Rh6DG392300

Domain of unknown function (DUF3403)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
OG0000509
Physical Location & Seq
Reverse (-)
58453879 .. 58458364
4486 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG392300.1

Sequence Viewer

Length: 1818 bp
ATGGCAATGGCTCTTCCTCTTATTATTTGCTTGATATTATTCTCAAGCTTGTTTCCATTTCCATGCCATGCAATCACAGACACGCTCACAGCTTCAGACTCGTTGAGCGACAACCAAACGCTGGTTTCTGCAGGCGGAGTCTTCGTCCTTGGCTTCTTCATCGATAGCTCTTCAGGTAATCACTATCTAGGTATATGGCTGAGAGCTGATGCAAAGAGAGTTGTTTGGGTTGCCTACCGTGAAATACCTATATTGGACTCTTCCGGCGTGCTTCAAATCCGGTCAGGGAATCTGGTTGTCTCCGACCGGCGACAACTGCAGCTCATAGTCAACTCGGGAAACGTTGCCACCACCTCCAACACGAGTGCAACACTTCTTGATACCGGAAATCTTGTGCTCAAGAATGAAAATAATGGTACCACTATATGGCAAAGCTTCGATGTTCCAACTGATACATATCTTCCGGGGATGAAGGTTGGGTTGTTTGGCCTAAACACAACCGAACAAAGCTTTCGGATTCTCACTTCCTGGGAAAGCCCTCAAAACCCTAGTCGTGGCCTCTTCACCTTCTCGCTGGATAGAATAGACTTCACTAAAATTGATGTTTGGCGAGGAGATGGACTCCAAATGCACATCGCTTTCTGGGACGGACATGATCTCCGGTTCATTTTCGAGAACACAACCGCAAACAATGACTACAACTTTAGCTACACTTCCGTTAATGGAAGTGAAGCCTACTACACTTTTAGCCACAACAAGAAGTATGACCTCATGTGGTTTGTAATGGCTTCAACAGGAAACCTAGACCAGTACTTCATGGTGAATGGGAAGATTACTTCTACGAGTCATGCTTTGTGTGAAGATTCAAGTGGTGGTAATAGTGGAAAGTGCTTGACTTCTTTGCCACCTATGTGTGGTAATACTTTTAACCAGAGGAACGGTTCATTGCCGTCGACGGTTAAGGTTGAATCAATTAATATAGGGGCTAATGATTGTGAGACTTTGTGCAAGAGCAATTGTTCTTGTACTGCATATGTTTCAATTCAGAATGAACAGTCGGTTTGTCAACTTTATTATGGGAGTAAACAGGAGTTGATGAAGATCATGGAGATAGGGTCAGGGACTATCAACGTTCGTGGTTCTGCTAATACAAGTGATGGTAAGAAGTGGAAAAGGTGGTTGACTATCGTGCTCCCGGTGGTTTTCCTCTTGGCTCTTATTTCAGTCTTCTTATTCTGCTATCTACGTTGGAGAAGAGGACCTAAAGGAAGTAGGCGAGAAGGGATTGTCATTTCGGATGAAGTGAGATTATTCCAAATTGGCTCCACCAATGCCTCACCAATTCAGTATGATCTAGCTAGGGTTTCAAATCTGATGGAATTGAGCAGATCACAGAAGGATCAAGAACTGCCATTCTTTACTTTCTCTGCCATAAAAACTGCAACAAATGACTTTGCAAAGGCTAATAAACTCGGGGAAGGTGGATTTGGGCCTGTCTACAAGGCCTGGAATTTATGGAATGAAGGCAACAGCATGGAGTTACTGGATTCAGCACTGGTTGCATCTTGTTCCAGCAGTGAAGTTATGAGGTGCATTCAGTTGGGTCTTTTGTGCGTGCAAGAAAGAGCCATGGATCGACCTAATATGTCGGACGTGACTTCGATGCTAAGCAATCAATCAATTCCTCTGCCTCTTCCTAAAGAACCTGCATTTTGGAGCCAGCTAAGTTCCACTGATACAGATACATCTTCAAGCAGGCAAAGACATTACTCTACAATTGAGTCAACTCTAACTATTTCAGAAGTGCATGCAAGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin DUF3403 PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

605

Amino Acids

67.09

Weight (kDa)

5.97

Isoelectric Point (pI)

46.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 74 - 177 6.4e-27 D-mannose binding lectin
PAN_2 PF08276 314 - 357 7.7e-06 PAN-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000509)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g29542 FvH4_2g29543 FvH4_2g29543 FvH4_2g29543 FvH4_2g29543 FvH4_2g29544 FvH4_2g29545 FvH4_2g29545 FvH4_2g29545 FvH4_2g29545 FvH4_2g29545 FvH4_2g29560
malus_domestica MD15G1121300.v1.1
prunus_persica Prupe.1G473900_v2.0.a1 Prupe.1G474000_v2.0.a1 Prupe.1G474000_v2.0.a1 Prupe.1G474000_v2.0.a1 Prupe.1G474000_v2.0.a1 Prupe.1G474100_v2.0.a1 Prupe.1G474300_v2.0.a1 Prupe.1G474500_v2.0.a1
rosa_chinensis RchiOBHm_Chr6g0298411 RchiOBHm_Chr6g0298421 RchiOBHm_Chr6g0298431 RchiOBHm_Chr6g0298441 RchiOBHm_Chr6g0298451 RchiOBHm_Chr6g0298461 RchiOBHm_Chr6g0298471 RchiOBHm_Chr6g0298481 RchiOBHm_Chr6g0298491 RchiOBHm_Chr6g0298501 RchiOBHm_Chr6g0298521
rosa_laevigata RLG00000011506 RLG00000011508 RLG00000011509 RLG00000011511 RLG00000011513 RLG00000011514 RLG00000011515
rosa_multiflora Rmu_co8314937.1_g000001 Rmu_co8319199.1_g000001 Rmu_sc0004500.1_g000002 Rmu_sc0006543.1_g000001 Rmu_ssc0000289.1_g000039 Rmu_ssc0000289.1_g000040 Rmu_ssc0000289.1_g000047 Rmu_ssc0000289.1_g000048 Rmu_ssc0000289.1_g000049 Rmu_ssc0000289.1_g000051
rosa_roxburghii Rroxscaffold_7G00169570 Rroxscaffold_7G00169580 Rroxscaffold_7G00169600 Rroxscaffold_7G00169610 Rroxscaffold_7G00169620 Rroxscaffold_7G00169630 Rroxscaffold_7G00169650 Rroxscaffold_7G00169660 Rroxscaffold_7G00169670
rosa_rugosa Rorug06G0280700 Rorug06G0280800 Rorug06G0280900
rosa_samantha Rh6AG391700 Rh6AG391800 Rh6AG392000 Rh6AG392100 Rh6AG392200 Rh6BG399300 Rh6BG399400 Rh6BG399500 Rh6BG399700 Rh6BG400000 Rh6CG405400 Rh6CG405500 Rh6CG405600 Rh6CG405700 Rh6CG405800 Rh6DG391800 Rh6DG391900 Rh6DG392000 Rh6DG392100 Rh6DG392300
rosa_wichuraiana Rw6G034230 Rw6G034240 Rw6G034250 Rw6G034260 Rw6G034270 Rw6G034280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1714
Acc65I GGTACC 1 cut(s) 416
AccB1I GGYRCC 1 cut(s) 416
AccB7I CCANNNNNTGG 2 cut(s) 121, 426
AccI GTMKAC 2 cut(s) 953, 1497
AciI CCGC 2 cut(s) 135, 684
AclI AACGTT 2 cut(s) 342, 1131
AclWI GGATC 2 cut(s) 1407, 1641
AcsI RAATTY 1 cut(s) 1510
AcuI CTGAAG 2 cut(s) 78, 156
AfaI GTAC 3 cut(s) 418, 812, 1027
AfiI CCNNNNNNNGG 4 cut(s) 121, 426, 554, 914
AgsI TTSAA 7 cut(s) 275, 792, 867, 968, 1041, 1368, 1752
AjiI CACGTC 1 cut(s) 1654
AjnI CCWGG 2 cut(s) 527, 1505
AjuI GAANNNNNNNTTGG 2 cut(s) 1470, 1502
AleI CACNNNNGTG 1 cut(s) 910
Alw21I GWGCWC 2 cut(s) 399, 1194
Alw26I GTCTC 2 cut(s) 304, 992
AlwI GGATC 2 cut(s) 1407, 1641
Ama87I CYCGRG 2 cut(s) 334, 1472
AoxI GGCC 4 cut(s) 487, 556, 1490, 1503
ApeKI GCWGC 1 cut(s) 319
ApoI RAATTY 1 cut(s) 1510
ArsI GACNNNNNNTTYG 2 cut(s) 535, 567
AseI ATTAAT 1 cut(s) 975
Asp718I GGTACC 1 cut(s) 416
AspS9I GGNCC 2 cut(s) 1259, 1490
AsuC2I CCSGG 2 cut(s) 465, 1196
AsuHPI GGTGA 3 cut(s) 556, 832, 1329
AvaI CYCGRG 2 cut(s) 334, 1472
AvaII GGWCC 1 cut(s) 1259
BanI GGYRCC 1 cut(s) 416
BauI CACGAG 1 cut(s) 361
BbsI GAAGAC 2 cut(s) 133, 1219
Bbv12I GWGCWC 2 cut(s) 399, 1194
BbvI GCAGC 1 cut(s) 331
BccI CCATC 3 cut(s) 611, 1151, 1369
BceAI ACGGC 1 cut(s) 934
BciT130I CCWGG 2 cut(s) 529, 1507
BcnI CCSGG 2 cut(s) 465, 1196
BcoDI GTCTC 2 cut(s) 304, 992
BfaI CTAG 5 cut(s) 188, 549, 803, 1355, 1359
BfmI CTRYAG 2 cut(s) 129, 317
BfuAI ACCTGC 1 cut(s) 1714
BisI GCNGC 1 cut(s) 320
BlpI GCTNAGC 1 cut(s) 1667
BlsI GCNGC 1 cut(s) 321
BmcAI AGTACT 1 cut(s) 812
Bme1390I CCNGG 4 cut(s) 465, 529, 1196, 1507
Bme18I GGWCC 1 cut(s) 1259
BmeT110I CYCGRG 2 cut(s) 334, 1472
BmgBI CACGTC 1 cut(s) 1654
BmgT120I GGNCC 2 cut(s) 1259, 1490
BmiI GGNNCC 3 cut(s) 418, 1324, 1718
BmrFI CCNGG 4 cut(s) 465, 529, 1196, 1507
BmsI GCATC 3 cut(s) 199, 1571, 1653
BpiI GAAGAC 2 cut(s) 133, 1219
BplI GAGNNNNNCTC 2 cut(s) 606, 638
Bpu1102I GCTNAGC 1 cut(s) 1667
BpuEI CTTGAG 2 cut(s) 28, 383
BpuMI CCSGG 2 cut(s) 465, 1196
Bsa29I ATCGAT 1 cut(s) 162
BsaBI GATNNNNATC 2 cut(s) 456, 1100
BsaJI CCNNGG 4 cut(s) 148, 464, 528, 1629
BsaWI WCCGGW 3 cut(s) 279, 383, 660
BsaXI ACNNNNNCTCC 6 cut(s) 129, 159, 642, 672, 1100, 1130
Bsc4I CCNNNNNNNGG 4 cut(s) 121, 426, 554, 914
Bse118I RCCGGY 1 cut(s) 306
Bse1I ACTGG 3 cut(s) 808, 1548, 1560
Bse3DI GCAATG 2 cut(s) 12, 944
Bse8I GATNNNNATC 2 cut(s) 456, 1100
BseBI CCWGG 2 cut(s) 529, 1507
BseCI ATCGAT 1 cut(s) 162
BseDI CCNNGG 4 cut(s) 148, 464, 528, 1629
BseGI GGATG 2 cut(s) 474, 1303
BseJI GATNNNNATC 2 cut(s) 456, 1100
BseLI CCNNNNNNNGG 4 cut(s) 121, 426, 554, 914
BseMI GCAATG 2 cut(s) 12, 944
BseMII CTCAG 1 cut(s) 191
BseNI ACTGG 3 cut(s) 808, 1548, 1560
BseRI GAGGAG 1 cut(s) 627
BseXI GCAGC 1 cut(s) 331
Bsh1285I CGRYCG 1 cut(s) 307
BshFI GGCC 4 cut(s) 489, 558, 1492, 1505
BshNI GGYRCC 1 cut(s) 416
BshVI ATCGAT 1 cut(s) 162
BsiEI CGRYCG 1 cut(s) 307
BsiHKAI GWGCWC 2 cut(s) 399, 1194
BsiHKCI CYCGRG 2 cut(s) 334, 1472
BsiSI CCGG 7 cut(s) 264, 280, 307, 384, 464, 661, 1196
BslFI GGGAC 2 cut(s) 659, 1135
BslI CCNNNNNNNGG 4 cut(s) 121, 426, 554, 914
BsmAI GTCTC 2 cut(s) 304, 992
BsmFI GGGAC 2 cut(s) 659, 1135
BsmI GAATGC 1 cut(s) 1593
BsnI GGCC 4 cut(s) 489, 558, 1492, 1505
BsoBI CYCGRG 2 cut(s) 334, 1472
Bsp1286I GDGCHC 2 cut(s) 399, 1194
Bsp143I GATC 6 cut(s) 655, 1101, 1351, 1388, 1399, 1633
Bsp1720I GCTNAGC 1 cut(s) 1667
Bsp19I CCATGG 1 cut(s) 1629
BspACI CCGC 2 cut(s) 135, 684
BspANI GGCC 4 cut(s) 489, 558, 1492, 1505
BspCNI CTCAG 1 cut(s) 192
BspDI ATCGAT 1 cut(s) 162
BspLI GGNNCC 3 cut(s) 418, 1324, 1718
BspMAI CTGCAG 2 cut(s) 133, 321
BspMI ACCTGC 1 cut(s) 1714
BspPI GGATC 2 cut(s) 1407, 1641
BspQI GCTCTTC 2 cut(s) 18, 175
BspT107I GGYRCC 1 cut(s) 416
BsrDI GCAATG 2 cut(s) 12, 944
BsrFI RCCGGY 1 cut(s) 306
BsrI ACTGG 3 cut(s) 808, 1548, 1560
BssAI RCCGGY 1 cut(s) 306
BssECI CCNNGG 4 cut(s) 148, 464, 528, 1629
BssMI GATC 6 cut(s) 655, 1101, 1351, 1388, 1399, 1633
BssSI CACGAG 1 cut(s) 361
BssT1I CCWWGG 2 cut(s) 148, 1629
Bst2BI CACGAG 1 cut(s) 361
Bst2UI CCWGG 2 cut(s) 529, 1507
Bst4CI ACNGT 4 cut(s) 239, 941, 958, 1056
Bst6I CTCTTC 6 cut(s) 18, 175, 265, 566, 1249, 1698
BstAPI GCANNNNNTGC 1 cut(s) 1559
BstC8I GCNNGC 6 cut(s) 133, 269, 1616, 1721, 1757, 1809
BstDEI CTNAG 3 cut(s) 200, 1667, 1724
BstDSI CCRYGG 1 cut(s) 1629
BstF5I GGATG 2 cut(s) 474, 1303
BstKTI GATC 6 cut(s) 658, 1104, 1354, 1391, 1402, 1636
BstMAI GTCTC 2 cut(s) 304, 992
BstMBI GATC 6 cut(s) 655, 1101, 1351, 1388, 1399, 1633
BstMCI CGRYCG 1 cut(s) 307
BstMWI GCNNNNNNNGC 2 cut(s) 316, 1559
BstNI CCWGG 2 cut(s) 529, 1507
BstNSI RCATGY 1 cut(s) 1811
BstSCI CCNGG 4 cut(s) 463, 527, 1194, 1505
BstSFI CTRYAG 2 cut(s) 129, 317
BstV1I GCAGC 1 cut(s) 331
BstV2I GAAGAC 2 cut(s) 133, 1219
Bsu15I ATCGAT 1 cut(s) 162
BsuRI GGCC 4 cut(s) 489, 558, 1492, 1505
BsuTUI ATCGAT 1 cut(s) 162
BtgI CCRYGG 1 cut(s) 1629
BtgZI GCGATG 1 cut(s) 619
BtrI CACGTC 1 cut(s) 1654
BtsCI GGATG 2 cut(s) 474, 1303
BtsI GCAGTG 1 cut(s) 1582
BtsIMutI CAGTG 3 cut(s) 1553, 1582, 1731
BveI ACCTGC 1 cut(s) 1714
Cac8I GCNNGC 6 cut(s) 133, 269, 1616, 1721, 1757, 1809
Cfr10I RCCGGY 1 cut(s) 306
Cfr13I GGNCC 2 cut(s) 1259, 1490
ClaI ATCGAT 1 cut(s) 162
Csp6I GTAC 3 cut(s) 417, 811, 1026
CspCI CAANNNNNGTGG 2 cut(s) 1117, 1152
CviQI GTAC 3 cut(s) 417, 811, 1026
DdeI CTNAG 3 cut(s) 200, 1667, 1724
DpnI GATC 6 cut(s) 657, 1103, 1353, 1390, 1401, 1635
DpnII GATC 6 cut(s) 655, 1101, 1351, 1388, 1399, 1633
Eam1104I CTCTTC 6 cut(s) 18, 175, 265, 566, 1249, 1698
EarI CTCTTC 6 cut(s) 18, 175, 265, 566, 1249, 1698
EciI GGCGGA 1 cut(s) 150
Eco130I CCWWGG 2 cut(s) 148, 1629
Eco147I AGGCCT 1 cut(s) 1505
Eco47I GGWCC 1 cut(s) 1259
Eco57I CTGAAG 2 cut(s) 78, 156
Eco88I CYCGRG 2 cut(s) 334, 1472
EcoO109I RGGNCCY 1 cut(s) 1259
EcoRII CCWGG 2 cut(s) 527, 1505
EcoT14I CCWWGG 2 cut(s) 148, 1629
ErhI CCWWGG 2 cut(s) 148, 1629
FaqI GGGAC 2 cut(s) 659, 1135
FauNDI CATATG 1 cut(s) 1033
FblI GTMKAC 2 cut(s) 953, 1497
Fnu4HI GCNGC 1 cut(s) 320
FokI GGATG 2 cut(s) 481, 1310
Fsp4HI GCNGC 1 cut(s) 320
FspBI CTAG 5 cut(s) 188, 549, 803, 1355, 1359
GluI GCNGC 1 cut(s) 320
HaeIII GGCC 4 cut(s) 489, 558, 1492, 1505
HapII CCGG 7 cut(s) 264, 280, 307, 384, 464, 661, 1196
HincII GTYRAC 5 cut(s) 331, 954, 1067, 1182, 1785
HindII GTYRAC 5 cut(s) 331, 954, 1067, 1182, 1785
HindIII AAGCTT 3 cut(s) 46, 433, 508
HpaII CCGG 7 cut(s) 264, 280, 307, 384, 464, 661, 1196
HphI GGTGA 3 cut(s) 556, 832, 1329
Hpy166II GTNNAC 7 cut(s) 331, 954, 1067, 1085, 1182, 1498, 1785
Hpy188I TCNGA 8 cut(s) 97, 304, 516, 1047, 1297, 1374, 1651, 1801
Hpy188III TCNNGA 5 cut(s) 336, 377, 400, 673, 1403
Hpy8I GTNNAC 7 cut(s) 331, 954, 1067, 1085, 1182, 1498, 1785
Hpy99I CGWCG 2 cut(s) 955, 958
HpyAV CCTTC 6 cut(s) 466, 577, 1274, 1390, 1472, 1517
HpyCH4III ACNGT 4 cut(s) 239, 941, 958, 1056
HpyCH4IV ACGT 4 cut(s) 342, 1131, 1246, 1653
HpyF10VI GCNNNNNNNGC 2 cut(s) 316, 1559
HpyF3I CTNAG 3 cut(s) 200, 1667, 1724
HpySE526I ACGT 4 cut(s) 342, 1131, 1246, 1653
KpnI GGTACC 1 cut(s) 420
Kzo9I GATC 6 cut(s) 655, 1101, 1351, 1388, 1399, 1633
LguI GCTCTTC 2 cut(s) 18, 175
LmnI GCTCC 3 cut(s) 1197, 1328, 1716
Lsp1109I GCAGC 1 cut(s) 331
LweI GCATC 3 cut(s) 199, 1571, 1653
MaeI CTAG 5 cut(s) 188, 549, 803, 1355, 1359
MaeII ACGT 4 cut(s) 342, 1131, 1246, 1653
MaeIII GTNAC 2 cut(s) 1539, 1654
MalI GATC 6 cut(s) 657, 1103, 1353, 1390, 1401, 1635
MboI GATC 6 cut(s) 655, 1101, 1351, 1388, 1399, 1633
MfeI CAATTG 2 cut(s) 1015, 1776
MhlI GDGCHC 2 cut(s) 399, 1194
MlyI GAGTC 6 cut(s) 92, 147, 251, 615, 853, 1790
MmeI TCCRAC 5 cut(s) 327, 381, 470, 1229, 1629
MseI TTAA 4 cut(s) 720, 927, 960, 975
MslI CAYNNNNRTG 2 cut(s) 61, 910
MspI CCGG 7 cut(s) 264, 280, 307, 384, 464, 661, 1196
MspR9I CCNGG 4 cut(s) 465, 529, 1196, 1507
MunI CAATTG 2 cut(s) 1015, 1776
Mva1269I GAATGC 1 cut(s) 1593
MvaI CCWGG 2 cut(s) 529, 1507
MwoI GCNNNNNNNGC 2 cut(s) 316, 1559
NciI CCSGG 2 cut(s) 465, 1196
NcoI CCATGG 1 cut(s) 1629
NdeI CATATG 1 cut(s) 1033
NdeII GATC 6 cut(s) 655, 1101, 1351, 1388, 1399, 1633
NlaIV GGNNCC 3 cut(s) 418, 1324, 1718
NmuCI GTSAC 1 cut(s) 1654
NspI RCATGY 1 cut(s) 1811
OliI CACNNNNGTG 1 cut(s) 910
PaeI GCATGC 1 cut(s) 1811
PceI AGGCCT 1 cut(s) 1505
PciSI GCTCTTC 2 cut(s) 18, 175
PctI GAATGC 1 cut(s) 1593
PfeI GAWTC 5 cut(s) 289, 517, 863, 968, 1547
PflMI CCANNNNNTGG 2 cut(s) 121, 426
PkrI GCNGC 1 cut(s) 321
PleI GAGTC 6 cut(s) 92, 146, 251, 615, 852, 1789
PpsI GAGTC 6 cut(s) 92, 146, 251, 615, 852, 1789
PpuMI RGGWCCY 1 cut(s) 1259
PshBI ATTAAT 1 cut(s) 975
Psp1406I AACGTT 2 cut(s) 342, 1131
Psp5II RGGWCCY 1 cut(s) 1259
Psp6I CCWGG 2 cut(s) 527, 1505
PspGI CCWGG 2 cut(s) 527, 1505
PspN4I GGNNCC 3 cut(s) 418, 1324, 1718
PspPI GGNCC 2 cut(s) 1259, 1490
PspPPI RGGWCCY 1 cut(s) 1259
PstI CTGCAG 2 cut(s) 133, 321
RsaI GTAC 3 cut(s) 418, 812, 1027
RsaNI GTAC 3 cut(s) 417, 811, 1026
RseI CAYNNNNRTG 2 cut(s) 61, 910
SalI GTCGAC 1 cut(s) 952
SapI GCTCTTC 2 cut(s) 18, 175
SaqAI TTAA 4 cut(s) 720, 927, 960, 975
SatI GCNGC 1 cut(s) 320
Sau3AI GATC 6 cut(s) 655, 1101, 1351, 1388, 1399, 1633
Sau96I GGNCC 2 cut(s) 1259, 1490
ScaI AGTACT 1 cut(s) 812
SchI GAGTC 6 cut(s) 92, 147, 251, 615, 853, 1790
ScrFI CCNGG 4 cut(s) 465, 529, 1196, 1507
SduI GDGCHC 2 cut(s) 399, 1194
SfaNI GCATC 3 cut(s) 199, 1571, 1653
SfcI CTRYAG 2 cut(s) 129, 317
SgrDI CGTCGACG 1 cut(s) 952
SinI GGWCC 1 cut(s) 1259
SmiMI CAYNNNNRTG 2 cut(s) 61, 910
SmlI CTYRAG 2 cut(s) 43, 398
SmoI CTYRAG 2 cut(s) 43, 398
SphI GCATGC 1 cut(s) 1811
SseBI AGGCCT 1 cut(s) 1505
SsiI CCGC 2 cut(s) 135, 684
SspMI CTAG 5 cut(s) 188, 549, 803, 1355, 1359
StuI AGGCCT 1 cut(s) 1505
StyD4I CCNGG 4 cut(s) 463, 527, 1194, 1505
StyI CCWWGG 2 cut(s) 148, 1629
TaaI ACNGT 4 cut(s) 239, 941, 958, 1056
TaiI ACGT 4 cut(s) 345, 1134, 1249, 1656
TaqI TCGA 6 cut(s) 162, 438, 672, 953, 1636, 1661
TatI WGTACW 2 cut(s) 810, 1025
TfiI GAWTC 5 cut(s) 289, 517, 863, 968, 1547
Tru1I TTAA 4 cut(s) 720, 927, 960, 975
Tru9I TTAA 4 cut(s) 720, 927, 960, 975
TscAI CASTG 3 cut(s) 1560, 1582, 1738
TseFI GTSAC 1 cut(s) 1654
TseI GCWGC 1 cut(s) 319
Tsp45I GTSAC 1 cut(s) 1654
TspGWI ACGGA 2 cut(s) 663, 706
TspRI CASTG 3 cut(s) 1560, 1582, 1738
Van91I CCANNNNNTGG 2 cut(s) 121, 426
VpaK11BI GGWCC 1 cut(s) 1259
VspI ATTAAT 1 cut(s) 975
XapI RAATTY 1 cut(s) 1510
XceI RCATGY 1 cut(s) 1811
XmiI GTMKAC 2 cut(s) 953, 1497
XspI CTAG 5 cut(s) 188, 549, 803, 1355, 1359
ZrmI AGTACT 1 cut(s) 812
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.