Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0005112.1

Orthogroup ID

OG0000355

Physical Location & Seq

Genomic Coordinates Forward (+)

84760 .. 86184

Gene Structure 1425 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0005112.1_g000021.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1425 bp

atggggttgcagcagttggaatcatcgagaacaattgaacagctaagcggtagccattctgaggaaggattgggaagattgtccttggaaaatgggcccgagtataagagacccagagtgtctgcttttcgtgacttccctcctgggtgtggacggtatgcaacttcagttggtacttctaatggcattggtatggacatgactgtggccaaaaaatatcctcctcaaagaatagtagaatatgttcgggatttcccacctcaatgtggaataaatatatgtttcgaggccaaggcttttgatgatgtgaaaaaatcagaagtggatgttcaagatgaagagcttcactacagtgaattgaaagcagatgtttctcaagtcaatggtggcaactttctacctagtaatatgatggaacggaggatggaacgtccaagggagaagtcttttgatttatctaattctcataaccatctgcttgaagaagatgttgagagttcagaactgaaattgaataaagtaattccgaacttgaagcctgcatcacatccttcctggtggaagggaaaagtggcccacaagtctaaaccaggaggaggtatgagtgaaagacagggagagaaacctgattcaaagcttcagctagaaagatctaaagatgcttggaggacaaaatttggctcagagattggaggacactctaaaaagaatattcattcaatagcagggaagactactggttttggtcaggctagttctagcagcagccttcatgataataacacggatgccatccgaaaaaaggtgacagagacgttgggtcgtttcaaagctctttgtagacaactggaatatgacaagtcaaaggaaggaggaactccactcagaagggtcgattttaaagctgcaaagattctcaagaaggaaggaaaacatataaatactggcaaacaaatcttgggacatgtccccggtgttgaagttggcgatgaatttcattacaggattgaacttaatattgttggcttacatcacccaactcaaggtggtatagattatgcaacttttggtgggaagatgcttgcaactagtattgttgcatctgggggatatgctgatgatttgcataatttgaattccttgacttacacgggccaaggaggaaatgtgatgcatccggataaggaacctgaagatcaaaagcttcaacggggaaaccttgctttgaagaatagcatgcatgcaaagactcctgttagaatgatccgtggttctgaatcatcagatggaagaactaaatattatatatatgatggactatatttggtagtgaagtgttggaaggaaatggggcctcatggtaagcttgttttcaagtttcaactagacagaattgagggtcagagcttgctacgaaagaaataa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003676 GO:0003677 GO:0003824 GO:0005488 GO:0006325 GO:0006342 GO:0006355 GO:0006464 GO:0006479 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008168 GO:0008213 GO:0008276 GO:0008327 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010033 GO:0010200 GO:0010243 GO:0010428 GO:0010429 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016043 GO:0016458 GO:0016569 GO:0016570 GO:0016571 GO:0016740 GO:0016741 GO:0019219 GO:0019222 GO:0019538 GO:0031047 GO:0031048 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032259 GO:0036094 GO:0036211 GO:0040029 GO:0042054 GO:0042221 GO:0042493 GO:0043170 GO:0043412 GO:0043414 GO:0043565 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0045814 GO:0045892 GO:0045934 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051276 GO:0060255 GO:0065007 GO:0071704 GO:0071840 GO:0080090 GO:0097159 GO:0140096 GO:1901265 GO:1901363 GO:1901564 GO:1901698 GO:1901700 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko00310 ko04211 map00310 map04211

Pfam Domains

Protein Families

Pre-SET SAD_SRA SET

Protein Analysis

474

Amino Acids

52.85

Weight (kDa)

9.19

Isoelectric Point (pI)

46.24

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000355)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G22740 AT2G22740 AT2G35160 AT2G35160 AT2G35160 AT2G35160 AT2G35160
fragaria_vesca	FvH4_5g20100 FvH4_5g20130 FvH4_5g20130 FvH4_5g20130 FvH4_5g20130 FvH4_5g20130 FvH4_5g20150 FvH4_5g25380 FvH4_5g30731 FvH4_5g30740
malus_domestica	MD03G1258900.v1.1 MD04G1052400.v1.1 MD11G1279700.v1.1
prunus_persica	Prupe.2G064400_v2.0.a1 Prupe.5G057000_v2.0.a1 Prupe.5G057400_v2.0.a1
pyrus_communis	pycom03g20690 pycom04g04620 pycom11g24730
rosa_chinensis	RchiOBHm_Chr7g0204991 RchiOBHm_Chr7g0205081 RchiOBHm_Chr7g0205121 RchiOBHm_Chr7g0205131 RchiOBHm_Chr7g0215601 RchiOBHm_Chr7g0225631
rosa_laevigata	RLG00000001799 RLG00000002623 RLG00000002644 RLG00000003398 RLG00000003403 RLG00000003417 RLG00000034641
rosa_multiflora	Rmu_co8235369.1_g000001 Rmu_co8353775.1_g000001 Rmu_co8458607.1_g000001 Rmu_sc0000898.1_g000043 Rmu_sc0000898.1_g000048 Rmu_sc0001072.1_g000001 Rmu_sc0001072.1_g000002 Rmu_sc0003876.1_g000010 Rmu_sc0005112.1_g000021 Rmu_sc0007602.1_g000010 Rmu_sc0009349.1_g000014 Rmu_sc0020855.1_g000001 Rmu_sc0023402.1_g000001 Rmu_sc0024226.1_g000004
rosa_roxburghii	Rroxscaffold_3G00233620 Rroxscaffold_3G00244060 Rroxscaffold_3G00252560 Rroxscaffold_3G00252590 Rroxscaffold_3G00252620
rosa_rugosa	Rorug07G0086900 Rorug07G0087000 Rorug07G0087000 Rorug07G0087400 Rorug07G0087500 Rorug07G0087600 Rorug07G0087700 Rorug07G0087800 Rorug07G0088100 Rorug07G0095600.1 Rorug07G0095700.1 Rorug07G0095800.1 Rorug07G0095900 Rorug07G0096000 Rorug07G0096100 Rorug07G0155000 Rorug07G0232100
rosa_samantha	Rh7AG217900 Rh7AG218400 Rh7AG219000 Rh7AG291200 Rh7AG371700 Rh7BG214800 Rh7BG215000 Rh7BG215500 Rh7BG223800 Rh7BG224400 Rh7BG283300 Rh7BG283800 Rh7BG366000 Rh7CG231100 Rh7CG231600 Rh7CG232000 Rh7CG241100 Rh7CG311200 Rh7CG390400 Rh7DG225200 Rh7DG225900 Rh7DG226400 Rh7DG295000 Rh7DG376800
rosa_wichuraiana	Rw0G004730 Rw7G018880 Rw7G018900 Rw7G018920 Rw7G018940 Rw7G018960 Rw7G024860 Rw7G031790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	841
AccIII	TCCGGA	1 cut(s)	1177
AciI	CCGC	1 cut(s)	48
AclWI	GGATC	1 cut(s)	1258
AcoI	YGGCCR	1 cut(s)	207
AcsI	RAATTY	3 cut(s)	674, 992, 1135
AcuI	CTGAAG	3 cut(s)	150, 623, 1212
AfaI	GTAC	1 cut(s)	175
AfiI	CCNNNNNNNGG	6 cut(s)	61, 149, 266, 596, 802, 1043
AflIII	ACRYGT	1 cut(s)	964
AhdI	GACNNNNNGTC	1 cut(s)	819
AhlI	ACTAGT	1 cut(s)	1088
AjnI	CCWGG	3 cut(s)	142, 554, 589
AleI	CACNNNNGTG	1 cut(s)	351
AluBI	AGCT	9 cut(s)	43, 343, 637, 643, 833, 905, 1204, 1366, 1407
AluI	AGCT	9 cut(s)	43, 343, 637, 643, 833, 905, 1204, 1366, 1407
Alw26I	GTCTC	2 cut(s)	103, 806
AlwI	GGATC	1 cut(s)	1258
Ama87I	CYCGRG	1 cut(s)	98
Aor13HI	TCCGGA	1 cut(s)	1177
AoxI	GGCC	6 cut(s)	95, 207, 288, 573, 1153, 1352
ApaI	GGGCCC	1 cut(s)	99
ApeKI	GCWGC	4 cut(s)	10, 762, 765, 905
ApoI	RAATTY	3 cut(s)	674, 992, 1135
Asp700I	GAANNNNTTC	2 cut(s)	243, 342
AspS9I	GGNCC	5 cut(s)	95, 96, 574, 1153, 1352
AsuC2I	CCSGG	1 cut(s)	972
AsuHPI	GGTGA	2 cut(s)	817, 1025
AvaI	CYCGRG	1 cut(s)	98
BaeGI	GKGCMC	1 cut(s)	99
BalI	TGGCCA	1 cut(s)	209
BanII	GRGCYC	1 cut(s)	99
BbsI	GAAGAC	1 cut(s)	737
BbvI	GCAGC	4 cut(s)	22, 774, 777, 892
BccI	CCATC	6 cut(s)	406, 418, 480, 800, 1280, 1307
BciT130I	CCWGG	3 cut(s)	144, 556, 591
BcnI	CCSGG	1 cut(s)	972
BcoDI	GTCTC	2 cut(s)	103, 806
BcuI	ACTAGT	1 cut(s)	1088
BfaI	CTAG	6 cut(s)	402, 644, 753, 759, 1089, 1385
BfmI	CTRYAG	1 cut(s)	349
BglII	AGATCT	1 cut(s)	650
BisI	GCNGC	4 cut(s)	11, 763, 766, 906
BlpI	GCTNAGC	1 cut(s)	44
BlsI	GCNGC	4 cut(s)	12, 764, 767, 907
Bme1390I	CCNGG	4 cut(s)	144, 556, 591, 972
BmeRI	GACNNNNNGTC	1 cut(s)	819
BmeT110I	CYCGRG	1 cut(s)	98
BmgT120I	GGNCC	5 cut(s)	95, 96, 574, 1153, 1352
BmiI	GGNNCC	3 cut(s)	97, 1188, 1353
BmrFI	CCNGG	4 cut(s)	144, 556, 591, 972
BmsI	GCATC	7 cut(s)	551, 649, 778, 1068, 1109, 1161, 1183
BpiI	GAAGAC	1 cut(s)	737
Bpu1102I	GCTNAGC	1 cut(s)	44
BpuEI	CTTGAG	3 cut(s)	360, 902, 1026
BpuMI	CCSGG	1 cut(s)	972
BsaI	GGTCTC	1 cut(s)	103
BsaJI	CCNNGG	7 cut(s)	84, 143, 291, 434, 970, 1156, 1267
BsaWI	WCCGGW	1 cut(s)	1177
BsaXI	ACNNNNNCTCC	2 cut(s)	1152, 1182
Bsc4I	CCNNNNNNNGG	6 cut(s)	61, 149, 266, 596, 802, 1043
Bse1I	ACTGG	3 cut(s)	742, 852, 949
BseAI	TCCGGA	1 cut(s)	1177
BseBI	CCWGG	3 cut(s)	144, 556, 591
BseDI	CCNNGG	7 cut(s)	84, 143, 291, 434, 970, 1156, 1267
BseGI	GGATG	6 cut(s)	331, 429, 547, 792, 793, 1174
BseLI	CCNNNNNNNGG	6 cut(s)	61, 149, 266, 596, 802, 1043
BseMII	CTCAG	3 cut(s)	51, 696, 898
BseNI	ACTGG	3 cut(s)	742, 852, 949
BseRI	GAGGAG	2 cut(s)	213, 609
BseSI	GKGCMC	1 cut(s)	99
BseXI	GCAGC	4 cut(s)	22, 774, 777, 892
BshFI	GGCC	6 cut(s)	97, 209, 290, 575, 1155, 1354
BsiHKCI	CYCGRG	1 cut(s)	98
BsiSI	CCGG	2 cut(s)	972, 1178
BslFI	GGGAC	2 cut(s)	953, 975
BslI	CCNNNNNNNGG	6 cut(s)	61, 149, 266, 596, 802, 1043
BsmAI	GTCTC	2 cut(s)	103, 806
BsmBI	CGTCTC	1 cut(s)	806
BsmFI	GGGAC	2 cut(s)	953, 975
BsnI	GGCC	6 cut(s)	97, 209, 290, 575, 1155, 1354
Bso31I	GGTCTC	1 cut(s)	103
BsoBI	CYCGRG	1 cut(s)	98
Bsp120I	GGGCCC	1 cut(s)	95
Bsp1286I	GDGCHC	1 cut(s)	99
Bsp13I	TCCGGA	1 cut(s)	1177
Bsp143I	GATC	3 cut(s)	650, 1195, 1263
Bsp1720I	GCTNAGC	1 cut(s)	44
BspACI	CCGC	1 cut(s)	48
BspANI	GGCC	6 cut(s)	97, 209, 290, 575, 1155, 1354
BspCNI	CTCAG	3 cut(s)	52, 695, 897
BspEI	TCCGGA	1 cut(s)	1177
BspHI	TCATGA	1 cut(s)	772
BspLI	GGNNCC	3 cut(s)	97, 1188, 1353
BspPI	GGATC	1 cut(s)	1258
BspQI	GCTCTTC	1 cut(s)	333
BspTNI	GGTCTC	1 cut(s)	103
BsrI	ACTGG	3 cut(s)	742, 852, 949
BssECI	CCNNGG	7 cut(s)	84, 143, 291, 434, 970, 1156, 1267
BssMI	GATC	3 cut(s)	650, 1195, 1263
BssT1I	CCWWGG	4 cut(s)	84, 291, 434, 1156
Bst2UI	CCWGG	3 cut(s)	144, 556, 591
Bst4CI	ACNGT	3 cut(s)	156, 205, 353
Bst6I	CTCTTC	1 cut(s)	333
BstC8I	GCNNGC	5 cut(s)	540, 1083, 1238, 1242, 1409
BstDEI	CTNAG	4 cut(s)	44, 60, 682, 884
BstDSI	CCRYGG	1 cut(s)	1267
BstF5I	GGATG	6 cut(s)	331, 429, 547, 792, 793, 1174
BstKTI	GATC	3 cut(s)	653, 1198, 1266
BstMAI	GTCTC	2 cut(s)	103, 806
BstMBI	GATC	3 cut(s)	650, 1195, 1263
BstNI	CCWGG	3 cut(s)	144, 556, 591
BstNSI	RCATGY	3 cut(s)	968, 1240, 1244
BstSCI	CCNGG	4 cut(s)	142, 554, 589, 970
BstSFI	CTRYAG	1 cut(s)	349
BstSLI	GKGCMC	1 cut(s)	99
BstV1I	GCAGC	4 cut(s)	22, 774, 777, 892
BstV2I	GAAGAC	1 cut(s)	737
BstX2I	RGATCY	1 cut(s)	650
BstYI	RGATCY	1 cut(s)	650
BsuRI	GGCC	6 cut(s)	97, 209, 290, 575, 1155, 1354
BtgI	CCRYGG	1 cut(s)	1267
BtgZI	GCGATG	1 cut(s)	1002
BtsCI	GGATG	6 cut(s)	331, 429, 547, 792, 793, 1174
BtsIMutI	CAGTG	1 cut(s)	358
Cac8I	GCNNGC	5 cut(s)	540, 1083, 1238, 1242, 1409
CciI	TCATGA	1 cut(s)	772
Cfr13I	GGNCC	5 cut(s)	95, 96, 574, 1153, 1352
Csp6I	GTAC	1 cut(s)	174
CviAII	CATG	6 cut(s)	199, 773, 965, 1237, 1241, 1358
CviQI	GTAC	1 cut(s)	174
DdeI	CTNAG	4 cut(s)	44, 60, 682, 884
DpnI	GATC	3 cut(s)	652, 1197, 1265
DpnII	GATC	3 cut(s)	650, 1195, 1263
DraI	TTTAAA	1 cut(s)	901
DriI	GACNNNNNGTC	1 cut(s)	819
EaeI	YGGCCR	1 cut(s)	207
Eam1104I	CTCTTC	1 cut(s)	333
Eam1105I	GACNNNNNGTC	1 cut(s)	819
EarI	CTCTTC	1 cut(s)	333
Eco130I	CCWWGG	4 cut(s)	84, 291, 434, 1156
Eco24I	GRGCYC	1 cut(s)	99
Eco31I	GGTCTC	1 cut(s)	103
Eco57I	CTGAAG	3 cut(s)	150, 623, 1212
Eco88I	CYCGRG	1 cut(s)	98
EcoO109I	RGGNCCY	1 cut(s)	1352
EcoRI	GAATTC	1 cut(s)	1135
EcoRII	CCWGG	3 cut(s)	142, 554, 589
EcoT14I	CCWWGG	4 cut(s)	84, 291, 434, 1156
EcoT22I	ATGCAT	2 cut(s)	1176, 1242
EcoT38I	GRGCYC	1 cut(s)	99
ErhI	CCWWGG	4 cut(s)	84, 291, 434, 1156
Esp3I	CGTCTC	1 cut(s)	806
FaeI	CATG	6 cut(s)	202, 776, 968, 1240, 1244, 1361
FaqI	GGGAC	2 cut(s)	953, 975
FatI	CATG	6 cut(s)	198, 772, 964, 1236, 1240, 1357
FblI	GTMKAC	1 cut(s)	841
Fnu4HI	GCNGC	4 cut(s)	11, 763, 766, 906
FokI	GGATG	6 cut(s)	338, 436, 534, 779, 800, 1161
FriOI	GRGCYC	1 cut(s)	99
Fsp4HI	GCNGC	4 cut(s)	11, 763, 766, 906
FspBI	CTAG	6 cut(s)	402, 644, 753, 759, 1089, 1385
GluI	GCNGC	4 cut(s)	11, 763, 766, 906
HaeIII	GGCC	6 cut(s)	97, 209, 290, 575, 1155, 1354
HapII	CCGG	2 cut(s)	972, 1178
Hin1II	CATG	6 cut(s)	202, 776, 968, 1240, 1244, 1361
HindIII	AAGCTT	3 cut(s)	635, 1202, 1364
HinfI	GANTC	5 cut(s)	20, 629, 913, 1249, 1277
HpaII	CCGG	2 cut(s)	972, 1178
HphI	GGTGA	2 cut(s)	817, 1025
Hpy166II	GTNNAC	2 cut(s)	152, 842
Hpy188III	TCNNGA	7 cut(s)	27, 131, 248, 332, 773, 919, 1178
Hpy8I	GTNNAC	2 cut(s)	152, 842
HpyAV	CCTTC	9 cut(s)	59, 556, 561, 779, 863, 882, 916, 920, 1336
HpyCH4III	ACNGT	3 cut(s)	156, 205, 353
HpyCH4IV	ACGT	2 cut(s)	430, 815
HpyF3I	CTNAG	4 cut(s)	44, 60, 682, 884
HpySE526I	ACGT	2 cut(s)	430, 815
Hsp92II	CATG	6 cut(s)	202, 776, 968, 1240, 1244, 1361
Kpn2I	TCCGGA	1 cut(s)	1177
Kzo9I	GATC	3 cut(s)	650, 1195, 1263
LguI	GCTCTTC	1 cut(s)	333
Lsp1109I	GCAGC	4 cut(s)	22, 774, 777, 892
LweI	GCATC	7 cut(s)	551, 649, 778, 1068, 1109, 1161, 1183
MaeI	CTAG	6 cut(s)	402, 644, 753, 759, 1089, 1385
MaeII	ACGT	2 cut(s)	430, 815
MaeIII	GTNAC	2 cut(s)	131, 805
MalI	GATC	3 cut(s)	652, 1197, 1265
MboI	GATC	3 cut(s)	650, 1195, 1263
MboII	GAAGA	9 cut(s)	87, 350, 494, 497, 742, 1087, 1205, 1240, 1302
MfeI	CAATTG	1 cut(s)	33
MflI	RGATCY	1 cut(s)	650
MhlI	GDGCHC	1 cut(s)	99
MlsI	TGGCCA	1 cut(s)	209
MluNI	TGGCCA	1 cut(s)	209
MlyI	GAGTC	1 cut(s)	1243
MmeI	TCCRAC	1 cut(s)	1319
Mox20I	TGGCCA	1 cut(s)	209
Mph1103I	ATGCAT	2 cut(s)	1176, 1242
MroI	TCCGGA	1 cut(s)	1177
MroXI	GAANNNNTTC	2 cut(s)	243, 342
MscI	TGGCCA	1 cut(s)	209
MseI	TTAA	2 cut(s)	900, 1014
MslI	CAYNNNNRTG	4 cut(s)	191, 203, 262, 351
Msp20I	TGGCCA	1 cut(s)	209
MspI	CCGG	2 cut(s)	972, 1178
MspR9I	CCNGG	4 cut(s)	144, 556, 591, 972
MunI	CAATTG	1 cut(s)	33
MvaI	CCWGG	3 cut(s)	144, 556, 591
NciI	CCSGG	1 cut(s)	972
NdeII	GATC	3 cut(s)	650, 1195, 1263
NlaIII	CATG	6 cut(s)	202, 776, 968, 1240, 1244, 1361
NlaIV	GGNNCC	3 cut(s)	97, 1188, 1353
NmuCI	GTSAC	2 cut(s)	131, 805
NsiI	ATGCAT	2 cut(s)	1176, 1242
NspI	RCATGY	3 cut(s)	968, 1240, 1244
OliI	CACNNNNGTG	1 cut(s)	351
PaeI	GCATGC	2 cut(s)	1240, 1244
PagI	TCATGA	1 cut(s)	772
PciI	ACATGT	1 cut(s)	964
PciSI	GCTCTTC	1 cut(s)	333
PdmI	GAANNNNTTC	2 cut(s)	243, 342
PfeI	GAWTC	4 cut(s)	20, 629, 913, 1277
PkrI	GCNGC	4 cut(s)	12, 764, 767, 907
PleI	GAGTC	1 cut(s)	1243
PpsI	GAGTC	1 cut(s)	1243
PscI	ACATGT	1 cut(s)	964
Psp6I	CCWGG	3 cut(s)	142, 554, 589
PspGI	CCWGG	3 cut(s)	142, 554, 589
PspN4I	GGNNCC	3 cut(s)	97, 1188, 1353
PspOMI	GGGCCC	1 cut(s)	95
PspPI	GGNCC	5 cut(s)	95, 96, 574, 1153, 1352
PsrI	GAACNNNNNNTAC	2 cut(s)	228, 260
PsuI	RGATCY	1 cut(s)	650
RsaI	GTAC	1 cut(s)	175
RsaNI	GTAC	1 cut(s)	174
RseI	CAYNNNNRTG	4 cut(s)	191, 203, 262, 351
SapI	GCTCTTC	1 cut(s)	333
SaqAI	TTAA	2 cut(s)	900, 1014
SatI	GCNGC	4 cut(s)	11, 763, 766, 906
Sau3AI	GATC	3 cut(s)	650, 1195, 1263
Sau96I	GGNCC	5 cut(s)	95, 96, 574, 1153, 1352
SchI	GAGTC	1 cut(s)	1243
ScrFI	CCNGG	4 cut(s)	144, 556, 591, 972
SduI	GDGCHC	1 cut(s)	99
SfaNI	GCATC	7 cut(s)	551, 649, 778, 1068, 1109, 1161, 1183
SfcI	CTRYAG	1 cut(s)	349
SmiMI	CAYNNNNRTG	4 cut(s)	191, 203, 262, 351
SmlI	CTYRAG	3 cut(s)	375, 917, 1041
SmoI	CTYRAG	3 cut(s)	375, 917, 1041
SpeI	ACTAGT	1 cut(s)	1088
SphI	GCATGC	2 cut(s)	1240, 1244
SsiI	CCGC	1 cut(s)	48
SspI	AATATT	3 cut(s)	712, 1018, 1301
SspMI	CTAG	6 cut(s)	402, 644, 753, 759, 1089, 1385
StyD4I	CCNGG	4 cut(s)	142, 554, 589, 970
StyI	CCWWGG	4 cut(s)	84, 291, 434, 1156
TaaI	ACNGT	3 cut(s)	156, 205, 353
TaiI	ACGT	2 cut(s)	433, 818
TaqI	TCGA	3 cut(s)	26, 285, 894
TfiI	GAWTC	4 cut(s)	20, 629, 913, 1277
Tru1I	TTAA	2 cut(s)	900, 1014
Tru9I	TTAA	2 cut(s)	900, 1014
TscAI	CASTG	1 cut(s)	358
TseFI	GTSAC	2 cut(s)	131, 805
TseI	GCWGC	4 cut(s)	10, 762, 765, 905
Tsp45I	GTSAC	2 cut(s)	131, 805
TspDTI	ATGAA	5 cut(s)	351, 704, 761, 986, 1005
TspGWI	ACGGA	3 cut(s)	433, 800, 1256
TspRI	CASTG	1 cut(s)	358
XapI	RAATTY	3 cut(s)	674, 992, 1135
XceI	RCATGY	3 cut(s)	968, 1240, 1244
XmiI	GTMKAC	1 cut(s)	841
XmnI	GAANNNNTTC	2 cut(s)	243, 342
XspI	CTAG	6 cut(s)	402, 644, 753, 759, 1089, 1385
Zsp2I	ATGCAT	2 cut(s)	1176, 1242

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.