RLG00000011515

serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
Physical Location & Seq
Forward (+)
10135166 .. 10138778
3613 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000011515

Sequence Viewer

Length: 1542 bp
ATGGCAAGCATGAGAATTACCAAAACCAAAGAGTTTTTTCCTCTTATATTGTGCTTGATATCGTTCTTCAGTAGCTTCTTTTCATTTTCATCTTATGCAACAGATACACTTACATCCAAAGGCACACTAAGAAACAATGAAACCCTGGTATCAAATGGTGGGATTTTCGAGCTTGGCTTCTTCAGCACTGAAAGCTTTTCAGACTATCACTATCTGGGGATATGGTTGAGAGCTGATGCAAACAAGGTTGTCTGGGTTGACCGTGAAAATCCCATTTTGGCTTCCTCTGGCTTGCTTCAAATTTGGTCTGGGAATTTGGTTCTCACGGACAGGCGACAAGTGCAATTGATAGTGAATTCTGGATATGTTGCCACTGCCACAACTAACACAAGTGCAACACTTCTTGACACTGGGAATTTGGTCCTTAAGGAAGCAGATACGGGTACTATTATATGGCAGAGTTTTGATATTCCAAGCGATACATATCTTCCTGGTATGAAACTTGGGTTGTTTGGCCTAAACAGTACAAACAAGCCAGGCTTTCACATGCTTGTTTCTTGGGTAAGCCCCAAAGACCCTGCTCGTGGCCTCTTCACCTTAACTGTTGATGGCACCAACTTAACAAAGCTTCAAGGCAAGTTGCTAGTAGGACAGGAAATTGCAGTTAAAAGGCTGTCCAAAATTTCCCGGCAAGGATTGAGGGAGTTCAAAAATGAAGTCTCAGTAATTTGTAAGCTCCAGCACAGGAATTTGGTTCGGCTTTTGGGGTGCTGCATTGAAGCAGAAGAGAGTATACTAATTTATGAGTACATGCCCAACAAAAGTCTGGATTGCTTCATTTTTGATTCAACCAACCGGGCACTTATGGATTGGAGGAGGTGTATTGGCATCATTGAAGGGATTGCTCAAGGTCTTCTCTATCTTCATAAATACTCAAGATTAAGGATCATTCACCGTGATTTAAAGACCAGCAATATACTGTTGGACAGTGAGATGAACCCGAAAATTTCTGATTTTGGCATGGCTAGAATTTTTGGGGAGGACGACAGTAGAGGAAAAACGAATCGGGTTGTTGGTACATTTGGTTACATGTCTCCTGAGTACGCCATGGACGGCCTGTTTTCTGAAAAATCAGATGTCTTTAGCTTTGGCGTGATCATATTAGAGATCATAAGTTGCAAGAAGAACATTGCCTTCTTTGAGACTGATCATTCTTTGAACTTACTTGGAAAAGCTTGGTATTTGTGGAAAGAAGGCAATGGTATGGACTTGATTGATTCTACTCTCAGCGCTTCTTGTTCAAGCAGTGAAGTTATGAGATGCATACAAATGGGTCTTTTGTGCGTCCAAGAAAGAGCTATGGATCGACCAAATATGTCAGATGTTGTTTCGATGCTAAGCAATGAATCAATTGCTCTGCCTGTTCCTAAAGAACCTGCATTTTTGAATCAGTTAGATTCTGCTAATGCAGATATATCTTCAAGTAAGCAAAGATGTAGCTGTAACAATGATATAACAGTTTCCTCAGAACATGCCAGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

514

Amino Acids

57.32

Weight (kDa)

6.22

Isoelectric Point (pI)

41.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 83 - 171 1.1e-22 D-mannose binding lectin
PK_Tyr_Ser-Thr PF07714 216 - 465 3.1e-42 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 217 - 395 4.1e-37 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000509)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g29542 FvH4_2g29543 FvH4_2g29543 FvH4_2g29543 FvH4_2g29543 FvH4_2g29544 FvH4_2g29545 FvH4_2g29545 FvH4_2g29545 FvH4_2g29545 FvH4_2g29545 FvH4_2g29560
malus_domestica MD15G1121300.v1.1
prunus_persica Prupe.1G473900_v2.0.a1 Prupe.1G474000_v2.0.a1 Prupe.1G474000_v2.0.a1 Prupe.1G474000_v2.0.a1 Prupe.1G474000_v2.0.a1 Prupe.1G474100_v2.0.a1 Prupe.1G474300_v2.0.a1 Prupe.1G474500_v2.0.a1
rosa_chinensis RchiOBHm_Chr6g0298411 RchiOBHm_Chr6g0298421 RchiOBHm_Chr6g0298431 RchiOBHm_Chr6g0298441 RchiOBHm_Chr6g0298451 RchiOBHm_Chr6g0298461 RchiOBHm_Chr6g0298471 RchiOBHm_Chr6g0298481 RchiOBHm_Chr6g0298491 RchiOBHm_Chr6g0298501 RchiOBHm_Chr6g0298521
rosa_laevigata RLG00000011506 RLG00000011508 RLG00000011509 RLG00000011511 RLG00000011513 RLG00000011514 RLG00000011515
rosa_multiflora Rmu_co8314937.1_g000001 Rmu_co8319199.1_g000001 Rmu_sc0004500.1_g000002 Rmu_sc0006543.1_g000001 Rmu_ssc0000289.1_g000039 Rmu_ssc0000289.1_g000040 Rmu_ssc0000289.1_g000047 Rmu_ssc0000289.1_g000048 Rmu_ssc0000289.1_g000049 Rmu_ssc0000289.1_g000051
rosa_roxburghii Rroxscaffold_7G00169570 Rroxscaffold_7G00169580 Rroxscaffold_7G00169600 Rroxscaffold_7G00169610 Rroxscaffold_7G00169620 Rroxscaffold_7G00169630 Rroxscaffold_7G00169650 Rroxscaffold_7G00169660 Rroxscaffold_7G00169670
rosa_rugosa Rorug06G0280700 Rorug06G0280800 Rorug06G0280900
rosa_samantha Rh6AG391700 Rh6AG391800 Rh6AG392000 Rh6AG392100 Rh6AG392200 Rh6BG399300 Rh6BG399400 Rh6BG399500 Rh6BG399700 Rh6BG400000 Rh6CG405400 Rh6CG405500 Rh6CG405600 Rh6CG405700 Rh6CG405800 Rh6DG391800 Rh6DG391900 Rh6DG392000 Rh6DG392100 Rh6DG392300
rosa_wichuraiana Rw6G034230 Rw6G034240 Rw6G034250 Rw6G034260 Rw6G034270 Rw6G034280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1444
AccB1I GGYRCC 1 cut(s) 611
AccI GTMKAC 1 cut(s) 793
AclWI GGATC 2 cut(s) 953, 1371
AcsI RAATTY 8 cut(s) 300, 313, 355, 415, 681, 748, 1005, 1029
AcuI CTGAAG 2 cut(s) 52, 166
AfaI GTAC 5 cut(s) 445, 526, 809, 1078, 1103
AfeI AGCGCT 1 cut(s) 1291
AfiI CCNNNNNNNGG 1 cut(s) 584
AflII CTTAAG 1 cut(s) 425
AflIII ACRYGT 1 cut(s) 1089
AjnI CCWGG 4 cut(s) 144, 490, 535, 1535
Alw26I GTCTC 3 cut(s) 724, 1098, 1196
AlwI GGATC 2 cut(s) 953, 1371
Aor51HI AGCGCT 1 cut(s) 1291
AoxI GGCC 3 cut(s) 514, 586, 1114
ApeKI GCWGC 1 cut(s) 771
ApoI RAATTY 8 cut(s) 300, 313, 355, 415, 681, 748, 1005, 1029
ArsI GACNNNNNNTTYG 2 cut(s) 702, 734
AspLEI GCGC 1 cut(s) 1292
AspS9I GGNCC 1 cut(s) 421
AsuC2I CCSGG 2 cut(s) 688, 857
AsuHPI GGTGA 2 cut(s) 586, 944
AvaII GGWCC 1 cut(s) 421
BaeGI GKGCMC 1 cut(s) 862
BaeI ACNNNNGTAYC 2 cut(s) 132, 165
BanI GGYRCC 1 cut(s) 611
BarI GAAGNNNNNNTAC 2 cut(s) 777, 809
BauI CACGAG 1 cut(s) 582
BbsI GAAGAC 1 cut(s) 905
BbvI GCAGC 1 cut(s) 758
BccI CCATC 1 cut(s) 602
BceAI ACGGC 1 cut(s) 1129
BciT130I CCWGG 4 cut(s) 146, 492, 537, 1537
BclI TGATCA 2 cut(s) 1155, 1207
BcnI CCSGG 2 cut(s) 688, 857
BcoDI GTCTC 3 cut(s) 724, 1098, 1196
BfaI CTAG 2 cut(s) 644, 1026
BfoI RGCGCY 1 cut(s) 1293
BfrI CTTAAG 1 cut(s) 425
BfuAI ACCTGC 1 cut(s) 1444
BisI GCNGC 1 cut(s) 772
BlpI GCTNAGC 1 cut(s) 1397
BlsI GCNGC 1 cut(s) 773
Bme1390I CCNGG 6 cut(s) 146, 492, 537, 688, 857, 1537
Bme18I GGWCC 1 cut(s) 421
BmgT120I GGNCC 1 cut(s) 421
BmiI GGNNCC 1 cut(s) 613
BmrFI CCNGG 6 cut(s) 146, 492, 537, 688, 857, 1537
BmrI ACTGGG 1 cut(s) 420
BmsI GCATC 4 cut(s) 226, 897, 1310, 1383
BmuI ACTGGG 1 cut(s) 420
BpiI GAAGAC 1 cut(s) 905
BpmI CTGGAG 1 cut(s) 722
Bpu1102I GCTNAGC 1 cut(s) 1397
BpuEI CTTGAG 2 cut(s) 891, 919
BpuMI CCSGG 2 cut(s) 688, 857
BsaBI GATNNNNATC 1 cut(s) 483
BsaJI CCNNGG 2 cut(s) 144, 1107
BsaXI ACNNNNNCTCC 2 cut(s) 865, 895
Bsc4I CCNNNNNNNGG 1 cut(s) 584
Bse1I ACTGG 1 cut(s) 415
Bse3DI GCAATG 3 cut(s) 1188, 1264, 1408
Bse8I GATNNNNATC 1 cut(s) 483
BseBI CCWGG 4 cut(s) 146, 492, 537, 1537
BseDI CCNNGG 2 cut(s) 144, 1107
BseGI GGATG 1 cut(s) 113
BseJI GATNNNNATC 1 cut(s) 483
BseLI CCNNNNNNNGG 1 cut(s) 584
BseMI GCAATG 3 cut(s) 1188, 1264, 1408
BseMII CTCAG 4 cut(s) 735, 1089, 1300, 1539
BseNI ACTGG 1 cut(s) 415
BseRI GAGGAG 1 cut(s) 889
BseSI GKGCMC 1 cut(s) 862
BseXI GCAGC 1 cut(s) 758
BshFI GGCC 3 cut(s) 516, 588, 1116
BshNI GGYRCC 1 cut(s) 611
BsiSI CCGG 2 cut(s) 688, 856
BslI CCNNNNNNNGG 1 cut(s) 584
BsmAI GTCTC 3 cut(s) 724, 1098, 1196
BsnI GGCC 3 cut(s) 516, 588, 1116
Bsp1286I GDGCHC 1 cut(s) 862
Bsp143I GATC 5 cut(s) 945, 1155, 1167, 1207, 1363
Bsp1720I GCTNAGC 1 cut(s) 1397
Bsp19I CCATGG 1 cut(s) 1107
BspANI GGCC 3 cut(s) 516, 588, 1116
BspCNI CTCAG 4 cut(s) 734, 1090, 1299, 1538
BspLI GGNNCC 1 cut(s) 613
BspMI ACCTGC 1 cut(s) 1444
BspPI GGATC 2 cut(s) 953, 1371
BspT107I GGYRCC 1 cut(s) 611
BspTI CTTAAG 1 cut(s) 425
BsrDI GCAATG 3 cut(s) 1188, 1264, 1408
BsrI ACTGG 1 cut(s) 415
BssECI CCNNGG 2 cut(s) 144, 1107
BssMI GATC 5 cut(s) 945, 1155, 1167, 1207, 1363
BssNAI GTATAC 1 cut(s) 794
BssSI CACGAG 1 cut(s) 582
BssT1I CCWWGG 1 cut(s) 1107
Bst1107I GTATAC 1 cut(s) 794
Bst2BI CACGAG 1 cut(s) 582
Bst2UI CCWGG 4 cut(s) 146, 492, 537, 1537
Bst4CI ACNGT 8 cut(s) 263, 524, 604, 956, 981, 989, 1049, 1519
Bst6I CTCTTC 2 cut(s) 596, 780
BstAFI CTTAAG 1 cut(s) 425
BstC8I GCNNGC 2 cut(s) 7, 293
BstDEI CTNAG 6 cut(s) 128, 721, 1098, 1286, 1397, 1525
BstDSI CCRYGG 1 cut(s) 1107
BstF5I GGATG 1 cut(s) 113
BstH2I RGCGCY 1 cut(s) 1293
BstHHI GCGC 1 cut(s) 1292
BstKTI GATC 5 cut(s) 948, 1158, 1170, 1210, 1366
BstMAI GTCTC 3 cut(s) 724, 1098, 1196
BstMBI GATC 5 cut(s) 945, 1155, 1167, 1207, 1363
BstMWI GCNNNNNNNGC 3 cut(s) 183, 192, 340
BstNI CCWGG 4 cut(s) 146, 492, 537, 1537
BstNSI RCATGY 4 cut(s) 550, 814, 1093, 1535
BstSCI CCNGG 6 cut(s) 144, 490, 535, 686, 855, 1535
BstSLI GKGCMC 1 cut(s) 862
BstV1I GCAGC 1 cut(s) 758
BstV2I GAAGAC 1 cut(s) 905
BstZ17I GTATAC 1 cut(s) 794
BsuRI GGCC 3 cut(s) 516, 588, 1116
BtgI CCRYGG 1 cut(s) 1107
BtsCI GGATG 1 cut(s) 113
BtsI GCAGTG 2 cut(s) 372, 1312
BtsIMutI CAGTG 5 cut(s) 186, 372, 408, 994, 1312
BveI ACCTGC 1 cut(s) 1444
Cac8I GCNNGC 2 cut(s) 7, 293
CfoI GCGC 1 cut(s) 1292
Cfr13I GGNCC 1 cut(s) 421
CseI GACGC 1 cut(s) 1333
Csp6I GTAC 5 cut(s) 444, 525, 808, 1077, 1102
CviAII CATG 7 cut(s) 10, 547, 811, 1021, 1090, 1108, 1532
CviQI GTAC 5 cut(s) 444, 525, 808, 1077, 1102
DdeI CTNAG 6 cut(s) 128, 721, 1098, 1286, 1397, 1525
DpnI GATC 5 cut(s) 947, 1157, 1169, 1209, 1365
DpnII GATC 5 cut(s) 945, 1155, 1167, 1207, 1363
DraI TTTAAA 1 cut(s) 963
Eam1104I CTCTTC 2 cut(s) 596, 780
EarI CTCTTC 2 cut(s) 596, 780
Eco130I CCWWGG 1 cut(s) 1107
Eco32I GATATC 1 cut(s) 60
Eco47I GGWCC 1 cut(s) 421
Eco47III AGCGCT 1 cut(s) 1291
Eco57I CTGAAG 2 cut(s) 52, 166
EcoRI GAATTC 1 cut(s) 355
EcoRII CCWGG 4 cut(s) 144, 490, 535, 1535
EcoRV GATATC 1 cut(s) 60
EcoT14I CCWWGG 1 cut(s) 1107
EcoT22I ATGCAT 1 cut(s) 1325
ErhI CCWWGG 1 cut(s) 1107
FaeI CATG 7 cut(s) 13, 550, 814, 1024, 1093, 1111, 1535
FalI AAGNNNNNCTT 2 cut(s) 524, 556
FatI CATG 7 cut(s) 9, 546, 810, 1020, 1089, 1107, 1531
FbaI TGATCA 2 cut(s) 1155, 1207
FblI GTMKAC 1 cut(s) 793
Fnu4HI GCNGC 1 cut(s) 772
FokI GGATG 1 cut(s) 100
Fsp4HI GCNGC 1 cut(s) 772
FspBI CTAG 2 cut(s) 644, 1026
GlaI GCGC 1 cut(s) 1291
GluI GCNGC 1 cut(s) 772
GsuI CTGGAG 1 cut(s) 722
HaeII RGCGCY 1 cut(s) 1293
HaeIII GGCC 3 cut(s) 516, 588, 1116
HapII CCGG 2 cut(s) 688, 856
HgaI GACGC 1 cut(s) 1333
HhaI GCGC 1 cut(s) 1292
Hin1II CATG 7 cut(s) 13, 550, 814, 1024, 1093, 1111, 1535
Hin6I GCGC 1 cut(s) 1290
HinP1I GCGC 1 cut(s) 1290
HincII GTYRAC 1 cut(s) 259
HindII GTYRAC 1 cut(s) 259
HindIII AAGCTT 3 cut(s) 193, 626, 1233
HinfI GANTC 6 cut(s) 845, 1063, 1277, 1406, 1447, 1457
HpaII CCGG 2 cut(s) 688, 856
HphI GGTGA 2 cut(s) 586, 944
Hpy166II GTNNAC 2 cut(s) 259, 794
Hpy188I TCNGA 6 cut(s) 202, 1012, 1126, 1135, 1381, 1528
Hpy188III TCNNGA 5 cut(s) 360, 404, 827, 936, 1097
Hpy8I GTNNAC 2 cut(s) 259, 794
HpyAV CCTTC 3 cut(s) 890, 1204, 1247
HpyCH4III ACNGT 8 cut(s) 263, 524, 604, 956, 981, 989, 1049, 1519
HpyF10VI GCNNNNNNNGC 3 cut(s) 183, 192, 340
HpyF3I CTNAG 6 cut(s) 128, 721, 1098, 1286, 1397, 1525
Hsp92II CATG 7 cut(s) 13, 550, 814, 1024, 1093, 1111, 1535
HspAI GCGC 1 cut(s) 1290
Ksp22I TGATCA 2 cut(s) 1155, 1207
Kzo9I GATC 5 cut(s) 945, 1155, 1167, 1207, 1363
LmnI GCTCC 1 cut(s) 741
Lsp1109I GCAGC 1 cut(s) 758
LweI GCATC 4 cut(s) 226, 897, 1310, 1383
MaeI CTAG 2 cut(s) 644, 1026
MaeIII GTNAC 2 cut(s) 1085, 1502
MalI GATC 5 cut(s) 947, 1157, 1169, 1209, 1365
MboI GATC 5 cut(s) 945, 1155, 1167, 1207, 1363
MboII GAAGA 9 cut(s) 58, 172, 479, 583, 797, 905, 914, 1195, 1470
MfeI CAATTG 2 cut(s) 344, 1410
MhlI GDGCHC 1 cut(s) 862
MmeI TCCRAC 1 cut(s) 963
MnlI CCTC 9 cut(s) 51, 295, 599, 693, 867, 870, 1033, 1046, 1534
Mph1103I ATGCAT 1 cut(s) 1325
MseI TTAA 6 cut(s) 426, 599, 620, 666, 941, 962
MslI CAYNNNNRTG 1 cut(s) 1328
MspCI CTTAAG 1 cut(s) 425
MspI CCGG 2 cut(s) 688, 856
MspR9I CCNGG 6 cut(s) 146, 492, 537, 688, 857, 1537
MunI CAATTG 2 cut(s) 344, 1410
MvaI CCWGG 4 cut(s) 146, 492, 537, 1537
MwoI GCNNNNNNNGC 3 cut(s) 183, 192, 340
NciI CCSGG 2 cut(s) 688, 857
NcoI CCATGG 1 cut(s) 1107
NdeII GATC 5 cut(s) 945, 1155, 1167, 1207, 1363
NlaIII CATG 7 cut(s) 13, 550, 814, 1024, 1093, 1111, 1535
NlaIV GGNNCC 1 cut(s) 613
NsiI ATGCAT 1 cut(s) 1325
NspI RCATGY 4 cut(s) 550, 814, 1093, 1535
PciI ACATGT 1 cut(s) 1089
PfeI GAWTC 6 cut(s) 845, 1063, 1277, 1406, 1447, 1457
PkrI GCNGC 1 cut(s) 773
PscI ACATGT 1 cut(s) 1089
Psp6I CCWGG 4 cut(s) 144, 490, 535, 1535
PspGI CCWGG 4 cut(s) 144, 490, 535, 1535
PspN4I GGNNCC 1 cut(s) 613
PspPI GGNCC 1 cut(s) 421
RsaI GTAC 5 cut(s) 445, 526, 809, 1078, 1103
RsaNI GTAC 5 cut(s) 444, 525, 808, 1077, 1102
RseI CAYNNNNRTG 1 cut(s) 1328
SaqAI TTAA 6 cut(s) 426, 599, 620, 666, 941, 962
SatI GCNGC 1 cut(s) 772
Sau3AI GATC 5 cut(s) 945, 1155, 1167, 1207, 1363
Sau96I GGNCC 1 cut(s) 421
ScrFI CCNGG 6 cut(s) 146, 492, 537, 688, 857, 1537
SduI GDGCHC 1 cut(s) 862
SfaNI GCATC 4 cut(s) 226, 897, 1310, 1383
SinI GGWCC 1 cut(s) 421
SmiMI CAYNNNNRTG 1 cut(s) 1328
SmlI CTYRAG 3 cut(s) 425, 906, 934
SmoI CTYRAG 3 cut(s) 425, 906, 934
SspMI CTAG 2 cut(s) 644, 1026
StyD4I CCNGG 6 cut(s) 144, 490, 535, 686, 855, 1535
StyI CCWWGG 1 cut(s) 1107
TaaI ACNGT 8 cut(s) 263, 524, 604, 956, 981, 989, 1049, 1519
TaqI TCGA 3 cut(s) 168, 1366, 1391
TatI WGTACW 2 cut(s) 524, 807
TfiI GAWTC 6 cut(s) 845, 1063, 1277, 1406, 1447, 1457
Tru1I TTAA 6 cut(s) 426, 599, 620, 666, 941, 962
Tru9I TTAA 6 cut(s) 426, 599, 620, 666, 941, 962
TscAI CASTG 5 cut(s) 193, 379, 415, 994, 1312
TseI GCWGC 1 cut(s) 771
TspDTI ATGAA 9 cut(s) 72, 78, 153, 512, 729, 826, 914, 1010, 1419
TspGWI ACGGA 1 cut(s) 341
TspRI CASTG 5 cut(s) 193, 379, 415, 994, 1312
Vha464I CTTAAG 1 cut(s) 425
VpaK11BI GGWCC 1 cut(s) 421
XapI RAATTY 8 cut(s) 300, 313, 355, 415, 681, 748, 1005, 1029
XceI RCATGY 4 cut(s) 550, 814, 1093, 1535
XcmI CCANNNNNNNNNTGG 1 cut(s) 823
XmiI GTMKAC 1 cut(s) 793
XspI CTAG 2 cut(s) 644, 1026
Zsp2I ATGCAT 1 cut(s) 1325
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.