Domain of unknown function (DUF3403)
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 684 |
| AccB1I | GGYRCC | 1 cut(s) | 1011 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1157 |
| AccI | GTMKAC | 2 cut(s) | 750, 1131 |
| AccII | CGCG | 2 cut(s) | 534, 1140 |
| AciI | CCGC | 7 cut(s) | 256, 325, 384, 679, 1138, 1140, 1460 |
| AclWI | GGATC | 6 cut(s) | 608, 869, 1265, 1278, 1314, 1410 |
| AcoI | YGGCCR | 1 cut(s) | 369 |
| AcsI | RAATTY | 3 cut(s) | 210, 406, 895 |
| AcuI | CTGAAG | 1 cut(s) | 264 |
| AcyI | GRCGYC | 1 cut(s) | 1202 |
| AfaI | GTAC | 4 cut(s) | 352, 436, 1033, 1372 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 572, 597, 1157, 1198 |
| AgsI | TTSAA | 4 cut(s) | 178, 293, 895, 1102 |
| AjnI | CCWGG | 2 cut(s) | 138, 481 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1163, 1195, 1473, 1505 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 624, 656, 1009, 1041 |
| AluBI | AGCT | 7 cut(s) | 69, 149, 166, 508, 817, 888, 1425 |
| AluI | AGCT | 7 cut(s) | 69, 149, 166, 508, 817, 888, 1425 |
| Alw21I | GWGCWC | 1 cut(s) | 1150 |
| Alw26I | GTCTC | 2 cut(s) | 108, 507 |
| AlwI | GGATC | 6 cut(s) | 608, 869, 1265, 1278, 1314, 1410 |
| AoxI | GGCC | 2 cut(s) | 369, 1493 |
| ApeKI | GCWGC | 2 cut(s) | 888, 1236 |
| ApoI | RAATTY | 3 cut(s) | 210, 406, 895 |
| AspLEI | GCGC | 1 cut(s) | 536 |
| AspS9I | GGNCC | 1 cut(s) | 1493 |
| AsuC2I | CCSGG | 1 cut(s) | 111 |
| AsuHPI | GGTGA | 5 cut(s) | 719, 935, 952, 1038, 1324 |
| AsuII | TTCGAA | 1 cut(s) | 643 |
| BalI | TGGCCA | 1 cut(s) | 371 |
| BamHI | GGATCC | 1 cut(s) | 1270 |
| BanI | GGYRCC | 1 cut(s) | 1011 |
| BauI | CACGAG | 1 cut(s) | 10 |
| BbsI | GAAGAC | 2 cut(s) | 281, 1264 |
| Bbv12I | GWGCWC | 1 cut(s) | 1150 |
| BbvI | GCAGC | 2 cut(s) | 875, 1223 |
| BccI | CCATC | 5 cut(s) | 336, 659, 793, 833, 1151 |
| BciT130I | CCWGG | 2 cut(s) | 140, 483 |
| BcnI | CCSGG | 1 cut(s) | 111 |
| BcoDI | GTCTC | 2 cut(s) | 108, 507 |
| BfaI | CTAG | 5 cut(s) | 6, 206, 344, 818, 1382 |
| BfmI | CTRYAG | 2 cut(s) | 738, 993 |
| BfuAI | ACCTGC | 1 cut(s) | 684 |
| BisI | GCNGC | 2 cut(s) | 889, 1237 |
| BlsI | GCNGC | 2 cut(s) | 890, 1238 |
| Bme1390I | CCNGG | 3 cut(s) | 111, 140, 483 |
| BmgT120I | GGNCC | 1 cut(s) | 1493 |
| BmiI | GGNNCC | 2 cut(s) | 1013, 1272 |
| BmrFI | CCNGG | 3 cut(s) | 111, 140, 483 |
| BmrI | ACTGGG | 1 cut(s) | 891 |
| BmsI | GCATC | 2 cut(s) | 217, 1522 |
| BmuI | ACTGGG | 1 cut(s) | 891 |
| BpiI | GAAGAC | 2 cut(s) | 281, 1264 |
| Bpu14I | TTCGAA | 1 cut(s) | 643 |
| BpuMI | CCSGG | 1 cut(s) | 111 |
| BsaBI | GATNNNNATC | 1 cut(s) | 474 |
| BsaHI | GRCGYC | 1 cut(s) | 1202 |
| BsaI | GGTCTC | 1 cut(s) | 507 |
| BsaJI | CCNNGG | 6 cut(s) | 138, 366, 482, 591, 807, 1138 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 624, 654, 1009, 1039 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 572, 597, 1157, 1198 |
| Bse1I | ACTGG | 3 cut(s) | 886, 1172, 1274 |
| Bse8I | GATNNNNATC | 1 cut(s) | 474 |
| BseBI | CCWGG | 2 cut(s) | 140, 483 |
| BseDI | CCNNGG | 6 cut(s) | 138, 366, 482, 591, 807, 1138 |
| BseGI | GGATG | 4 cut(s) | 492, 670, 844, 1134 |
| BseJI | GATNNNNATC | 1 cut(s) | 474 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 572, 597, 1157, 1198 |
| BseMII | CTCAG | 2 cut(s) | 518, 1064 |
| BseNI | ACTGG | 3 cut(s) | 886, 1172, 1274 |
| BseRI | GAGGAG | 1 cut(s) | 645 |
| BseXI | GCAGC | 2 cut(s) | 875, 1223 |
| Bsh1236I | CGCG | 2 cut(s) | 534, 1140 |
| BshFI | GGCC | 2 cut(s) | 371, 1495 |
| BshNI | GGYRCC | 1 cut(s) | 1011 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1150 |
| BsiSI | CCGG | 2 cut(s) | 111, 1015 |
| BslFI | GGGAC | 3 cut(s) | 1003, 1132, 1189 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 572, 597, 1157, 1198 |
| BsmAI | GTCTC | 2 cut(s) | 108, 507 |
| BsmFI | GGGAC | 3 cut(s) | 1003, 1132, 1189 |
| BsnI | GGCC | 2 cut(s) | 371, 1495 |
| Bso31I | GGTCTC | 1 cut(s) | 507 |
| Bsp119I | TTCGAA | 1 cut(s) | 643 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1150 |
| Bsp1407I | TGTACA | 1 cut(s) | 1031 |
| Bsp143I | GATC | 7 cut(s) | 600, 820, 874, 1104, 1270, 1306, 1402 |
| Bsp19I | CCATGG | 2 cut(s) | 366, 591 |
| BspACI | CCGC | 7 cut(s) | 256, 325, 384, 679, 1138, 1140, 1460 |
| BspANI | GGCC | 2 cut(s) | 371, 1495 |
| BspCNI | CTCAG | 2 cut(s) | 517, 1063 |
| BspFNI | CGCG | 2 cut(s) | 534, 1140 |
| BspHI | TCATGA | 1 cut(s) | 1354 |
| BspLI | GGNNCC | 2 cut(s) | 1013, 1272 |
| BspMAI | CTGCAG | 2 cut(s) | 742, 997 |
| BspMI | ACCTGC | 1 cut(s) | 684 |
| BspPI | GGATC | 6 cut(s) | 608, 869, 1265, 1278, 1314, 1410 |
| BspT104I | TTCGAA | 1 cut(s) | 643 |
| BspT107I | GGYRCC | 1 cut(s) | 1011 |
| BspTNI | GGTCTC | 1 cut(s) | 507 |
| BsrGI | TGTACA | 1 cut(s) | 1031 |
| BsrI | ACTGG | 3 cut(s) | 886, 1172, 1274 |
| BssECI | CCNNGG | 6 cut(s) | 138, 366, 482, 591, 807, 1138 |
| BssMI | GATC | 7 cut(s) | 600, 820, 874, 1104, 1270, 1306, 1402 |
| BssNAI | GTATAC | 1 cut(s) | 1132 |
| BssNI | GRCGYC | 1 cut(s) | 1202 |
| BssSI | CACGAG | 1 cut(s) | 10 |
| BssT1I | CCWWGG | 2 cut(s) | 366, 591 |
| Bst1107I | GTATAC | 1 cut(s) | 1132 |
| Bst2BI | CACGAG | 1 cut(s) | 10 |
| Bst2UI | CCWGG | 2 cut(s) | 140, 483 |
| Bst4CI | ACNGT | 4 cut(s) | 127, 515, 906, 1189 |
| BstACI | GRCGYC | 1 cut(s) | 1202 |
| BstAUI | TGTACA | 1 cut(s) | 1031 |
| BstBI | TTCGAA | 1 cut(s) | 643 |
| BstDEI | CTNAG | 2 cut(s) | 504, 1050 |
| BstDSI | CCRYGG | 4 cut(s) | 366, 591, 807, 1138 |
| BstEII | GGTNACC | 1 cut(s) | 251 |
| BstF5I | GGATG | 4 cut(s) | 492, 670, 844, 1134 |
| BstFNI | CGCG | 2 cut(s) | 534, 1140 |
| BstHHI | GCGC | 1 cut(s) | 536 |
| BstKTI | GATC | 7 cut(s) | 603, 823, 877, 1107, 1273, 1309, 1405 |
| BstMAI | GTCTC | 2 cut(s) | 108, 507 |
| BstMBI | GATC | 7 cut(s) | 600, 820, 874, 1104, 1270, 1306, 1402 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 377 |
| BstNI | CCWGG | 2 cut(s) | 140, 483 |
| BstPI | GGTNACC | 1 cut(s) | 251 |
| BstSCI | CCNGG | 3 cut(s) | 109, 138, 481 |
| BstSFI | CTRYAG | 2 cut(s) | 738, 993 |
| BstUI | CGCG | 2 cut(s) | 534, 1140 |
| BstV1I | GCAGC | 2 cut(s) | 875, 1223 |
| BstV2I | GAAGAC | 2 cut(s) | 281, 1264 |
| BstX2I | RGATCY | 2 cut(s) | 1270, 1306 |
| BstYI | RGATCY | 2 cut(s) | 1270, 1306 |
| BstZ17I | GTATAC | 1 cut(s) | 1132 |
| BsuRI | GGCC | 2 cut(s) | 371, 1495 |
| BtgI | CCRYGG | 4 cut(s) | 366, 591, 807, 1138 |
| BtsCI | GGATG | 4 cut(s) | 492, 670, 844, 1134 |
| BtsI | GCAGTG | 2 cut(s) | 735, 950 |
| BtsIMutI | CAGTG | 2 cut(s) | 735, 950 |
| BveI | ACCTGC | 1 cut(s) | 684 |
| CciI | TCATGA | 1 cut(s) | 1354 |
| CfoI | GCGC | 1 cut(s) | 536 |
| Cfr13I | GGNCC | 1 cut(s) | 1493 |
| Cfr42I | CCGCGG | 1 cut(s) | 1141 |
| CseI | GACGC | 2 cut(s) | 284, 1191 |
| Csp6I | GTAC | 4 cut(s) | 351, 435, 1032, 1371 |
| CviAII | CATG | 7 cut(s) | 367, 592, 787, 910, 1091, 1355, 1532 |
| CviQI | GTAC | 4 cut(s) | 351, 435, 1032, 1371 |
| DdeI | CTNAG | 2 cut(s) | 504, 1050 |
| DpnI | GATC | 7 cut(s) | 602, 822, 876, 1106, 1272, 1308, 1404 |
| DpnII | GATC | 7 cut(s) | 600, 820, 874, 1104, 1270, 1306, 1402 |
| EaeI | YGGCCR | 1 cut(s) | 369 |
| Eco130I | CCWWGG | 2 cut(s) | 366, 591 |
| Eco31I | GGTCTC | 1 cut(s) | 507 |
| Eco57I | CTGAAG | 1 cut(s) | 264 |
| Eco91I | GGTNACC | 1 cut(s) | 251 |
| EcoO65I | GGTNACC | 1 cut(s) | 251 |
| EcoRI | GAATTC | 1 cut(s) | 895 |
| EcoRII | CCWGG | 2 cut(s) | 138, 481 |
| EcoT14I | CCWWGG | 2 cut(s) | 366, 591 |
| ErhI | CCWWGG | 2 cut(s) | 366, 591 |
| FaeI | CATG | 7 cut(s) | 370, 595, 790, 913, 1094, 1358, 1535 |
| FaqI | GGGAC | 3 cut(s) | 1003, 1132, 1189 |
| FatI | CATG | 7 cut(s) | 366, 591, 786, 909, 1090, 1354, 1531 |
| FblI | GTMKAC | 2 cut(s) | 750, 1131 |
| Fnu4HI | GCNGC | 2 cut(s) | 889, 1237 |
| FokI | GGATG | 4 cut(s) | 499, 677, 851, 1121 |
| Fsp4HI | GCNGC | 2 cut(s) | 889, 1237 |
| FspBI | CTAG | 5 cut(s) | 6, 206, 344, 818, 1382 |
| GlaI | GCGC | 1 cut(s) | 535 |
| GluI | GCNGC | 2 cut(s) | 889, 1237 |
| HaeIII | GGCC | 2 cut(s) | 371, 1495 |
| HapII | CCGG | 2 cut(s) | 111, 1015 |
| HgaI | GACGC | 2 cut(s) | 284, 1191 |
| HhaI | GCGC | 1 cut(s) | 536 |
| Hin1I | GRCGYC | 1 cut(s) | 1202 |
| Hin1II | CATG | 7 cut(s) | 370, 595, 790, 913, 1094, 1358, 1535 |
| Hin6I | GCGC | 1 cut(s) | 534 |
| HinP1I | GCGC | 1 cut(s) | 534 |
| HincII | GTYRAC | 1 cut(s) | 553 |
| HindII | GTYRAC | 1 cut(s) | 553 |
| HinfI | GANTC | 5 cut(s) | 307, 398, 616, 1004, 1340 |
| HpaII | CCGG | 2 cut(s) | 111, 1015 |
| HphI | GGTGA | 5 cut(s) | 719, 935, 952, 1038, 1324 |
| Hpy166II | GTNNAC | 5 cut(s) | 553, 751, 950, 1088, 1132 |
| Hpy188I | TCNGA | 4 cut(s) | 26, 221, 1053, 1367 |
| Hpy188III | TCNNGA | 5 cut(s) | 282, 395, 402, 1355, 1406 |
| Hpy8I | GTNNAC | 5 cut(s) | 553, 751, 950, 1088, 1132 |
| HpyAV | CCTTC | 7 cut(s) | 937, 966, 1108, 1202, 1283, 1393, 1475 |
| HpyCH4III | ACNGT | 4 cut(s) | 127, 515, 906, 1189 |
| HpyCH4IV | ACGT | 1 cut(s) | 1261 |
| HpyCH4V | TGCA | 5 cut(s) | 92, 230, 740, 995, 1445 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 377 |
| HpyF3I | CTNAG | 2 cut(s) | 504, 1050 |
| HpySE526I | ACGT | 1 cut(s) | 1261 |
| Hsp92I | GRCGYC | 1 cut(s) | 1202 |
| Hsp92II | CATG | 7 cut(s) | 370, 595, 790, 913, 1094, 1358, 1535 |
| HspAI | GCGC | 1 cut(s) | 534 |
| KspI | CCGCGG | 1 cut(s) | 1141 |
| Kzo9I | GATC | 7 cut(s) | 600, 820, 874, 1104, 1270, 1306, 1402 |
| LmnI | GCTCC | 3 cut(s) | 885, 1017, 1153 |
| Lsp1109I | GCAGC | 2 cut(s) | 875, 1223 |
| LweI | GCATC | 2 cut(s) | 217, 1522 |
| MaeI | CTAG | 5 cut(s) | 6, 206, 344, 818, 1382 |
| MaeII | ACGT | 1 cut(s) | 1261 |
| MaeIII | GTNAC | 7 cut(s) | 182, 197, 251, 515, 725, 1276, 1341 |
| MalI | GATC | 7 cut(s) | 602, 822, 876, 1106, 1272, 1308, 1404 |
| MboI | GATC | 7 cut(s) | 600, 820, 874, 1104, 1270, 1306, 1402 |
| MboII | GAAGA | 9 cut(s) | 72, 166, 281, 470, 843, 856, 1114, 1266, 1269 |
| MfeI | CAATTG | 1 cut(s) | 1021 |
| MflI | RGATCY | 2 cut(s) | 1270, 1306 |
| MhlI | GDGCHC | 1 cut(s) | 1150 |
| MlsI | TGGCCA | 1 cut(s) | 371 |
| MluNI | TGGCCA | 1 cut(s) | 371 |
| MlyI | GAGTC | 2 cut(s) | 392, 1349 |
| MmeI | TCCRAC | 2 cut(s) | 902, 1229 |
| Mox20I | TGGCCA | 1 cut(s) | 371 |
| MscI | TGGCCA | 1 cut(s) | 371 |
| MseI | TTAA | 4 cut(s) | 417, 510, 587, 966 |
| Msp20I | TGGCCA | 1 cut(s) | 371 |
| MspA1I | CMGCKG | 2 cut(s) | 149, 1140 |
| MspI | CCGG | 2 cut(s) | 111, 1015 |
| MspR9I | CCNGG | 3 cut(s) | 111, 140, 483 |
| MunI | CAATTG | 1 cut(s) | 1021 |
| MvaI | CCWGG | 2 cut(s) | 140, 483 |
| MvnI | CGCG | 2 cut(s) | 534, 1140 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 377 |
| NciI | CCSGG | 1 cut(s) | 111 |
| NcoI | CCATGG | 2 cut(s) | 366, 591 |
| NdeII | GATC | 7 cut(s) | 600, 820, 874, 1104, 1270, 1306, 1402 |
| NlaIII | CATG | 7 cut(s) | 370, 595, 790, 913, 1094, 1358, 1535 |
| NlaIV | GGNNCC | 2 cut(s) | 1013, 1272 |
| NmuCI | GTSAC | 3 cut(s) | 182, 725, 1341 |
| NspV | TTCGAA | 1 cut(s) | 643 |
| PagI | TCATGA | 1 cut(s) | 1354 |
| PfeI | GAWTC | 3 cut(s) | 307, 616, 1004 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1157 |
| PkrI | GCNGC | 2 cut(s) | 890, 1238 |
| PleI | GAGTC | 2 cut(s) | 392, 1348 |
| PpsI | GAGTC | 2 cut(s) | 392, 1348 |
| Psp6I | CCWGG | 2 cut(s) | 138, 481 |
| PspEI | GGTNACC | 1 cut(s) | 251 |
| PspGI | CCWGG | 2 cut(s) | 138, 481 |
| PspN4I | GGNNCC | 2 cut(s) | 1013, 1272 |
| PspPI | GGNCC | 1 cut(s) | 1493 |
| PstI | CTGCAG | 2 cut(s) | 742, 997 |
| PsuI | RGATCY | 2 cut(s) | 1270, 1306 |
| PvuII | CAGCTG | 1 cut(s) | 149 |
| RsaI | GTAC | 4 cut(s) | 352, 436, 1033, 1372 |
| RsaNI | GTAC | 4 cut(s) | 351, 435, 1032, 1371 |
| SacII | CCGCGG | 1 cut(s) | 1141 |
| SaqAI | TTAA | 4 cut(s) | 417, 510, 587, 966 |
| SatI | GCNGC | 2 cut(s) | 889, 1237 |
| Sau3AI | GATC | 7 cut(s) | 600, 820, 874, 1104, 1270, 1306, 1402 |
| Sau96I | GGNCC | 1 cut(s) | 1493 |
| SchI | GAGTC | 2 cut(s) | 392, 1349 |
| ScrFI | CCNGG | 3 cut(s) | 111, 140, 483 |
| SduI | GDGCHC | 1 cut(s) | 1150 |
| SfaNI | GCATC | 2 cut(s) | 217, 1522 |
| SfcI | CTRYAG | 2 cut(s) | 738, 993 |
| Sfr303I | CCGCGG | 1 cut(s) | 1141 |
| SfuI | TTCGAA | 1 cut(s) | 643 |
| SgrBI | CCGCGG | 1 cut(s) | 1141 |
| SsiI | CCGC | 7 cut(s) | 256, 325, 384, 679, 1138, 1140, 1460 |
| SspMI | CTAG | 5 cut(s) | 6, 206, 344, 818, 1382 |
| StyD4I | CCNGG | 3 cut(s) | 109, 138, 481 |
| StyI | CCWWGG | 2 cut(s) | 366, 591 |
| TaaI | ACNGT | 4 cut(s) | 127, 515, 906, 1189 |
| TaiI | ACGT | 1 cut(s) | 1264 |
| TaqI | TCGA | 2 cut(s) | 162, 643 |
| TatI | WGTACW | 2 cut(s) | 350, 1031 |
| TfiI | GAWTC | 3 cut(s) | 307, 616, 1004 |
| Tru1I | TTAA | 4 cut(s) | 417, 510, 587, 966 |
| Tru9I | TTAA | 4 cut(s) | 417, 510, 587, 966 |
| TscAI | CASTG | 2 cut(s) | 742, 957 |
| TseFI | GTSAC | 3 cut(s) | 182, 725, 1341 |
| TseI | GCWGC | 2 cut(s) | 888, 1236 |
| Tsp45I | GTSAC | 3 cut(s) | 182, 725, 1341 |
| TspDTI | ATGAA | 5 cut(s) | 43, 72, 503, 759, 1374 |
| TspRI | CASTG | 2 cut(s) | 742, 957 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1157 |
| XapI | RAATTY | 3 cut(s) | 210, 406, 895 |
| XmiI | GTMKAC | 2 cut(s) | 750, 1131 |
| XspI | CTAG | 5 cut(s) | 6, 206, 344, 818, 1382 |