Rorug06G0280700

Domain of unknown function (DUF3403)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0000509
Physical Location & Seq
Reverse (-)
42809340 .. 42813466
4127 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0280700.1

Sequence Viewer

Length: 1314 bp
ATGAAAAGTGAAGGTTTGAAGTGGGTTTTAGGTTTGATATACATATTTGCTGTTGCATCTATTTGGATAGCTGCTAGTTTTGTTGTACAGTCGGTTGTGGATGCCGGTGTGTCCCCTTTTCTTATTACCTACATATGCAATTCATTGTTTGTGATCTACATTCCCTTGGTTGAAGCCGGGCGCTATTTGGAGGATTCGTTCGGAGGGTTTTGGTTTTGGAAAAGTAAGGAGAGTAGTCCTTTGCGAGAGTTGGTGGAGTCGGAGCAATCCACTCTTCTTGGAGACGGTGATGCTGTTGCGAAAACTGATGATGCATCTGTGCATGTAGAAGAGGGAGAAATTGGCGGACATGGAAAAGTTATTGATGGAGAAGTGAAAGTTGTGGCGTATGAGCCTATTAGGATATCAGCGAATCTGTCTGAAATCGATGAAGTTGCTGATAAGCAAGTGGATGAAAAAGGGCGTTGGACACGTACTCGAGTGGCAAAAGTTAGCCTATTGATTTCCCCATTTTGGTTTTTTGCACAGCTCACTTTCAATTTGTCATTGAAGTATACTACAGTCACATCAAATACAATCTTAAGCAGTGCATCCAGCCTGTTCACCTTTTTGGTCTCTCTAGCATTCTTAGGTGAGAACTTCACTTTGGTGAAGCTTTTCAGTGTTCTTCTTTGCATGGGAGGAACGATAATTGTCAGCCTCGGTGACTCACGAACTACTCTAAGTGCAATTGCTTCAAACCCTCTACTGGGAGACATACTTGCTCTTGTCTCAGCAGCTTTGTATTCTGTGTATATTACCCTTATTCGCAAGAAGTTACCTGATGAGGATGATGAGAAAAGTGGTCGTGCTAGTATGGCTCAGTTTCTGGGATTTTTAGGGCTTTCTAACCTTTTCATATTTCTTCCAGTTGCCCTTGTACTGCATTTCTCAAAGTTGGAACCCTTTTATATGCTGACCTGGAAGCAGCTTGGTCTCATTGTTGGTAAAGGTTTGCTGGATAACGTTCTGAGCGATTACTTATGGGCCAAGGCTGTTCTTCTAACAACAACCACAGTAGCAACAGCTGGTCTATCAATACAAGTTCCGTTGGCGGCAATTGTAGACTCCGTGACTGGCCATGCTCCTCATTTTGCTGATTACTTTGGAGCTGTGGCCGTTATGATTGGATTTGTTGGCATTAATATTCCTTCTGATGCTTTTAAGAGGTCGAAAGGAGCTACACTAGAATTAGAGAATGGAAATAATAGAAATAGTAGTTCAATTAGTGAACCTGGTAGTTCATCAGGTCCAGATTCAACTGCCCATTCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin DUF3403 PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

437

Amino Acids

47.17

Weight (kDa)

5.1

Isoelectric Point (pI)

30.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PUNUT PF16913 147 - 271 5.3e-07 Purine nucleobase transmembrane transport
EamA PF00892 164 - 233 4.9e-09 EamA-like transporter family
TPT PF03151 169 - 316 3.5e-06 Triose-phosphate Transporter family
SLC35F PF06027 183 - 268 5.6e-07 Solute carrier family 35
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000509)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g29542 FvH4_2g29543 FvH4_2g29543 FvH4_2g29543 FvH4_2g29543 FvH4_2g29544 FvH4_2g29545 FvH4_2g29545 FvH4_2g29545 FvH4_2g29545 FvH4_2g29545 FvH4_2g29560
malus_domestica MD15G1121300.v1.1
prunus_persica Prupe.1G473900_v2.0.a1 Prupe.1G474000_v2.0.a1 Prupe.1G474000_v2.0.a1 Prupe.1G474000_v2.0.a1 Prupe.1G474000_v2.0.a1 Prupe.1G474100_v2.0.a1 Prupe.1G474300_v2.0.a1 Prupe.1G474500_v2.0.a1
rosa_chinensis RchiOBHm_Chr6g0298411 RchiOBHm_Chr6g0298421 RchiOBHm_Chr6g0298431 RchiOBHm_Chr6g0298441 RchiOBHm_Chr6g0298451 RchiOBHm_Chr6g0298461 RchiOBHm_Chr6g0298471 RchiOBHm_Chr6g0298481 RchiOBHm_Chr6g0298491 RchiOBHm_Chr6g0298501 RchiOBHm_Chr6g0298521
rosa_laevigata RLG00000011506 RLG00000011508 RLG00000011509 RLG00000011511 RLG00000011513 RLG00000011514 RLG00000011515
rosa_multiflora Rmu_co8314937.1_g000001 Rmu_co8319199.1_g000001 Rmu_sc0004500.1_g000002 Rmu_sc0006543.1_g000001 Rmu_ssc0000289.1_g000039 Rmu_ssc0000289.1_g000040 Rmu_ssc0000289.1_g000047 Rmu_ssc0000289.1_g000048 Rmu_ssc0000289.1_g000049 Rmu_ssc0000289.1_g000051
rosa_roxburghii Rroxscaffold_7G00169570 Rroxscaffold_7G00169580 Rroxscaffold_7G00169600 Rroxscaffold_7G00169610 Rroxscaffold_7G00169620 Rroxscaffold_7G00169630 Rroxscaffold_7G00169650 Rroxscaffold_7G00169660 Rroxscaffold_7G00169670
rosa_rugosa Rorug06G0280700 Rorug06G0280800 Rorug06G0280900
rosa_samantha Rh6AG391700 Rh6AG391800 Rh6AG392000 Rh6AG392100 Rh6AG392200 Rh6BG399300 Rh6BG399400 Rh6BG399500 Rh6BG399700 Rh6BG400000 Rh6CG405400 Rh6CG405500 Rh6CG405600 Rh6CG405700 Rh6CG405800 Rh6DG391800 Rh6DG391900 Rh6DG392000 Rh6DG392100 Rh6DG392300
rosa_wichuraiana Rw6G034230 Rw6G034240 Rw6G034250 Rw6G034260 Rw6G034270 Rw6G034280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 554, 1104
AciI CCGC 2 cut(s) 345, 1094
AclI AACGTT 1 cut(s) 1005
AcoI YGGCCR 2 cut(s) 1117, 1155
AfaI GTAC 3 cut(s) 87, 475, 921
AfiI CCNNNNNNNGG 3 cut(s) 513, 748, 749
AflII CTTAAG 1 cut(s) 580
AflIII ACRYGT 1 cut(s) 470
AgsI TTSAA 7 cut(s) 19, 173, 538, 550, 738, 1263, 1299
AjnI CCWGG 2 cut(s) 959, 1273
AjuI GAANNNNNNNTTGG 2 cut(s) 629, 661
AleI CACNNNNGTG 1 cut(s) 647
AloI GAACNNNNNNTCC 2 cut(s) 182, 214
AluBI AGCT 8 cut(s) 71, 529, 655, 779, 970, 1067, 1151, 1220
AluI AGCT 8 cut(s) 71, 529, 655, 779, 970, 1067, 1151, 1220
Alw26I GTCTC 5 cut(s) 276, 619, 747, 775, 980
AlwNI CAGNNNCTG 1 cut(s) 868
Ama87I CYCGRG 1 cut(s) 477
AoxI GGCC 3 cut(s) 1026, 1117, 1155
ApeKI GCWGC 3 cut(s) 71, 776, 967
AseI ATTAAT 1 cut(s) 1182
Asp700I GAANNNNTTC 1 cut(s) 656
AspLEI GCGC 1 cut(s) 183
AspS9I GGNCC 2 cut(s) 1026, 1289
AsuC2I CCSGG 1 cut(s) 178
AsuHPI GGTGA 5 cut(s) 299, 595, 644, 661, 716
AvaI CYCGRG 1 cut(s) 477
AvaII GGWCC 1 cut(s) 1289
BalI TGGCCA 1 cut(s) 1119
BbvI GCAGC 3 cut(s) 58, 788, 979
BccI CCATC 1 cut(s) 359
BceAI ACGGC 1 cut(s) 1142
BcgI CGANNNNNNTGC 2 cut(s) 416, 450
BciT130I CCWGG 2 cut(s) 961, 1275
BcnI CCSGG 1 cut(s) 178
BcoDI GTCTC 5 cut(s) 276, 619, 747, 775, 980
BfaI CTAG 4 cut(s) 75, 620, 852, 1226
BfmI CTRYAG 1 cut(s) 558
BfoI RGCGCY 1 cut(s) 184
BfrI CTTAAG 1 cut(s) 580
BisI GCNGC 4 cut(s) 72, 777, 968, 1095
BlsI GCNGC 4 cut(s) 73, 778, 969, 1096
Bme1390I CCNGG 3 cut(s) 178, 961, 1275
Bme18I GGWCC 1 cut(s) 1289
BmeT110I CYCGRG 1 cut(s) 477
BmgT120I GGNCC 2 cut(s) 1026, 1289
BmiI GGNNCC 1 cut(s) 942
BmrFI CCNGG 3 cut(s) 178, 961, 1275
BmrI ACTGGG 1 cut(s) 758
BmsI GCATC 7 cut(s) 65, 91, 280, 301, 323, 599, 1186
BmuI ACTGGG 1 cut(s) 758
BpuMI CCSGG 1 cut(s) 178
Bsa29I ATCGAT 1 cut(s) 426
BsaAI YACGTR 1 cut(s) 473
BsaI GGTCTC 2 cut(s) 619, 980
BsaJI CCNNGG 3 cut(s) 165, 700, 1029
BsaXI ACNNNNNCTCC 2 cut(s) 182, 212
Bsc4I CCNNNNNNNGG 3 cut(s) 513, 748, 749
Bse118I RCCGGY 1 cut(s) 104
Bse1I ACTGG 3 cut(s) 753, 908, 1120
BseBI CCWGG 2 cut(s) 961, 1275
BseCI ATCGAT 1 cut(s) 426
BseDI CCNNGG 3 cut(s) 165, 700, 1029
BseGI GGATG 4 cut(s) 106, 457, 590, 835
BseLI CCNNNNNNNGG 3 cut(s) 513, 748, 749
BseMII CTCAG 3 cut(s) 786, 875, 1001
BseNI ACTGG 3 cut(s) 753, 908, 1120
BseRI GAGGAG 1 cut(s) 1116
BseXI GCAGC 3 cut(s) 58, 788, 979
BshFI GGCC 3 cut(s) 1028, 1119, 1157
BshVI ATCGAT 1 cut(s) 426
BsiHKCI CYCGRG 1 cut(s) 477
BsiSI CCGG 2 cut(s) 105, 177
BslFI GGGAC 1 cut(s) 97
BslI CCNNNNNNNGG 3 cut(s) 513, 748, 749
BsmAI GTCTC 5 cut(s) 276, 619, 747, 775, 980
BsmBI CGTCTC 1 cut(s) 276
BsmFI GGGAC 1 cut(s) 97
BsmI GAATGC 1 cut(s) 623
BsnI GGCC 3 cut(s) 1028, 1119, 1157
Bso31I GGTCTC 2 cut(s) 619, 980
BsoBI CYCGRG 1 cut(s) 477
Bsp1407I TGTACA 1 cut(s) 85
Bsp143I GATC 1 cut(s) 153
BspACI CCGC 2 cut(s) 345, 1094
BspANI GGCC 3 cut(s) 1028, 1119, 1157
BspCNI CTCAG 3 cut(s) 785, 874, 1002
BspDI ATCGAT 1 cut(s) 426
BspLI GGNNCC 1 cut(s) 942
BspTI CTTAAG 1 cut(s) 580
BspTNI GGTCTC 2 cut(s) 619, 980
BsrFI RCCGGY 1 cut(s) 104
BsrGI TGTACA 1 cut(s) 85
BsrI ACTGG 3 cut(s) 753, 908, 1120
BssAI RCCGGY 1 cut(s) 104
BssECI CCNNGG 3 cut(s) 165, 700, 1029
BssMI GATC 1 cut(s) 153
BssNAI GTATAC 1 cut(s) 555
BssT1I CCWWGG 2 cut(s) 165, 1029
Bst1107I GTATAC 1 cut(s) 555
Bst2UI CCWGG 2 cut(s) 961, 1275
Bst4CI ACNGT 4 cut(s) 90, 287, 562, 1057
Bst6I CTCTTC 2 cut(s) 279, 324
BstAFI CTTAAG 1 cut(s) 580
BstAUI TGTACA 1 cut(s) 85
BstBAI YACGTR 1 cut(s) 473
BstDEI CTNAG 5 cut(s) 628, 722, 772, 861, 1010
BstF5I GGATG 4 cut(s) 106, 457, 590, 835
BstH2I RGCGCY 1 cut(s) 184
BstHHI GCGC 1 cut(s) 183
BstKTI GATC 1 cut(s) 156
BstMAI GTCTC 5 cut(s) 276, 619, 747, 775, 980
BstMBI GATC 1 cut(s) 153
BstMWI GCNNNNNNNGC 1 cut(s) 857
BstNI CCWGG 2 cut(s) 961, 1275
BstNSI RCATGY 1 cut(s) 326
BstSCI CCNGG 3 cut(s) 176, 959, 1273
BstSFI CTRYAG 1 cut(s) 558
BstV1I GCAGC 3 cut(s) 58, 788, 979
BstZ17I GTATAC 1 cut(s) 555
Bsu15I ATCGAT 1 cut(s) 426
BsuRI GGCC 3 cut(s) 1028, 1119, 1157
BsuTUI ATCGAT 1 cut(s) 426
BtsCI GGATG 4 cut(s) 106, 457, 590, 835
BtsI GCAGTG 1 cut(s) 592
BtsIMutI CAGTG 2 cut(s) 592, 667
CaiI CAGNNNCTG 1 cut(s) 868
CfoI GCGC 1 cut(s) 183
Cfr10I RCCGGY 1 cut(s) 104
Cfr13I GGNCC 2 cut(s) 1026, 1289
ClaI ATCGAT 1 cut(s) 426
CsiI ACCWGGT 1 cut(s) 1273
Csp6I GTAC 3 cut(s) 86, 474, 920
CspCI CAANNNNNGTGG 2 cut(s) 259, 294
CviAII CATG 4 cut(s) 323, 350, 676, 1121
CviQI GTAC 3 cut(s) 86, 474, 920
DdeI CTNAG 5 cut(s) 628, 722, 772, 861, 1010
DpnI GATC 1 cut(s) 155
DpnII GATC 1 cut(s) 153
EaeI YGGCCR 2 cut(s) 1117, 1155
Eam1104I CTCTTC 2 cut(s) 279, 324
EarI CTCTTC 2 cut(s) 279, 324
EciI GGCGGA 1 cut(s) 360
Eco130I CCWWGG 2 cut(s) 165, 1029
Eco31I GGTCTC 2 cut(s) 619, 980
Eco32I GATATC 1 cut(s) 405
Eco47I GGWCC 1 cut(s) 1289
Eco88I CYCGRG 1 cut(s) 477
EcoRII CCWGG 2 cut(s) 959, 1273
EcoRV GATATC 1 cut(s) 405
EcoT14I CCWWGG 2 cut(s) 165, 1029
EcoT22I ATGCAT 1 cut(s) 316
ErhI CCWWGG 2 cut(s) 165, 1029
Esp3I CGTCTC 1 cut(s) 276
FaeI CATG 4 cut(s) 326, 353, 679, 1124
FaqI GGGAC 1 cut(s) 97
FatI CATG 4 cut(s) 322, 349, 675, 1120
FauNDI CATATG 1 cut(s) 134
FblI GTMKAC 2 cut(s) 554, 1104
Fnu4HI GCNGC 4 cut(s) 72, 777, 968, 1095
FokI GGATG 4 cut(s) 113, 464, 577, 842
Fsp4HI GCNGC 4 cut(s) 72, 777, 968, 1095
FspBI CTAG 4 cut(s) 75, 620, 852, 1226
GlaI GCGC 1 cut(s) 182
GluI GCNGC 4 cut(s) 72, 777, 968, 1095
HaeII RGCGCY 1 cut(s) 184
HaeIII GGCC 3 cut(s) 1028, 1119, 1157
HapII CCGG 2 cut(s) 105, 177
HhaI GCGC 1 cut(s) 183
Hin1II CATG 4 cut(s) 326, 353, 679, 1124
Hin6I GCGC 1 cut(s) 181
HinP1I GCGC 1 cut(s) 181
HindIII AAGCTT 1 cut(s) 653
HinfI GANTC 6 cut(s) 194, 257, 412, 707, 1106, 1295
HpaII CCGG 2 cut(s) 105, 177
HphI GGTGA 5 cut(s) 299, 595, 644, 661, 716
Hpy166II GTNNAC 4 cut(s) 555, 603, 1105, 1271
Hpy188I TCNGA 5 cut(s) 203, 262, 421, 1011, 1195
Hpy188III TCNNGA 2 cut(s) 711, 1292
Hpy8I GTNNAC 4 cut(s) 555, 603, 1105, 1271
HpyAV CCTTC 2 cut(s) 5, 1200
HpyCH4III ACNGT 4 cut(s) 90, 287, 562, 1057
HpyCH4IV ACGT 2 cut(s) 472, 1005
HpyCH4V TGCA 9 cut(s) 56, 138, 314, 322, 524, 590, 675, 728, 925
HpyF10VI GCNNNNNNNGC 1 cut(s) 857
HpyF3I CTNAG 5 cut(s) 628, 722, 772, 861, 1010
HpySE526I ACGT 2 cut(s) 472, 1005
Hsp92II CATG 4 cut(s) 326, 353, 679, 1124
HspAI GCGC 1 cut(s) 181
Kzo9I GATC 1 cut(s) 153
LmnI GCTCC 4 cut(s) 262, 1129, 1148, 1217
Lsp1109I GCAGC 3 cut(s) 58, 788, 979
LweI GCATC 7 cut(s) 65, 91, 280, 301, 323, 599, 1186
MabI ACCWGGT 1 cut(s) 1273
MaeI CTAG 4 cut(s) 75, 620, 852, 1226
MaeII ACGT 2 cut(s) 472, 1005
MaeIII GTNAC 4 cut(s) 562, 704, 816, 1111
MalI GATC 1 cut(s) 155
MboI GATC 1 cut(s) 153
MboII GAAGA 5 cut(s) 266, 341, 659, 896, 1031
MfeI CAATTG 2 cut(s) 729, 1098
MlsI TGGCCA 1 cut(s) 1119
MluCI AATT 8 cut(s) 139, 339, 538, 690, 729, 1098, 1229, 1263
MluNI TGGCCA 1 cut(s) 1119
MlyI GAGTC 3 cut(s) 266, 701, 1100
MmeI TCCRAC 3 cut(s) 240, 446, 918
MnlI CCTC 9 cut(s) 184, 197, 325, 674, 710, 753, 820, 1137, 1200
Mox20I TGGCCA 1 cut(s) 1119
Mph1103I ATGCAT 1 cut(s) 316
MroXI GAANNNNTTC 1 cut(s) 656
MscI TGGCCA 1 cut(s) 1119
MseI TTAA 3 cut(s) 581, 1182, 1203
MslI CAYNNNNRTG 1 cut(s) 647
Msp20I TGGCCA 1 cut(s) 1119
MspA1I CMGCKG 1 cut(s) 1067
MspCI CTTAAG 1 cut(s) 580
MspI CCGG 2 cut(s) 105, 177
MspR9I CCNGG 3 cut(s) 178, 961, 1275
MunI CAATTG 2 cut(s) 729, 1098
Mva1269I GAATGC 1 cut(s) 623
MvaI CCWGG 2 cut(s) 961, 1275
MwoI GCNNNNNNNGC 1 cut(s) 857
NciI CCSGG 1 cut(s) 178
NdeI CATATG 1 cut(s) 134
NdeII GATC 1 cut(s) 153
NlaIII CATG 4 cut(s) 326, 353, 679, 1124
NlaIV GGNNCC 1 cut(s) 942
NmuCI GTSAC 3 cut(s) 562, 704, 1111
NsiI ATGCAT 1 cut(s) 316
NspI RCATGY 1 cut(s) 326
OliI CACNNNNGTG 1 cut(s) 647
PaeR7I CTCGAG 1 cut(s) 477
PcsI WCGNNNNNNNCGW 1 cut(s) 1011
PctI GAATGC 1 cut(s) 623
PdmI GAANNNNTTC 1 cut(s) 656
PfeI GAWTC 3 cut(s) 194, 412, 1295
PkrI GCNGC 4 cut(s) 73, 778, 969, 1096
PleI GAGTC 3 cut(s) 265, 701, 1100
PpsI GAGTC 3 cut(s) 265, 701, 1100
Ppu21I YACGTR 1 cut(s) 473
PshBI ATTAAT 1 cut(s) 1182
Psp1406I AACGTT 1 cut(s) 1005
Psp6I CCWGG 2 cut(s) 959, 1273
PspGI CCWGG 2 cut(s) 959, 1273
PspN4I GGNNCC 1 cut(s) 942
PspPI GGNCC 2 cut(s) 1026, 1289
PspXI VCTCGAGB 1 cut(s) 477
PstNI CAGNNNCTG 1 cut(s) 868
PvuII CAGCTG 1 cut(s) 1067
RsaI GTAC 3 cut(s) 87, 475, 921
RsaNI GTAC 3 cut(s) 86, 474, 920
RseI CAYNNNNRTG 1 cut(s) 647
SaqAI TTAA 3 cut(s) 581, 1182, 1203
SatI GCNGC 4 cut(s) 72, 777, 968, 1095
Sau3AI GATC 1 cut(s) 153
Sau96I GGNCC 2 cut(s) 1026, 1289
SchI GAGTC 3 cut(s) 266, 701, 1100
ScrFI CCNGG 3 cut(s) 178, 961, 1275
SexAI ACCWGGT 1 cut(s) 1273
SfaNI GCATC 7 cut(s) 65, 91, 280, 301, 323, 599, 1186
SfcI CTRYAG 1 cut(s) 558
Sfr274I CTCGAG 1 cut(s) 477
SinI GGWCC 1 cut(s) 1289
SlaI CTCGAG 1 cut(s) 477
SmiMI CAYNNNNRTG 1 cut(s) 647
SmlI CTYRAG 2 cut(s) 477, 580
SmoI CTYRAG 2 cut(s) 477, 580
Sse9I AATT 8 cut(s) 139, 339, 538, 690, 729, 1098, 1229, 1263
SsiI CCGC 2 cut(s) 345, 1094
SspI AATATT 1 cut(s) 1186
SspMI CTAG 4 cut(s) 75, 620, 852, 1226
StyD4I CCNGG 3 cut(s) 176, 959, 1273
StyI CCWWGG 2 cut(s) 165, 1029
TaaI ACNGT 4 cut(s) 90, 287, 562, 1057
TaiI ACGT 2 cut(s) 475, 1008
TaqI TCGA 3 cut(s) 426, 478, 1211
TasI AATT 8 cut(s) 139, 339, 538, 690, 729, 1098, 1229, 1263
TatI WGTACW 2 cut(s) 85, 919
TauI GCSGC 1 cut(s) 1097
TfiI GAWTC 3 cut(s) 194, 412, 1295
Tru1I TTAA 3 cut(s) 581, 1182, 1203
Tru9I TTAA 3 cut(s) 581, 1182, 1203
TscAI CASTG 2 cut(s) 592, 667
TseFI GTSAC 3 cut(s) 562, 704, 1111
TseI GCWGC 3 cut(s) 71, 776, 967
Tsp45I GTSAC 3 cut(s) 562, 704, 1111
TspDTI ATGAA 7 cut(s) 17, 132, 444, 468, 886, 1272, 1299
TspGWI ACGGA 2 cut(s) 1077, 1099
TspRI CASTG 2 cut(s) 592, 667
Vha464I CTTAAG 1 cut(s) 580
VpaK11BI GGWCC 1 cut(s) 1289
VspI ATTAAT 1 cut(s) 1182
XceI RCATGY 1 cut(s) 326
XhoI CTCGAG 1 cut(s) 477
XmiI GTMKAC 2 cut(s) 554, 1104
XmnI GAANNNNTTC 1 cut(s) 656
XspI CTAG 4 cut(s) 75, 620, 852, 1226
Zsp2I ATGCAT 1 cut(s) 316
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.