histone-lysine N-methyltransferase, H3 lysine-9 specific
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2190 |
| Acc36I | ACCTGC | 1 cut(s) | 458 |
| Acc65I | GGTACC | 1 cut(s) | 251 |
| AccB1I | GGYRCC | 2 cut(s) | 251, 2397 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1328, 1397 |
| AccI | GTMKAC | 1 cut(s) | 1212 |
| AclWI | GGATC | 7 cut(s) | 544, 1097, 1459, 1723, 2482, 2646, 3054 |
| AcsI | RAATTY | 5 cut(s) | 865, 1854, 2258, 2616, 2967 |
| AcuI | CTGAAG | 6 cut(s) | 96, 1020, 2028, 2264, 2655, 2745 |
| AfaI | GTAC | 9 cut(s) | 226, 240, 253, 294, 481, 607, 1266, 1474, 2431 |
| AflIII | ACRYGT | 2 cut(s) | 802, 1531 |
| AhlI | ACTAGT | 1 cut(s) | 2375 |
| AjnI | CCWGG | 3 cut(s) | 860, 1390, 1786 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2873, 2905 |
| AleI | CACNNNNGTG | 1 cut(s) | 1534 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 183, 215, 1002, 1034 |
| Alw21I | GWGCWC | 2 cut(s) | 2706, 3113 |
| Alw26I | GTCTC | 3 cut(s) | 163, 811, 1613 |
| Alw44I | GTGCAC | 1 cut(s) | 3109 |
| AlwI | GGATC | 7 cut(s) | 544, 1097, 1459, 1723, 2482, 2646, 3054 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 473 |
| AoxI | GGCC | 4 cut(s) | 858, 1840, 1969, 2168 |
| ApaLI | GTGCAC | 1 cut(s) | 3109 |
| ApeKI | GCWGC | 6 cut(s) | 776, 848, 1280, 1483, 1721, 2873 |
| ApoI | RAATTY | 5 cut(s) | 865, 1854, 2258, 2616, 2967 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 730, 966 |
| Asp718I | GGTACC | 1 cut(s) | 251 |
| AspS9I | GGNCC | 4 cut(s) | 470, 1969, 2168, 2546 |
| AsuC2I | CCSGG | 1 cut(s) | 183 |
| AsuII | TTCGAA | 1 cut(s) | 2364 |
| AvaII | GGWCC | 2 cut(s) | 470, 2546 |
| BaeGI | GKGCMC | 2 cut(s) | 1541, 3113 |
| BanI | GGYRCC | 2 cut(s) | 251, 2397 |
| BanII | GRGCYC | 1 cut(s) | 2706 |
| BauI | CACGAG | 1 cut(s) | 971 |
| BbsI | GAAGAC | 1 cut(s) | 805 |
| Bbv12I | GWGCWC | 2 cut(s) | 2706, 3113 |
| BbvI | GCAGC | 6 cut(s) | 788, 835, 1267, 1495, 1733, 2860 |
| BceAI | ACGGC | 1 cut(s) | 1028 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2794, 2828 |
| BciT130I | CCWGG | 3 cut(s) | 862, 1392, 1788 |
| BclI | TGATCA | 2 cut(s) | 487, 2950 |
| BcnI | CCSGG | 1 cut(s) | 183 |
| BcoDI | GTCTC | 3 cut(s) | 163, 811, 1613 |
| BcuI | ACTAGT | 1 cut(s) | 2375 |
| BfaI | CTAG | 5 cut(s) | 42, 635, 780, 2112, 2376 |
| BfmI | CTRYAG | 2 cut(s) | 774, 1481 |
| BfuAI | ACCTGC | 1 cut(s) | 458 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 857 |
| BisI | GCNGC | 9 cut(s) | 777, 849, 1281, 1484, 1628, 1722, 2401, 2874, 2991 |
| BlpI | GCTNAGC | 1 cut(s) | 2523 |
| BlsI | GCNGC | 9 cut(s) | 778, 850, 1282, 1485, 1629, 1723, 2402, 2875, 2992 |
| Bme1390I | CCNGG | 4 cut(s) | 183, 862, 1392, 1788 |
| Bme18I | GGWCC | 2 cut(s) | 470, 2546 |
| BmgT120I | GGNCC | 4 cut(s) | 470, 1969, 2168, 2546 |
| BmiI | GGNNCC | 6 cut(s) | 253, 372, 708, 2004, 2169, 2399 |
| BmrFI | CCNGG | 4 cut(s) | 183, 862, 1392, 1788 |
| BmrI | ACTGGG | 2 cut(s) | 123, 1277 |
| BmsI | GCATC | 9 cut(s) | 34, 62, 439, 1292, 1924, 1925, 2429, 2809, 2860 |
| BmuI | ACTGGG | 2 cut(s) | 123, 1277 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2120 |
| BpiI | GAAGAC | 1 cut(s) | 805 |
| BpmI | CTGGAG | 2 cut(s) | 1029, 3087 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2523 |
| Bpu14I | TTCGAA | 1 cut(s) | 2364 |
| BpuEI | CTTGAG | 3 cut(s) | 1119, 1718, 2812 |
| BpuMI | CCSGG | 1 cut(s) | 183 |
| BsaAI | YACGTR | 2 cut(s) | 1753, 2270 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2748 |
| BsaJI | CCNNGG | 4 cut(s) | 852, 1468, 1972, 2415 |
| BsaWI | WCCGGW | 1 cut(s) | 691 |
| Bse1I | ACTGG | 8 cut(s) | 129, 255, 374, 1012, 1272, 1905, 2590, 3118 |
| Bse3DI | GCAATG | 4 cut(s) | 216, 1150, 1576, 1622 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2748 |
| BseBI | CCWGG | 3 cut(s) | 862, 1392, 1788 |
| BseDI | CCNNGG | 4 cut(s) | 852, 1468, 1972, 2415 |
| BseJI | GATNNNNATC | 1 cut(s) | 2748 |
| BseMI | GCAATG | 4 cut(s) | 216, 1150, 1576, 1622 |
| BseMII | CTCAG | 7 cut(s) | 245, 299, 486, 570, 822, 2442, 2985 |
| BseNI | ACTGG | 8 cut(s) | 129, 255, 374, 1012, 1272, 1905, 2590, 3118 |
| BseRI | GAGGAG | 2 cut(s) | 783, 1533 |
| BseSI | GKGCMC | 2 cut(s) | 1541, 3113 |
| BseXI | GCAGC | 6 cut(s) | 788, 835, 1267, 1495, 1733, 2860 |
| BseYI | CCCAGC | 1 cut(s) | 314 |
| BsgI | GTGCAG | 2 cut(s) | 2487, 2859 |
| BshFI | GGCC | 4 cut(s) | 860, 1842, 1971, 2170 |
| BshNI | GGYRCC | 2 cut(s) | 251, 2397 |
| BsiHKAI | GWGCWC | 2 cut(s) | 2706, 3113 |
| BsiSI | CCGG | 2 cut(s) | 182, 692 |
| BslFI | GGGAC | 4 cut(s) | 833, 1050, 1171, 1903 |
| BsmAI | GTCTC | 3 cut(s) | 163, 811, 1613 |
| BsmFI | GGGAC | 4 cut(s) | 833, 1050, 1171, 1903 |
| BsmI | GAATGC | 2 cut(s) | 850, 1415 |
| BsnI | GGCC | 4 cut(s) | 860, 1842, 1971, 2170 |
| Bsp119I | TTCGAA | 1 cut(s) | 2364 |
| Bsp1286I | GDGCHC | 3 cut(s) | 1541, 2706, 3113 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2523 |
| BspANI | GGCC | 4 cut(s) | 860, 1842, 1971, 2170 |
| BspCNI | CTCAG | 7 cut(s) | 244, 298, 487, 569, 821, 2443, 2986 |
| BspHI | TCATGA | 2 cut(s) | 2953, 3055 |
| BspLI | GGNNCC | 6 cut(s) | 253, 372, 708, 2004, 2169, 2399 |
| BspMAI | CTGCAG | 2 cut(s) | 778, 1485 |
| BspMI | ACCTGC | 1 cut(s) | 458 |
| BspPI | GGATC | 7 cut(s) | 544, 1097, 1459, 1723, 2482, 2646, 3054 |
| BspT104I | TTCGAA | 1 cut(s) | 2364 |
| BspT107I | GGYRCC | 2 cut(s) | 251, 2397 |
| BsrDI | GCAATG | 4 cut(s) | 216, 1150, 1576, 1622 |
| BsrI | ACTGG | 8 cut(s) | 129, 255, 374, 1012, 1272, 1905, 2590, 3118 |
| BssECI | CCNNGG | 4 cut(s) | 852, 1468, 1972, 2415 |
| BssNAI | GTATAC | 1 cut(s) | 1213 |
| BssSI | CACGAG | 1 cut(s) | 971 |
| BssT1I | CCWWGG | 3 cut(s) | 1468, 1972, 2415 |
| Bst1107I | GTATAC | 1 cut(s) | 1213 |
| Bst2BI | CACGAG | 1 cut(s) | 971 |
| Bst2UI | CCWGG | 3 cut(s) | 862, 1392, 1788 |
| Bst4CI | ACNGT | 4 cut(s) | 49, 610, 619, 1229 |
| Bst6I | CTCTTC | 3 cut(s) | 736, 957, 2706 |
| BstBAI | YACGTR | 2 cut(s) | 1753, 2270 |
| BstBI | TTCGAA | 1 cut(s) | 2364 |
| BstC8I | GCNNGC | 4 cut(s) | 1481, 2229, 2405, 3119 |
| BstDSI | CCRYGG | 1 cut(s) | 852 |
| BstMAI | GTCTC | 3 cut(s) | 163, 811, 1613 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 857, 1698, 1848 |
| BstNI | CCWGG | 3 cut(s) | 862, 1392, 1788 |
| BstNSI | RCATGY | 3 cut(s) | 806, 1043, 1535 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2120 |
| BstSCI | CCNGG | 4 cut(s) | 181, 860, 1390, 1786 |
| BstSFI | CTRYAG | 2 cut(s) | 774, 1481 |
| BstSLI | GKGCMC | 2 cut(s) | 1541, 3113 |
| BstSNI | TACGTA | 1 cut(s) | 1753 |
| BstV1I | GCAGC | 6 cut(s) | 788, 835, 1267, 1495, 1733, 2860 |
| BstV2I | GAAGAC | 1 cut(s) | 805 |
| BstX2I | RGATCY | 4 cut(s) | 1451, 1728, 2487, 2651 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 262 |
| BstYI | RGATCY | 4 cut(s) | 1451, 1728, 2487, 2651 |
| BstZ17I | GTATAC | 1 cut(s) | 1213 |
| BsuRI | GGCC | 4 cut(s) | 860, 1842, 1971, 2170 |
| BtgI | CCRYGG | 1 cut(s) | 852 |
| BtgZI | GCGATG | 1 cut(s) | 39 |
| BtsIMutI | CAGTG | 3 cut(s) | 262, 1125, 3111 |
| BveI | ACCTGC | 1 cut(s) | 458 |
| Cac8I | GCNNGC | 4 cut(s) | 1481, 2229, 2405, 3119 |
| CaiI | CAGNNNCTG | 1 cut(s) | 473 |
| CciI | TCATGA | 2 cut(s) | 2953, 3055 |
| Cfr13I | GGNCC | 4 cut(s) | 470, 1969, 2168, 2546 |
| CsiI | ACCWGGT | 1 cut(s) | 1390 |
| Csp6I | GTAC | 9 cut(s) | 225, 239, 252, 293, 480, 606, 1265, 1473, 2430 |
| CviQI | GTAC | 9 cut(s) | 225, 239, 252, 293, 480, 606, 1265, 1473, 2430 |
| DraI | TTTAAA | 2 cut(s) | 1435, 2623 |
| Eam1104I | CTCTTC | 3 cut(s) | 736, 957, 2706 |
| EarI | CTCTTC | 3 cut(s) | 736, 957, 2706 |
| EciI | GGCGGA | 1 cut(s) | 168 |
| Ecl136II | GAGCTC | 1 cut(s) | 2704 |
| Eco105I | TACGTA | 1 cut(s) | 1753 |
| Eco130I | CCWWGG | 3 cut(s) | 1468, 1972, 2415 |
| Eco24I | GRGCYC | 1 cut(s) | 2706 |
| Eco32I | GATATC | 1 cut(s) | 788 |
| Eco47I | GGWCC | 2 cut(s) | 470, 2546 |
| Eco53kI | GAGCTC | 1 cut(s) | 2704 |
| Eco57I | CTGAAG | 6 cut(s) | 96, 1020, 2028, 2264, 2655, 2745 |
| EcoICRI | GAGCTC | 1 cut(s) | 2704 |
| EcoO109I | RGGNCCY | 2 cut(s) | 470, 2168 |
| EcoRI | GAATTC | 1 cut(s) | 2967 |
| EcoRII | CCWGG | 3 cut(s) | 860, 1390, 1786 |
| EcoRV | GATATC | 1 cut(s) | 788 |
| EcoT14I | CCWWGG | 3 cut(s) | 1468, 1972, 2415 |
| EcoT22I | ATGCAT | 1 cut(s) | 1076 |
| EcoT38I | GRGCYC | 1 cut(s) | 2706 |
| ErhI | CCWWGG | 3 cut(s) | 1468, 1972, 2415 |
| FaqI | GGGAC | 4 cut(s) | 833, 1050, 1171, 1903 |
| FauI | CCCGC | 5 cut(s) | 30, 411, 503, 1706, 2412 |
| FauNDI | CATATG | 1 cut(s) | 2119 |
| FbaI | TGATCA | 2 cut(s) | 487, 2950 |
| FblI | GTMKAC | 1 cut(s) | 1212 |
| Fnu4HI | GCNGC | 9 cut(s) | 777, 849, 1281, 1484, 1628, 1722, 2401, 2874, 2991 |
| FriOI | GRGCYC | 1 cut(s) | 2706 |
| Fsp4HI | GCNGC | 9 cut(s) | 777, 849, 1281, 1484, 1628, 1722, 2401, 2874, 2991 |
| FspBI | CTAG | 5 cut(s) | 42, 635, 780, 2112, 2376 |
| GluI | GCNGC | 9 cut(s) | 777, 849, 1281, 1484, 1628, 1722, 2401, 2874, 2991 |
| GsaI | CCCAGC | 1 cut(s) | 318 |
| GsuI | CTGGAG | 2 cut(s) | 1029, 3087 |
| HaeIII | GGCC | 4 cut(s) | 860, 1842, 1971, 2170 |
| HapII | CCGG | 2 cut(s) | 182, 692 |
| HincII | GTYRAC | 2 cut(s) | 2219, 3021 |
| HindII | GTYRAC | 2 cut(s) | 2219, 3021 |
| HindIII | AAGCTT | 2 cut(s) | 267, 2018 |
| HpaII | CCGG | 2 cut(s) | 182, 692 |
| Hpy166II | GTNNAC | 6 cut(s) | 293, 544, 1213, 2219, 3021, 3111 |
| Hpy8I | GTNNAC | 6 cut(s) | 293, 544, 1213, 2219, 3021, 3111 |
| HpyCH4III | ACNGT | 4 cut(s) | 49, 610, 619, 1229 |
| HpyCH4IV | ACGT | 2 cut(s) | 1752, 2269 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 857, 1698, 1848 |
| HpySE526I | ACGT | 2 cut(s) | 1752, 2269 |
| KpnI | GGTACC | 1 cut(s) | 255 |
| Ksp22I | TGATCA | 2 cut(s) | 487, 2950 |
| LmnI | GCTCC | 3 cut(s) | 370, 1778, 2709 |
| Lsp1109I | GCAGC | 6 cut(s) | 788, 835, 1267, 1495, 1733, 2860 |
| LweI | GCATC | 9 cut(s) | 34, 62, 439, 1292, 1924, 1925, 2429, 2809, 2860 |
| MabI | ACCWGGT | 1 cut(s) | 1390 |
| MaeI | CTAG | 5 cut(s) | 42, 635, 780, 2112, 2376 |
| MaeII | ACGT | 2 cut(s) | 1752, 2269 |
| MaeIII | GTNAC | 3 cut(s) | 893, 1003, 1597 |
| MfeI | CAATTG | 2 cut(s) | 453, 1593 |
| MflI | RGATCY | 4 cut(s) | 1451, 1728, 2487, 2651 |
| MhlI | GDGCHC | 3 cut(s) | 1541, 2706, 3113 |
| MlyI | GAGTC | 4 cut(s) | 26, 1451, 2318, 2441 |
| MmeI | TCCRAC | 1 cut(s) | 864 |
| Mph1103I | ATGCAT | 1 cut(s) | 1076 |
| MroXI | GAANNNNTTC | 2 cut(s) | 730, 966 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1534 |
| MspA1I | CMGCKG | 4 cut(s) | 560, 812, 2200, 2993 |
| MspI | CCGG | 2 cut(s) | 182, 692 |
| MspR9I | CCNGG | 4 cut(s) | 183, 862, 1392, 1788 |
| MunI | CAATTG | 2 cut(s) | 453, 1593 |
| Mva1269I | GAATGC | 2 cut(s) | 850, 1415 |
| MvaI | CCWGG | 3 cut(s) | 862, 1392, 1788 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 857, 1698, 1848 |
| NciI | CCSGG | 1 cut(s) | 183 |
| NdeI | CATATG | 1 cut(s) | 2119 |
| NlaIV | GGNNCC | 6 cut(s) | 253, 372, 708, 2004, 2169, 2399 |
| NmuCI | GTSAC | 2 cut(s) | 893, 1597 |
| NsiI | ATGCAT | 1 cut(s) | 1076 |
| NspI | RCATGY | 3 cut(s) | 806, 1043, 1535 |
| NspV | TTCGAA | 1 cut(s) | 2364 |
| OliI | CACNNNNGTG | 1 cut(s) | 1534 |
| PagI | TCATGA | 2 cut(s) | 2953, 3055 |
| PciI | ACATGT | 2 cut(s) | 802, 1531 |
| PctI | GAATGC | 2 cut(s) | 850, 1415 |
| PdmI | GAANNNNTTC | 2 cut(s) | 730, 966 |
| PfeI | GAWTC | 7 cut(s) | 424, 578, 1510, 2065, 2080, 2093, 3059 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1328, 1397 |
| PfoI | TCCNGGA | 1 cut(s) | 1786 |
| PkrI | GCNGC | 9 cut(s) | 778, 850, 1282, 1485, 1629, 1723, 2402, 2875, 2992 |
| PleI | GAGTC | 4 cut(s) | 26, 1450, 2317, 2441 |
| PpsI | GAGTC | 4 cut(s) | 26, 1450, 2317, 2441 |
| Ppu21I | YACGTR | 2 cut(s) | 1753, 2270 |
| PpuMI | RGGWCCY | 1 cut(s) | 470 |
| PscI | ACATGT | 2 cut(s) | 802, 1531 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2120 |
| PsiI | TTATAA | 1 cut(s) | 2190 |
| Psp124BI | GAGCTC | 1 cut(s) | 2706 |
| Psp5II | RGGWCCY | 1 cut(s) | 470 |
| Psp6I | CCWGG | 3 cut(s) | 860, 1390, 1786 |
| PspFI | CCCAGC | 1 cut(s) | 314 |
| PspGI | CCWGG | 3 cut(s) | 860, 1390, 1786 |
| PspN4I | GGNNCC | 6 cut(s) | 253, 372, 708, 2004, 2169, 2399 |
| PspPI | GGNCC | 4 cut(s) | 470, 1969, 2168, 2546 |
| PspPPI | RGGWCCY | 1 cut(s) | 470 |
| PstI | CTGCAG | 2 cut(s) | 778, 1485 |
| PstNI | CAGNNNCTG | 1 cut(s) | 473 |
| PsuI | RGATCY | 4 cut(s) | 1451, 1728, 2487, 2651 |
| PvuII | CAGCTG | 3 cut(s) | 560, 812, 2200 |
| RsaI | GTAC | 9 cut(s) | 226, 240, 253, 294, 481, 607, 1266, 1474, 2431 |
| RsaNI | GTAC | 9 cut(s) | 225, 239, 252, 293, 480, 606, 1265, 1473, 2430 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1534 |
| SacI | GAGCTC | 1 cut(s) | 2706 |
| SatI | GCNGC | 9 cut(s) | 777, 849, 1281, 1484, 1628, 1722, 2401, 2874, 2991 |
| Sau96I | GGNCC | 4 cut(s) | 470, 1969, 2168, 2546 |
| SchI | GAGTC | 4 cut(s) | 26, 1451, 2318, 2441 |
| ScrFI | CCNGG | 4 cut(s) | 183, 862, 1392, 1788 |
| SduI | GDGCHC | 3 cut(s) | 1541, 2706, 3113 |
| SexAI | ACCWGGT | 1 cut(s) | 1390 |
| SfaNI | GCATC | 9 cut(s) | 34, 62, 439, 1292, 1924, 1925, 2429, 2809, 2860 |
| SfcI | CTRYAG | 2 cut(s) | 774, 1481 |
| SfuI | TTCGAA | 1 cut(s) | 2364 |
| SinI | GGWCC | 2 cut(s) | 470, 2546 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1534 |
| SmlI | CTYRAG | 3 cut(s) | 1134, 1733, 2827 |
| SmoI | CTYRAG | 3 cut(s) | 1134, 1733, 2827 |
| SnaBI | TACGTA | 1 cut(s) | 1753 |
| SpeI | ACTAGT | 1 cut(s) | 2375 |
| SspMI | CTAG | 5 cut(s) | 42, 635, 780, 2112, 2376 |
| SstI | GAGCTC | 1 cut(s) | 2706 |
| StyD4I | CCNGG | 4 cut(s) | 181, 860, 1390, 1786 |
| StyI | CCWWGG | 3 cut(s) | 1468, 1972, 2415 |
| TaaI | ACNGT | 4 cut(s) | 49, 610, 619, 1229 |
| TaiI | ACGT | 2 cut(s) | 1755, 2272 |
| TaqI | TCGA | 5 cut(s) | 796, 1231, 2286, 2364, 2804 |
| TatI | WGTACW | 2 cut(s) | 1264, 2429 |
| TauI | GCSGC | 3 cut(s) | 1630, 2403, 2993 |
| TfiI | GAWTC | 7 cut(s) | 424, 578, 1510, 2065, 2080, 2093, 3059 |
| TscAI | CASTG | 3 cut(s) | 262, 1132, 3118 |
| TseFI | GTSAC | 2 cut(s) | 893, 1597 |
| TseI | GCWGC | 6 cut(s) | 776, 848, 1280, 1483, 1721, 2873 |
| Tsp45I | GTSAC | 2 cut(s) | 893, 1597 |
| TspGWI | ACGGA | 4 cut(s) | 869, 1363, 2893, 2997 |
| TspRI | CASTG | 3 cut(s) | 262, 1132, 3118 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1328, 1397 |
| VneI | GTGCAC | 1 cut(s) | 3109 |
| VpaK11BI | GGWCC | 2 cut(s) | 470, 2546 |
| XapI | RAATTY | 5 cut(s) | 865, 1854, 2258, 2616, 2967 |
| XceI | RCATGY | 3 cut(s) | 806, 1043, 1535 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1859, 2229 |
| XmiI | GTMKAC | 1 cut(s) | 1212 |
| XmnI | GAANNNNTTC | 2 cut(s) | 730, 966 |
| XspI | CTAG | 5 cut(s) | 42, 635, 780, 2112, 2376 |
| Zsp2I | ATGCAT | 1 cut(s) | 1076 |