RchiOBHm_Chr6g0298491

Domain of unknown function (DUF3403)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0000509
Physical Location & Seq
Reverse (-)
59891561 .. 59895307
3747 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ26796

Sequence Viewer

Length: 2064 bp
ATGTATAGTTCTTTCAATTCCAATAACAGTCTTTATCTCAGACCCTCAACATGTCCGTTAACAGCTATATTTAATTATTTGGATCATACAGGTACTATGCTATGGCAAAGTTTTGATATTCCTACTGATACTTATCTTCCTGGGATGAAACTTGGTTGGTCTCAGCTTAACAGTAACCAGCCAATCTTTCGCGCTTTTGTTTCTTGGGTCAACCCCCAAAATCCTGCTCTTGGCAACTTTACTTTAACCATGAACAGGATCAACTTTACAAAGCTTCAGGTTTGGAGAGGAAATATTCAAATGAATGTTGGGTCTTGGGATGGACATAATGTGCGGTTTATCTTTAATAACTCAACAAGTGGAAATGACTACAATTTTAGTTACCACTCCAATGCAGATGAAGTCTACTTTACTTTTAGTGGGAATAAGAATTATGACCTCATGTGGTTTGTGATGGCTTCCACGGGAAAGCTAGATCAGTATTATATGGTGGATGGGAAGATTTCTTCTGTGAGTAATGCTGTGTGTGATCCAACTGGGAGCTGCTTGAATTCCCTACCGTCTATGTGTAAGAATGGTGATAGTTTTTCACAGGTGAAGGGTTCACTGCCTTCTACTTTTAATAGTGGTTCTATAAATATGGGGACTGCAGATTGTGAATCTTGGTGCCGGAGCAATTGTTCTTGTACATCATTTGCTTCACCTCAGAATGATCAAGTATGCCAACTTTATTACGGGAGGACACATGATTTATTGAAGATCATAGAGAAGGGGACAGGAATTATATACATCCGCGGTGGTGCTCCAAGTGATGTTAAGAACTGGAAACTCTGGTTGGCTACCGTCCTTCCTTTGGCGTCCCTCTTGGTTCTTATTCCAACCTCCTTATGCTGCTATCTGCGTTGGAGAAGAAGACGTAAAGAGGATCCAGTAACCAGACGGGAAGGCATTATCAATTTGGATCTGGTGAGTTTATTCCAAATGGGAACTAATGAGTCACAACTTCGTCATGATGAAGTCAGAGGTACAAATAACCTGGAATTAGGCAGACAGAAGGATCAAGAACTGCCCTTGTTTAGCTTTGCTACCATACAGACTGCAACACATAACTTTGCGGAGGCTAATAAACTTGGGGAAGGAGGATTTGGGCCTGGGAAGTTACCAGTAGAAGGACCTGTAATTGCAGTGAAAAGACTGTCCAAAATTTCCCGTCAAGGGTTGGGGGAGTTCAAAAATGAAGTCTCAGTAATTTGTAAGCTTCAACACAGGAACTTGGTTAGGCTTTTTGGATGCTGCATTGAAGCAGAAGAAAGTATACTTGTTTATGAGTATATGCCCAACAAAAGCCTGGATTTTTTCATTTTTGACTCAACCAAACGGGTCCTTTTGGATTGGAGAAAGCGCATCAACATTATTGAAGGCATTGCTCAAGGACTTCAATATCTTCACAAATACTCAAGATTAAGGATCATTCACCGTGATTTAAAGCCCAGCAATATCTTGTTGGACAGTGACATGAACCCAAAAATTTCTGATTTTGGCATGGCAAGAATTTTTGGGGATAATGACTCTAAGGGGAAAACAAACAGGGTTGTTGGCACATTTGGTTACATGTCTCCTGAGTATGCCATGGACGGGCTCTTTTCTGAAAAGTCAGATGTGTTCAGCTTTGGGGTGATCTTATTAGAGATCATAAGTGCCAAGAAGAATATTGCCTTCTTTGAGGCAGATCACTCTCTGAACTTACTTGGCAAAGCTTGGAATCTGTGGAAAGAAGGCAGTAGCATGGAGTTGATGGATCCAACACTCGGTGGTTCTTGTTCAAGCAGTGAAGCTATCAGATGCACTCAAATTGGTCTTCTGTGTGTGCAAGAAAGAGCTACTGATCGACCAACAATGTCAGATGTTATTTCTATGCTAAGCAATCAGTCATGTTCTCTGCCACTTCCCAAACAGCCTGCATTTTTGAGTCAGTTAAGTTCAACTGATGCAGATTCATCTTCAAGTAGGCACAGACATTACTCTCAAAATGACATGACTATTTCAGAAGAACATGGCAGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin DUF3403 PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

687

Amino Acids

77.24

Weight (kDa)

8.01

Isoelectric Point (pI)

49.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 28 - 60 1.5e-07 D-mannose binding lectin
Pkinase PF00069 372 - 572 6.3e-41 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 377 - 639 3.4e-41 Protein tyrosine and serine/threonine kinase
DUF3403 PF11883 646 - 687 7e-07 Domain of unknown function (DUF3403)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000509)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g29542 FvH4_2g29543 FvH4_2g29543 FvH4_2g29543 FvH4_2g29543 FvH4_2g29544 FvH4_2g29545 FvH4_2g29545 FvH4_2g29545 FvH4_2g29545 FvH4_2g29545 FvH4_2g29560
malus_domestica MD15G1121300.v1.1
prunus_persica Prupe.1G473900_v2.0.a1 Prupe.1G474000_v2.0.a1 Prupe.1G474000_v2.0.a1 Prupe.1G474000_v2.0.a1 Prupe.1G474000_v2.0.a1 Prupe.1G474100_v2.0.a1 Prupe.1G474300_v2.0.a1 Prupe.1G474500_v2.0.a1
rosa_chinensis RchiOBHm_Chr6g0298411 RchiOBHm_Chr6g0298421 RchiOBHm_Chr6g0298431 RchiOBHm_Chr6g0298441 RchiOBHm_Chr6g0298451 RchiOBHm_Chr6g0298461 RchiOBHm_Chr6g0298471 RchiOBHm_Chr6g0298481 RchiOBHm_Chr6g0298491 RchiOBHm_Chr6g0298501 RchiOBHm_Chr6g0298521
rosa_laevigata RLG00000011506 RLG00000011508 RLG00000011509 RLG00000011511 RLG00000011513 RLG00000011514 RLG00000011515
rosa_multiflora Rmu_co8314937.1_g000001 Rmu_co8319199.1_g000001 Rmu_sc0004500.1_g000002 Rmu_sc0006543.1_g000001 Rmu_ssc0000289.1_g000039 Rmu_ssc0000289.1_g000040 Rmu_ssc0000289.1_g000047 Rmu_ssc0000289.1_g000048 Rmu_ssc0000289.1_g000049 Rmu_ssc0000289.1_g000051
rosa_roxburghii Rroxscaffold_7G00169570 Rroxscaffold_7G00169580 Rroxscaffold_7G00169600 Rroxscaffold_7G00169610 Rroxscaffold_7G00169620 Rroxscaffold_7G00169630 Rroxscaffold_7G00169650 Rroxscaffold_7G00169660 Rroxscaffold_7G00169670
rosa_rugosa Rorug06G0280700 Rorug06G0280800 Rorug06G0280900
rosa_samantha Rh6AG391700 Rh6AG391800 Rh6AG392000 Rh6AG392100 Rh6AG392200 Rh6BG399300 Rh6BG399400 Rh6BG399500 Rh6BG399700 Rh6BG400000 Rh6CG405400 Rh6CG405500 Rh6CG405600 Rh6CG405700 Rh6CG405800 Rh6DG391800 Rh6DG391900 Rh6DG392000 Rh6DG392100 Rh6DG392300
rosa_wichuraiana Rw6G034230 Rw6G034240 Rw6G034250 Rw6G034260 Rw6G034270 Rw6G034280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 2049
AccB1I GGYRCC 1 cut(s) 666
AccI GTMKAC 2 cut(s) 405, 1315
AccII CGCG 2 cut(s) 192, 795
AciI CCGC 4 cut(s) 334, 793, 795, 1115
AcsI RAATTY 4 cut(s) 550, 1203, 1527, 1551
AcuI CTGAAG 1 cut(s) 260
AcyI GRCGYC 1 cut(s) 857
AdeI CACNNNGTG 1 cut(s) 1811
AfaI GTAC 3 cut(s) 94, 688, 1027
AfiI CCNNNNNNNGG 7 cut(s) 230, 255, 853, 1169, 1215, 1635, 1808
AflIII ACRYGT 2 cut(s) 50, 1611
AjnI CCWGG 4 cut(s) 139, 1035, 1150, 1347
AjuI GAANNNNNNNTTGG 4 cut(s) 818, 850, 1128, 1160
AloI GAACNNNNNNTCC 2 cut(s) 664, 696
Alw21I GWGCWC 1 cut(s) 805
Alw26I GTCTC 3 cut(s) 165, 1246, 1620
AoxI GGCC 1 cut(s) 1148
ApeKI GCWGC 3 cut(s) 543, 891, 1293
ApoI RAATTY 4 cut(s) 550, 1203, 1527, 1551
ArsI GACNNNNNNTTYG 2 cut(s) 1224, 1256
AspLEI GCGC 2 cut(s) 194, 1404
AspS9I GGNCC 3 cut(s) 1148, 1172, 1381
AsuHPI GGTGA 6 cut(s) 590, 607, 693, 979, 1466, 1687
AvaII GGWCC 2 cut(s) 1172, 1381
BamHI GGATCC 2 cut(s) 925, 1798
BanI GGYRCC 1 cut(s) 666
BanII GRGCYC 1 cut(s) 1641
BarI GAAGNNNNNNTAC 2 cut(s) 1299, 1331
BbsI GAAGAC 2 cut(s) 919, 1850
Bbv12I GWGCWC 1 cut(s) 805
BbvI GCAGC 3 cut(s) 530, 878, 1280
BccI CCATC 4 cut(s) 314, 448, 488, 1789
BciT130I CCWGG 4 cut(s) 141, 1037, 1152, 1349
BclI TGATCA 1 cut(s) 712
BcoDI GTCTC 3 cut(s) 165, 1246, 1620
BfaI CTAG 1 cut(s) 473
BfmI CTRYAG 1 cut(s) 648
BfuAI ACCTGC 1 cut(s) 2049
BisI GCNGC 3 cut(s) 544, 892, 1294
BlpI GCTNAGC 1 cut(s) 1919
BlsI GCNGC 3 cut(s) 545, 893, 1295
Bme1390I CCNGG 4 cut(s) 141, 1037, 1152, 1349
Bme18I GGWCC 2 cut(s) 1172, 1381
BmgT120I GGNCC 3 cut(s) 1148, 1172, 1381
BmiI GGNNCC 4 cut(s) 668, 927, 1382, 1800
BmrFI CCNGG 4 cut(s) 141, 1037, 1152, 1349
BmrI ACTGGG 1 cut(s) 546
BmsI GCATC 4 cut(s) 1280, 1413, 1832, 1978
BmuI ACTGGG 1 cut(s) 546
BpiI GAAGAC 2 cut(s) 919, 1850
Bpu1102I GCTNAGC 1 cut(s) 1919
BpuEI CTTGAG 2 cut(s) 1413, 1441
BsaBI GATNNNNATC 1 cut(s) 132
BsaHI GRCGYC 1 cut(s) 857
BsaI GGTCTC 1 cut(s) 165
BsaJI CCNNGG 5 cut(s) 140, 462, 793, 1151, 1629
BsaXI ACNNNNNCTCC 2 cut(s) 664, 694
Bsc4I CCNNNNNNNGG 7 cut(s) 230, 255, 853, 1169, 1215, 1635, 1808
Bse1I ACTGG 4 cut(s) 541, 827, 929, 1163
Bse3DI GCAATG 1 cut(s) 1422
Bse8I GATNNNNATC 1 cut(s) 132
BseBI CCWGG 4 cut(s) 141, 1037, 1152, 1349
BseDI CCNNGG 5 cut(s) 140, 462, 793, 1151, 1629
BseGI GGATG 5 cut(s) 150, 325, 499, 789, 1295
BseJI GATNNNNATC 1 cut(s) 132
BseLI CCNNNNNNNGG 7 cut(s) 230, 255, 853, 1169, 1215, 1635, 1808
BseMI GCAATG 1 cut(s) 1422
BseMII CTCAG 5 cut(s) 52, 176, 719, 1257, 1611
BseNI ACTGG 4 cut(s) 541, 827, 929, 1163
BseXI GCAGC 3 cut(s) 530, 878, 1280
BseYI CCCAGC 1 cut(s) 1490
Bsh1236I CGCG 2 cut(s) 192, 795
BshFI GGCC 1 cut(s) 1150
BshNI GGYRCC 1 cut(s) 666
BsiHKAI GWGCWC 1 cut(s) 805
BsiSI CCGG 1 cut(s) 670
BslFI GGGAC 3 cut(s) 658, 787, 844
BslI CCNNNNNNNGG 7 cut(s) 230, 255, 853, 1169, 1215, 1635, 1808
BsmAI GTCTC 3 cut(s) 165, 1246, 1620
BsmFI GGGAC 3 cut(s) 658, 787, 844
BsnI GGCC 1 cut(s) 1150
Bso31I GGTCTC 1 cut(s) 165
Bsp1286I GDGCHC 2 cut(s) 805, 1641
Bsp1407I TGTACA 1 cut(s) 686
Bsp1720I GCTNAGC 1 cut(s) 1919
Bsp19I CCATGG 1 cut(s) 1629
BspACI CCGC 4 cut(s) 334, 793, 795, 1115
BspANI GGCC 1 cut(s) 1150
BspCNI CTCAG 5 cut(s) 51, 175, 718, 1256, 1612
BspFNI CGCG 2 cut(s) 192, 795
BspHI TCATGA 1 cut(s) 1009
BspLI GGNNCC 4 cut(s) 668, 927, 1382, 1800
BspMAI CTGCAG 1 cut(s) 652
BspMI ACCTGC 1 cut(s) 2049
BspT107I GGYRCC 1 cut(s) 666
BspTNI GGTCTC 1 cut(s) 165
BsrDI GCAATG 1 cut(s) 1422
BsrGI TGTACA 1 cut(s) 686
BsrI ACTGG 4 cut(s) 541, 827, 929, 1163
BssECI CCNNGG 5 cut(s) 140, 462, 793, 1151, 1629
BssNAI GTATAC 1 cut(s) 1316
BssNI GRCGYC 1 cut(s) 857
BssT1I CCWWGG 1 cut(s) 1629
Bst1107I GTATAC 1 cut(s) 1316
Bst2UI CCWGG 4 cut(s) 141, 1037, 1152, 1349
Bst4CI ACNGT 7 cut(s) 29, 173, 561, 844, 1197, 1478, 1511
BstACI GRCGYC 1 cut(s) 857
BstAUI TGTACA 1 cut(s) 686
BstC8I GCNNGC 1 cut(s) 1959
BstDEI CTNAG 7 cut(s) 38, 162, 705, 1243, 1572, 1620, 1919
BstDSI CCRYGG 3 cut(s) 462, 793, 1629
BstF5I GGATG 5 cut(s) 150, 325, 499, 789, 1295
BstFNI CGCG 2 cut(s) 192, 795
BstHHI GCGC 2 cut(s) 194, 1404
BstMAI GTCTC 3 cut(s) 165, 1246, 1620
BstNI CCWGG 4 cut(s) 141, 1037, 1152, 1349
BstNSI RCATGY 2 cut(s) 54, 1615
BstSCI CCNGG 4 cut(s) 139, 1035, 1150, 1347
BstSFI CTRYAG 1 cut(s) 648
BstUI CGCG 2 cut(s) 192, 795
BstV1I GCAGC 3 cut(s) 530, 878, 1280
BstV2I GAAGAC 2 cut(s) 919, 1850
BstX2I RGATCY 3 cut(s) 925, 961, 1798
BstYI RGATCY 3 cut(s) 925, 961, 1798
BstZ17I GTATAC 1 cut(s) 1316
BsuRI GGCC 1 cut(s) 1150
BtgI CCRYGG 3 cut(s) 462, 793, 1629
BtsCI GGATG 5 cut(s) 150, 325, 499, 789, 1295
BtsI GCAGTG 3 cut(s) 605, 1191, 1834
BtsIMutI CAGTG 4 cut(s) 605, 1191, 1516, 1834
BveI ACCTGC 1 cut(s) 2049
Cac8I GCNNGC 1 cut(s) 1959
CciI TCATGA 1 cut(s) 1009
CfoI GCGC 2 cut(s) 194, 1404
Cfr13I GGNCC 3 cut(s) 1148, 1172, 1381
Cfr42I CCGCGG 1 cut(s) 796
CseI GACGC 1 cut(s) 846
Csp6I GTAC 3 cut(s) 93, 687, 1026
CviQI GTAC 3 cut(s) 93, 687, 1026
DdeI CTNAG 7 cut(s) 38, 162, 705, 1243, 1572, 1620, 1919
DraI TTTAAA 1 cut(s) 1485
DraIII CACNNNGTG 1 cut(s) 1811
Eco130I CCWWGG 1 cut(s) 1629
Eco24I GRGCYC 1 cut(s) 1641
Eco31I GGTCTC 1 cut(s) 165
Eco47I GGWCC 2 cut(s) 1172, 1381
Eco57I CTGAAG 1 cut(s) 260
EcoO109I RGGNCCY 2 cut(s) 1172, 1381
EcoRI GAATTC 1 cut(s) 550
EcoRII CCWGG 4 cut(s) 139, 1035, 1150, 1347
EcoT14I CCWWGG 1 cut(s) 1629
EcoT38I GRGCYC 1 cut(s) 1641
ErhI CCWWGG 1 cut(s) 1629
FaqI GGGAC 3 cut(s) 658, 787, 844
FbaI TGATCA 1 cut(s) 712
FblI GTMKAC 2 cut(s) 405, 1315
Fnu4HI GCNGC 3 cut(s) 544, 892, 1294
FokI GGATG 5 cut(s) 157, 332, 506, 776, 1302
FriOI GRGCYC 1 cut(s) 1641
Fsp4HI GCNGC 3 cut(s) 544, 892, 1294
FspBI CTAG 1 cut(s) 473
GlaI GCGC 2 cut(s) 193, 1403
GluI GCNGC 3 cut(s) 544, 892, 1294
GsaI CCCAGC 1 cut(s) 1494
HaeIII GGCC 1 cut(s) 1150
HapII CCGG 1 cut(s) 670
HgaI GACGC 1 cut(s) 846
HhaI GCGC 2 cut(s) 194, 1404
Hin1I GRCGYC 1 cut(s) 857
Hin6I GCGC 2 cut(s) 192, 1402
HinP1I GCGC 2 cut(s) 192, 1402
HincII GTYRAC 2 cut(s) 60, 211
HindII GTYRAC 2 cut(s) 60, 211
HindIII AAGCTT 3 cut(s) 272, 1256, 1755
HinfI GANTC 7 cut(s) 659, 995, 1367, 1568, 1762, 1969, 1994
HpaI GTTAAC 1 cut(s) 60
HpaII CCGG 1 cut(s) 670
HphI GGTGA 6 cut(s) 590, 607, 693, 979, 1466, 1687
Hpy166II GTNNAC 5 cut(s) 60, 211, 406, 605, 1316
Hpy188III TCNNGA 4 cut(s) 1010, 1061, 1458, 1619
Hpy8I GTNNAC 5 cut(s) 60, 211, 406, 605, 1316
HpyCH4III ACNGT 7 cut(s) 29, 173, 561, 844, 1197, 1478, 1511
HpyCH4IV ACGT 1 cut(s) 916
HpyCH4V TGCA 9 cut(s) 395, 650, 1100, 1184, 1296, 1845, 1870, 1961, 1991
HpyF3I CTNAG 7 cut(s) 38, 162, 705, 1243, 1572, 1620, 1919
HpySE526I ACGT 1 cut(s) 916
Hsp92I GRCGYC 1 cut(s) 857
HspAI GCGC 2 cut(s) 192, 1402
Ksp22I TGATCA 1 cut(s) 712
KspAI GTTAAC 1 cut(s) 60
KspI CCGCGG 1 cut(s) 796
LmnI GCTCC 3 cut(s) 540, 672, 808
Lsp1109I GCAGC 3 cut(s) 530, 878, 1280
LweI GCATC 4 cut(s) 1280, 1413, 1832, 1978
MaeI CTAG 1 cut(s) 473
MaeII ACGT 1 cut(s) 916
MaeIII GTNAC 7 cut(s) 173, 380, 931, 996, 1158, 1511, 1607
MfeI CAATTG 1 cut(s) 676
MflI RGATCY 3 cut(s) 925, 961, 1798
MhlI GDGCHC 2 cut(s) 805, 1641
MlyI GAGTC 4 cut(s) 1004, 1361, 1562, 1978
MmeI TCCRAC 5 cut(s) 557, 884, 902, 1485, 1826
MslI CAYNNNNRTG 1 cut(s) 390
MspA1I CMGCKG 1 cut(s) 795
MspI CCGG 1 cut(s) 670
MspR9I CCNGG 4 cut(s) 141, 1037, 1152, 1349
MunI CAATTG 1 cut(s) 676
MvaI CCWGG 4 cut(s) 141, 1037, 1152, 1349
MvnI CGCG 2 cut(s) 192, 795
NcoI CCATGG 1 cut(s) 1629
NlaIV GGNNCC 4 cut(s) 668, 927, 1382, 1800
NmuCI GTSAC 2 cut(s) 996, 1511
NspI RCATGY 2 cut(s) 54, 1615
PagI TCATGA 1 cut(s) 1009
PciI ACATGT 2 cut(s) 50, 1611
PfeI GAWTC 3 cut(s) 659, 1762, 1994
PkrI GCNGC 3 cut(s) 545, 893, 1295
PleI GAGTC 4 cut(s) 1003, 1361, 1562, 1977
PpsI GAGTC 4 cut(s) 1003, 1361, 1562, 1977
PpuMI RGGWCCY 2 cut(s) 1172, 1381
PscI ACATGT 2 cut(s) 50, 1611
Psp5II RGGWCCY 2 cut(s) 1172, 1381
Psp6I CCWGG 4 cut(s) 139, 1035, 1150, 1347
PspFI CCCAGC 1 cut(s) 1490
PspGI CCWGG 4 cut(s) 139, 1035, 1150, 1347
PspN4I GGNNCC 4 cut(s) 668, 927, 1382, 1800
PspPI GGNCC 3 cut(s) 1148, 1172, 1381
PspPPI RGGWCCY 2 cut(s) 1172, 1381
PstI CTGCAG 1 cut(s) 652
PsuI RGATCY 3 cut(s) 925, 961, 1798
RsaI GTAC 3 cut(s) 94, 688, 1027
RsaNI GTAC 3 cut(s) 93, 687, 1026
RseI CAYNNNNRTG 1 cut(s) 390
SacII CCGCGG 1 cut(s) 796
SatI GCNGC 3 cut(s) 544, 892, 1294
Sau96I GGNCC 3 cut(s) 1148, 1172, 1381
SchI GAGTC 4 cut(s) 1004, 1361, 1562, 1978
ScrFI CCNGG 4 cut(s) 141, 1037, 1152, 1349
SduI GDGCHC 2 cut(s) 805, 1641
SfaNI GCATC 4 cut(s) 1280, 1413, 1832, 1978
SfcI CTRYAG 1 cut(s) 648
Sfr303I CCGCGG 1 cut(s) 796
SgrBI CCGCGG 1 cut(s) 796
SinI GGWCC 2 cut(s) 1172, 1381
SmiMI CAYNNNNRTG 1 cut(s) 390
SmlI CTYRAG 2 cut(s) 1428, 1456
SmoI CTYRAG 2 cut(s) 1428, 1456
SsiI CCGC 4 cut(s) 334, 793, 795, 1115
SspI AATATT 2 cut(s) 295, 1711
SspMI CTAG 1 cut(s) 473
StyD4I CCNGG 4 cut(s) 139, 1035, 1150, 1347
StyI CCWWGG 1 cut(s) 1629
TaaI ACNGT 7 cut(s) 29, 173, 561, 844, 1197, 1478, 1511
TaiI ACGT 1 cut(s) 919
TaqI TCGA 1 cut(s) 1888
TatI WGTACW 1 cut(s) 686
TfiI GAWTC 3 cut(s) 659, 1762, 1994
TscAI CASTG 4 cut(s) 612, 1191, 1516, 1834
TseFI GTSAC 2 cut(s) 996, 1511
TseI GCWGC 3 cut(s) 543, 891, 1293
Tsp45I GTSAC 2 cut(s) 996, 1511
TspDTI ATGAA 9 cut(s) 161, 266, 317, 414, 1029, 1251, 1348, 1532, 1986
TspGWI ACGGA 1 cut(s) 45
TspRI CASTG 4 cut(s) 612, 1191, 1516, 1834
VpaK11BI GGWCC 2 cut(s) 1172, 1381
XapI RAATTY 4 cut(s) 550, 1203, 1527, 1551
XceI RCATGY 2 cut(s) 54, 1615
XcmI CCANNNNNNNNNTGG 1 cut(s) 1345
XmiI GTMKAC 2 cut(s) 405, 1315
XspI CTAG 1 cut(s) 473
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.