Rh7AG291200

histone-lysine N-methyltransferase, H3 lysine-9 specific

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
Physical Location & Seq
Forward (+)
31608265 .. 31611393
3129 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG291200.1

Sequence Viewer

Length: 3129 bp
ATGGGGGTTGTAGAGGCGAACCCGCATCTGGACTCATCATCTAGGACAGTAGCATCGCTTAATGGCAGTCATTCTGAAGCAAGATTAGGCAAGAAGCCAATGGAAGTTGGTGAGTGTTCTTACCGCCCCAGTTCGGCTAAGATTAAGAGGCGAATAGTCTCTGCTGTTCGTGATTTTCCGCCGGGTTGTGGAAGAAATGTTCCCTTAAACAATGCCATTGCTGGTACTTCTCAGAATGTACCAATAGAGGGTGCCAGTGAATTGGAAGCTTTTGCTGGTGCTTCTCAGAGTGTACCGATAGAAAACTCGGTTGCTGGGGATAGAATTGATGATGGAAATGAAGTGGATGATAGTGGCTTGATGAATATGGAGCCAGTTGTGAGAGGAACAGCCTTAGAAGATGAAGTATTTGATTTGCGGGAGAATCCGCATCAGTTAAGCAACAATTTGACAATTGTTGAAGGGGCAGGTCCTGTTGGTACTAATGATCAGGCTGAGAAGTTGATTAGCGGGGATAGAACTGATGACGGACAAAAAGTTGTAAACTTGATCCTCTCAGCTGGTCAGGTGGGTGGTGATTCTGACTTGATGAATAGGGCTGTTGGTACTGTGGAAACAGTTGAATTAACAGCCCTAGAGCATGGAGTATCTGATTTGTCAAAGAACCCTCATCTGGTGTGTGTGGCTACACCGGATGAAGTGATGGTTCCTATGCTGTCAAATAGAAACTCTTCTTCCATTTCAGTTTCTAATGTCAATGGTCAGGAAAAGACTGCAGCTAGAAGATATCCTCCTCGAAGACATGTCTCAGCTGTTCGGGACTTCCCTCCTTTTTGCGGAAGGAATGCTGCCACGGAGGCCAGGAATTTTGGTGAAGGGCAGTCGGATATGGGTGACAAACCATCTTCATCAAATATGAATACCATCATGCAACAAGCCAGAGAGGATGATGTTCAGGAGGAAGAGTTTCACGAGAATAAATTGGGAGGGAATGTTTCTGAAGTAACTGGAGGTGGAGTTCAAACTGAATACAAGGGACATGCCGTAGAAGAAATGGAGAGAAAAGATCAATGCATAGTATATTCTGGGATCAATGAGGTTTTGGAAGATACAAGAAAAGATGACACTGAACCTCAAGAAAGCAATGGATGTCAAGGGACAAGGGAGGATGTTGAACATTCAGAGAAGAAAGTGGGGAAGCAGATTGTGGTATACCATGAGAAGAACAGTCGAGGGCGAAATAGTCAAAAAAGTAGGGTGATTGTACTGGGTTTGATGGCTGCATCAAATTGTGGTATGAGTGAAAGCAAACAGAAGAAACCAGATGGTGGTATGAGTGGAAGAAAACGGAAGAAAACAGATGGTATGAGTGAAAGAAAACAGAAGAAACCAGGTGGTGGTGTAAGTGAATGCAAACTGAAAACACCTGATTTTAAATGTGAGTCAGAAGGATCTAATTCTACTCCCCAAGGTACAAGCCTGCAGCTTGTTATTAGGGATGAGGATGTGATTCCAATATCATGTTATACACATGTGTGCCCTCCTCCTTTTGGTCAGAGTAGTTCAAGCAATGAAGTTCGTGATGATGGTGCAATTGTCACCCGAAACAAGGTGAGGGAGACATTGCGGCTTTTTCAAGCTGTTTATAGGAAGCTCTTGCAGGAGGATGAAGCGAAGTCAAAGGAAGGAGGCAACTCCCGCAGAAGGTTTGATCTTCAAGCAGCAAAGATCCTCAAGGAAAAAGGAAAATACGTAAATCTTGGCAAACAAATCTTGGGAGCTGTTCCAGGAGTGGAAGTCGGTGATGAGTTTCATTATAGAGTGGAACTTAATATGATTGGCCTACACCGCCAAATTCAAGGTGGTATAGATTATGTTAGGCATGGGGGGACAATCCTTGCTACCAGTATTGTTGCATCAGGGGGGTATGCTGATGCTTTGGATAATTCAAGTTCCTTGATTTATACGGGCCAAGGAGGAAATGTGATAAATACAGAAAAGGAACCTGAAGATCAGAAGCTTGAACGGGGAAACCTTGCTTTGAAGAATAGTCTGCATGAAAAGAATCCTGTTAGAGTGATTCGTGGGTCTGAATCATCAGATGGAAAATCTAGGACATATGTCTATGACGGGCTATATTTGGTAGAGAAATGTTGGCAAGATTTGGGGCCTCATAATAAGCTGGTTTATAAGTTTCAGCTGGACAGAATTGGGGGTCAACCAGAGCTTGCTTGGAAAGAACTGAAGAAGTCCAAAAAATTTCAAATACGTGAAGGTATCTGTGTCGATGATATTTCAGGAGGCAAAGAGTCAATTCCTATCTGTGCTATGAATACCATAGACGATGAGAAACCTCCATCATTCGAATACATAACTAGTGTGATATATCCTGATTGGTGCCGCCCGCTTCCTCCCAAGGGTTGTAGCTGTACTGCTGGATGCTCGGACTCTGAGAAATGTTCTTGTGCAGTTAAGAATGGAGGTGAGATCCCATTTAACTTTAATGGGGCTATTGTTGAAGCTAAGCCCCTTGTGTATGAGTGTGGTCCTTCTTGCAAGTGTCCTCCTTCTTGCCATAATAGAGTTAGCCAGTATGGTATCAAGTTTCACCTTGAAATTTTTAAAACTAAATCAATGGGATGGGGGGTGAGATCCCTTAATTCCATTCCTTCAGGAAGTTTTATTTGTGAGTATATAGGAGAGCTCCTTGAAGAGAAGGAAGCTGAAGCAAGAGCTGGTAATGATGAGTATCTGTTTGATATTGGGAATAACTATAATGATAATTCTCTTTGGGATGGACTTTCGACACTCATGCCTGATGCACACTCAAGTTCTTATGAAGTTGTGGAGGAAGGTAGCTTCACCATTGATGCTGCACGGAAAGGCAATTTGGGGAGATTTATCAACCATAGTTGTTCTCCTAATCTTTATGCCCAAAATGTCCTTTATGATCATGAGGACAACAGAATTCCTCACATTATGTTCTTTGCCGCTGAGAACATTCCTCCGTTGCAAGAGTTGACTTATCATTACAATTATATAATGGATCAGGTTCATGATTCCAATGGCAATATAAAGAAGAAGAATTGCTATTGCGGTTCTCCAGAGTGCACTGGCAGGCTGTATTGA

Protein Analysis

1042

Amino Acids

114.23

Weight (kDa)

5.58

Isoelectric Point (pI)

42.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SAD_SRA PF02182 592 - 740 1.5e-52 SAD/SRA domain
Pre-SET PF05033 767 - 861 1.3e-22 Pre-SET motif
SET PF00856 880 - 1012 9e-23 SET domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000355)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G22740 AT2G22740 AT2G35160 AT2G35160 AT2G35160 AT2G35160 AT2G35160
fragaria_vesca FvH4_5g20100 FvH4_5g20130 FvH4_5g20130 FvH4_5g20130 FvH4_5g20130 FvH4_5g20130 FvH4_5g20150 FvH4_5g25380 FvH4_5g30731 FvH4_5g30740
malus_domestica MD03G1258900.v1.1 MD04G1052400.v1.1 MD11G1279700.v1.1
prunus_persica Prupe.2G064400_v2.0.a1 Prupe.5G057000_v2.0.a1 Prupe.5G057400_v2.0.a1
pyrus_communis pycom03g20690 pycom04g04620 pycom11g24730
rosa_chinensis RchiOBHm_Chr7g0204991 RchiOBHm_Chr7g0205081 RchiOBHm_Chr7g0205121 RchiOBHm_Chr7g0205131 RchiOBHm_Chr7g0215601 RchiOBHm_Chr7g0225631
rosa_laevigata RLG00000001799 RLG00000002623 RLG00000002644 RLG00000003398 RLG00000003403 RLG00000003417 RLG00000034641
rosa_multiflora Rmu_co8235369.1_g000001 Rmu_co8353775.1_g000001 Rmu_co8458607.1_g000001 Rmu_sc0000898.1_g000043 Rmu_sc0000898.1_g000048 Rmu_sc0001072.1_g000001 Rmu_sc0001072.1_g000002 Rmu_sc0003876.1_g000010 Rmu_sc0005112.1_g000021 Rmu_sc0007602.1_g000010 Rmu_sc0009349.1_g000014 Rmu_sc0020855.1_g000001 Rmu_sc0023402.1_g000001 Rmu_sc0024226.1_g000004
rosa_roxburghii Rroxscaffold_3G00233620 Rroxscaffold_3G00244060 Rroxscaffold_3G00252560 Rroxscaffold_3G00252590 Rroxscaffold_3G00252620
rosa_rugosa Rorug07G0086900 Rorug07G0087000 Rorug07G0087000 Rorug07G0087400 Rorug07G0087500 Rorug07G0087600 Rorug07G0087700 Rorug07G0087800 Rorug07G0088100 Rorug07G0095600.1 Rorug07G0095700.1 Rorug07G0095800.1 Rorug07G0095900 Rorug07G0096000 Rorug07G0096100 Rorug07G0155000 Rorug07G0232100
rosa_samantha Rh7AG217900 Rh7AG218400 Rh7AG219000 Rh7AG291200 Rh7AG371700 Rh7BG214800 Rh7BG215000 Rh7BG215500 Rh7BG223800 Rh7BG224400 Rh7BG283300 Rh7BG283800 Rh7BG366000 Rh7CG231100 Rh7CG231600 Rh7CG232000 Rh7CG241100 Rh7CG311200 Rh7CG390400 Rh7DG225200 Rh7DG225900 Rh7DG226400 Rh7DG295000 Rh7DG376800
rosa_wichuraiana Rw0G004730 Rw7G018880 Rw7G018900 Rw7G018920 Rw7G018940 Rw7G018960 Rw7G024860 Rw7G031790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2190
Acc36I ACCTGC 1 cut(s) 458
AccB1I GGYRCC 2 cut(s) 251, 2397
AccB7I CCANNNNNTGG 2 cut(s) 1328, 1397
AccI GTMKAC 1 cut(s) 1212
AclWI GGATC 7 cut(s) 544, 1097, 1459, 1723, 2482, 2646, 3054
AcsI RAATTY 5 cut(s) 865, 1854, 2258, 2616, 2967
AcuI CTGAAG 6 cut(s) 96, 1020, 2028, 2264, 2655, 2745
AfaI GTAC 8 cut(s) 226, 240, 294, 481, 607, 1266, 1474, 2431
AflIII ACRYGT 2 cut(s) 802, 1531
AhlI ACTAGT 1 cut(s) 2375
AjnI CCWGG 3 cut(s) 860, 1390, 1786
AjuI GAANNNNNNNTTGG 2 cut(s) 2873, 2905
AleI CACNNNNGTG 1 cut(s) 1534
AloI GAACNNNNNNTCC 4 cut(s) 183, 215, 1002, 1034
Alw21I GWGCWC 2 cut(s) 2706, 3113
Alw26I GTCTC 3 cut(s) 163, 811, 1613
Alw44I GTGCAC 1 cut(s) 3109
AlwI GGATC 7 cut(s) 544, 1097, 1459, 1723, 2482, 2646, 3054
AlwNI CAGNNNCTG 1 cut(s) 473
AoxI GGCC 4 cut(s) 858, 1840, 1969, 2168
ApaLI GTGCAC 1 cut(s) 3109
ApeKI GCWGC 6 cut(s) 776, 848, 1280, 1483, 1721, 2873
ApoI RAATTY 5 cut(s) 865, 1854, 2258, 2616, 2967
Asp700I GAANNNNTTC 2 cut(s) 730, 966
AspS9I GGNCC 4 cut(s) 470, 1969, 2168, 2546
AsuC2I CCSGG 1 cut(s) 183
AsuII TTCGAA 1 cut(s) 2364
AvaII GGWCC 2 cut(s) 470, 2546
BaeGI GKGCMC 2 cut(s) 1541, 3113
BanI GGYRCC 2 cut(s) 251, 2397
BanII GRGCYC 1 cut(s) 2706
BauI CACGAG 1 cut(s) 971
BbsI GAAGAC 1 cut(s) 805
Bbv12I GWGCWC 2 cut(s) 2706, 3113
BbvI GCAGC 6 cut(s) 788, 835, 1267, 1495, 1733, 2860
BceAI ACGGC 1 cut(s) 1028
BcgI CGANNNNNNTGC 2 cut(s) 2794, 2828
BciT130I CCWGG 3 cut(s) 862, 1392, 1788
BclI TGATCA 2 cut(s) 487, 2950
BcnI CCSGG 1 cut(s) 183
BcoDI GTCTC 3 cut(s) 163, 811, 1613
BcuI ACTAGT 1 cut(s) 2375
BfaI CTAG 5 cut(s) 42, 635, 780, 2112, 2376
BfmI CTRYAG 2 cut(s) 774, 1481
BfuAI ACCTGC 1 cut(s) 458
BglI GCCNNNNNGGC 1 cut(s) 857
BisI GCNGC 9 cut(s) 777, 849, 1281, 1484, 1628, 1722, 2401, 2874, 2991
BlpI GCTNAGC 1 cut(s) 2523
BlsI GCNGC 9 cut(s) 778, 850, 1282, 1485, 1629, 1723, 2402, 2875, 2992
Bme1390I CCNGG 4 cut(s) 183, 862, 1392, 1788
Bme18I GGWCC 2 cut(s) 470, 2546
BmgT120I GGNCC 4 cut(s) 470, 1969, 2168, 2546
BmiI GGNNCC 6 cut(s) 253, 372, 708, 2004, 2169, 2399
BmrFI CCNGG 4 cut(s) 183, 862, 1392, 1788
BmrI ACTGGG 2 cut(s) 123, 1277
BmsI GCATC 9 cut(s) 34, 62, 439, 1292, 1924, 1925, 2429, 2809, 2860
BmuI ACTGGG 2 cut(s) 123, 1277
BoxI GACNNNNGTC 1 cut(s) 2120
BpiI GAAGAC 1 cut(s) 805
BpmI CTGGAG 2 cut(s) 1029, 3087
Bpu1102I GCTNAGC 1 cut(s) 2523
Bpu14I TTCGAA 1 cut(s) 2364
BpuEI CTTGAG 3 cut(s) 1119, 1718, 2812
BpuMI CCSGG 1 cut(s) 183
BsaAI YACGTR 2 cut(s) 1753, 2270
BsaBI GATNNNNATC 1 cut(s) 2748
BsaJI CCNNGG 4 cut(s) 852, 1468, 1972, 2415
BsaWI WCCGGW 1 cut(s) 691
Bse1I ACTGG 8 cut(s) 129, 255, 374, 1012, 1272, 1905, 2590, 3118
Bse3DI GCAATG 4 cut(s) 216, 1150, 1576, 1622
Bse8I GATNNNNATC 1 cut(s) 2748
BseBI CCWGG 3 cut(s) 862, 1392, 1788
BseDI CCNNGG 4 cut(s) 852, 1468, 1972, 2415
BseJI GATNNNNATC 1 cut(s) 2748
BseMI GCAATG 4 cut(s) 216, 1150, 1576, 1622
BseMII CTCAG 7 cut(s) 245, 299, 486, 570, 822, 2442, 2985
BseNI ACTGG 8 cut(s) 129, 255, 374, 1012, 1272, 1905, 2590, 3118
BseRI GAGGAG 2 cut(s) 783, 1533
BseSI GKGCMC 2 cut(s) 1541, 3113
BseXI GCAGC 6 cut(s) 788, 835, 1267, 1495, 1733, 2860
BseYI CCCAGC 1 cut(s) 314
BsgI GTGCAG 2 cut(s) 2487, 2859
BshFI GGCC 4 cut(s) 860, 1842, 1971, 2170
BshNI GGYRCC 2 cut(s) 251, 2397
BsiHKAI GWGCWC 2 cut(s) 2706, 3113
BsiSI CCGG 2 cut(s) 182, 692
BslFI GGGAC 4 cut(s) 833, 1050, 1171, 1903
BsmAI GTCTC 3 cut(s) 163, 811, 1613
BsmFI GGGAC 4 cut(s) 833, 1050, 1171, 1903
BsmI GAATGC 2 cut(s) 850, 1415
BsnI GGCC 4 cut(s) 860, 1842, 1971, 2170
Bsp119I TTCGAA 1 cut(s) 2364
Bsp1286I GDGCHC 3 cut(s) 1541, 2706, 3113
Bsp1720I GCTNAGC 1 cut(s) 2523
BspANI GGCC 4 cut(s) 860, 1842, 1971, 2170
BspCNI CTCAG 7 cut(s) 244, 298, 487, 569, 821, 2443, 2986
BspHI TCATGA 2 cut(s) 2953, 3055
BspLI GGNNCC 6 cut(s) 253, 372, 708, 2004, 2169, 2399
BspMAI CTGCAG 2 cut(s) 778, 1485
BspMI ACCTGC 1 cut(s) 458
BspPI GGATC 7 cut(s) 544, 1097, 1459, 1723, 2482, 2646, 3054
BspT104I TTCGAA 1 cut(s) 2364
BspT107I GGYRCC 2 cut(s) 251, 2397
BsrDI GCAATG 4 cut(s) 216, 1150, 1576, 1622
BsrI ACTGG 8 cut(s) 129, 255, 374, 1012, 1272, 1905, 2590, 3118
BssECI CCNNGG 4 cut(s) 852, 1468, 1972, 2415
BssNAI GTATAC 1 cut(s) 1213
BssSI CACGAG 1 cut(s) 971
BssT1I CCWWGG 3 cut(s) 1468, 1972, 2415
Bst1107I GTATAC 1 cut(s) 1213
Bst2BI CACGAG 1 cut(s) 971
Bst2UI CCWGG 3 cut(s) 862, 1392, 1788
Bst4CI ACNGT 4 cut(s) 49, 610, 619, 1229
Bst6I CTCTTC 3 cut(s) 736, 957, 2706
BstBAI YACGTR 2 cut(s) 1753, 2270
BstBI TTCGAA 1 cut(s) 2364
BstC8I GCNNGC 4 cut(s) 1481, 2229, 2405, 3119
BstDSI CCRYGG 1 cut(s) 852
BstMAI GTCTC 3 cut(s) 163, 811, 1613
BstMWI GCNNNNNNNGC 3 cut(s) 857, 1698, 1848
BstNI CCWGG 3 cut(s) 862, 1392, 1788
BstNSI RCATGY 3 cut(s) 806, 1043, 1535
BstPAI GACNNNNGTC 1 cut(s) 2120
BstSCI CCNGG 4 cut(s) 181, 860, 1390, 1786
BstSFI CTRYAG 2 cut(s) 774, 1481
BstSLI GKGCMC 2 cut(s) 1541, 3113
BstSNI TACGTA 1 cut(s) 1753
BstV1I GCAGC 6 cut(s) 788, 835, 1267, 1495, 1733, 2860
BstV2I GAAGAC 1 cut(s) 805
BstX2I RGATCY 4 cut(s) 1451, 1728, 2487, 2651
BstXI CCANNNNNNTGG 1 cut(s) 262
BstYI RGATCY 4 cut(s) 1451, 1728, 2487, 2651
BstZ17I GTATAC 1 cut(s) 1213
BsuRI GGCC 4 cut(s) 860, 1842, 1971, 2170
BtgI CCRYGG 1 cut(s) 852
BtgZI GCGATG 1 cut(s) 39
BtsIMutI CAGTG 3 cut(s) 262, 1125, 3111
BveI ACCTGC 1 cut(s) 458
Cac8I GCNNGC 4 cut(s) 1481, 2229, 2405, 3119
CaiI CAGNNNCTG 1 cut(s) 473
CciI TCATGA 2 cut(s) 2953, 3055
Cfr13I GGNCC 4 cut(s) 470, 1969, 2168, 2546
CsiI ACCWGGT 1 cut(s) 1390
Csp6I GTAC 8 cut(s) 225, 239, 293, 480, 606, 1265, 1473, 2430
CviQI GTAC 8 cut(s) 225, 239, 293, 480, 606, 1265, 1473, 2430
DraI TTTAAA 2 cut(s) 1435, 2623
Eam1104I CTCTTC 3 cut(s) 736, 957, 2706
EarI CTCTTC 3 cut(s) 736, 957, 2706
EciI GGCGGA 1 cut(s) 168
Ecl136II GAGCTC 1 cut(s) 2704
Eco105I TACGTA 1 cut(s) 1753
Eco130I CCWWGG 3 cut(s) 1468, 1972, 2415
Eco24I GRGCYC 1 cut(s) 2706
Eco32I GATATC 1 cut(s) 788
Eco47I GGWCC 2 cut(s) 470, 2546
Eco53kI GAGCTC 1 cut(s) 2704
Eco57I CTGAAG 6 cut(s) 96, 1020, 2028, 2264, 2655, 2745
EcoICRI GAGCTC 1 cut(s) 2704
EcoO109I RGGNCCY 2 cut(s) 470, 2168
EcoRI GAATTC 1 cut(s) 2967
EcoRII CCWGG 3 cut(s) 860, 1390, 1786
EcoRV GATATC 1 cut(s) 788
EcoT14I CCWWGG 3 cut(s) 1468, 1972, 2415
EcoT22I ATGCAT 1 cut(s) 1076
EcoT38I GRGCYC 1 cut(s) 2706
ErhI CCWWGG 3 cut(s) 1468, 1972, 2415
FaqI GGGAC 4 cut(s) 833, 1050, 1171, 1903
FauI CCCGC 5 cut(s) 30, 411, 503, 1706, 2412
FauNDI CATATG 1 cut(s) 2119
FbaI TGATCA 2 cut(s) 487, 2950
FblI GTMKAC 1 cut(s) 1212
Fnu4HI GCNGC 9 cut(s) 777, 849, 1281, 1484, 1628, 1722, 2401, 2874, 2991
FriOI GRGCYC 1 cut(s) 2706
Fsp4HI GCNGC 9 cut(s) 777, 849, 1281, 1484, 1628, 1722, 2401, 2874, 2991
FspBI CTAG 5 cut(s) 42, 635, 780, 2112, 2376
GluI GCNGC 9 cut(s) 777, 849, 1281, 1484, 1628, 1722, 2401, 2874, 2991
GsaI CCCAGC 1 cut(s) 318
GsuI CTGGAG 2 cut(s) 1029, 3087
HaeIII GGCC 4 cut(s) 860, 1842, 1971, 2170
HapII CCGG 2 cut(s) 182, 692
HincII GTYRAC 2 cut(s) 2219, 3021
HindII GTYRAC 2 cut(s) 2219, 3021
HindIII AAGCTT 2 cut(s) 267, 2018
HpaII CCGG 2 cut(s) 182, 692
Hpy166II GTNNAC 6 cut(s) 293, 544, 1213, 2219, 3021, 3111
Hpy8I GTNNAC 6 cut(s) 293, 544, 1213, 2219, 3021, 3111
HpyCH4III ACNGT 4 cut(s) 49, 610, 619, 1229
HpyCH4IV ACGT 2 cut(s) 1752, 2269
HpyF10VI GCNNNNNNNGC 3 cut(s) 857, 1698, 1848
HpySE526I ACGT 2 cut(s) 1752, 2269
Ksp22I TGATCA 2 cut(s) 487, 2950
LmnI GCTCC 3 cut(s) 370, 1778, 2709
Lsp1109I GCAGC 6 cut(s) 788, 835, 1267, 1495, 1733, 2860
LweI GCATC 9 cut(s) 34, 62, 439, 1292, 1924, 1925, 2429, 2809, 2860
MabI ACCWGGT 1 cut(s) 1390
MaeI CTAG 5 cut(s) 42, 635, 780, 2112, 2376
MaeII ACGT 2 cut(s) 1752, 2269
MaeIII GTNAC 3 cut(s) 893, 1003, 1597
MfeI CAATTG 2 cut(s) 453, 1593
MflI RGATCY 4 cut(s) 1451, 1728, 2487, 2651
MhlI GDGCHC 3 cut(s) 1541, 2706, 3113
MlyI GAGTC 4 cut(s) 26, 1451, 2318, 2441
MmeI TCCRAC 1 cut(s) 864
Mph1103I ATGCAT 1 cut(s) 1076
MroXI GAANNNNTTC 2 cut(s) 730, 966
MslI CAYNNNNRTG 1 cut(s) 1534
MspA1I CMGCKG 4 cut(s) 560, 812, 2200, 2993
MspI CCGG 2 cut(s) 182, 692
MspR9I CCNGG 4 cut(s) 183, 862, 1392, 1788
MunI CAATTG 2 cut(s) 453, 1593
Mva1269I GAATGC 2 cut(s) 850, 1415
MvaI CCWGG 3 cut(s) 862, 1392, 1788
MwoI GCNNNNNNNGC 3 cut(s) 857, 1698, 1848
NciI CCSGG 1 cut(s) 183
NdeI CATATG 1 cut(s) 2119
NlaIV GGNNCC 6 cut(s) 253, 372, 708, 2004, 2169, 2399
NmuCI GTSAC 2 cut(s) 893, 1597
NsiI ATGCAT 1 cut(s) 1076
NspI RCATGY 3 cut(s) 806, 1043, 1535
NspV TTCGAA 1 cut(s) 2364
OliI CACNNNNGTG 1 cut(s) 1534
PagI TCATGA 2 cut(s) 2953, 3055
PciI ACATGT 2 cut(s) 802, 1531
PctI GAATGC 2 cut(s) 850, 1415
PdmI GAANNNNTTC 2 cut(s) 730, 966
PfeI GAWTC 7 cut(s) 424, 578, 1510, 2065, 2080, 2093, 3059
PflMI CCANNNNNTGG 2 cut(s) 1328, 1397
PfoI TCCNGGA 1 cut(s) 1786
PkrI GCNGC 9 cut(s) 778, 850, 1282, 1485, 1629, 1723, 2402, 2875, 2992
PleI GAGTC 4 cut(s) 26, 1450, 2317, 2441
PpsI GAGTC 4 cut(s) 26, 1450, 2317, 2441
Ppu21I YACGTR 2 cut(s) 1753, 2270
PpuMI RGGWCCY 1 cut(s) 470
PscI ACATGT 2 cut(s) 802, 1531
PshAI GACNNNNGTC 1 cut(s) 2120
PsiI TTATAA 1 cut(s) 2190
Psp124BI GAGCTC 1 cut(s) 2706
Psp5II RGGWCCY 1 cut(s) 470
Psp6I CCWGG 3 cut(s) 860, 1390, 1786
PspFI CCCAGC 1 cut(s) 314
PspGI CCWGG 3 cut(s) 860, 1390, 1786
PspN4I GGNNCC 6 cut(s) 253, 372, 708, 2004, 2169, 2399
PspPI GGNCC 4 cut(s) 470, 1969, 2168, 2546
PspPPI RGGWCCY 1 cut(s) 470
PstI CTGCAG 2 cut(s) 778, 1485
PstNI CAGNNNCTG 1 cut(s) 473
PsuI RGATCY 4 cut(s) 1451, 1728, 2487, 2651
PvuII CAGCTG 3 cut(s) 560, 812, 2200
RsaI GTAC 8 cut(s) 226, 240, 294, 481, 607, 1266, 1474, 2431
RsaNI GTAC 8 cut(s) 225, 239, 293, 480, 606, 1265, 1473, 2430
RseI CAYNNNNRTG 1 cut(s) 1534
SacI GAGCTC 1 cut(s) 2706
SatI GCNGC 9 cut(s) 777, 849, 1281, 1484, 1628, 1722, 2401, 2874, 2991
Sau96I GGNCC 4 cut(s) 470, 1969, 2168, 2546
SchI GAGTC 4 cut(s) 26, 1451, 2318, 2441
ScrFI CCNGG 4 cut(s) 183, 862, 1392, 1788
SduI GDGCHC 3 cut(s) 1541, 2706, 3113
SexAI ACCWGGT 1 cut(s) 1390
SfaNI GCATC 9 cut(s) 34, 62, 439, 1292, 1924, 1925, 2429, 2809, 2860
SfcI CTRYAG 2 cut(s) 774, 1481
SfuI TTCGAA 1 cut(s) 2364
SinI GGWCC 2 cut(s) 470, 2546
SmiMI CAYNNNNRTG 1 cut(s) 1534
SmlI CTYRAG 3 cut(s) 1134, 1733, 2827
SmoI CTYRAG 3 cut(s) 1134, 1733, 2827
SnaBI TACGTA 1 cut(s) 1753
SpeI ACTAGT 1 cut(s) 2375
SspMI CTAG 5 cut(s) 42, 635, 780, 2112, 2376
SstI GAGCTC 1 cut(s) 2706
StyD4I CCNGG 4 cut(s) 181, 860, 1390, 1786
StyI CCWWGG 3 cut(s) 1468, 1972, 2415
TaaI ACNGT 4 cut(s) 49, 610, 619, 1229
TaiI ACGT 2 cut(s) 1755, 2272
TaqI TCGA 5 cut(s) 796, 1231, 2286, 2364, 2804
TatI WGTACW 2 cut(s) 1264, 2429
TauI GCSGC 3 cut(s) 1630, 2403, 2993
TfiI GAWTC 7 cut(s) 424, 578, 1510, 2065, 2080, 2093, 3059
TscAI CASTG 3 cut(s) 262, 1132, 3118
TseFI GTSAC 2 cut(s) 893, 1597
TseI GCWGC 6 cut(s) 776, 848, 1280, 1483, 1721, 2873
Tsp45I GTSAC 2 cut(s) 893, 1597
TspGWI ACGGA 5 cut(s) 543, 869, 1363, 2893, 2997
TspRI CASTG 3 cut(s) 262, 1132, 3118
Van91I CCANNNNNTGG 2 cut(s) 1328, 1397
VneI GTGCAC 1 cut(s) 3109
VpaK11BI GGWCC 2 cut(s) 470, 2546
XapI RAATTY 5 cut(s) 865, 1854, 2258, 2616, 2967
XceI RCATGY 3 cut(s) 806, 1043, 1535
XcmI CCANNNNNNNNNTGG 2 cut(s) 1859, 2229
XmiI GTMKAC 1 cut(s) 1212
XmnI GAANNNNTTC 2 cut(s) 730, 966
XspI CTAG 5 cut(s) 42, 635, 780, 2112, 2376
Zsp2I ATGCAT 1 cut(s) 1076
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.