Rmu_sc0004500.1_g000002

Domain of unknown function (DUF3403)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004500.1
OG0000509
Physical Location & Seq
Reverse (-)
9474 .. 12082
2609 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004500.1_g000002.1.cds

Sequence Viewer

Length: 1527 bp
atgcctagcacgagggttatcatcagaaaagaattgtgtcctcttatctgcttcatatttttatttagcttctttttatcttcatcttttgcaacagacacactaacacccggagacacacttacagtcaatcaaaccctggtttcagctggtggagttttcgagcttggcttcttcaaaagtgacttttcaggtagttactatctaggaatttggttcagagccgatgcaaacaaggttgtttgggttggtaaccgcagagttcccatattggacgcttcaggaagtcttcaaatactatctgggaatctggttcttatagaccgccatcaaaaccatttgctagtcagtacaggaaatgttgccatggccataaacgcaaccgcaacacttcttgactctggaaattttatccttaaagaagcaaatacaggtactatgctatggcaaagttttgatattcctactgatacttatcttcctgggatgaaacttggttggtctcagcttaacagtaaccagccaatctttcgcgcttttgtttcttgggtcaacccccaaaatcctgctcttggcaactttactttaaccatggataggatcaactttacaaagattcaggtttggcgaggagataaagttcgaatggatattgggttttgggatggacataacctgcggtttatttttgacaactcaacaagtggaaatgactacaattttagtcaccattccactgcagatgaagtctactttacttttagtgggaataagaattatgacctcatgtggtttgtgatggcttccacgggaaagctagatcagtattatatggtggatgggaagatttcttctgtgagtaatgctgtgtgtgatccaactgggagctgcttgaattccctaccgtccatgtgtaagattggtgatagtttttcacaggtgaagggttcactgccttctacttttaatagtggttctataaatatggggactgcagattgtgaatcttggtgccggagcaattgttcttgtacatcatttgcttcacctcagaatgagcaagtatgccaactttattacgggagtaaacatgatttattgaagatcatagagaaggggacaggaattgtatacatccgcggtggtgctccaagtgctgcagttcaatatcataatcaagaagttgattattatattggcagtataaaggcttcactgtttagtagcaacagagggagttggatcgggttaaggggccgtggagccccgaagacggcgtcgtcgtcggcggaggtgtttcgatcgaggaacagcatcaccaccaccttaggccagagaagaaatcggtctgtttcggtgtcgggcctcagatacagtccgacgagcccgtccagatccgacgtcagtgactccggcgtggtgcctgcagtctcgtcggcgcaagtgttcaggccgatagcgaaagcagtgttgagcaacgttaagaacggagtcgccgctgagccagaacgacatgatctacaatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin DUF3403 PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

508

Amino Acids

55.73

Weight (kDa)

8.71

Isoelectric Point (pI)

35.64

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000509)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g29542 FvH4_2g29543 FvH4_2g29543 FvH4_2g29543 FvH4_2g29543 FvH4_2g29544 FvH4_2g29545 FvH4_2g29545 FvH4_2g29545 FvH4_2g29545 FvH4_2g29545 FvH4_2g29560
malus_domestica MD15G1121300.v1.1
prunus_persica Prupe.1G473900_v2.0.a1 Prupe.1G474000_v2.0.a1 Prupe.1G474000_v2.0.a1 Prupe.1G474000_v2.0.a1 Prupe.1G474000_v2.0.a1 Prupe.1G474100_v2.0.a1 Prupe.1G474300_v2.0.a1 Prupe.1G474500_v2.0.a1
rosa_chinensis RchiOBHm_Chr6g0298411 RchiOBHm_Chr6g0298421 RchiOBHm_Chr6g0298431 RchiOBHm_Chr6g0298441 RchiOBHm_Chr6g0298451 RchiOBHm_Chr6g0298461 RchiOBHm_Chr6g0298471 RchiOBHm_Chr6g0298481 RchiOBHm_Chr6g0298491 RchiOBHm_Chr6g0298501 RchiOBHm_Chr6g0298521
rosa_laevigata RLG00000011506 RLG00000011508 RLG00000011509 RLG00000011511 RLG00000011513 RLG00000011514 RLG00000011515
rosa_multiflora Rmu_co8314937.1_g000001 Rmu_co8319199.1_g000001 Rmu_sc0004500.1_g000002 Rmu_sc0006543.1_g000001 Rmu_ssc0000289.1_g000039 Rmu_ssc0000289.1_g000040 Rmu_ssc0000289.1_g000047 Rmu_ssc0000289.1_g000048 Rmu_ssc0000289.1_g000049 Rmu_ssc0000289.1_g000051
rosa_roxburghii Rroxscaffold_7G00169570 Rroxscaffold_7G00169580 Rroxscaffold_7G00169600 Rroxscaffold_7G00169610 Rroxscaffold_7G00169620 Rroxscaffold_7G00169630 Rroxscaffold_7G00169650 Rroxscaffold_7G00169660 Rroxscaffold_7G00169670
rosa_rugosa Rorug06G0280700 Rorug06G0280800 Rorug06G0280900
rosa_samantha Rh6AG391700 Rh6AG391800 Rh6AG392000 Rh6AG392100 Rh6AG392200 Rh6BG399300 Rh6BG399400 Rh6BG399500 Rh6BG399700 Rh6BG400000 Rh6CG405400 Rh6CG405500 Rh6CG405600 Rh6CG405700 Rh6CG405800 Rh6DG391800 Rh6DG391900 Rh6DG392000 Rh6DG392100 Rh6DG392300
rosa_wichuraiana Rw6G034230 Rw6G034240 Rw6G034250 Rw6G034260 Rw6G034270 Rw6G034280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 1279, 1387
AatII GACGTC 1 cut(s) 1404
Acc36I ACCTGC 1 cut(s) 684
AccB1I GGYRCC 2 cut(s) 1011, 1420
AccI GTMKAC 2 cut(s) 750, 1131
AccII CGCG 2 cut(s) 534, 1140
AciI CCGC 8 cut(s) 256, 325, 384, 679, 1138, 1140, 1289, 1497
AclI AACGTT 1 cut(s) 1479
AclWI GGATC 4 cut(s) 608, 869, 1250, 1389
AcoI YGGCCR 1 cut(s) 369
AcsI RAATTY 3 cut(s) 210, 406, 895
AcuI CTGAAG 1 cut(s) 264
AcyI GRCGYC 2 cut(s) 1277, 1401
AfaI GTAC 3 cut(s) 352, 436, 1033
AfiI CCNNNNNNNGG 3 cut(s) 572, 597, 1273
AgsI TTSAA 5 cut(s) 178, 293, 895, 1102, 1166
AjnI CCWGG 2 cut(s) 138, 481
AloI GAACNNNNNNTCC 4 cut(s) 624, 656, 1009, 1041
AluBI AGCT 6 cut(s) 69, 149, 166, 508, 817, 888
AluI AGCT 6 cut(s) 69, 149, 166, 508, 817, 888
Alw21I GWGCWC 1 cut(s) 1150
Alw26I GTCTC 3 cut(s) 108, 507, 1435
AlwI GGATC 4 cut(s) 608, 869, 1250, 1389
AoxI GGCC 5 cut(s) 369, 1255, 1330, 1363, 1451
ApeKI GCWGC 2 cut(s) 888, 1157
ApoI RAATTY 3 cut(s) 210, 406, 895
ArsI GACNNNNNNTTYG 2 cut(s) 1262, 1294
AspLEI GCGC 2 cut(s) 536, 1441
AspS9I GGNCC 2 cut(s) 1255, 1363
AsuC2I CCSGG 1 cut(s) 111
AsuHPI GGTGA 5 cut(s) 719, 935, 952, 1038, 1309
AsuII TTCGAA 1 cut(s) 643
AxyI CCTNAGG 1 cut(s) 1327
BalI TGGCCA 1 cut(s) 371
BanI GGYRCC 2 cut(s) 1011, 1420
BanII GRGCYC 2 cut(s) 1267, 1388
BarI GAAGNNNNNNTAC 2 cut(s) 1195, 1227
BauI CACGAG 1 cut(s) 10
BbsI GAAGAC 2 cut(s) 281, 1277
Bbv12I GWGCWC 1 cut(s) 1150
BbvI GCAGC 2 cut(s) 875, 1144
BccI CCATC 4 cut(s) 336, 659, 793, 833
BceAI ACGGC 2 cut(s) 1242, 1290
BcgI CGANNNNNNTGC 2 cut(s) 1416, 1450
BciT130I CCWGG 2 cut(s) 140, 483
BcnI CCSGG 1 cut(s) 111
BcoDI GTCTC 3 cut(s) 108, 507, 1435
BfaI CTAG 4 cut(s) 6, 206, 344, 818
BfmI CTRYAG 4 cut(s) 738, 993, 1158, 1425
BfuAI ACCTGC 1 cut(s) 684
BisI GCNGC 3 cut(s) 889, 1158, 1497
BlpI GCTNAGC 1 cut(s) 1500
BlsI GCNGC 3 cut(s) 890, 1159, 1498
Bme1390I CCNGG 3 cut(s) 111, 140, 483
BmgT120I GGNCC 2 cut(s) 1255, 1363
BmiI GGNNCC 4 cut(s) 1013, 1256, 1264, 1422
BmrFI CCNGG 3 cut(s) 111, 140, 483
BmrI ACTGGG 1 cut(s) 891
BmsI GCATC 2 cut(s) 217, 1323
BmuI ACTGGG 1 cut(s) 891
BpiI GAAGAC 2 cut(s) 281, 1277
Bpu1102I GCTNAGC 1 cut(s) 1500
Bpu14I TTCGAA 1 cut(s) 643
BpuMI CCSGG 1 cut(s) 111
BsaBI GATNNNNATC 1 cut(s) 474
BsaHI GRCGYC 2 cut(s) 1277, 1401
BsaI GGTCTC 1 cut(s) 507
BsaJI CCNNGG 7 cut(s) 138, 366, 482, 591, 807, 1138, 1258
BsaXI ACNNNNNCTCC 4 cut(s) 624, 654, 1009, 1039
Bsc4I CCNNNNNNNGG 3 cut(s) 572, 597, 1273
Bse1I ACTGG 1 cut(s) 886
Bse21I CCTNAGG 1 cut(s) 1327
Bse8I GATNNNNATC 1 cut(s) 474
BseBI CCWGG 2 cut(s) 140, 483
BseDI CCNNGG 7 cut(s) 138, 366, 482, 591, 807, 1138, 1258
BseGI GGATG 4 cut(s) 492, 670, 844, 1134
BseJI GATNNNNATC 1 cut(s) 474
BseLI CCNNNNNNNGG 3 cut(s) 572, 597, 1273
BseMII CTCAG 4 cut(s) 518, 1064, 1381, 1491
BseNI ACTGG 1 cut(s) 886
BseRI GAGGAG 1 cut(s) 645
BseXI GCAGC 2 cut(s) 875, 1144
Bsh1236I CGCG 2 cut(s) 534, 1140
Bsh1285I CGRYCG 1 cut(s) 1304
BshFI GGCC 5 cut(s) 371, 1257, 1332, 1365, 1453
BshNI GGYRCC 2 cut(s) 1011, 1420
BsiEI CGRYCG 1 cut(s) 1304
BsiHKAI GWGCWC 1 cut(s) 1150
BsiSI CCGG 3 cut(s) 111, 1015, 1413
BslFI GGGAC 2 cut(s) 1003, 1132
BslI CCNNNNNNNGG 3 cut(s) 572, 597, 1273
BsmAI GTCTC 3 cut(s) 108, 507, 1435
BsmFI GGGAC 2 cut(s) 1003, 1132
BsnI GGCC 5 cut(s) 371, 1257, 1332, 1365, 1453
Bso31I GGTCTC 1 cut(s) 507
Bsp119I TTCGAA 1 cut(s) 643
Bsp1286I GDGCHC 3 cut(s) 1150, 1267, 1388
Bsp1407I TGTACA 1 cut(s) 1031
Bsp143I GATC 8 cut(s) 600, 820, 874, 1104, 1242, 1301, 1394, 1516
Bsp1720I GCTNAGC 1 cut(s) 1500
Bsp19I CCATGG 2 cut(s) 366, 591
BspACI CCGC 8 cut(s) 256, 325, 384, 679, 1138, 1140, 1289, 1497
BspANI GGCC 5 cut(s) 371, 1257, 1332, 1365, 1453
BspCNI CTCAG 4 cut(s) 517, 1063, 1380, 1492
BspFNI CGCG 2 cut(s) 534, 1140
BspLI GGNNCC 4 cut(s) 1013, 1256, 1264, 1422
BspMAI CTGCAG 4 cut(s) 742, 997, 1162, 1429
BspMI ACCTGC 1 cut(s) 684
BspPI GGATC 4 cut(s) 608, 869, 1250, 1389
BspT104I TTCGAA 1 cut(s) 643
BspT107I GGYRCC 2 cut(s) 1011, 1420
BspTNI GGTCTC 1 cut(s) 507
BsrGI TGTACA 1 cut(s) 1031
BsrI ACTGG 1 cut(s) 886
BssECI CCNNGG 7 cut(s) 138, 366, 482, 591, 807, 1138, 1258
BssMI GATC 8 cut(s) 600, 820, 874, 1104, 1242, 1301, 1394, 1516
BssNAI GTATAC 1 cut(s) 1132
BssNI GRCGYC 2 cut(s) 1277, 1401
BssSI CACGAG 1 cut(s) 10
BssT1I CCWWGG 2 cut(s) 366, 591
Bst1107I GTATAC 1 cut(s) 1132
Bst2BI CACGAG 1 cut(s) 10
Bst2UI CCWGG 2 cut(s) 140, 483
Bst4CI ACNGT 5 cut(s) 127, 515, 906, 1218, 1376
BstACI GRCGYC 2 cut(s) 1277, 1401
BstAUI TGTACA 1 cut(s) 1031
BstBI TTCGAA 1 cut(s) 643
BstC8I GCNNGC 1 cut(s) 1425
BstDEI CTNAG 5 cut(s) 504, 1050, 1327, 1367, 1500
BstDSI CCRYGG 5 cut(s) 366, 591, 807, 1138, 1258
BstEII GGTNACC 1 cut(s) 251
BstF5I GGATG 4 cut(s) 492, 670, 844, 1134
BstFNI CGCG 2 cut(s) 534, 1140
BstHHI GCGC 2 cut(s) 536, 1441
BstKTI GATC 8 cut(s) 603, 823, 877, 1107, 1245, 1304, 1397, 1519
BstMAI GTCTC 3 cut(s) 108, 507, 1435
BstMBI GATC 8 cut(s) 600, 820, 874, 1104, 1242, 1301, 1394, 1516
BstMCI CGRYCG 1 cut(s) 1304
BstMWI GCNNNNNNNGC 2 cut(s) 377, 1154
BstNI CCWGG 2 cut(s) 140, 483
BstPI GGTNACC 1 cut(s) 251
BstSCI CCNGG 3 cut(s) 109, 138, 481
BstSFI CTRYAG 4 cut(s) 738, 993, 1158, 1425
BstUI CGCG 2 cut(s) 534, 1140
BstV1I GCAGC 2 cut(s) 875, 1144
BstV2I GAAGAC 2 cut(s) 281, 1277
BstX2I RGATCY 1 cut(s) 1394
BstYI RGATCY 1 cut(s) 1394
BstZ17I GTATAC 1 cut(s) 1132
Bsu36I CCTNAGG 1 cut(s) 1327
BsuRI GGCC 5 cut(s) 371, 1257, 1332, 1365, 1453
BtgI CCRYGG 5 cut(s) 366, 591, 807, 1138, 1258
BtsCI GGATG 4 cut(s) 492, 670, 844, 1134
BtsI GCAGTG 3 cut(s) 735, 950, 1473
BtsIMutI CAGTG 5 cut(s) 735, 950, 1214, 1411, 1473
BveI ACCTGC 1 cut(s) 684
Cac8I GCNNGC 1 cut(s) 1425
CfoI GCGC 2 cut(s) 536, 1441
Cfr13I GGNCC 2 cut(s) 1255, 1363
Cfr42I CCGCGG 1 cut(s) 1141
CseI GACGC 2 cut(s) 284, 1266
Csp6I GTAC 3 cut(s) 351, 435, 1032
CviAII CATG 6 cut(s) 367, 592, 787, 910, 1091, 1514
CviQI GTAC 3 cut(s) 351, 435, 1032
DdeI CTNAG 5 cut(s) 504, 1050, 1327, 1367, 1500
DpnI GATC 8 cut(s) 602, 822, 876, 1106, 1244, 1303, 1396, 1518
DpnII GATC 8 cut(s) 600, 820, 874, 1104, 1242, 1301, 1394, 1516
DrdI GACNNNNNNGTC 2 cut(s) 1279, 1387
DseDI GACNNNNNNGTC 2 cut(s) 1279, 1387
EaeI YGGCCR 1 cut(s) 369
EciI GGCGGA 1 cut(s) 1304
Eco130I CCWWGG 2 cut(s) 366, 591
Eco24I GRGCYC 2 cut(s) 1267, 1388
Eco31I GGTCTC 1 cut(s) 507
Eco57I CTGAAG 1 cut(s) 264
Eco81I CCTNAGG 1 cut(s) 1327
Eco91I GGTNACC 1 cut(s) 251
EcoO65I GGTNACC 1 cut(s) 251
EcoRI GAATTC 1 cut(s) 895
EcoRII CCWGG 2 cut(s) 138, 481
EcoT14I CCWWGG 2 cut(s) 366, 591
EcoT38I GRGCYC 2 cut(s) 1267, 1388
ErhI CCWWGG 2 cut(s) 366, 591
FaeI CATG 6 cut(s) 370, 595, 790, 913, 1094, 1517
FaqI GGGAC 2 cut(s) 1003, 1132
FatI CATG 6 cut(s) 366, 591, 786, 909, 1090, 1513
FblI GTMKAC 2 cut(s) 750, 1131
Fnu4HI GCNGC 3 cut(s) 889, 1158, 1497
FokI GGATG 4 cut(s) 499, 677, 851, 1121
FriOI GRGCYC 2 cut(s) 1267, 1388
Fsp4HI GCNGC 3 cut(s) 889, 1158, 1497
FspBI CTAG 4 cut(s) 6, 206, 344, 818
GlaI GCGC 2 cut(s) 535, 1440
GluI GCNGC 3 cut(s) 889, 1158, 1497
HaeIII GGCC 5 cut(s) 371, 1257, 1332, 1365, 1453
HapII CCGG 3 cut(s) 111, 1015, 1413
HgaI GACGC 2 cut(s) 284, 1266
HhaI GCGC 2 cut(s) 536, 1441
Hin1I GRCGYC 2 cut(s) 1277, 1401
Hin1II CATG 6 cut(s) 370, 595, 790, 913, 1094, 1517
Hin6I GCGC 2 cut(s) 534, 1439
HinP1I GCGC 2 cut(s) 534, 1439
HincII GTYRAC 1 cut(s) 553
HindII GTYRAC 1 cut(s) 553
HinfI GANTC 6 cut(s) 307, 398, 616, 1004, 1409, 1491
HpaII CCGG 3 cut(s) 111, 1015, 1413
HphI GGTGA 5 cut(s) 719, 935, 952, 1038, 1309
Hpy166II GTNNAC 5 cut(s) 553, 751, 950, 1088, 1132
Hpy188I TCNGA 6 cut(s) 26, 221, 1053, 1370, 1380, 1399
Hpy188III TCNNGA 5 cut(s) 282, 395, 402, 1178, 1392
Hpy8I GTNNAC 5 cut(s) 553, 751, 950, 1088, 1132
Hpy99I CGWCG 6 cut(s) 1282, 1285, 1288, 1384, 1403, 1438
HpyAV CCTTC 3 cut(s) 937, 966, 1108
HpyCH4III ACNGT 5 cut(s) 127, 515, 906, 1218, 1376
HpyCH4IV ACGT 2 cut(s) 1401, 1479
HpyCH4V TGCA 6 cut(s) 92, 230, 740, 995, 1160, 1427
HpyF10VI GCNNNNNNNGC 2 cut(s) 377, 1154
HpyF3I CTNAG 5 cut(s) 504, 1050, 1327, 1367, 1500
HpySE526I ACGT 2 cut(s) 1401, 1479
Hsp92I GRCGYC 2 cut(s) 1277, 1401
Hsp92II CATG 6 cut(s) 370, 595, 790, 913, 1094, 1517
HspAI GCGC 2 cut(s) 534, 1439
KspI CCGCGG 1 cut(s) 1141
Kzo9I GATC 8 cut(s) 600, 820, 874, 1104, 1242, 1301, 1394, 1516
LmnI GCTCC 4 cut(s) 885, 1017, 1153, 1262
Lsp1109I GCAGC 2 cut(s) 875, 1144
LweI GCATC 2 cut(s) 217, 1323
MaeI CTAG 4 cut(s) 6, 206, 344, 818
MaeII ACGT 2 cut(s) 1401, 1479
MaeIII GTNAC 6 cut(s) 182, 197, 251, 515, 725, 1406
MalI GATC 8 cut(s) 602, 822, 876, 1106, 1244, 1303, 1396, 1518
MboI GATC 8 cut(s) 600, 820, 874, 1104, 1242, 1301, 1394, 1516
MboII GAAGA 9 cut(s) 72, 166, 281, 470, 843, 856, 1114, 1282, 1350
MfeI CAATTG 1 cut(s) 1021
MflI RGATCY 1 cut(s) 1394
MhlI GDGCHC 3 cut(s) 1150, 1267, 1388
MlsI TGGCCA 1 cut(s) 371
MluCI AATT 8 cut(s) 32, 210, 406, 718, 775, 895, 1021, 1125
MluNI TGGCCA 1 cut(s) 371
MlyI GAGTC 3 cut(s) 392, 1403, 1500
MmeI TCCRAC 4 cut(s) 902, 1220, 1403, 1422
MnlI CCTC 9 cut(s) 6, 51, 623, 794, 1059, 1226, 1285, 1299, 1376
Mox20I TGGCCA 1 cut(s) 371
MscI TGGCCA 1 cut(s) 371
MseI TTAA 6 cut(s) 417, 510, 587, 966, 1250, 1482
Msp20I TGGCCA 1 cut(s) 371
MspA1I CMGCKG 3 cut(s) 149, 1140, 1499
MspI CCGG 3 cut(s) 111, 1015, 1413
MspR9I CCNGG 3 cut(s) 111, 140, 483
MunI CAATTG 1 cut(s) 1021
MvaI CCWGG 2 cut(s) 140, 483
MvnI CGCG 2 cut(s) 534, 1140
MwoI GCNNNNNNNGC 2 cut(s) 377, 1154
NciI CCSGG 1 cut(s) 111
NcoI CCATGG 2 cut(s) 366, 591
NdeII GATC 8 cut(s) 600, 820, 874, 1104, 1242, 1301, 1394, 1516
NlaIII CATG 6 cut(s) 370, 595, 790, 913, 1094, 1517
NlaIV GGNNCC 4 cut(s) 1013, 1256, 1264, 1422
NmuCI GTSAC 3 cut(s) 182, 725, 1406
NspV TTCGAA 1 cut(s) 643
PcsI WCGNNNNNNNCGW 1 cut(s) 1280
PfeI GAWTC 3 cut(s) 307, 616, 1004
PflFI GACNNNGTC 1 cut(s) 1276
PkrI GCNGC 3 cut(s) 890, 1159, 1498
Ple19I CGATCG 1 cut(s) 1304
PleI GAGTC 3 cut(s) 392, 1403, 1499
PpsI GAGTC 3 cut(s) 392, 1403, 1499
Psp1406I AACGTT 1 cut(s) 1479
Psp6I CCWGG 2 cut(s) 138, 481
PspEI GGTNACC 1 cut(s) 251
PspGI CCWGG 2 cut(s) 138, 481
PspN4I GGNNCC 4 cut(s) 1013, 1256, 1264, 1422
PspPI GGNCC 2 cut(s) 1255, 1363
PstI CTGCAG 4 cut(s) 742, 997, 1162, 1429
PsuI RGATCY 1 cut(s) 1394
PsyI GACNNNGTC 1 cut(s) 1276
PvuI CGATCG 1 cut(s) 1304
PvuII CAGCTG 1 cut(s) 149
RsaI GTAC 3 cut(s) 352, 436, 1033
RsaNI GTAC 3 cut(s) 351, 435, 1032
SacII CCGCGG 1 cut(s) 1141
SaqAI TTAA 6 cut(s) 417, 510, 587, 966, 1250, 1482
SatI GCNGC 3 cut(s) 889, 1158, 1497
Sau3AI GATC 8 cut(s) 600, 820, 874, 1104, 1242, 1301, 1394, 1516
Sau96I GGNCC 2 cut(s) 1255, 1363
SchI GAGTC 3 cut(s) 392, 1403, 1500
ScrFI CCNGG 3 cut(s) 111, 140, 483
SduI GDGCHC 3 cut(s) 1150, 1267, 1388
SfaNI GCATC 2 cut(s) 217, 1323
SfcI CTRYAG 4 cut(s) 738, 993, 1158, 1425
Sfr303I CCGCGG 1 cut(s) 1141
SfuI TTCGAA 1 cut(s) 643
SgrBI CCGCGG 1 cut(s) 1141
Sse9I AATT 8 cut(s) 32, 210, 406, 718, 775, 895, 1021, 1125
SsiI CCGC 8 cut(s) 256, 325, 384, 679, 1138, 1140, 1289, 1497
SspMI CTAG 4 cut(s) 6, 206, 344, 818
StyD4I CCNGG 3 cut(s) 109, 138, 481
StyI CCWWGG 2 cut(s) 366, 591
TaaI ACNGT 5 cut(s) 127, 515, 906, 1218, 1376
TaiI ACGT 2 cut(s) 1404, 1482
TaqI TCGA 4 cut(s) 162, 643, 1300, 1304
TaqII GACCGA 1 cut(s) 1335
TasI AATT 8 cut(s) 32, 210, 406, 718, 775, 895, 1021, 1125
TatI WGTACW 2 cut(s) 350, 1031
TauI GCSGC 1 cut(s) 1499
TfiI GAWTC 3 cut(s) 307, 616, 1004
Tru1I TTAA 6 cut(s) 417, 510, 587, 966, 1250, 1482
Tru9I TTAA 6 cut(s) 417, 510, 587, 966, 1250, 1482
TscAI CASTG 5 cut(s) 742, 957, 1221, 1411, 1473
TseFI GTSAC 3 cut(s) 182, 725, 1406
TseI GCWGC 2 cut(s) 888, 1157
Tsp45I GTSAC 3 cut(s) 182, 725, 1406
TspDTI ATGAA 4 cut(s) 43, 72, 503, 759
TspGWI ACGGA 1 cut(s) 1503
TspRI CASTG 5 cut(s) 742, 957, 1221, 1411, 1473
Tth111I GACNNNGTC 1 cut(s) 1276
XapI RAATTY 3 cut(s) 210, 406, 895
XmiI GTMKAC 2 cut(s) 750, 1131
XspI CTAG 4 cut(s) 6, 206, 344, 818
ZraI GACGTC 1 cut(s) 1402
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.