Rroxscaffold_7G00169570

Domain of unknown function (DUF3403)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0000509
Physical Location & Seq
Forward (+)
10166391 .. 10169940
3550 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00169570.1

Sequence Viewer

Length: 1605 bp
ATGGCTCTTCCTCTTATTATTTGCTTGATATTATTCTCAAGCTTGTTTCCATTTCCATGCCATGCAATCACAGACACGCTCACAGCTTCAGACTCGTTGAGCGACAACCAAACGCTGGTTTCTTCAGGCGGTGTCTTCGTCCTTGGATTCTTCATCGATAGCTCTTCAGGTAATCACTATCTAGGTATATGGCTGAGAGCTGATGCAAAGAGAGTTGTTTGGGTTGCCTACCGTGAAATACCTATATTGGACTCTTCCGGCGTGCTTCAAATCCGGTCAGGGAATCTGGTTGTCTCCGACCGGCGACAACTGCAGCTCATAGTCAACTCGGGAAACGTTGCCACCACCACCAACACGAGTGCAACACTTCTTGATACGGGAAATCTTGTGCTTAAGGATGAAAATACAGGTTCCACTGTATGGCAGAGCTTCGATGTACCAACTGATACATATCTTCCGGGGATGAAAGTTGGGTTGTTTGGCCTAAACACAAGCCAACAAAGCTTTCGGATTCTCACTTCCTGGGAAAGCCCTCAAAACCCTAGTCGTGGCCTCTTCACCTTCTCGCTGGATAGAATAGACTTCACTAAAATTGATGTTTGGCGAGGAGATGGACTCCAAATGCATATCGCTTTCTGGGACGGACATGATCTCCGGTTCATTTTCGAGAACACAACCGCAAACAATGACTACAACTTTAGCTACACTTCCATTAATGGAAGTGAAGCCTACTACACTTTTAGCCACAACAAGAAGTATGACCTCATGTGGTTTGTAATGGCTTCAACAGGAAACCTAGACCAGTACTTCATGGTGAATCGGAAGATTACTTCTACGAGTCATGCTTTGTGTGAAGATTCAAGTGGTGGTAATAGTGGAAAGTGCTTGACTTCTTTACCACCTATGTGTGGTAATTCTTTTAACCAGACGAATGGTTCGTTGCCGTCGACGGTTAAGGTTGACTCAATTAATATAGGGGCTAATGATTGTGAGACTTTGTGCAAGAGCAATTGTTCTTGTACTGCATATGTTTCAGTTCAGAATGATCAATCGGTTTGTCAGCTTTATTATGGGAGTAAACAGGAGTTGATGAAGATGATGGAGATAGGGTCAGGGACTATCAATGTGCGTGTTTCTGCTAATACAAATGGAAGTAGGCGAGAAGGGATTGTCATTTCGGATGAAGTGAGATTATTCCAAATTGGCTCCACCAATGCCTCACCAATTCAGTATGATCTAGCTAGGGTTGCCAATATGATGGAATTGAGCAGATCACAGAAGGATCAAGAACTGCCATTCTTTACTTTCTCTGCCATACAAACTGCAACAAATGACTTTGCAAAGGCTAATAAACTCGGGGAAGGAGGATTTGGGCCTGTCTACAAGGGGAAGCTATTAGAAGGACAGGAAATTGCAGTGAAAAGGTTATCTGAACTGTCGAGGCAAGGGTTGGAGGAGTTCAAAAACGAGGTCTTAGTCATTTGTAAGCTCCAACACAGGAACCTGGTTAGGATCTTGGGGTGCTGCATTGAAGGAGAAGAAAGTATACTAGTTTATGAGTACATGCCCAACAAAAGCTTAGATTCCTTCATTTTTGGTATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin DUF3403 PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

534

Amino Acids

59.14

Weight (kDa)

5.33

Isoelectric Point (pI)

44.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 72 - 175 6.5e-27 D-mannose binding lectin
PAN_2 PF08276 313 - 355 8.3e-06 PAN-like domain
Pkinase PF00069 447 - 531 9.5e-12 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 449 - 531 2.9e-16 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000509)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g29542 FvH4_2g29543 FvH4_2g29543 FvH4_2g29543 FvH4_2g29543 FvH4_2g29544 FvH4_2g29545 FvH4_2g29545 FvH4_2g29545 FvH4_2g29545 FvH4_2g29545 FvH4_2g29560
malus_domestica MD15G1121300.v1.1
prunus_persica Prupe.1G473900_v2.0.a1 Prupe.1G474000_v2.0.a1 Prupe.1G474000_v2.0.a1 Prupe.1G474000_v2.0.a1 Prupe.1G474000_v2.0.a1 Prupe.1G474100_v2.0.a1 Prupe.1G474300_v2.0.a1 Prupe.1G474500_v2.0.a1
rosa_chinensis RchiOBHm_Chr6g0298411 RchiOBHm_Chr6g0298421 RchiOBHm_Chr6g0298431 RchiOBHm_Chr6g0298441 RchiOBHm_Chr6g0298451 RchiOBHm_Chr6g0298461 RchiOBHm_Chr6g0298471 RchiOBHm_Chr6g0298481 RchiOBHm_Chr6g0298491 RchiOBHm_Chr6g0298501 RchiOBHm_Chr6g0298521
rosa_laevigata RLG00000011506 RLG00000011508 RLG00000011509 RLG00000011511 RLG00000011513 RLG00000011514 RLG00000011515
rosa_multiflora Rmu_co8314937.1_g000001 Rmu_co8319199.1_g000001 Rmu_sc0004500.1_g000002 Rmu_sc0006543.1_g000001 Rmu_ssc0000289.1_g000039 Rmu_ssc0000289.1_g000040 Rmu_ssc0000289.1_g000047 Rmu_ssc0000289.1_g000048 Rmu_ssc0000289.1_g000049 Rmu_ssc0000289.1_g000051
rosa_roxburghii Rroxscaffold_7G00169570 Rroxscaffold_7G00169580 Rroxscaffold_7G00169600 Rroxscaffold_7G00169610 Rroxscaffold_7G00169620 Rroxscaffold_7G00169630 Rroxscaffold_7G00169650 Rroxscaffold_7G00169660 Rroxscaffold_7G00169670
rosa_rugosa Rorug06G0280700 Rorug06G0280800 Rorug06G0280900
rosa_samantha Rh6AG391700 Rh6AG391800 Rh6AG392000 Rh6AG392100 Rh6AG392200 Rh6BG399300 Rh6BG399400 Rh6BG399500 Rh6BG399700 Rh6BG400000 Rh6CG405400 Rh6CG405500 Rh6CG405600 Rh6CG405700 Rh6CG405800 Rh6DG391800 Rh6DG391900 Rh6DG392000 Rh6DG392100 Rh6DG392300
rosa_wichuraiana Rw6G034230 Rw6G034240 Rw6G034250 Rw6G034260 Rw6G034270 Rw6G034280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 115, 420
AccI GTMKAC 3 cut(s) 947, 1380, 1546
AciI CCGC 2 cut(s) 129, 678
AclI AACGTT 1 cut(s) 336
AclWI GGATC 2 cut(s) 1290, 1520
AcuI CTGAAG 3 cut(s) 72, 108, 150
AfaI GTAC 4 cut(s) 438, 806, 1021, 1562
AfiI CCNNNNNNNGG 4 cut(s) 115, 420, 548, 908
AflII CTTAAG 1 cut(s) 392
AgsI TTSAA 5 cut(s) 269, 786, 861, 1462, 1532
AhlI ACTAGT 1 cut(s) 1549
AjnI CCWGG 2 cut(s) 521, 1503
AjuI GAANNNNNNNTTGG 4 cut(s) 489, 521, 1353, 1385
AleI CACNNNNGTG 1 cut(s) 904
Alw26I GTCTC 2 cut(s) 298, 986
AlwI GGATC 2 cut(s) 1290, 1520
Ama87I CYCGRG 2 cut(s) 328, 1355
AoxI GGCC 3 cut(s) 481, 550, 1373
ApeKI GCWGC 2 cut(s) 313, 1524
ArsI GACNNNNNNTTYG 6 cut(s) 529, 561, 919, 951, 1455, 1487
AseI ATTAAT 2 cut(s) 714, 969
AspS9I GGNCC 1 cut(s) 1373
AsuC2I CCSGG 1 cut(s) 459
AsuHPI GGTGA 3 cut(s) 550, 826, 1212
AvaI CYCGRG 2 cut(s) 328, 1355
BarI GAAGNNNNNNTAC 2 cut(s) 1530, 1562
BauI CACGAG 1 cut(s) 355
BbsI GAAGAC 1 cut(s) 127
BbvI GCAGC 2 cut(s) 325, 1511
BccI CCATC 3 cut(s) 605, 1093, 1252
BceAI ACGGC 1 cut(s) 928
BciT130I CCWGG 2 cut(s) 523, 1505
BclI TGATCA 1 cut(s) 1045
BcnI CCSGG 1 cut(s) 459
BcoDI GTCTC 2 cut(s) 298, 986
BcuI ACTAGT 1 cut(s) 1549
BfaI CTAG 6 cut(s) 182, 543, 797, 1238, 1242, 1550
BfmI CTRYAG 1 cut(s) 311
BfrI CTTAAG 1 cut(s) 392
BisI GCNGC 2 cut(s) 314, 1525
BlsI GCNGC 2 cut(s) 315, 1526
BmcAI AGTACT 1 cut(s) 806
Bme1390I CCNGG 3 cut(s) 459, 523, 1505
BmeT110I CYCGRG 2 cut(s) 328, 1355
BmgT120I GGNCC 1 cut(s) 1373
BmiI GGNNCC 3 cut(s) 412, 1207, 1502
BmrFI CCNGG 3 cut(s) 459, 523, 1505
BmsI GCATC 1 cut(s) 193
BpiI GAAGAC 1 cut(s) 127
BplI GAGNNNNNCTC 2 cut(s) 600, 632
BpuEI CTTGAG 1 cut(s) 22
BpuMI CCSGG 1 cut(s) 459
Bsa29I ATCGAT 1 cut(s) 156
BsaBI GATNNNNATC 1 cut(s) 450
BsaJI CCNNGG 3 cut(s) 142, 458, 522
BsaWI WCCGGW 2 cut(s) 273, 654
BsaXI ACNNNNNCTCC 4 cut(s) 636, 666, 1094, 1124
Bsc4I CCNNNNNNNGG 4 cut(s) 115, 420, 548, 908
Bse118I RCCGGY 1 cut(s) 300
Bse1I ACTGG 1 cut(s) 802
Bse8I GATNNNNATC 1 cut(s) 450
BseBI CCWGG 2 cut(s) 523, 1505
BseCI ATCGAT 1 cut(s) 156
BseDI CCNNGG 3 cut(s) 142, 458, 522
BseGI GGATG 3 cut(s) 403, 468, 1186
BseJI GATNNNNATC 1 cut(s) 450
BseLI CCNNNNNNNGG 4 cut(s) 115, 420, 548, 908
BseMII CTCAG 1 cut(s) 185
BseNI ACTGG 1 cut(s) 802
BseRI GAGGAG 2 cut(s) 621, 1469
BseXI GCAGC 2 cut(s) 325, 1511
Bsh1285I CGRYCG 1 cut(s) 301
BshFI GGCC 3 cut(s) 483, 552, 1375
BshVI ATCGAT 1 cut(s) 156
BsiEI CGRYCG 1 cut(s) 301
BsiHKCI CYCGRG 2 cut(s) 328, 1355
BsiSI CCGG 5 cut(s) 258, 274, 301, 458, 655
BslFI GGGAC 2 cut(s) 653, 1129
BslI CCNNNNNNNGG 4 cut(s) 115, 420, 548, 908
BsmAI GTCTC 2 cut(s) 298, 986
BsmFI GGGAC 2 cut(s) 653, 1129
BsnI GGCC 3 cut(s) 483, 552, 1375
BsoBI CYCGRG 2 cut(s) 328, 1355
Bsp143I GATC 6 cut(s) 649, 1045, 1234, 1271, 1282, 1512
BspACI CCGC 2 cut(s) 129, 678
BspANI GGCC 3 cut(s) 483, 552, 1375
BspCNI CTCAG 1 cut(s) 186
BspDI ATCGAT 1 cut(s) 156
BspLI GGNNCC 3 cut(s) 412, 1207, 1502
BspMAI CTGCAG 1 cut(s) 315
BspPI GGATC 2 cut(s) 1290, 1520
BspQI GCTCTTC 2 cut(s) 12, 169
BspTI CTTAAG 1 cut(s) 392
BsrFI RCCGGY 1 cut(s) 300
BsrI ACTGG 1 cut(s) 802
BssAI RCCGGY 1 cut(s) 300
BssECI CCNNGG 3 cut(s) 142, 458, 522
BssMI GATC 6 cut(s) 649, 1045, 1234, 1271, 1282, 1512
BssNAI GTATAC 1 cut(s) 1547
BssSI CACGAG 1 cut(s) 355
BssT1I CCWWGG 1 cut(s) 142
Bst1107I GTATAC 1 cut(s) 1547
Bst2BI CACGAG 1 cut(s) 355
Bst2UI CCWGG 2 cut(s) 523, 1505
Bst4CI ACNGT 4 cut(s) 233, 418, 952, 1437
Bst6I CTCTTC 4 cut(s) 12, 169, 259, 560
BstAFI CTTAAG 1 cut(s) 392
BstC8I GCNNGC 1 cut(s) 263
BstDEI CTNAG 3 cut(s) 194, 1474, 1579
BstF5I GGATG 3 cut(s) 403, 468, 1186
BstKTI GATC 6 cut(s) 652, 1048, 1237, 1274, 1285, 1515
BstMAI GTCTC 2 cut(s) 298, 986
BstMBI GATC 6 cut(s) 649, 1045, 1234, 1271, 1282, 1512
BstMCI CGRYCG 1 cut(s) 301
BstMWI GCNNNNNNNGC 3 cut(s) 310, 501, 1247
BstNI CCWGG 2 cut(s) 523, 1505
BstNSI RCATGY 1 cut(s) 1567
BstSCI CCNGG 3 cut(s) 457, 521, 1503
BstSFI CTRYAG 1 cut(s) 311
BstV1I GCAGC 2 cut(s) 325, 1511
BstV2I GAAGAC 1 cut(s) 127
BstX2I RGATCY 1 cut(s) 1512
BstXI CCANNNNNNTGG 2 cut(s) 932, 1258
BstYI RGATCY 1 cut(s) 1512
BstZ17I GTATAC 1 cut(s) 1547
Bsu15I ATCGAT 1 cut(s) 156
BsuRI GGCC 3 cut(s) 483, 552, 1375
BsuTUI ATCGAT 1 cut(s) 156
BtsCI GGATG 3 cut(s) 403, 468, 1186
BtsI GCAGTG 1 cut(s) 1422
BtsIMutI CAGTG 2 cut(s) 414, 1422
Cac8I GCNNGC 1 cut(s) 263
Cfr10I RCCGGY 1 cut(s) 300
Cfr13I GGNCC 1 cut(s) 1373
ClaI ATCGAT 1 cut(s) 156
CsiI ACCWGGT 1 cut(s) 1503
Csp6I GTAC 4 cut(s) 437, 805, 1020, 1561
CviAII CATG 7 cut(s) 57, 62, 647, 766, 811, 842, 1564
CviQI GTAC 4 cut(s) 437, 805, 1020, 1561
DdeI CTNAG 3 cut(s) 194, 1474, 1579
DpnI GATC 6 cut(s) 651, 1047, 1236, 1273, 1284, 1514
DpnII GATC 6 cut(s) 649, 1045, 1234, 1271, 1282, 1512
Eam1104I CTCTTC 4 cut(s) 12, 169, 259, 560
EarI CTCTTC 4 cut(s) 12, 169, 259, 560
Eco130I CCWWGG 1 cut(s) 142
Eco57I CTGAAG 3 cut(s) 72, 108, 150
Eco88I CYCGRG 2 cut(s) 328, 1355
EcoRII CCWGG 2 cut(s) 521, 1503
EcoT14I CCWWGG 1 cut(s) 142
EcoT22I ATGCAT 1 cut(s) 627
ErhI CCWWGG 1 cut(s) 142
FaeI CATG 7 cut(s) 60, 65, 650, 769, 814, 845, 1567
FaqI GGGAC 2 cut(s) 653, 1129
FatI CATG 7 cut(s) 56, 61, 646, 765, 810, 841, 1563
FauNDI CATATG 1 cut(s) 1027
FbaI TGATCA 1 cut(s) 1045
FblI GTMKAC 3 cut(s) 947, 1380, 1546
Fnu4HI GCNGC 2 cut(s) 314, 1525
FokI GGATG 3 cut(s) 410, 475, 1193
Fsp4HI GCNGC 2 cut(s) 314, 1525
FspBI CTAG 6 cut(s) 182, 543, 797, 1238, 1242, 1550
GluI GCNGC 2 cut(s) 314, 1525
HaeIII GGCC 3 cut(s) 483, 552, 1375
HapII CCGG 5 cut(s) 258, 274, 301, 458, 655
Hin1II CATG 7 cut(s) 60, 65, 650, 769, 814, 845, 1567
HincII GTYRAC 3 cut(s) 325, 948, 961
HindII GTYRAC 3 cut(s) 325, 948, 961
HindIII AAGCTT 3 cut(s) 40, 502, 1576
HpaII CCGG 5 cut(s) 258, 274, 301, 458, 655
HphI GGTGA 3 cut(s) 550, 826, 1212
Hpy166II GTNNAC 6 cut(s) 325, 948, 961, 1079, 1381, 1547
Hpy188I TCNGA 7 cut(s) 91, 298, 510, 822, 1041, 1180, 1432
Hpy188III TCNNGA 4 cut(s) 330, 371, 667, 1286
Hpy8I GTNNAC 6 cut(s) 325, 948, 961, 1079, 1381, 1547
Hpy99I CGWCG 2 cut(s) 949, 952
HpyAV CCTTC 7 cut(s) 571, 1157, 1273, 1355, 1394, 1526, 1597
HpyCH4III ACNGT 4 cut(s) 233, 418, 952, 1437
HpyCH4IV ACGT 1 cut(s) 336
HpyF10VI GCNNNNNNNGC 3 cut(s) 310, 501, 1247
HpyF3I CTNAG 3 cut(s) 194, 1474, 1579
HpySE526I ACGT 1 cut(s) 336
Hsp92II CATG 7 cut(s) 60, 65, 650, 769, 814, 845, 1567
Ksp22I TGATCA 1 cut(s) 1045
Kzo9I GATC 6 cut(s) 649, 1045, 1234, 1271, 1282, 1512
LguI GCTCTTC 2 cut(s) 12, 169
LmnI GCTCC 2 cut(s) 1211, 1494
Lsp1109I GCAGC 2 cut(s) 325, 1511
LweI GCATC 1 cut(s) 193
MabI ACCWGGT 1 cut(s) 1503
MaeI CTAG 6 cut(s) 182, 543, 797, 1238, 1242, 1550
MaeII ACGT 1 cut(s) 336
MalI GATC 6 cut(s) 651, 1047, 1236, 1273, 1284, 1514
MboI GATC 6 cut(s) 649, 1045, 1234, 1271, 1282, 1512
MfeI CAATTG 1 cut(s) 1009
MflI RGATCY 1 cut(s) 1512
MluCI AATT 8 cut(s) 591, 913, 966, 1009, 1200, 1224, 1262, 1410
MlyI GAGTC 5 cut(s) 86, 245, 609, 847, 956
MmeI TCCRAC 3 cut(s) 321, 1431, 1516
Mph1103I ATGCAT 1 cut(s) 627
MseI TTAA 5 cut(s) 393, 714, 921, 954, 969
MslI CAYNNNNRTG 2 cut(s) 55, 904
MspCI CTTAAG 1 cut(s) 392
MspI CCGG 5 cut(s) 258, 274, 301, 458, 655
MspR9I CCNGG 3 cut(s) 459, 523, 1505
MunI CAATTG 1 cut(s) 1009
MvaI CCWGG 2 cut(s) 523, 1505
MwoI GCNNNNNNNGC 3 cut(s) 310, 501, 1247
NciI CCSGG 1 cut(s) 459
NdeI CATATG 1 cut(s) 1027
NdeII GATC 6 cut(s) 649, 1045, 1234, 1271, 1282, 1512
NlaIII CATG 7 cut(s) 60, 65, 650, 769, 814, 845, 1567
NlaIV GGNNCC 3 cut(s) 412, 1207, 1502
NsiI ATGCAT 1 cut(s) 627
NspI RCATGY 1 cut(s) 1567
OliI CACNNNNGTG 1 cut(s) 904
PciSI GCTCTTC 2 cut(s) 12, 169
PcsI WCGNNNNNNNCGW 2 cut(s) 935, 944
PfeI GAWTC 6 cut(s) 147, 283, 511, 817, 857, 1583
PflMI CCANNNNNTGG 2 cut(s) 115, 420
PkrI GCNGC 2 cut(s) 315, 1526
PleI GAGTC 5 cut(s) 86, 245, 609, 846, 956
PpsI GAGTC 5 cut(s) 86, 245, 609, 846, 956
PshBI ATTAAT 2 cut(s) 714, 969
Psp1406I AACGTT 1 cut(s) 336
Psp6I CCWGG 2 cut(s) 521, 1503
PspGI CCWGG 2 cut(s) 521, 1503
PspN4I GGNNCC 3 cut(s) 412, 1207, 1502
PspPI GGNCC 1 cut(s) 1373
PstI CTGCAG 1 cut(s) 315
PsuI RGATCY 1 cut(s) 1512
RsaI GTAC 4 cut(s) 438, 806, 1021, 1562
RsaNI GTAC 4 cut(s) 437, 805, 1020, 1561
RseI CAYNNNNRTG 2 cut(s) 55, 904
SalI GTCGAC 1 cut(s) 946
SapI GCTCTTC 2 cut(s) 12, 169
SaqAI TTAA 5 cut(s) 393, 714, 921, 954, 969
SatI GCNGC 2 cut(s) 314, 1525
Sau3AI GATC 6 cut(s) 649, 1045, 1234, 1271, 1282, 1512
Sau96I GGNCC 1 cut(s) 1373
ScaI AGTACT 1 cut(s) 806
SchI GAGTC 5 cut(s) 86, 245, 609, 847, 956
ScrFI CCNGG 3 cut(s) 459, 523, 1505
SexAI ACCWGGT 1 cut(s) 1503
SfaNI GCATC 1 cut(s) 193
SfcI CTRYAG 1 cut(s) 311
SgrDI CGTCGACG 1 cut(s) 946
SmiMI CAYNNNNRTG 2 cut(s) 55, 904
SmlI CTYRAG 2 cut(s) 37, 392
SmoI CTYRAG 2 cut(s) 37, 392
SpeI ACTAGT 1 cut(s) 1549
Sse9I AATT 8 cut(s) 591, 913, 966, 1009, 1200, 1224, 1262, 1410
SsiI CCGC 2 cut(s) 129, 678
SspMI CTAG 6 cut(s) 182, 543, 797, 1238, 1242, 1550
StyD4I CCNGG 3 cut(s) 457, 521, 1503
StyI CCWWGG 1 cut(s) 142
TaaI ACNGT 4 cut(s) 233, 418, 952, 1437
TaiI ACGT 1 cut(s) 339
TaqI TCGA 5 cut(s) 156, 432, 666, 947, 1439
TasI AATT 8 cut(s) 591, 913, 966, 1009, 1200, 1224, 1262, 1410
TatI WGTACW 3 cut(s) 804, 1019, 1560
TfiI GAWTC 6 cut(s) 147, 283, 511, 817, 857, 1583
Tru1I TTAA 5 cut(s) 393, 714, 921, 954, 969
Tru9I TTAA 5 cut(s) 393, 714, 921, 954, 969
TscAI CASTG 2 cut(s) 421, 1422
TseI GCWGC 2 cut(s) 313, 1524
TspDTI ATGAA 8 cut(s) 142, 414, 479, 649, 799, 1106, 1197, 1579
TspGWI ACGGA 1 cut(s) 657
TspRI CASTG 2 cut(s) 421, 1422
Van91I CCANNNNNTGG 2 cut(s) 115, 420
Vha464I CTTAAG 1 cut(s) 392
VspI ATTAAT 2 cut(s) 714, 969
XceI RCATGY 1 cut(s) 1567
XmiI GTMKAC 3 cut(s) 947, 1380, 1546
XspI CTAG 6 cut(s) 182, 543, 797, 1238, 1242, 1550
ZrmI AGTACT 1 cut(s) 806
Zsp2I ATGCAT 1 cut(s) 627
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.