Rroxscaffold_7G00169670

serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0000509
Physical Location & Seq
Forward (+)
10244614 .. 10249308
4695 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00169670.1

Sequence Viewer

Length: 2310 bp
ATGGCAAGCATGAGAATTACCGAAACCAAAGAGTTTTTTCCTCTTATATTGTGCTTGATATCGTTCTTCAGTAGCTTCTTTTCATTTTCATCTCATGCAACAGATACACTTACATCCGAAGGCACACTAAGAAACAATGAAACCCTGGTATCAAATGGTGGGATTTTCGAGCTTGGCTTCTTCGGCACTGAAAGCTTTTCAGACTATCACTATCTGGGGATATGGTTGAGAGCTGATGCAAACAAGGTTGTCTGGGTTGACCGTGAAAATCCCATTTTGGGTTCATCTGGCTTGCTTCAAATTTGGTCTGGGAATTTGGTTCTCACGGACAGGCGACAAGTGCAATTGATAGTCAATTCTGGATATGTTGCCACTGCCACAACTAACACAAGTGCAACACTTCTTGACACTGGAAATTTGGTCCTTAAGGAAGCAGATACGGGTACTGTTATATGGCAGAGTTTTGATATTCCAAGCGACACGTATCTTCCTGGTATGAAACTTGGGTTGTTTGGCCTAAACAGTACAAACAAGCCAGGCTTTCACATGCTTGTTTCTTGGGTAAGCCCTGAAGACCCTGCTCGTGGCCTCTTCACCTTAACTGTTGATGGCACCAACTTAACAAAGCTTAAAGTTTGGCGAGGAGATGGAGCAAAAATGGATATTGCTTTTTGGGACGGACATGGGTTACAGTTTGTTTTTGAGAACTCAACAGGGAATAATAACTACAACTTTAGTTACCACTCCAATAAATGTGAGGCCTATTACACTTTTAGCAGCAGTCAGAAGTATGATCTCATGTGGTTTGTATTGGCTTCCACTGGAAACCTTGAACAGTATGTTATGTTGGACAAGAAGATTTCTTCTGTGAGTCATACTTTGTGTGAGTATGGAGGGATGTGCTTGACTTCAATACCCTCTAAGTGTGACGATGGTGGTACTTTTCTTGAGATGAATGGTTCTTTGCCATCTACATATAATAGTGGTTCCATCAATATGAGGGCCAGTGATTGTGAAATTTTATGCAAGAACAATTGTTCTTGTACCGCATTTGCTTCAGTTCAGAATGAACAAACTGGATGTCAACTTTATTATGGGAGTACACGTGAATTATTGAAGATTATAGAGAAGGGTCCAGGGATTATTTACATCCGCGGTGGCACTCCAAGTGAAGATCAGGTAACCAGGCGGAAAGGCTATTGTGATCAAGTAAGATTATTCCAAATGGGCTCCAATTTTGCATCAACAGTTCCCCATGATGAAGTTGGAGGAGGTGCAGATAACATTGAAATAGGCAGACAGAAGCATCAAGAATTGCCCTTATTTAGTTTTTCTACCATAAAGACTGCAACAGATAACTTTGCAGATACTAATAAACTGGGGGAAGGTGGATTTGGGCCTGGCAAGTTGCTAGTAGGACAGGAAATTGCAGTCAAAAGGCTGTCCAAAATTTCCCGGCAAGGATTGAGGGAGTTCAAAAATGAAGTCTCAGTAATTTGTAAGCTCCAGCACAGGAATTTGGTTCGGCTTTTGGGGTGCTGCATTGAAGCAGAAGAGAGTATACTAATTTATGAGTACATGCCCAACAAAAGTCTGGATTGCTTCATTTTTGATTCAACCAACCGGGCACTTATGGATTGGAGGAGGTGTATTGGCATCATTGAAGGGATTGCTCAAGGTCTTCTCTATCTTCATAAATACTCAAGATTAAGGATCATTCACCGAGATTTAAAGACCAGCAATATACTGTTGGACAGTGAGATGAACCCGAAAATTTCTGATTTTGGCATGGCTAGAATTTTTGGGGACGACGACAGTAAAGGAAAAACGAATCGGGTTGTTGGTACATTTGGTTACATGTCTCCCGAGTACGCCATGGACGGCCTGTTTTCTGAAAAATCAGATGTCTTTAGCTTTGGGGTGATCATATTAGAGATCATAAGTTGCAAGAAGAACATTGCCTTCTTTGAGACTGATCATTCTTTGAACTTACTTGGAAAAGCTTGGTATTTGTGGAAAGAAGGCAATGGCATGGACTTGATTGATTCTACTCTCTGCGCTTCTTGTTCAAGCAGTGAAGTTATGAGATGCATACAAATGGGTCTTTTGTGCGTCCAAGAAAGAGCTATGGATCGACCAAATATGTCAGATGTTGTTTCGATGCTAAGCAATGAATCAATTGCTCTGCCTGTTCCTAAAGAACCTGCATTTTTGAATCAGCTAAATTCTGCTAATGCAGATATATCTTCAAGTAAGCAAAGATGTAGCTGTAACAATGATCTAACAGTTTCCTCAGAACATGCCAGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin DUF3403 PAN_2 Pkinase_Tyr

Protein Analysis

769

Amino Acids

85.45

Weight (kDa)

5.54

Isoelectric Point (pI)

37.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 83 - 170 2.9e-22 D-mannose binding lectin
PAN_2 PF08276 311 - 364 2.5e-06 PAN-like domain
Pkinase PF00069 456 - 651 7.2e-39 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 459 - 721 4.4e-42 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000509)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g29542 FvH4_2g29543 FvH4_2g29543 FvH4_2g29543 FvH4_2g29543 FvH4_2g29544 FvH4_2g29545 FvH4_2g29545 FvH4_2g29545 FvH4_2g29545 FvH4_2g29545 FvH4_2g29560
malus_domestica MD15G1121300.v1.1
prunus_persica Prupe.1G473900_v2.0.a1 Prupe.1G474000_v2.0.a1 Prupe.1G474000_v2.0.a1 Prupe.1G474000_v2.0.a1 Prupe.1G474000_v2.0.a1 Prupe.1G474100_v2.0.a1 Prupe.1G474300_v2.0.a1 Prupe.1G474500_v2.0.a1
rosa_chinensis RchiOBHm_Chr6g0298411 RchiOBHm_Chr6g0298421 RchiOBHm_Chr6g0298431 RchiOBHm_Chr6g0298441 RchiOBHm_Chr6g0298451 RchiOBHm_Chr6g0298461 RchiOBHm_Chr6g0298471 RchiOBHm_Chr6g0298481 RchiOBHm_Chr6g0298491 RchiOBHm_Chr6g0298501 RchiOBHm_Chr6g0298521
rosa_laevigata RLG00000011506 RLG00000011508 RLG00000011509 RLG00000011511 RLG00000011513 RLG00000011514 RLG00000011515
rosa_multiflora Rmu_co8314937.1_g000001 Rmu_co8319199.1_g000001 Rmu_sc0004500.1_g000002 Rmu_sc0006543.1_g000001 Rmu_ssc0000289.1_g000039 Rmu_ssc0000289.1_g000040 Rmu_ssc0000289.1_g000047 Rmu_ssc0000289.1_g000048 Rmu_ssc0000289.1_g000049 Rmu_ssc0000289.1_g000051
rosa_roxburghii Rroxscaffold_7G00169570 Rroxscaffold_7G00169580 Rroxscaffold_7G00169600 Rroxscaffold_7G00169610 Rroxscaffold_7G00169620 Rroxscaffold_7G00169630 Rroxscaffold_7G00169650 Rroxscaffold_7G00169660 Rroxscaffold_7G00169670
rosa_rugosa Rorug06G0280700 Rorug06G0280800 Rorug06G0280900
rosa_samantha Rh6AG391700 Rh6AG391800 Rh6AG392000 Rh6AG392100 Rh6AG392200 Rh6BG399300 Rh6BG399400 Rh6BG399500 Rh6BG399700 Rh6BG400000 Rh6CG405400 Rh6CG405500 Rh6CG405600 Rh6CG405700 Rh6CG405800 Rh6DG391800 Rh6DG391900 Rh6DG392000 Rh6DG392100 Rh6DG392300
rosa_wichuraiana Rw6G034230 Rw6G034240 Rw6G034250 Rw6G034260 Rw6G034270 Rw6G034280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 2212
AccB1I GGYRCC 1 cut(s) 611
AccI GTMKAC 1 cut(s) 1561
AccII CGCG 1 cut(s) 1155
AciI CCGC 4 cut(s) 1047, 1153, 1155, 1189
AclWI GGATC 2 cut(s) 1721, 2139
AcsI RAATTY 9 cut(s) 300, 313, 415, 1017, 1449, 1516, 1773, 1797, 2224
AcuI CTGAAG 3 cut(s) 52, 591, 1041
AcvI CACGTG 1 cut(s) 1106
AfaI GTAC 8 cut(s) 445, 526, 940, 1045, 1102, 1577, 1846, 1871
AfiI CCNNNNNNNGG 2 cut(s) 278, 584
AflII CTTAAG 1 cut(s) 425
AflIII ACRYGT 3 cut(s) 480, 1103, 1857
AjnI CCWGG 7 cut(s) 144, 490, 535, 1135, 1184, 1399, 2303
AjuI GAANNNNNNNTTGG 2 cut(s) 1377, 1409
Alw26I GTCTC 3 cut(s) 1492, 1866, 1964
AlwI GGATC 2 cut(s) 1721, 2139
Ama87I CYCGRG 1 cut(s) 1865
AoxI GGCC 6 cut(s) 514, 586, 759, 1002, 1397, 1882
ApeKI GCWGC 2 cut(s) 777, 1539
ApoI RAATTY 9 cut(s) 300, 313, 415, 1017, 1449, 1516, 1773, 1797, 2224
ArsI GACNNNNNNTTYG 4 cut(s) 1066, 1098, 1470, 1502
AspLEI GCGC 1 cut(s) 2060
AspS9I GGNCC 4 cut(s) 421, 1002, 1133, 1397
AsuC2I CCSGG 2 cut(s) 1456, 1625
AsuHPI GGTGA 3 cut(s) 586, 1712, 1933
AvaI CYCGRG 1 cut(s) 1865
AvaII GGWCC 2 cut(s) 421, 1133
BaeGI GKGCMC 1 cut(s) 1630
BaeI ACNNNNGTAYC 2 cut(s) 132, 165
BanI GGYRCC 1 cut(s) 611
BanII GRGCYC 1 cut(s) 1232
BarI GAAGNNNNNNTAC 2 cut(s) 1545, 1577
BauI CACGAG 1 cut(s) 582
BbrPI CACGTG 1 cut(s) 1106
BbsI GAAGAC 2 cut(s) 579, 1673
BbvI GCAGC 2 cut(s) 789, 1526
BccI CCATC 5 cut(s) 602, 641, 926, 976, 998
BceAI ACGGC 1 cut(s) 1897
BciT130I CCWGG 7 cut(s) 146, 492, 537, 1137, 1186, 1401, 2305
BclI TGATCA 3 cut(s) 1204, 1923, 1975
BcnI CCSGG 2 cut(s) 1456, 1625
BcoDI GTCTC 3 cut(s) 1492, 1866, 1964
BfaI CTAG 2 cut(s) 1412, 1794
BfrI CTTAAG 1 cut(s) 425
BfuAI ACCTGC 1 cut(s) 2212
BisI GCNGC 2 cut(s) 778, 1540
BlpI GCTNAGC 1 cut(s) 2165
BlsI GCNGC 2 cut(s) 779, 1541
Bme1390I CCNGG 9 cut(s) 146, 492, 537, 1137, 1186, 1401, 1456, 1625, 2305
Bme18I GGWCC 2 cut(s) 421, 1133
BmeT110I CYCGRG 1 cut(s) 1865
BmgT120I GGNCC 4 cut(s) 421, 1002, 1133, 1397
BmiI GGNNCC 4 cut(s) 613, 988, 1134, 1231
BmrFI CCNGG 9 cut(s) 146, 492, 537, 1137, 1186, 1401, 1456, 1625, 2305
BmrI ACTGGG 1 cut(s) 1388
BmsI GCATC 6 cut(s) 226, 1250, 1315, 1665, 2078, 2151
BmuI ACTGGG 1 cut(s) 1388
BpiI GAAGAC 2 cut(s) 579, 1673
BpmI CTGGAG 1 cut(s) 1490
Bpu1102I GCTNAGC 1 cut(s) 2165
BpuEI CTTGAG 3 cut(s) 968, 1659, 1687
BpuMI CCSGG 2 cut(s) 1456, 1625
BsaAI YACGTR 2 cut(s) 483, 1106
BsaJI CCNNGG 4 cut(s) 144, 1136, 1153, 1875
BsaXI ACNNNNNCTCC 4 cut(s) 1090, 1120, 1633, 1663
Bsc4I CCNNNNNNNGG 2 cut(s) 278, 584
Bse1I ACTGG 5 cut(s) 415, 826, 1005, 1081, 1383
Bse3DI GCAATG 3 cut(s) 1956, 2032, 2176
BseBI CCWGG 7 cut(s) 146, 492, 537, 1137, 1186, 1401, 2305
BseDI CCNNGG 4 cut(s) 144, 1136, 1153, 1875
BseGI GGATG 4 cut(s) 113, 903, 1085, 1149
BseLI CCNNNNNNNGG 2 cut(s) 278, 584
BseMI GCAATG 3 cut(s) 1956, 2032, 2176
BseMII CTCAG 2 cut(s) 1503, 2307
BseNI ACTGG 5 cut(s) 415, 826, 1005, 1081, 1383
BseRI GAGGAG 3 cut(s) 657, 1284, 1657
BseSI GKGCMC 1 cut(s) 1630
BseXI GCAGC 2 cut(s) 789, 1526
BsgI GTGCAG 1 cut(s) 1296
Bsh1236I CGCG 1 cut(s) 1155
BshFI GGCC 6 cut(s) 516, 588, 761, 1004, 1399, 1884
BshNI GGYRCC 1 cut(s) 611
BsiHKCI CYCGRG 1 cut(s) 1865
BsiSI CCGG 2 cut(s) 1456, 1624
BslFI GGGAC 2 cut(s) 689, 1820
BslI CCNNNNNNNGG 2 cut(s) 278, 584
BsmAI GTCTC 3 cut(s) 1492, 1866, 1964
BsmFI GGGAC 2 cut(s) 689, 1820
BsnI GGCC 6 cut(s) 516, 588, 761, 1004, 1399, 1884
BsoBI CYCGRG 1 cut(s) 1865
Bsp1286I GDGCHC 2 cut(s) 1232, 1630
Bsp143I GATC 9 cut(s) 793, 1174, 1204, 1713, 1923, 1935, 1975, 2131, 2278
Bsp1720I GCTNAGC 1 cut(s) 2165
Bsp19I CCATGG 1 cut(s) 1875
BspACI CCGC 4 cut(s) 1047, 1153, 1155, 1189
BspANI GGCC 6 cut(s) 516, 588, 761, 1004, 1399, 1884
BspCNI CTCAG 2 cut(s) 1502, 2306
BspFNI CGCG 1 cut(s) 1155
BspLI GGNNCC 4 cut(s) 613, 988, 1134, 1231
BspMI ACCTGC 1 cut(s) 2212
BspPI GGATC 2 cut(s) 1721, 2139
BspT107I GGYRCC 1 cut(s) 611
BspTI CTTAAG 1 cut(s) 425
BsrDI GCAATG 3 cut(s) 1956, 2032, 2176
BsrI ACTGG 5 cut(s) 415, 826, 1005, 1081, 1383
BssECI CCNNGG 4 cut(s) 144, 1136, 1153, 1875
BssMI GATC 9 cut(s) 793, 1174, 1204, 1713, 1923, 1935, 1975, 2131, 2278
BssNAI GTATAC 1 cut(s) 1562
BssSI CACGAG 1 cut(s) 582
BssT1I CCWWGG 1 cut(s) 1875
Bst1107I GTATAC 1 cut(s) 1562
Bst2BI CACGAG 1 cut(s) 582
Bst2UI CCWGG 7 cut(s) 146, 492, 537, 1137, 1186, 1401, 2305
Bst6I CTCTTC 2 cut(s) 596, 1548
BstAFI CTTAAG 1 cut(s) 425
BstBAI YACGTR 2 cut(s) 483, 1106
BstC8I GCNNGC 2 cut(s) 7, 293
BstDEI CTNAG 5 cut(s) 128, 921, 1489, 2165, 2293
BstDSI CCRYGG 2 cut(s) 1153, 1875
BstEII GGTNACC 1 cut(s) 1180
BstF5I GGATG 4 cut(s) 113, 903, 1085, 1149
BstFNI CGCG 1 cut(s) 1155
BstHHI GCGC 1 cut(s) 2060
BstKTI GATC 9 cut(s) 796, 1177, 1207, 1716, 1926, 1938, 1978, 2134, 2281
BstMAI GTCTC 3 cut(s) 1492, 1866, 1964
BstMBI GATC 9 cut(s) 793, 1174, 1204, 1713, 1923, 1935, 1975, 2131, 2278
BstMWI GCNNNNNNNGC 3 cut(s) 183, 192, 340
BstNI CCWGG 7 cut(s) 146, 492, 537, 1137, 1186, 1401, 2305
BstNSI RCATGY 4 cut(s) 550, 1582, 1861, 2303
BstPI GGTNACC 1 cut(s) 1180
BstSCI CCNGG 9 cut(s) 144, 490, 535, 1135, 1184, 1399, 1454, 1623, 2303
BstSLI GKGCMC 1 cut(s) 1630
BstUI CGCG 1 cut(s) 1155
BstV1I GCAGC 2 cut(s) 789, 1526
BstV2I GAAGAC 2 cut(s) 579, 1673
BstZ17I GTATAC 1 cut(s) 1562
BsuRI GGCC 6 cut(s) 516, 588, 761, 1004, 1399, 1884
BtgI CCRYGG 2 cut(s) 1153, 1875
BtsCI GGATG 4 cut(s) 113, 903, 1085, 1149
BtsI GCAGTG 2 cut(s) 372, 2080
BtsIMutI CAGTG 7 cut(s) 186, 372, 408, 819, 1012, 1762, 2080
BveI ACCTGC 1 cut(s) 2212
Cac8I GCNNGC 2 cut(s) 7, 293
CfoI GCGC 1 cut(s) 2060
Cfr13I GGNCC 4 cut(s) 421, 1002, 1133, 1397
Cfr42I CCGCGG 1 cut(s) 1156
CseI GACGC 1 cut(s) 2101
Csp6I GTAC 8 cut(s) 444, 525, 939, 1044, 1101, 1576, 1845, 1870
CviQI GTAC 8 cut(s) 444, 525, 939, 1044, 1101, 1576, 1845, 1870
DdeI CTNAG 5 cut(s) 128, 921, 1489, 2165, 2293
DpnI GATC 9 cut(s) 795, 1176, 1206, 1715, 1925, 1937, 1977, 2133, 2280
DpnII GATC 9 cut(s) 793, 1174, 1204, 1713, 1923, 1935, 1975, 2131, 2278
DraI TTTAAA 1 cut(s) 1731
Eam1104I CTCTTC 2 cut(s) 596, 1548
EarI CTCTTC 2 cut(s) 596, 1548
EciI GGCGGA 1 cut(s) 1204
Eco130I CCWWGG 1 cut(s) 1875
Eco147I AGGCCT 1 cut(s) 761
Eco24I GRGCYC 1 cut(s) 1232
Eco32I GATATC 1 cut(s) 60
Eco47I GGWCC 2 cut(s) 421, 1133
Eco57I CTGAAG 3 cut(s) 52, 591, 1041
Eco72I CACGTG 1 cut(s) 1106
Eco88I CYCGRG 1 cut(s) 1865
Eco91I GGTNACC 1 cut(s) 1180
EcoO65I GGTNACC 1 cut(s) 1180
EcoRII CCWGG 7 cut(s) 144, 490, 535, 1135, 1184, 1399, 2303
EcoRV GATATC 1 cut(s) 60
EcoT14I CCWWGG 1 cut(s) 1875
EcoT22I ATGCAT 1 cut(s) 2093
EcoT38I GRGCYC 1 cut(s) 1232
ErhI CCWWGG 1 cut(s) 1875
FalI AAGNNNNNCTT 2 cut(s) 524, 556
FaqI GGGAC 2 cut(s) 689, 1820
FbaI TGATCA 3 cut(s) 1204, 1923, 1975
FblI GTMKAC 1 cut(s) 1561
Fnu4HI GCNGC 2 cut(s) 778, 1540
FokI GGATG 4 cut(s) 100, 910, 1092, 1136
FriOI GRGCYC 1 cut(s) 1232
Fsp4HI GCNGC 2 cut(s) 778, 1540
FspBI CTAG 2 cut(s) 1412, 1794
GlaI GCGC 1 cut(s) 2059
GluI GCNGC 2 cut(s) 778, 1540
GsuI CTGGAG 1 cut(s) 1490
HaeIII GGCC 6 cut(s) 516, 588, 761, 1004, 1399, 1884
HapII CCGG 2 cut(s) 1456, 1624
HgaI GACGC 1 cut(s) 2101
HhaI GCGC 1 cut(s) 2060
Hin6I GCGC 1 cut(s) 2058
HinP1I GCGC 1 cut(s) 2058
HincII GTYRAC 2 cut(s) 259, 1085
HindII GTYRAC 2 cut(s) 259, 1085
HindIII AAGCTT 3 cut(s) 193, 626, 2001
HinfI GANTC 6 cut(s) 871, 1613, 1831, 2045, 2174, 2215
HpaII CCGG 2 cut(s) 1456, 1624
HphI GGTGA 3 cut(s) 586, 1712, 1933
Hpy166II GTNNAC 4 cut(s) 259, 1085, 1103, 1562
Hpy188I TCNGA 9 cut(s) 118, 202, 786, 1065, 1780, 1894, 1903, 2149, 2296
Hpy188III TCNNGA 7 cut(s) 360, 404, 947, 1310, 1595, 1704, 1865
Hpy8I GTNNAC 4 cut(s) 259, 1085, 1103, 1562
Hpy99I CGWCG 1 cut(s) 1814
HpyAV CCTTC 6 cut(s) 113, 1123, 1379, 1658, 1972, 2015
HpyCH4IV ACGT 2 cut(s) 482, 1105
HpyF10VI GCNNNNNNNGC 3 cut(s) 183, 192, 340
HpyF3I CTNAG 5 cut(s) 128, 921, 1489, 2165, 2293
HpySE526I ACGT 2 cut(s) 482, 1105
HspAI GCGC 1 cut(s) 2058
Ksp22I TGATCA 3 cut(s) 1204, 1923, 1975
KspI CCGCGG 1 cut(s) 1156
Kzo9I GATC 9 cut(s) 793, 1174, 1204, 1713, 1923, 1935, 1975, 2131, 2278
LmnI GCTCC 3 cut(s) 650, 1235, 1509
Lsp1109I GCAGC 2 cut(s) 789, 1526
LweI GCATC 6 cut(s) 226, 1250, 1315, 1665, 2078, 2151
MaeI CTAG 2 cut(s) 1412, 1794
MaeII ACGT 2 cut(s) 482, 1105
MaeIII GTNAC 6 cut(s) 687, 737, 926, 1180, 1853, 2270
MalI GATC 9 cut(s) 795, 1176, 1206, 1715, 1925, 1937, 1977, 2133, 2280
MboI GATC 9 cut(s) 793, 1174, 1204, 1713, 1923, 1935, 1975, 2131, 2278
MfeI CAATTG 3 cut(s) 344, 1033, 2178
MhlI GDGCHC 2 cut(s) 1232, 1630
MlyI GAGTC 1 cut(s) 880
MmeI TCCRAC 3 cut(s) 828, 1246, 1731
Mph1103I ATGCAT 1 cut(s) 2093
MseI TTAA 6 cut(s) 426, 599, 620, 630, 1709, 1730
MslI CAYNNNNRTG 2 cut(s) 995, 2096
MspA1I CMGCKG 1 cut(s) 1155
MspCI CTTAAG 1 cut(s) 425
MspI CCGG 2 cut(s) 1456, 1624
MspR9I CCNGG 9 cut(s) 146, 492, 537, 1137, 1186, 1401, 1456, 1625, 2305
MunI CAATTG 3 cut(s) 344, 1033, 2178
MvaI CCWGG 7 cut(s) 146, 492, 537, 1137, 1186, 1401, 2305
MvnI CGCG 1 cut(s) 1155
MwoI GCNNNNNNNGC 3 cut(s) 183, 192, 340
NciI CCSGG 2 cut(s) 1456, 1625
NcoI CCATGG 1 cut(s) 1875
NdeII GATC 9 cut(s) 793, 1174, 1204, 1713, 1923, 1935, 1975, 2131, 2278
NlaIV GGNNCC 4 cut(s) 613, 988, 1134, 1231
NmuCI GTSAC 1 cut(s) 926
NsiI ATGCAT 1 cut(s) 2093
NspI RCATGY 4 cut(s) 550, 1582, 1861, 2303
PceI AGGCCT 1 cut(s) 761
PciI ACATGT 1 cut(s) 1857
PfeI GAWTC 5 cut(s) 1613, 1831, 2045, 2174, 2215
PkrI GCNGC 2 cut(s) 779, 1541
PleI GAGTC 1 cut(s) 879
PmaCI CACGTG 1 cut(s) 1106
PmlI CACGTG 1 cut(s) 1106
PpsI GAGTC 1 cut(s) 879
Ppu21I YACGTR 2 cut(s) 483, 1106
PscI ACATGT 1 cut(s) 1857
Psp6I CCWGG 7 cut(s) 144, 490, 535, 1135, 1184, 1399, 2303
PspCI CACGTG 1 cut(s) 1106
PspEI GGTNACC 1 cut(s) 1180
PspGI CCWGG 7 cut(s) 144, 490, 535, 1135, 1184, 1399, 2303
PspN4I GGNNCC 4 cut(s) 613, 988, 1134, 1231
PspPI GGNCC 4 cut(s) 421, 1002, 1133, 1397
RsaI GTAC 8 cut(s) 445, 526, 940, 1045, 1102, 1577, 1846, 1871
RsaNI GTAC 8 cut(s) 444, 525, 939, 1044, 1101, 1576, 1845, 1870
RseI CAYNNNNRTG 2 cut(s) 995, 2096
SacII CCGCGG 1 cut(s) 1156
SaqAI TTAA 6 cut(s) 426, 599, 620, 630, 1709, 1730
SatI GCNGC 2 cut(s) 778, 1540
Sau3AI GATC 9 cut(s) 793, 1174, 1204, 1713, 1923, 1935, 1975, 2131, 2278
Sau96I GGNCC 4 cut(s) 421, 1002, 1133, 1397
SchI GAGTC 1 cut(s) 880
ScrFI CCNGG 9 cut(s) 146, 492, 537, 1137, 1186, 1401, 1456, 1625, 2305
SduI GDGCHC 2 cut(s) 1232, 1630
SfaNI GCATC 6 cut(s) 226, 1250, 1315, 1665, 2078, 2151
Sfr303I CCGCGG 1 cut(s) 1156
SgrBI CCGCGG 1 cut(s) 1156
SinI GGWCC 2 cut(s) 421, 1133
SmiMI CAYNNNNRTG 2 cut(s) 995, 2096
SmlI CTYRAG 4 cut(s) 425, 947, 1674, 1702
SmoI CTYRAG 4 cut(s) 425, 947, 1674, 1702
SseBI AGGCCT 1 cut(s) 761
SsiI CCGC 4 cut(s) 1047, 1153, 1155, 1189
SspMI CTAG 2 cut(s) 1412, 1794
StuI AGGCCT 1 cut(s) 761
StyD4I CCNGG 9 cut(s) 144, 490, 535, 1135, 1184, 1399, 1454, 1623, 2303
StyI CCWWGG 1 cut(s) 1875
TaiI ACGT 2 cut(s) 485, 1108
TaqI TCGA 3 cut(s) 168, 2134, 2159
TatI WGTACW 3 cut(s) 524, 1100, 1575
TfiI GAWTC 5 cut(s) 1613, 1831, 2045, 2174, 2215
Tru1I TTAA 6 cut(s) 426, 599, 620, 630, 1709, 1730
Tru9I TTAA 6 cut(s) 426, 599, 620, 630, 1709, 1730
TscAI CASTG 7 cut(s) 193, 379, 415, 826, 1012, 1762, 2080
TseFI GTSAC 1 cut(s) 926
TseI GCWGC 2 cut(s) 777, 1539
Tsp45I GTSAC 1 cut(s) 926
TspGWI ACGGA 2 cut(s) 341, 693
TspRI CASTG 7 cut(s) 193, 379, 415, 826, 1012, 1762, 2080
Vha464I CTTAAG 1 cut(s) 425
VpaK11BI GGWCC 2 cut(s) 421, 1133
XapI RAATTY 9 cut(s) 300, 313, 415, 1017, 1449, 1516, 1773, 1797, 2224
XceI RCATGY 4 cut(s) 550, 1582, 1861, 2303
XcmI CCANNNNNNNNNTGG 2 cut(s) 1262, 1591
XmiI GTMKAC 1 cut(s) 1561
XspI CTAG 2 cut(s) 1412, 1794
Zsp2I ATGCAT 1 cut(s) 2093
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.