATGACACTAGAGGAAAAACAAACCGGGTTGTTGGTACATTTGGTTACATGTCTCCGGAGTATGCCATGGGCGGCCTATTTTCTGAAAAATCAGATGTGTTTAGCTTCGGGGTGATCTTATTAGAGGTCATTAGTGGGAAGAAGAACATTCCATTTTTTGAGTCTGATCAAGCTAGTCTAAACTTACTTGGCAATGCCTGGAATTTATGGAATGAAGGCAAGAGCATGGAGTTACTGGATTCAGCACTGGTTGCATCTTGTTCCAGCAGTGAAGTTATGAGGTGCATTCAGATGGGTCTTTTGTGCGTGCAAGAAAGAGCCATGGATCGACCTAATATGTCGGATGTGGCTTCGATGCTAAGCAATCAATCAATTCCTCTGCCTCTTCCAAAAGAACCTGCATTTTGGAGCCAGCTAAGTTCTACTGATGCAGATACATCTTCAAGCAGGCAAAGACATTACTCTACAATTGAGTCAACTCTAACTATTTCAGAAGTGCATGCAAGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

807

Amino Acids

89.97

Weight (kDa)

5.83

Isoelectric Point (pI)

48.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 74 - 178 4.2e-27 D-mannose binding lectin
Pkinase PF00069 487 - 695 5.9e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 489 - 757 3.8e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000509)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g29542 FvH4_2g29543 FvH4_2g29543 FvH4_2g29543 FvH4_2g29543 FvH4_2g29544 FvH4_2g29545 FvH4_2g29545 FvH4_2g29545 FvH4_2g29545 FvH4_2g29545 FvH4_2g29560
malus_domestica MD15G1121300.v1.1
prunus_persica Prupe.1G473900_v2.0.a1 Prupe.1G474000_v2.0.a1 Prupe.1G474000_v2.0.a1 Prupe.1G474000_v2.0.a1 Prupe.1G474000_v2.0.a1 Prupe.1G474100_v2.0.a1 Prupe.1G474300_v2.0.a1 Prupe.1G474500_v2.0.a1
rosa_chinensis RchiOBHm_Chr6g0298411 RchiOBHm_Chr6g0298421 RchiOBHm_Chr6g0298431 RchiOBHm_Chr6g0298441 RchiOBHm_Chr6g0298451 RchiOBHm_Chr6g0298461 RchiOBHm_Chr6g0298471 RchiOBHm_Chr6g0298481 RchiOBHm_Chr6g0298491 RchiOBHm_Chr6g0298501 RchiOBHm_Chr6g0298521
rosa_laevigata RLG00000011506 RLG00000011508 RLG00000011509 RLG00000011511 RLG00000011513 RLG00000011514 RLG00000011515
rosa_multiflora Rmu_co8314937.1_g000001 Rmu_co8319199.1_g000001 Rmu_sc0004500.1_g000002 Rmu_sc0006543.1_g000001 Rmu_ssc0000289.1_g000039 Rmu_ssc0000289.1_g000040 Rmu_ssc0000289.1_g000047 Rmu_ssc0000289.1_g000048 Rmu_ssc0000289.1_g000049 Rmu_ssc0000289.1_g000051
rosa_roxburghii Rroxscaffold_7G00169570 Rroxscaffold_7G00169580 Rroxscaffold_7G00169600 Rroxscaffold_7G00169610 Rroxscaffold_7G00169620 Rroxscaffold_7G00169630 Rroxscaffold_7G00169650 Rroxscaffold_7G00169660 Rroxscaffold_7G00169670
rosa_rugosa Rorug06G0280700 Rorug06G0280800 Rorug06G0280900
rosa_samantha Rh6AG391700 Rh6AG391800 Rh6AG392000 Rh6AG392100 Rh6AG392200 Rh6BG399300 Rh6BG399400 Rh6BG399500 Rh6BG399700 Rh6BG400000 Rh6CG405400 Rh6CG405500 Rh6CG405600 Rh6CG405700 Rh6CG405800 Rh6DG391800 Rh6DG391900 Rh6DG392000 Rh6DG392100 Rh6DG392300
rosa_wichuraiana Rw6G034230 Rw6G034240 Rw6G034250 Rw6G034260 Rw6G034270 Rw6G034280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 2320
Acc65I GGTACC 1 cut(s) 419
AccB1I GGYRCC 1 cut(s) 419
AccB7I CCANNNNNTGG 2 cut(s) 121, 429
AccI GTMKAC 2 cut(s) 1500, 1666
AccII CGCG 1 cut(s) 1830
AccIII TCCGGA 1 cut(s) 1969
AciI CCGC 4 cut(s) 135, 348, 1828, 1986
AclWI GGATC 4 cut(s) 1410, 1640, 1826, 2247
AcsI RAATTY 2 cut(s) 1878, 2116
AcuI CTGAAG 2 cut(s) 78, 156
AfaI GTAC 6 cut(s) 421, 447, 815, 1030, 1682, 1951
AfiI CCNNNNNNNGG 4 cut(s) 121, 429, 557, 917
AflII CTTAAG 1 cut(s) 401
AflIII ACRYGT 1 cut(s) 1962
AgsI TTSAA 6 cut(s) 275, 795, 870, 1582, 1652, 2358
AhlI ACTAGT 1 cut(s) 1669
AjnI CCWGG 2 cut(s) 530, 2111
AjuI GAANNNNNNNTTGG 4 cut(s) 498, 530, 1473, 1505
AleI CACNNNNGTG 1 cut(s) 913
Alw21I GWGCWC 1 cut(s) 1197
Alw26I GTCTC 3 cut(s) 304, 995, 1971
AlwI GGATC 4 cut(s) 1410, 1640, 1826, 2247
Ama87I CYCGRG 2 cut(s) 334, 1475
Aor13HI TCCGGA 1 cut(s) 1969
AoxI GGCC 5 cut(s) 490, 559, 1493, 1783, 1987
ApeKI GCWGC 2 cut(s) 319, 1644
ApoI RAATTY 2 cut(s) 1878, 2116
ArsI GACNNNNNNTTYG 6 cut(s) 538, 570, 928, 960, 1575, 1607
AseI ATTAAT 2 cut(s) 723, 978
Asp718I GGTACC 1 cut(s) 419
AspLEI GCGC 2 cut(s) 689, 1755
AspS9I GGNCC 2 cut(s) 1262, 1493
AsuC2I CCSGG 3 cut(s) 468, 1199, 1940
AsuHPI GGTGA 5 cut(s) 559, 835, 1332, 1817, 2038
AvaI CYCGRG 2 cut(s) 334, 1475
AvaII GGWCC 1 cut(s) 1262
BaeI ACNNNNGTAYC 2 cut(s) 411, 444
BanI GGYRCC 1 cut(s) 419
BarI GAAGNNNNNNTAC 2 cut(s) 1650, 1682
BauI CACGAG 1 cut(s) 364
BbsI GAAGAC 2 cut(s) 133, 1222
Bbv12I GWGCWC 1 cut(s) 1197
BbvI GCAGC 2 cut(s) 331, 1631
BccI CCATC 7 cut(s) 614, 961, 1102, 1154, 1372, 1763, 2200
BciT130I CCWGG 2 cut(s) 532, 2113
BclI TGATCA 3 cut(s) 1054, 1717, 2080
BcnI CCSGG 3 cut(s) 468, 1199, 1940
BcoDI GTCTC 3 cut(s) 304, 995, 1971
BcuI ACTAGT 1 cut(s) 1669
BfaI CTAG 9 cut(s) 188, 552, 806, 1358, 1362, 1670, 1856, 1923, 2088
BfmI CTRYAG 2 cut(s) 129, 317
BfrI CTTAAG 1 cut(s) 401
BfuAI ACCTGC 1 cut(s) 2320
BisI GCNGC 4 cut(s) 320, 348, 1645, 1987
BlpI GCTNAGC 1 cut(s) 2273
BlsI GCNGC 4 cut(s) 321, 349, 1646, 1988
BmcAI AGTACT 1 cut(s) 815
Bme1390I CCNGG 5 cut(s) 468, 532, 1199, 1940, 2113
Bme18I GGWCC 1 cut(s) 1262
BmeT110I CYCGRG 2 cut(s) 334, 1475
BmgT120I GGNCC 2 cut(s) 1262, 1493
BmiI GGNNCC 3 cut(s) 421, 1327, 2324
BmrFI CCNGG 5 cut(s) 468, 532, 1199, 1940, 2113
BmsI GCATC 3 cut(s) 2177, 2259, 2332
BpiI GAAGAC 2 cut(s) 133, 1222
BplI GAGNNNNNCTC 2 cut(s) 609, 641
Bpu1102I GCTNAGC 1 cut(s) 2273
BpuEI CTTGAG 4 cut(s) 28, 1251, 1764, 1792
BpuMI CCSGG 3 cut(s) 468, 1199, 1940
Bsa29I ATCGAT 1 cut(s) 162
BsaJI CCNNGG 4 cut(s) 148, 531, 1980, 2235
BsaWI WCCGGW 3 cut(s) 279, 663, 1969
BsaXI ACNNNNNCTCC 4 cut(s) 129, 159, 1103, 1133
Bsc4I CCNNNNNNNGG 4 cut(s) 121, 429, 557, 917
Bse118I RCCGGY 1 cut(s) 306
Bse1I ACTGG 3 cut(s) 811, 2154, 2166
Bse3DI GCAATG 2 cut(s) 12, 2113
BseAI TCCGGA 1 cut(s) 1969
BseBI CCWGG 2 cut(s) 532, 2113
BseCI ATCGAT 1 cut(s) 162
BseDI CCNNGG 4 cut(s) 148, 531, 1980, 2235
BseGI GGATG 3 cut(s) 412, 1306, 2263
BseLI CCNNNNNNNGG 4 cut(s) 121, 429, 557, 917
BseMI GCAATG 2 cut(s) 12, 2113
BseMII CTCAG 1 cut(s) 191
BseNI ACTGG 3 cut(s) 811, 2154, 2166
BseRI GAGGAG 2 cut(s) 630, 1589
BseXI GCAGC 2 cut(s) 331, 1631
Bsh1236I CGCG 1 cut(s) 1830
Bsh1285I CGRYCG 1 cut(s) 307
BshFI GGCC 5 cut(s) 492, 561, 1495, 1785, 1989
BshNI GGYRCC 1 cut(s) 419
BshVI ATCGAT 1 cut(s) 162
BsiEI CGRYCG 1 cut(s) 307
BsiHKAI GWGCWC 1 cut(s) 1197
BsiHKCI CYCGRG 2 cut(s) 334, 1475
BsiSI CCGG 8 cut(s) 264, 280, 307, 467, 664, 1199, 1939, 1970
BslFI GGGAC 3 cut(s) 662, 1138, 1925
BslI CCNNNNNNNGG 4 cut(s) 121, 429, 557, 917
BsmAI GTCTC 3 cut(s) 304, 995, 1971
BsmFI GGGAC 3 cut(s) 662, 1138, 1925
BsmI GAATGC 1 cut(s) 2199
BsnI GGCC 5 cut(s) 492, 561, 1495, 1785, 1989
BsoBI CYCGRG 2 cut(s) 334, 1475
Bsp1286I GDGCHC 1 cut(s) 1197
Bsp13I TCCGGA 1 cut(s) 1969
Bsp1720I GCTNAGC 1 cut(s) 2273
Bsp19I CCATGG 2 cut(s) 1980, 2235
BspACI CCGC 4 cut(s) 135, 348, 1828, 1986
BspANI GGCC 5 cut(s) 492, 561, 1495, 1785, 1989
BspCNI CTCAG 1 cut(s) 192
BspDI ATCGAT 1 cut(s) 162
BspEI TCCGGA 1 cut(s) 1969
BspFNI CGCG 1 cut(s) 1830
BspLI GGNNCC 3 cut(s) 421, 1327, 2324
BspMAI CTGCAG 2 cut(s) 133, 321
BspMI ACCTGC 1 cut(s) 2320
BspPI GGATC 4 cut(s) 1410, 1640, 1826, 2247
BspQI GCTCTTC 2 cut(s) 18, 175
BspT107I GGYRCC 1 cut(s) 419
BspTI CTTAAG 1 cut(s) 401
BsrDI GCAATG 2 cut(s) 12, 2113
BsrFI RCCGGY 1 cut(s) 306
BsrI ACTGG 3 cut(s) 811, 2154, 2166
BssAI RCCGGY 1 cut(s) 306
BssECI CCNNGG 4 cut(s) 148, 531, 1980, 2235
BssNAI GTATAC 1 cut(s) 1667
BssSI CACGAG 1 cut(s) 364
BssT1I CCWWGG 3 cut(s) 148, 1980, 2235
Bst1107I GTATAC 1 cut(s) 1667
Bst2BI CACGAG 1 cut(s) 364
Bst2UI CCWGG 2 cut(s) 532, 2113
Bst4CI ACNGT 4 cut(s) 239, 427, 961, 1557
Bst6I CTCTTC 6 cut(s) 18, 175, 265, 569, 1252, 2304
BstAFI CTTAAG 1 cut(s) 401
BstAPI GCANNNNNTGC 1 cut(s) 2165
BstC8I GCNNGC 6 cut(s) 133, 269, 2222, 2327, 2363, 2415
BstDEI CTNAG 5 cut(s) 200, 1594, 1699, 2273, 2330
BstDSI CCRYGG 2 cut(s) 1980, 2235
BstF5I GGATG 3 cut(s) 412, 1306, 2263
BstFNI CGCG 1 cut(s) 1830
BstHHI GCGC 2 cut(s) 689, 1755
BstMAI GTCTC 3 cut(s) 304, 995, 1971
BstMCI CGRYCG 1 cut(s) 307
BstMWI GCNNNNNNNGC 3 cut(s) 316, 1367, 2165
BstNI CCWGG 2 cut(s) 532, 2113
BstNSI RCATGY 3 cut(s) 1687, 1966, 2417
BstSCI CCNGG 5 cut(s) 466, 530, 1197, 1938, 2111
BstSFI CTRYAG 2 cut(s) 129, 317
BstUI CGCG 1 cut(s) 1830
BstV1I GCAGC 2 cut(s) 331, 1631
BstV2I GAAGAC 2 cut(s) 133, 1222
BstX2I RGATCY 1 cut(s) 1632
BstXI CCANNNNNNTGG 2 cut(s) 941, 1378
BstYI RGATCY 1 cut(s) 1632
BstZ17I GTATAC 1 cut(s) 1667
Bsu15I ATCGAT 1 cut(s) 162
BsuRI GGCC 5 cut(s) 492, 561, 1495, 1785, 1989
BsuTUI ATCGAT 1 cut(s) 162
BtgI CCRYGG 2 cut(s) 1980, 2235
BtsCI GGATG 3 cut(s) 412, 1306, 2263
BtsI GCAGTG 2 cut(s) 1542, 2188
BtsIMutI CAGTG 4 cut(s) 423, 1542, 2159, 2188
BveI ACCTGC 1 cut(s) 2320
Cac8I GCNNGC 6 cut(s) 133, 269, 2222, 2327, 2363, 2415
CfoI GCGC 2 cut(s) 689, 1755
Cfr10I RCCGGY 1 cut(s) 306
Cfr13I GGNCC 2 cut(s) 1262, 1493
ClaI ATCGAT 1 cut(s) 162
Csp6I GTAC 6 cut(s) 420, 446, 814, 1029, 1681, 1950
CviQI GTAC 6 cut(s) 420, 446, 814, 1029, 1681, 1950
DdeI CTNAG 5 cut(s) 200, 1594, 1699, 2273, 2330
Eam1104I CTCTTC 6 cut(s) 18, 175, 265, 569, 1252, 2304
EarI CTCTTC 6 cut(s) 18, 175, 265, 569, 1252, 2304
EciI GGCGGA 1 cut(s) 150
Eco130I CCWWGG 3 cut(s) 148, 1980, 2235
Eco147I AGGCCT 1 cut(s) 1785
Eco47I GGWCC 1 cut(s) 1262
Eco57I CTGAAG 2 cut(s) 78, 156
Eco88I CYCGRG 2 cut(s) 334, 1475
EcoO109I RGGNCCY 1 cut(s) 1262
EcoRII CCWGG 2 cut(s) 530, 2111
EcoT14I CCWWGG 3 cut(s) 148, 1980, 2235
EcoT22I ATGCAT 1 cut(s) 636
ErhI CCWWGG 3 cut(s) 148, 1980, 2235
FaqI GGGAC 3 cut(s) 662, 1138, 1925
FauNDI CATATG 1 cut(s) 1036
FbaI TGATCA 3 cut(s) 1054, 1717, 2080
FblI GTMKAC 2 cut(s) 1500, 1666
Fnu4HI GCNGC 4 cut(s) 320, 348, 1645, 1987
FokI GGATG 3 cut(s) 419, 1313, 2270
Fsp4HI GCNGC 4 cut(s) 320, 348, 1645, 1987
FspBI CTAG 9 cut(s) 188, 552, 806, 1358, 1362, 1670, 1856, 1923, 2088
GlaI GCGC 2 cut(s) 688, 1754
GluI GCNGC 4 cut(s) 320, 348, 1645, 1987
HaeIII GGCC 5 cut(s) 492, 561, 1495, 1785, 1989
HapII CCGG 8 cut(s) 264, 280, 307, 467, 664, 1199, 1939, 1970
HhaI GCGC 2 cut(s) 689, 1755
Hin6I GCGC 2 cut(s) 687, 1753
HinP1I GCGC 2 cut(s) 687, 1753
HincII GTYRAC 3 cut(s) 331, 970, 2391
HindII GTYRAC 3 cut(s) 331, 970, 2391
HindIII AAGCTT 3 cut(s) 46, 511, 1696
HpaII CCGG 8 cut(s) 264, 280, 307, 467, 664, 1199, 1939, 1970
HphI GGTGA 5 cut(s) 559, 835, 1332, 1817, 2038
Hpy166II GTNNAC 7 cut(s) 331, 970, 1088, 1501, 1607, 1667, 2391
Hpy188III TCNNGA 7 cut(s) 336, 380, 578, 676, 1406, 1809, 1970
Hpy8I GTNNAC 7 cut(s) 331, 970, 1088, 1501, 1607, 1667, 2391
HpyAV CCTTC 9 cut(s) 580, 1277, 1393, 1475, 1514, 1646, 1717, 1796, 2123
HpyCH4III ACNGT 4 cut(s) 239, 427, 961, 1557
HpyCH4IV ACGT 2 cut(s) 1134, 1249
HpyF10VI GCNNNNNNNGC 3 cut(s) 316, 1367, 2165
HpyF3I CTNAG 5 cut(s) 200, 1594, 1699, 2273, 2330
HpySE526I ACGT 2 cut(s) 1134, 1249
HspAI GCGC 2 cut(s) 687, 1753
Kpn2I TCCGGA 1 cut(s) 1969
KpnI GGTACC 1 cut(s) 423
Ksp22I TGATCA 3 cut(s) 1054, 1717, 2080
LguI GCTCTTC 2 cut(s) 18, 175
LmnI GCTCC 3 cut(s) 1200, 1331, 2322
Lsp1109I GCAGC 2 cut(s) 331, 1631
LweI GCATC 3 cut(s) 2177, 2259, 2332
MaeI CTAG 9 cut(s) 188, 552, 806, 1358, 1362, 1670, 1856, 1923, 2088
MaeII ACGT 2 cut(s) 1134, 1249
MaeIII GTNAC 2 cut(s) 1958, 2145
MfeI CAATTG 2 cut(s) 1018, 2382
MflI RGATCY 1 cut(s) 1632
MhlI GDGCHC 1 cut(s) 1197
MlyI GAGTC 8 cut(s) 92, 147, 251, 618, 856, 965, 2084, 2396
MmeI TCCRAC 5 cut(s) 327, 1232, 1551, 1636, 2235
Mph1103I ATGCAT 1 cut(s) 636
MroI TCCGGA 1 cut(s) 1969
MseI TTAA 5 cut(s) 402, 723, 930, 963, 978
MslI CAYNNNNRTG 3 cut(s) 61, 913, 2204
MspCI CTTAAG 1 cut(s) 401
MspI CCGG 8 cut(s) 264, 280, 307, 467, 664, 1199, 1939, 1970
MspR9I CCNGG 5 cut(s) 468, 532, 1199, 1940, 2113
MunI CAATTG 2 cut(s) 1018, 2382
Mva1269I GAATGC 1 cut(s) 2199
MvaI CCWGG 2 cut(s) 532, 2113
MvnI CGCG 1 cut(s) 1830
MwoI GCNNNNNNNGC 3 cut(s) 316, 1367, 2165
NciI CCSGG 3 cut(s) 468, 1199, 1940
NcoI CCATGG 2 cut(s) 1980, 2235
NdeI CATATG 1 cut(s) 1036
NlaIV GGNNCC 3 cut(s) 421, 1327, 2324
NsiI ATGCAT 1 cut(s) 636
NspI RCATGY 3 cut(s) 1687, 1966, 2417
OliI CACNNNNGTG 1 cut(s) 913
PaeI GCATGC 1 cut(s) 2417
PceI AGGCCT 1 cut(s) 1785
PciI ACATGT 1 cut(s) 1962
PciSI GCTCTTC 2 cut(s) 18, 175
PcsI WCGNNNNNNNCGW 2 cut(s) 944, 953
PctI GAATGC 1 cut(s) 2199
PfeI GAWTC 6 cut(s) 289, 520, 866, 1621, 1703, 2153
PflMI CCANNNNNTGG 2 cut(s) 121, 429
PkrI GCNGC 4 cut(s) 321, 349, 1646, 1988
PleI GAGTC 8 cut(s) 92, 146, 251, 618, 855, 965, 2083, 2395
PpsI GAGTC 8 cut(s) 92, 146, 251, 618, 855, 965, 2083, 2395
PpuMI RGGWCCY 1 cut(s) 1262
PscI ACATGT 1 cut(s) 1962
PshBI ATTAAT 2 cut(s) 723, 978
Psp5II RGGWCCY 1 cut(s) 1262
Psp6I CCWGG 2 cut(s) 530, 2111
PspGI CCWGG 2 cut(s) 530, 2111
PspN4I GGNNCC 3 cut(s) 421, 1327, 2324
PspPI GGNCC 2 cut(s) 1262, 1493
PspPPI RGGWCCY 1 cut(s) 1262
PstI CTGCAG 2 cut(s) 133, 321
PsuI RGATCY 1 cut(s) 1632
RsaI GTAC 6 cut(s) 421, 447, 815, 1030, 1682, 1951
RsaNI GTAC 6 cut(s) 420, 446, 814, 1029, 1681, 1950
RseI CAYNNNNRTG 3 cut(s) 61, 913, 2204
SapI GCTCTTC 2 cut(s) 18, 175
SaqAI TTAA 5 cut(s) 402, 723, 930, 963, 978
SatI GCNGC 4 cut(s) 320, 348, 1645, 1987
Sau96I GGNCC 2 cut(s) 1262, 1493
ScaI AGTACT 1 cut(s) 815
SchI GAGTC 8 cut(s) 92, 147, 251, 618, 856, 965, 2084, 2396
ScrFI CCNGG 5 cut(s) 468, 532, 1199, 1940, 2113
SduI GDGCHC 1 cut(s) 1197
SfaNI GCATC 3 cut(s) 2177, 2259, 2332
SfcI CTRYAG 2 cut(s) 129, 317
SinI GGWCC 1 cut(s) 1262
SmiMI CAYNNNNRTG 3 cut(s) 61, 913, 2204
SmlI CTYRAG 5 cut(s) 43, 401, 1266, 1779, 1807
SmoI CTYRAG 5 cut(s) 43, 401, 1266, 1779, 1807
SpeI ACTAGT 1 cut(s) 1669
SphI GCATGC 1 cut(s) 2417
SseBI AGGCCT 1 cut(s) 1785
SsiI CCGC 4 cut(s) 135, 348, 1828, 1986
SspI AATATT 1 cut(s) 1849
SspMI CTAG 9 cut(s) 188, 552, 806, 1358, 1362, 1670, 1856, 1923, 2088
StuI AGGCCT 1 cut(s) 1785
StyD4I CCNGG 5 cut(s) 466, 530, 1197, 1938, 2111
StyI CCWWGG 3 cut(s) 148, 1980, 2235
TaaI ACNGT 4 cut(s) 239, 427, 961, 1557
TaiI ACGT 2 cut(s) 1137, 1252
TaqI TCGA 7 cut(s) 162, 441, 675, 956, 1559, 2242, 2267
TatI WGTACW 3 cut(s) 813, 1028, 1680
TauI GCSGC 2 cut(s) 350, 1989
TfiI GAWTC 6 cut(s) 289, 520, 866, 1621, 1703, 2153
Tru1I TTAA 5 cut(s) 402, 723, 930, 963, 978
Tru9I TTAA 5 cut(s) 402, 723, 930, 963, 978
TscAI CASTG 4 cut(s) 430, 1542, 2166, 2188
TseI GCWGC 2 cut(s) 319, 1644
TspGWI ACGGA 2 cut(s) 666, 1831
TspRI CASTG 4 cut(s) 430, 1542, 2166, 2188
Van91I CCANNNNNTGG 2 cut(s) 121, 429
Vha464I CTTAAG 1 cut(s) 401
VpaK11BI GGWCC 1 cut(s) 1262
VspI ATTAAT 2 cut(s) 723, 978
XapI RAATTY 2 cut(s) 1878, 2116
XceI RCATGY 3 cut(s) 1687, 1966, 2417
XmiI GTMKAC 2 cut(s) 1500, 1666
XspI CTAG 9 cut(s) 188, 552, 806, 1358, 1362, 1670, 1856, 1923, 2088
ZrmI AGTACT 1 cut(s) 815
Zsp2I ATGCAT 1 cut(s) 636
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.