FvH4_5g25380

histone-lysine N-methyltransferase, H3 lysine-9 specific

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
Physical Location & Seq
Forward (+)
16904022 .. 16907755
3734 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g25380.t1

Sequence Viewer

Length: 3126 bp
ATGGACGTTGGTGAGTGTTCTTACAGCCCCAGTTCGGGTAAGATTAAGAGGCGACTTGTCTCTGCTGTTCGTGATTTTCCACCCGGTTGTGGAAGAAATGTTCTCTTAAACAATGGTGTTGCTGGTACTTCTAGGACTGGACCAATGGAGGGTAGCAGTGAACTGGAAGCCTCTGTTGGTGCTTCTCAGAGTGTACCGACTGAAAATTCGGTTGCTGGGGATAGGATCAATGATGGGAATGAAGTAGATGATAGTGACATGATGAGTGTGCCAGTTGAAACTAGAACATCGTTAGAAGATGAAGTATCTGATTTGCAGGCGAATCTGTGTCAGTTGAGCAACAATTCAACAATTGTTGAAGGGGCAAGTCCTGTTGGTACTACTGATCAGGCTGAGCAGTTGATTAGGAGGGATAGAAATGATGATGGACAAAAAGCTGTAAGCATGATCCTCTCAGCTGGTCAGGTGGGTGGCGATTCTGACTTAATGAATAGGGCTGTTGTTGGTACTGTGGAAACAGATGAATTAACAGCCTTAGACCATGAAGGATCTGATTTGTCACTAAACCCTTATCTAGTGCGTATGGCTACACAGGATGTACAGATGGTTTCTGTGATGTCAGATCAAAACTCTGCTTCCATTTCCGTTTCTAATAGTGGTCAGGAGAAGAATGCAGCTAGAAGATATCCTCCTCGAAGACATGTCTCAGCTGTTCGGGACTTCCCTCCTTTTTGTAGAAGGAATGCTGCCTTGGAGGCCAGAAATTTCAGTGAAGAGCAGTCGGATATGGGTGACAAGCCATCCTCATCAAAGATGAATACCATTATGCAACAAGCAGGAGTGGGTGATGTTCGGGAGGAAGAGTTCCACAAGAATGAATTGGGAGGGAATGATTATGAAGTAACTGGGGACGGAGTTCAAACTGAACGCAAGGGACATGATGTAGAAGAAATGGAGAGAAAAGATGAATGCAACAATGGGATGAAGTTGGTTTTGGAAGATACAAGAAAAAATGAGATTGTACCTTCTCAAGAAGAAAGCAATGAATGTAAAGGGACAAGGGAGGATGGTATACATTCAGAGAAGAAAGTGGGGAAGCAGATTGTGGTATACCATGAGAAGAACAGTCCAGGAGGAAATATCCAAGAAGATAGGGTGATTGTAATGGGTTTGATGGCTGCATCAAATTGTCCATGGCTGAAGGCAATAGAGGTGGAGGAACCTAAACCAAATGGTGGCATGAGTGAAGGCAAACAGAAGAAACCATATGGTATGAGTGGAAGCAAACGGAAGAAACCAGATGGTATGAGTGAAAGAAAACAGAAGAAACCAAGTGCTGGTGTTAGTGAAAGTAAACAGAAAACACTTCATTTTGAATGTCAGCCAGAAGGATCTAACACTACTCCTAGGACTAAAAGTGACTCGAAGATTGGGCGAAAGCCTAGAAAGACAAATGGTGCAGGAGCAAGAGAGACTGCTAATCAAGGCACGAGCCAGCAACTTGTTATTAGGGGCGAGGATGCGGTTCCAATATCATGTTATACACATGTGTCACATGTGTGCCCTCCTCCTTTTTGTCAGAGTAGTTCAAGCAATGAAGTTTGTGATGGTGGTGCAATTGTGACCCGAAACAAGGTGAGGGAGACATTGCGGCTTTTTCAAGCTGTTTCTAGGAAGCTCTTGCAGGAGGATGAAGCTAAGTCAAAGGAAGGAGGAACCTCCCGCAAAAGGTATGATCTTCAAGCAGCAAAGATCCTAAAGGAAAAAGGAAAATATGTAAATGTAGGCAAACAAATCTTGGGAGCTGTTCCTGGAGTGGAAGTTGGTGATGAGTTTCATTACAGAGTGGAACTTCTTATGATTGGCCTACATCGCCAAATTCAAGGTGGTATAGATTATGTTAAGCATGGGGGGAAGATCCTTGCAACCAGTATTGTTGCATCAGGGGGGTATGCTGATGCTTTGGATGATTCAAATTCCTTGATTTACACTGGCCAAGGAGGAAATATGATAAATACAGAAAAGGAACCTGAAGATCAGAAGCTTGAACGTGGCAACCTTGCTTTGAAGAATAGTCTGGATGAAAAGAATCCTGTTAGAGTGATCCGTGGGTCTGAATCATCAGATGGAAAATCTAGGACATATGTGTATGATGGACTATATTTGGTAGAGAAATGTTGGCAACATTTGGGGCCTCATAATAAGCTTGTATACAAGTTTCATCTGGACAGAATTGCGGGTCAACCAGAGCTTGCTTGGAAAGAGCTTAAGAAGTCCAAAAAATTTCAAGTACGTGAAGGTATCTGTGTTGATGATATTTCAGGTGGCAAAGAGTCCATTCCTATCTGTGCTGTGAATACCATAGACGATGAAAAGCCTCCATCCTTTGAATACATAACTAGCATGATATATCCTTATTGGTGCCGCCCACTTCCTCTCTTGGGTTGTAGCTGTACTGCTGCATGCTCAGACTCAGAGAAATGTTCTTGTGCAGTTAAGAATAGAGGTGAGATCCCATATAACTTTAACGGGGCTATTGTTGAAGCTAAACCCCTTGTGTACGAGTGTGGACCTACTTGCAAATGTCCTCCTTCTTGCCATAATAGAGTAAGCCAGCATGGTATAAAATTTCAGCTTGAAATTTTTAAAACTAAATCAAGGGGATGGGGGGTGAGATCCCTTAATTCCATTCCTTCAGGAAAGTTTATTTGTGAGTACATAGGAGAGCTCCTTGAGGAGAAGGAAGCCGAAGCAAGAGCTGGTAATGATGAGTATCTGTTTGATATTGGGAATAACTACAACGACAATCTTTGGGATGGGCTTTCGTCCCTCATGCCCGATGCACACTCAAGTTCTTACGAAGTTGTAGAGGAAGGTTGTTTCACCATTGATGCTGCGAGCAAAGGCAATTTGGGGAGATTTATCAACCATAGCTGTTCCCCTAATCTTTATGCACAAAATGTCCTCTATGATCACGAAGACAACAGAATTCCTCACATTATGTTCTTCGCCGCTGAGAACATTCCTCCTTTGCAAGAAGTGCACTGGCCGGCTGTATTGAGGCAGTTTGAAGCAGCCAAGTCACATTCAATTTTCAATTTAGAAGGATTTGACTGTGGCTTTTGA

Protein Analysis

1042

Amino Acids

114.41

Weight (kDa)

5.63

Isoelectric Point (pI)

44.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SAD_SRA PF02182 600 - 748 4.4e-53 SAD/SRA domain
Pre-SET PF05033 775 - 869 1.5e-22 Pre-SET motif
SET PF00856 888 - 1014 2e-19 SET domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000355)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G22740 AT2G22740 AT2G35160 AT2G35160 AT2G35160 AT2G35160 AT2G35160
fragaria_vesca FvH4_5g20100 FvH4_5g20130 FvH4_5g20130 FvH4_5g20130 FvH4_5g20130 FvH4_5g20130 FvH4_5g20150 FvH4_5g25380 FvH4_5g30731 FvH4_5g30740
malus_domestica MD03G1258900.v1.1 MD04G1052400.v1.1 MD11G1279700.v1.1
prunus_persica Prupe.2G064400_v2.0.a1 Prupe.5G057000_v2.0.a1 Prupe.5G057400_v2.0.a1
pyrus_communis pycom03g20690 pycom04g04620 pycom11g24730
rosa_chinensis RchiOBHm_Chr7g0204991 RchiOBHm_Chr7g0205081 RchiOBHm_Chr7g0205121 RchiOBHm_Chr7g0205131 RchiOBHm_Chr7g0215601 RchiOBHm_Chr7g0225631
rosa_laevigata RLG00000001799 RLG00000002623 RLG00000002644 RLG00000003398 RLG00000003403 RLG00000003417 RLG00000034641
rosa_multiflora Rmu_co8235369.1_g000001 Rmu_co8353775.1_g000001 Rmu_co8458607.1_g000001 Rmu_sc0000898.1_g000043 Rmu_sc0000898.1_g000048 Rmu_sc0001072.1_g000001 Rmu_sc0001072.1_g000002 Rmu_sc0003876.1_g000010 Rmu_sc0005112.1_g000021 Rmu_sc0007602.1_g000010 Rmu_sc0009349.1_g000014 Rmu_sc0020855.1_g000001 Rmu_sc0023402.1_g000001 Rmu_sc0024226.1_g000004
rosa_roxburghii Rroxscaffold_3G00233620 Rroxscaffold_3G00244060 Rroxscaffold_3G00252560 Rroxscaffold_3G00252590 Rroxscaffold_3G00252620
rosa_rugosa Rorug07G0086900 Rorug07G0087000 Rorug07G0087000 Rorug07G0087400 Rorug07G0087500 Rorug07G0087600 Rorug07G0087700 Rorug07G0087800 Rorug07G0088100 Rorug07G0095600.1 Rorug07G0095700.1 Rorug07G0095800.1 Rorug07G0095900 Rorug07G0096000 Rorug07G0096100 Rorug07G0155000 Rorug07G0232100
rosa_samantha Rh7AG217900 Rh7AG218400 Rh7AG219000 Rh7AG291200 Rh7AG371700 Rh7BG214800 Rh7BG215000 Rh7BG215500 Rh7BG223800 Rh7BG224400 Rh7BG283300 Rh7BG283800 Rh7BG366000 Rh7CG231100 Rh7CG231600 Rh7CG232000 Rh7CG241100 Rh7CG311200 Rh7CG390400 Rh7DG225200 Rh7DG225900 Rh7DG226400 Rh7DG295000 Rh7DG376800
rosa_wichuraiana Rw0G004730 Rw7G018880 Rw7G018900 Rw7G018920 Rw7G018940 Rw7G018960 Rw7G024860 Rw7G031790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 2421
AccB7I CCANNNNNTGG 2 cut(s) 1235, 1337
AccI GTMKAC 3 cut(s) 1072, 1110, 2211
AciI CCGC 6 cut(s) 1523, 1651, 1723, 2237, 2425, 3012
AclWI GGATC 9 cut(s) 233, 442, 556, 1399, 1747, 1912, 2098, 2506, 2670
AcoI YGGCCR 2 cut(s) 1993, 3047
AcsI RAATTY 8 cut(s) 205, 763, 1878, 1975, 2282, 2627, 2640, 2988
AcuI CTGAAG 3 cut(s) 1220, 2052, 2679
AfiI CCNNNNNNNGG 9 cut(s) 34, 35, 89, 149, 1235, 1337, 1633, 1728, 2441
AflII CTTAAG 1 cut(s) 2267
AflIII ACRYGT 3 cut(s) 700, 1546, 1555
AjnI CCWGG 2 cut(s) 1129, 1810
AjuI GAANNNNNNNTTGG 6 cut(s) 159, 191, 734, 766, 977, 1009
AleI CACNNNNGTG 1 cut(s) 1558
AloI GAACNNNNNNTCC 4 cut(s) 84, 116, 848, 880
Alw21I GWGCWC 2 cut(s) 2730, 3045
Alw26I GTCTC 4 cut(s) 64, 709, 1466, 1637
Alw44I GTGCAC 1 cut(s) 3041
AlwI GGATC 9 cut(s) 233, 442, 556, 1399, 1747, 1912, 2098, 2506, 2670
AoxI GGCC 5 cut(s) 756, 1864, 1993, 2192, 3047
ApaLI GTGCAC 1 cut(s) 3041
ApeKI GCWGC 7 cut(s) 674, 746, 1178, 1745, 2459, 2894, 3074
ApoI RAATTY 8 cut(s) 205, 763, 1878, 1975, 2282, 2627, 2640, 2988
ArsI GACNNNNNNTTYG 2 cut(s) 190, 222
AspA2I CCTAGG 1 cut(s) 1406
AspS9I GGNCC 3 cut(s) 140, 2192, 2570
AsuC2I CCSGG 1 cut(s) 84
AsuHPI GGTGA 9 cut(s) 23, 803, 857, 1168, 1648, 1838, 2519, 2683, 2875
AvaII GGWCC 2 cut(s) 140, 2570
AvrII CCTAGG 1 cut(s) 1406
BaeGI GKGCMC 2 cut(s) 1565, 3045
BalI TGGCCA 1 cut(s) 1995
BanI GGYRCC 1 cut(s) 2421
BanII GRGCYC 1 cut(s) 2730
BauI CACGAG 1 cut(s) 1489
BbsI GAAGAC 2 cut(s) 703, 2985
Bbv12I GWGCWC 2 cut(s) 2730, 3045
BbvI GCAGC 7 cut(s) 686, 733, 1165, 1757, 2446, 2881, 3086
BciT130I CCWGG 2 cut(s) 1131, 1812
BclI TGATCA 2 cut(s) 385, 2971
BcnI CCSGG 1 cut(s) 84
BcoDI GTCTC 4 cut(s) 64, 709, 1466, 1637
BfaI CTAG 9 cut(s) 132, 282, 575, 678, 1407, 1443, 1671, 2136, 2400
BfrI CTTAAG 1 cut(s) 2267
BglI GCCNNNNNGGC 1 cut(s) 755
BlnI CCTAGG 1 cut(s) 1406
BlpI GCTNAGC 1 cut(s) 393
Bme1390I CCNGG 3 cut(s) 84, 1131, 1812
Bme18I GGWCC 2 cut(s) 140, 2570
BmgT120I GGNCC 3 cut(s) 140, 2192, 2570
BmiI GGNNCC 6 cut(s) 1221, 1527, 1717, 2028, 2193, 2423
BmrFI CCNGG 3 cut(s) 84, 1131, 1812
BmrI ACTGGG 2 cut(s) 24, 915
BmsI GCATC 6 cut(s) 1190, 1510, 1948, 1949, 2830, 2881
BmuI ACTGGG 2 cut(s) 24, 915
BpiI GAAGAC 2 cut(s) 703, 2985
BpmI CTGGAG 1 cut(s) 1833
Bpu1102I GCTNAGC 1 cut(s) 393
BpuEI CTTGAG 3 cut(s) 1014, 2753, 2833
BpuMI CCSGG 1 cut(s) 84
BsaAI YACGTR 1 cut(s) 2294
BsaBI GATNNNNATC 1 cut(s) 2772
BsaJI CCNNGG 5 cut(s) 750, 1193, 1406, 1996, 2107
BsaXI ACNNNNNCTCC 4 cut(s) 848, 878, 1806, 1836
Bsc4I CCNNNNNNNGG 9 cut(s) 34, 35, 89, 149, 1235, 1337, 1633, 1728, 2441
Bse118I RCCGGY 1 cut(s) 3049
Bse1I ACTGG 8 cut(s) 30, 142, 168, 272, 910, 1929, 1996, 3050
Bse3DI GCAATG 3 cut(s) 1048, 1600, 1646
Bse8I GATNNNNATC 1 cut(s) 2772
BseBI CCWGG 2 cut(s) 1131, 1812
BseDI CCNNGG 5 cut(s) 750, 1193, 1406, 1996, 2107
BseJI GATNNNNATC 1 cut(s) 2772
BseLI CCNNNNNNNGG 9 cut(s) 34, 35, 89, 149, 1235, 1337, 1633, 1728, 2441
BseMI GCAATG 3 cut(s) 1048, 1600, 1646
BseMII CTCAG 7 cut(s) 200, 384, 468, 720, 2481, 2487, 3006
BseNI ACTGG 8 cut(s) 30, 142, 168, 272, 910, 1929, 1996, 3050
BseRI GAGGAG 3 cut(s) 681, 1557, 2750
BseSI GKGCMC 2 cut(s) 1565, 3045
BseXI GCAGC 7 cut(s) 686, 733, 1165, 1757, 2446, 2881, 3086
BseYI CCCAGC 1 cut(s) 215
BsgI GTGCAG 2 cut(s) 1479, 2511
BshFI GGCC 5 cut(s) 758, 1866, 1995, 2194, 3049
BshNI GGYRCC 1 cut(s) 2421
BsiHKAI GWGCWC 2 cut(s) 2730, 3045
BsiSI CCGG 2 cut(s) 84, 3050
BslFI GGGAC 5 cut(s) 731, 923, 948, 1069, 2812
BslI CCNNNNNNNGG 9 cut(s) 34, 35, 89, 149, 1235, 1337, 1633, 1728, 2441
BsmAI GTCTC 4 cut(s) 64, 709, 1466, 1637
BsmFI GGGAC 5 cut(s) 731, 923, 948, 1069, 2812
BsmI GAATGC 3 cut(s) 676, 748, 974
BsnI GGCC 5 cut(s) 758, 1866, 1995, 2194, 3049
Bsp1286I GDGCHC 3 cut(s) 1565, 2730, 3045
Bsp1407I TGTACA 1 cut(s) 598
Bsp1720I GCTNAGC 1 cut(s) 393
Bsp19I CCATGG 1 cut(s) 1193
BspACI CCGC 6 cut(s) 1523, 1651, 1723, 2237, 2425, 3012
BspANI GGCC 5 cut(s) 758, 1866, 1995, 2194, 3049
BspCNI CTCAG 7 cut(s) 199, 385, 467, 719, 2480, 2486, 3007
BspLI GGNNCC 6 cut(s) 1221, 1527, 1717, 2028, 2193, 2423
BspPI GGATC 9 cut(s) 233, 442, 556, 1399, 1747, 1912, 2098, 2506, 2670
BspQI GCTCTTC 1 cut(s) 768
BspT107I GGYRCC 1 cut(s) 2421
BspTI CTTAAG 1 cut(s) 2267
BsrDI GCAATG 3 cut(s) 1048, 1600, 1646
BsrFI RCCGGY 1 cut(s) 3049
BsrGI TGTACA 1 cut(s) 598
BsrI ACTGG 8 cut(s) 30, 142, 168, 272, 910, 1929, 1996, 3050
BssAI RCCGGY 1 cut(s) 3049
BssECI CCNNGG 5 cut(s) 750, 1193, 1406, 1996, 2107
BssNAI GTATAC 3 cut(s) 1073, 1111, 2212
BssSI CACGAG 1 cut(s) 1489
BssT1I CCWWGG 4 cut(s) 750, 1193, 1406, 1996
Bst1107I GTATAC 3 cut(s) 1073, 1111, 2212
Bst2BI CACGAG 1 cut(s) 1489
Bst2UI CCWGG 2 cut(s) 1131, 1812
Bst4CI ACNGT 3 cut(s) 511, 1127, 3116
Bst6I CTCTTC 2 cut(s) 768, 855
BstAFI CTTAAG 1 cut(s) 2267
BstAPI GCANNNNNTGC 1 cut(s) 3040
BstAUI TGTACA 1 cut(s) 598
BstBAI YACGTR 1 cut(s) 2294
BstC8I GCNNGC 7 cut(s) 318, 1496, 2253, 2464, 2615, 2899, 3051
BstDEI CTNAG 9 cut(s) 186, 393, 454, 535, 706, 1698, 2467, 2473, 3015
BstDSI CCRYGG 2 cut(s) 1193, 2107
BstMAI GTCTC 4 cut(s) 64, 709, 1466, 1637
BstMWI GCNNNNNNNGC 3 cut(s) 755, 1872, 3040
BstNI CCWGG 2 cut(s) 1131, 1812
BstNSI RCATGY 4 cut(s) 704, 1550, 1559, 2466
BstSCI CCNGG 3 cut(s) 82, 1129, 1810
BstSLI GKGCMC 2 cut(s) 1565, 3045
BstV1I GCAGC 7 cut(s) 686, 733, 1165, 1757, 2446, 2881, 3086
BstV2I GAAGAC 2 cut(s) 703, 2985
BstX2I RGATCY 6 cut(s) 548, 1391, 1752, 1917, 2511, 2675
BstYI RGATCY 6 cut(s) 548, 1391, 1752, 1917, 2511, 2675
BstZ17I GTATAC 3 cut(s) 1073, 1111, 2212
BsuRI GGCC 5 cut(s) 758, 1866, 1995, 2194, 3049
BtgI CCRYGG 2 cut(s) 1193, 2107
BtgZI GCGATG 1 cut(s) 1856
BtsI GCAGTG 1 cut(s) 163
BtsIMutI CAGTG 4 cut(s) 163, 775, 1989, 3043
Cac8I GCNNGC 7 cut(s) 318, 1496, 2253, 2464, 2615, 2899, 3051
Cfr10I RCCGGY 1 cut(s) 3049
Cfr13I GGNCC 3 cut(s) 140, 2192, 2570
CspCI CAANNNNNGTGG 2 cut(s) 1194, 1229
DdeI CTNAG 9 cut(s) 186, 393, 454, 535, 706, 1698, 2467, 2473, 3015
DraI TTTAAA 1 cut(s) 2647
EaeI YGGCCR 2 cut(s) 1993, 3047
Eam1104I CTCTTC 2 cut(s) 768, 855
EarI CTCTTC 2 cut(s) 768, 855
Ecl136II GAGCTC 1 cut(s) 2728
Eco130I CCWWGG 4 cut(s) 750, 1193, 1406, 1996
Eco24I GRGCYC 1 cut(s) 2730
Eco32I GATATC 1 cut(s) 686
Eco47I GGWCC 2 cut(s) 140, 2570
Eco53kI GAGCTC 1 cut(s) 2728
Eco57I CTGAAG 3 cut(s) 1220, 2052, 2679
EcoICRI GAGCTC 1 cut(s) 2728
EcoO109I RGGNCCY 1 cut(s) 2192
EcoRI GAATTC 1 cut(s) 2988
EcoRII CCWGG 2 cut(s) 1129, 1810
EcoRV GATATC 1 cut(s) 686
EcoT14I CCWWGG 4 cut(s) 750, 1193, 1406, 1996
EcoT38I GRGCYC 1 cut(s) 2730
ErhI CCWWGG 4 cut(s) 750, 1193, 1406, 1996
FaqI GGGAC 5 cut(s) 731, 923, 948, 1069, 2812
FauI CCCGC 2 cut(s) 1730, 2230
FauNDI CATATG 2 cut(s) 1267, 2143
FbaI TGATCA 2 cut(s) 385, 2971
FblI GTMKAC 3 cut(s) 1072, 1110, 2211
FriOI GRGCYC 1 cut(s) 2730
FspBI CTAG 9 cut(s) 132, 282, 575, 678, 1407, 1443, 1671, 2136, 2400
GsaI CCCAGC 1 cut(s) 219
GsuI CTGGAG 1 cut(s) 1833
HaeIII GGCC 5 cut(s) 758, 1866, 1995, 2194, 3049
HapII CCGG 2 cut(s) 84, 3050
HincII GTYRAC 1 cut(s) 2243
HindII GTYRAC 1 cut(s) 2243
HindIII AAGCTT 2 cut(s) 2042, 2204
HinfI GANTC 8 cut(s) 322, 476, 1421, 1970, 2089, 2117, 2333, 2471
HpaII CCGG 2 cut(s) 84, 3050
HphI GGTGA 9 cut(s) 23, 803, 857, 1168, 1648, 1838, 2519, 2683, 2875
Hpy188III TCNNGA 9 cut(s) 71, 662, 716, 854, 1031, 2078, 2225, 2697, 2975
HpyCH4III ACNGT 3 cut(s) 511, 1127, 3116
HpyCH4IV ACGT 3 cut(s) 6, 2050, 2293
HpyF10VI GCNNNNNNNGC 3 cut(s) 755, 1872, 3040
HpyF3I CTNAG 9 cut(s) 186, 393, 454, 535, 706, 1698, 2467, 2473, 3015
HpySE526I ACGT 3 cut(s) 6, 2050, 2293
KroI GCCGGC 1 cut(s) 3049
KroNI GCCGGC 1 cut(s) 3051
Ksp22I TGATCA 2 cut(s) 385, 2971
LguI GCTCTTC 1 cut(s) 768
LmnI GCTCC 3 cut(s) 1463, 1802, 2733
Lsp1109I GCAGC 7 cut(s) 686, 733, 1165, 1757, 2446, 2881, 3086
LweI GCATC 6 cut(s) 1190, 1510, 1948, 1949, 2830, 2881
MaeI CTAG 9 cut(s) 132, 282, 575, 678, 1407, 1443, 1671, 2136, 2400
MaeII ACGT 3 cut(s) 6, 2050, 2293
MaeIII GTNAC 8 cut(s) 254, 558, 791, 901, 1418, 1551, 1621, 3081
MfeI CAATTG 2 cut(s) 351, 1617
MflI RGATCY 6 cut(s) 548, 1391, 1752, 1917, 2511, 2675
MhlI GDGCHC 3 cut(s) 1565, 2730, 3045
MlsI TGGCCA 1 cut(s) 1995
MluNI TGGCCA 1 cut(s) 1995
MlyI GAGTC 3 cut(s) 1415, 2342, 2465
MmeI TCCRAC 1 cut(s) 762
Mox20I TGGCCA 1 cut(s) 1995
MroNI GCCGGC 1 cut(s) 3049
MscI TGGCCA 1 cut(s) 1995
MslI CAYNNNNRTG 2 cut(s) 873, 1558
Msp20I TGGCCA 1 cut(s) 1995
MspA1I CMGCKG 3 cut(s) 458, 710, 3014
MspCI CTTAAG 1 cut(s) 2267
MspI CCGG 2 cut(s) 84, 3050
MspR9I CCNGG 3 cut(s) 84, 1131, 1812
MunI CAATTG 2 cut(s) 351, 1617
Mva1269I GAATGC 3 cut(s) 676, 748, 974
MvaI CCWGG 2 cut(s) 1131, 1812
MwoI GCNNNNNNNGC 3 cut(s) 755, 1872, 3040
NaeI GCCGGC 1 cut(s) 3051
NciI CCSGG 1 cut(s) 84
NcoI CCATGG 1 cut(s) 1193
NdeI CATATG 2 cut(s) 1267, 2143
NgoMIV GCCGGC 1 cut(s) 3049
NlaIV GGNNCC 6 cut(s) 1221, 1527, 1717, 2028, 2193, 2423
NmuCI GTSAC 7 cut(s) 254, 558, 791, 1418, 1551, 1621, 3081
NspI RCATGY 4 cut(s) 704, 1550, 1559, 2466
OliI CACNNNNGTG 1 cut(s) 1558
PaeI GCATGC 1 cut(s) 2466
PciI ACATGT 3 cut(s) 700, 1546, 1555
PciSI GCTCTTC 1 cut(s) 768
PctI GAATGC 3 cut(s) 676, 748, 974
PdiI GCCGGC 1 cut(s) 3051
PfeI GAWTC 5 cut(s) 322, 476, 1970, 2089, 2117
PflMI CCANNNNNTGG 2 cut(s) 1235, 1337
PfoI TCCNGGA 2 cut(s) 1129, 1810
PleI GAGTC 3 cut(s) 1415, 2341, 2465
PpsI GAGTC 3 cut(s) 1415, 2341, 2465
Ppu21I YACGTR 1 cut(s) 2294
PscI ACATGT 3 cut(s) 700, 1546, 1555
Psp124BI GAGCTC 1 cut(s) 2730
Psp6I CCWGG 2 cut(s) 1129, 1810
PspFI CCCAGC 1 cut(s) 215
PspGI CCWGG 2 cut(s) 1129, 1810
PspN4I GGNNCC 6 cut(s) 1221, 1527, 1717, 2028, 2193, 2423
PspPI GGNCC 3 cut(s) 140, 2192, 2570
PsuI RGATCY 6 cut(s) 548, 1391, 1752, 1917, 2511, 2675
PvuII CAGCTG 2 cut(s) 458, 710
RseI CAYNNNNRTG 2 cut(s) 873, 1558
SacI GAGCTC 1 cut(s) 2730
SapI GCTCTTC 1 cut(s) 768
Sau96I GGNCC 3 cut(s) 140, 2192, 2570
SchI GAGTC 3 cut(s) 1415, 2342, 2465
ScrFI CCNGG 3 cut(s) 84, 1131, 1812
SduI GDGCHC 3 cut(s) 1565, 2730, 3045
SfaNI GCATC 6 cut(s) 1190, 1510, 1948, 1949, 2830, 2881
SinI GGWCC 2 cut(s) 140, 2570
SmiMI CAYNNNNRTG 2 cut(s) 873, 1558
SmlI CTYRAG 4 cut(s) 1029, 2267, 2732, 2848
SmoI CTYRAG 4 cut(s) 1029, 2267, 2732, 2848
SphI GCATGC 1 cut(s) 2466
SsiI CCGC 6 cut(s) 1523, 1651, 1723, 2237, 2425, 3012
SspMI CTAG 9 cut(s) 132, 282, 575, 678, 1407, 1443, 1671, 2136, 2400
SstI GAGCTC 1 cut(s) 2730
StyD4I CCNGG 3 cut(s) 82, 1129, 1810
StyI CCWWGG 4 cut(s) 750, 1193, 1406, 1996
TaaI ACNGT 3 cut(s) 511, 1127, 3116
TaiI ACGT 3 cut(s) 9, 2053, 2296
TaqI TCGA 2 cut(s) 694, 1424
TatI WGTACW 3 cut(s) 598, 2453, 2715
TauI GCSGC 3 cut(s) 1654, 2427, 3014
TfiI GAWTC 5 cut(s) 322, 476, 1970, 2089, 2117
TscAI CASTG 4 cut(s) 163, 775, 1996, 3050
TseFI GTSAC 7 cut(s) 254, 558, 791, 1418, 1551, 1621, 3081
TseI GCWGC 7 cut(s) 674, 746, 1178, 1745, 2459, 2894, 3074
Tsp45I GTSAC 7 cut(s) 254, 558, 791, 1418, 1551, 1621, 3081
TspGWI ACGGA 4 cut(s) 634, 927, 1303, 2096
TspRI CASTG 4 cut(s) 163, 775, 1996, 3050
Van91I CCANNNNNTGG 2 cut(s) 1235, 1337
Vha464I CTTAAG 1 cut(s) 2267
VneI GTGCAC 1 cut(s) 3041
VpaK11BI GGWCC 2 cut(s) 140, 2570
XapI RAATTY 8 cut(s) 205, 763, 1878, 1975, 2282, 2627, 2640, 2988
XceI RCATGY 4 cut(s) 704, 1550, 1559, 2466
XcmI CCANNNNNNNNNTGG 2 cut(s) 1883, 2253
XmaJI CCTAGG 1 cut(s) 1406
XmiI GTMKAC 3 cut(s) 1072, 1110, 2211
XspI CTAG 9 cut(s) 132, 282, 575, 678, 1407, 1443, 1671, 2136, 2400
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.