histone-lysine N-methyltransferase, H3 lysine-9 specific
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| SAD_SRA | PF02182 | 324 - 472 | 1.2e-52 | SAD/SRA domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 853 |
| AccIII | TCCGGA | 1 cut(s) | 1189 |
| AciI | CCGC | 2 cut(s) | 60, 589 |
| AclWI | GGATC | 1 cut(s) | 1270 |
| AcsI | RAATTY | 2 cut(s) | 1004, 1147 |
| AcuI | CTGAAG | 3 cut(s) | 162, 635, 1224 |
| AfaI | GTAC | 1 cut(s) | 187 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 73, 161, 278, 608, 814, 1055 |
| AflIII | ACRYGT | 1 cut(s) | 976 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 831 |
| AhlI | ACTAGT | 1 cut(s) | 1100 |
| AjnI | CCWGG | 3 cut(s) | 154, 566, 601 |
| AleI | CACNNNNGTG | 1 cut(s) | 363 |
| AluBI | AGCT | 9 cut(s) | 55, 355, 649, 655, 845, 917, 1216, 1378, 1419 |
| AluI | AGCT | 9 cut(s) | 55, 355, 649, 655, 845, 917, 1216, 1378, 1419 |
| Alw26I | GTCTC | 2 cut(s) | 115, 818 |
| AlwI | GGATC | 1 cut(s) | 1270 |
| Ama87I | CYCGRG | 1 cut(s) | 110 |
| Aor13HI | TCCGGA | 1 cut(s) | 1189 |
| AoxI | GGCC | 5 cut(s) | 107, 300, 585, 1165, 1364 |
| ApaI | GGGCCC | 1 cut(s) | 111 |
| ApeKI | GCWGC | 4 cut(s) | 22, 774, 777, 917 |
| ApoI | RAATTY | 2 cut(s) | 1004, 1147 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 255, 354 |
| AspS9I | GGNCC | 5 cut(s) | 107, 108, 586, 1165, 1364 |
| AsuC2I | CCSGG | 1 cut(s) | 984 |
| AsuHPI | GGTGA | 2 cut(s) | 829, 1037 |
| AvaI | CYCGRG | 1 cut(s) | 110 |
| BaeGI | GKGCMC | 1 cut(s) | 111 |
| BanII | GRGCYC | 1 cut(s) | 111 |
| BbsI | GAAGAC | 1 cut(s) | 749 |
| BbvI | GCAGC | 4 cut(s) | 34, 786, 789, 904 |
| BccI | CCATC | 6 cut(s) | 418, 430, 492, 812, 1292, 1319 |
| BciT130I | CCWGG | 3 cut(s) | 156, 568, 603 |
| BcnI | CCSGG | 1 cut(s) | 984 |
| BcoDI | GTCTC | 2 cut(s) | 115, 818 |
| BcuI | ACTAGT | 1 cut(s) | 1100 |
| BfaI | CTAG | 6 cut(s) | 414, 656, 765, 771, 1101, 1397 |
| BfmI | CTRYAG | 1 cut(s) | 361 |
| BglII | AGATCT | 1 cut(s) | 662 |
| BisI | GCNGC | 4 cut(s) | 23, 775, 778, 918 |
| BlpI | GCTNAGC | 1 cut(s) | 56 |
| BlsI | GCNGC | 4 cut(s) | 24, 776, 779, 919 |
| Bme1390I | CCNGG | 4 cut(s) | 156, 568, 603, 984 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 831 |
| BmeT110I | CYCGRG | 1 cut(s) | 110 |
| BmgT120I | GGNCC | 5 cut(s) | 107, 108, 586, 1165, 1364 |
| BmiI | GGNNCC | 3 cut(s) | 109, 1200, 1365 |
| BmrFI | CCNGG | 4 cut(s) | 156, 568, 603, 984 |
| BmsI | GCATC | 7 cut(s) | 563, 661, 790, 1080, 1121, 1173, 1195 |
| BpiI | GAAGAC | 1 cut(s) | 749 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 56 |
| BpuEI | CTTGAG | 3 cut(s) | 372, 914, 1038 |
| BpuMI | CCSGG | 1 cut(s) | 984 |
| BsaI | GGTCTC | 1 cut(s) | 115 |
| BsaJI | CCNNGG | 7 cut(s) | 96, 155, 303, 446, 982, 1168, 1279 |
| BsaWI | WCCGGW | 1 cut(s) | 1189 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1164, 1194 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 73, 161, 278, 608, 814, 1055 |
| Bse1I | ACTGG | 3 cut(s) | 754, 864, 961 |
| BseAI | TCCGGA | 1 cut(s) | 1189 |
| BseBI | CCWGG | 3 cut(s) | 156, 568, 603 |
| BseDI | CCNNGG | 7 cut(s) | 96, 155, 303, 446, 982, 1168, 1279 |
| BseGI | GGATG | 5 cut(s) | 343, 441, 559, 804, 1186 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 73, 161, 278, 608, 814, 1055 |
| BseMII | CTCAG | 3 cut(s) | 63, 708, 910 |
| BseNI | ACTGG | 3 cut(s) | 754, 864, 961 |
| BseRI | GAGGAG | 2 cut(s) | 225, 621 |
| BseSI | GKGCMC | 1 cut(s) | 111 |
| BseXI | GCAGC | 4 cut(s) | 34, 786, 789, 904 |
| BshFI | GGCC | 5 cut(s) | 109, 302, 587, 1167, 1366 |
| BsiHKCI | CYCGRG | 1 cut(s) | 110 |
| BsiSI | CCGG | 2 cut(s) | 984, 1190 |
| BslFI | GGGAC | 2 cut(s) | 965, 987 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 73, 161, 278, 608, 814, 1055 |
| BsmAI | GTCTC | 2 cut(s) | 115, 818 |
| BsmBI | CGTCTC | 1 cut(s) | 818 |
| BsmFI | GGGAC | 2 cut(s) | 965, 987 |
| BsnI | GGCC | 5 cut(s) | 109, 302, 587, 1167, 1366 |
| Bso31I | GGTCTC | 1 cut(s) | 115 |
| BsoBI | CYCGRG | 1 cut(s) | 110 |
| Bsp120I | GGGCCC | 1 cut(s) | 107 |
| Bsp1286I | GDGCHC | 1 cut(s) | 111 |
| Bsp13I | TCCGGA | 1 cut(s) | 1189 |
| Bsp143I | GATC | 3 cut(s) | 662, 1207, 1275 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 56 |
| BspACI | CCGC | 2 cut(s) | 60, 589 |
| BspANI | GGCC | 5 cut(s) | 109, 302, 587, 1167, 1366 |
| BspCNI | CTCAG | 3 cut(s) | 64, 707, 909 |
| BspEI | TCCGGA | 1 cut(s) | 1189 |
| BspHI | TCATGA | 1 cut(s) | 784 |
| BspLI | GGNNCC | 3 cut(s) | 109, 1200, 1365 |
| BspPI | GGATC | 1 cut(s) | 1270 |
| BspQI | GCTCTTC | 1 cut(s) | 345 |
| BspTNI | GGTCTC | 1 cut(s) | 115 |
| BsrI | ACTGG | 3 cut(s) | 754, 864, 961 |
| BssECI | CCNNGG | 7 cut(s) | 96, 155, 303, 446, 982, 1168, 1279 |
| BssMI | GATC | 3 cut(s) | 662, 1207, 1275 |
| BssT1I | CCWWGG | 4 cut(s) | 96, 303, 446, 1168 |
| Bst2UI | CCWGG | 3 cut(s) | 156, 568, 603 |
| Bst4CI | ACNGT | 3 cut(s) | 168, 217, 365 |
| Bst6I | CTCTTC | 1 cut(s) | 345 |
| BstC8I | GCNNGC | 6 cut(s) | 552, 589, 1095, 1250, 1254, 1421 |
| BstDEI | CTNAG | 4 cut(s) | 56, 72, 694, 896 |
| BstDSI | CCRYGG | 1 cut(s) | 1279 |
| BstF5I | GGATG | 5 cut(s) | 343, 441, 559, 804, 1186 |
| BstKTI | GATC | 3 cut(s) | 665, 1210, 1278 |
| BstMAI | GTCTC | 2 cut(s) | 115, 818 |
| BstMBI | GATC | 3 cut(s) | 662, 1207, 1275 |
| BstNI | CCWGG | 3 cut(s) | 156, 568, 603 |
| BstNSI | RCATGY | 3 cut(s) | 980, 1252, 1256 |
| BstSCI | CCNGG | 4 cut(s) | 154, 566, 601, 982 |
| BstSFI | CTRYAG | 1 cut(s) | 361 |
| BstSLI | GKGCMC | 1 cut(s) | 111 |
| BstV1I | GCAGC | 4 cut(s) | 34, 786, 789, 904 |
| BstV2I | GAAGAC | 1 cut(s) | 749 |
| BstX2I | RGATCY | 1 cut(s) | 662 |
| BstYI | RGATCY | 1 cut(s) | 662 |
| BsuRI | GGCC | 5 cut(s) | 109, 302, 587, 1167, 1366 |
| BtgI | CCRYGG | 1 cut(s) | 1279 |
| BtgZI | GCGATG | 1 cut(s) | 1014 |
| BtsCI | GGATG | 5 cut(s) | 343, 441, 559, 804, 1186 |
| BtsIMutI | CAGTG | 1 cut(s) | 370 |
| Cac8I | GCNNGC | 6 cut(s) | 552, 589, 1095, 1250, 1254, 1421 |
| CciI | TCATGA | 1 cut(s) | 784 |
| Cfr13I | GGNCC | 5 cut(s) | 107, 108, 586, 1165, 1364 |
| Csp6I | GTAC | 1 cut(s) | 186 |
| CviAII | CATG | 7 cut(s) | 211, 785, 866, 977, 1249, 1253, 1370 |
| CviQI | GTAC | 1 cut(s) | 186 |
| DdeI | CTNAG | 4 cut(s) | 56, 72, 694, 896 |
| DpnI | GATC | 3 cut(s) | 664, 1209, 1277 |
| DpnII | GATC | 3 cut(s) | 662, 1207, 1275 |
| DraI | TTTAAA | 1 cut(s) | 912 |
| DriI | GACNNNNNGTC | 1 cut(s) | 831 |
| Eam1104I | CTCTTC | 1 cut(s) | 345 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 831 |
| EarI | CTCTTC | 1 cut(s) | 345 |
| Eco130I | CCWWGG | 4 cut(s) | 96, 303, 446, 1168 |
| Eco24I | GRGCYC | 1 cut(s) | 111 |
| Eco31I | GGTCTC | 1 cut(s) | 115 |
| Eco57I | CTGAAG | 3 cut(s) | 162, 635, 1224 |
| Eco88I | CYCGRG | 1 cut(s) | 110 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1364 |
| EcoRI | GAATTC | 1 cut(s) | 1147 |
| EcoRII | CCWGG | 3 cut(s) | 154, 566, 601 |
| EcoT14I | CCWWGG | 4 cut(s) | 96, 303, 446, 1168 |
| EcoT22I | ATGCAT | 2 cut(s) | 1188, 1254 |
| EcoT38I | GRGCYC | 1 cut(s) | 111 |
| ErhI | CCWWGG | 4 cut(s) | 96, 303, 446, 1168 |
| Esp3I | CGTCTC | 1 cut(s) | 818 |
| FaeI | CATG | 7 cut(s) | 214, 788, 869, 980, 1252, 1256, 1373 |
| FaqI | GGGAC | 2 cut(s) | 965, 987 |
| FatI | CATG | 7 cut(s) | 210, 784, 865, 976, 1248, 1252, 1369 |
| FauI | CCCGC | 1 cut(s) | 596 |
| FblI | GTMKAC | 1 cut(s) | 853 |
| Fnu4HI | GCNGC | 4 cut(s) | 23, 775, 778, 918 |
| FokI | GGATG | 5 cut(s) | 350, 448, 546, 791, 1173 |
| FriOI | GRGCYC | 1 cut(s) | 111 |
| Fsp4HI | GCNGC | 4 cut(s) | 23, 775, 778, 918 |
| FspBI | CTAG | 6 cut(s) | 414, 656, 765, 771, 1101, 1397 |
| GluI | GCNGC | 4 cut(s) | 23, 775, 778, 918 |
| HaeIII | GGCC | 5 cut(s) | 109, 302, 587, 1167, 1366 |
| HapII | CCGG | 2 cut(s) | 984, 1190 |
| Hin1II | CATG | 7 cut(s) | 214, 788, 869, 980, 1252, 1256, 1373 |
| HindIII | AAGCTT | 3 cut(s) | 647, 1214, 1376 |
| HinfI | GANTC | 5 cut(s) | 32, 641, 925, 1261, 1289 |
| HpaII | CCGG | 2 cut(s) | 984, 1190 |
| HphI | GGTGA | 2 cut(s) | 829, 1037 |
| Hpy166II | GTNNAC | 2 cut(s) | 164, 854 |
| Hpy188III | TCNNGA | 7 cut(s) | 39, 143, 260, 344, 785, 931, 1190 |
| Hpy8I | GTNNAC | 2 cut(s) | 164, 854 |
| HpyAV | CCTTC | 8 cut(s) | 568, 573, 791, 875, 894, 928, 932, 1348 |
| HpyCH4III | ACNGT | 3 cut(s) | 168, 217, 365 |
| HpyCH4IV | ACGT | 2 cut(s) | 442, 827 |
| HpyF3I | CTNAG | 4 cut(s) | 56, 72, 694, 896 |
| HpySE526I | ACGT | 2 cut(s) | 442, 827 |
| Hsp92II | CATG | 7 cut(s) | 214, 788, 869, 980, 1252, 1256, 1373 |
| Kpn2I | TCCGGA | 1 cut(s) | 1189 |
| Kzo9I | GATC | 3 cut(s) | 662, 1207, 1275 |
| LguI | GCTCTTC | 1 cut(s) | 345 |
| Lsp1109I | GCAGC | 4 cut(s) | 34, 786, 789, 904 |
| LweI | GCATC | 7 cut(s) | 563, 661, 790, 1080, 1121, 1173, 1195 |
| MaeI | CTAG | 6 cut(s) | 414, 656, 765, 771, 1101, 1397 |
| MaeII | ACGT | 2 cut(s) | 442, 827 |
| MaeIII | GTNAC | 2 cut(s) | 143, 817 |
| MalI | GATC | 3 cut(s) | 664, 1209, 1277 |
| MboI | GATC | 3 cut(s) | 662, 1207, 1275 |
| MboII | GAAGA | 9 cut(s) | 99, 362, 506, 509, 754, 1099, 1217, 1252, 1314 |
| MfeI | CAATTG | 1 cut(s) | 45 |
| MflI | RGATCY | 1 cut(s) | 662 |
| MhlI | GDGCHC | 1 cut(s) | 111 |
| MluCI | AATT | 9 cut(s) | 45, 368, 472, 521, 534, 1004, 1141, 1147, 1404 |
| MlyI | GAGTC | 1 cut(s) | 1255 |
| MmeI | TCCRAC | 2 cut(s) | 9, 1331 |
| Mph1103I | ATGCAT | 2 cut(s) | 1188, 1254 |
| MroI | TCCGGA | 1 cut(s) | 1189 |
| MroXI | GAANNNNTTC | 2 cut(s) | 255, 354 |
| MseI | TTAA | 2 cut(s) | 911, 1026 |
| MslI | CAYNNNNRTG | 4 cut(s) | 203, 215, 274, 363 |
| MspI | CCGG | 2 cut(s) | 984, 1190 |
| MspR9I | CCNGG | 4 cut(s) | 156, 568, 603, 984 |
| MunI | CAATTG | 1 cut(s) | 45 |
| MvaI | CCWGG | 3 cut(s) | 156, 568, 603 |
| NciI | CCSGG | 1 cut(s) | 984 |
| NdeII | GATC | 3 cut(s) | 662, 1207, 1275 |
| NlaIII | CATG | 7 cut(s) | 214, 788, 869, 980, 1252, 1256, 1373 |
| NlaIV | GGNNCC | 3 cut(s) | 109, 1200, 1365 |
| NmuCI | GTSAC | 2 cut(s) | 143, 817 |
| NsiI | ATGCAT | 2 cut(s) | 1188, 1254 |
| NspI | RCATGY | 3 cut(s) | 980, 1252, 1256 |
| OliI | CACNNNNGTG | 1 cut(s) | 363 |
| PaeI | GCATGC | 2 cut(s) | 1252, 1256 |
| PagI | TCATGA | 1 cut(s) | 784 |
| PciI | ACATGT | 1 cut(s) | 976 |
| PciSI | GCTCTTC | 1 cut(s) | 345 |
| PdmI | GAANNNNTTC | 2 cut(s) | 255, 354 |
| PfeI | GAWTC | 4 cut(s) | 32, 641, 925, 1289 |
| PkrI | GCNGC | 4 cut(s) | 24, 776, 779, 919 |
| PleI | GAGTC | 1 cut(s) | 1255 |
| PpsI | GAGTC | 1 cut(s) | 1255 |
| PscI | ACATGT | 1 cut(s) | 976 |
| Psp6I | CCWGG | 3 cut(s) | 154, 566, 601 |
| PspGI | CCWGG | 3 cut(s) | 154, 566, 601 |
| PspN4I | GGNNCC | 3 cut(s) | 109, 1200, 1365 |
| PspOMI | GGGCCC | 1 cut(s) | 107 |
| PspPI | GGNCC | 5 cut(s) | 107, 108, 586, 1165, 1364 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 240, 272 |
| PsuI | RGATCY | 1 cut(s) | 662 |
| RsaI | GTAC | 1 cut(s) | 187 |
| RsaNI | GTAC | 1 cut(s) | 186 |
| RseI | CAYNNNNRTG | 4 cut(s) | 203, 215, 274, 363 |
| SapI | GCTCTTC | 1 cut(s) | 345 |
| SaqAI | TTAA | 2 cut(s) | 911, 1026 |
| SatI | GCNGC | 4 cut(s) | 23, 775, 778, 918 |
| Sau3AI | GATC | 3 cut(s) | 662, 1207, 1275 |
| Sau96I | GGNCC | 5 cut(s) | 107, 108, 586, 1165, 1364 |
| SchI | GAGTC | 1 cut(s) | 1255 |
| ScrFI | CCNGG | 4 cut(s) | 156, 568, 603, 984 |
| SduI | GDGCHC | 1 cut(s) | 111 |
| SfaNI | GCATC | 7 cut(s) | 563, 661, 790, 1080, 1121, 1173, 1195 |
| SfcI | CTRYAG | 1 cut(s) | 361 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 203, 215, 274, 363 |
| SmlI | CTYRAG | 3 cut(s) | 387, 929, 1053 |
| SmoI | CTYRAG | 3 cut(s) | 387, 929, 1053 |
| SpeI | ACTAGT | 1 cut(s) | 1100 |
| SphI | GCATGC | 2 cut(s) | 1252, 1256 |
| Sse9I | AATT | 9 cut(s) | 45, 368, 472, 521, 534, 1004, 1141, 1147, 1404 |
| SsiI | CCGC | 2 cut(s) | 60, 589 |
| SspI | AATATT | 3 cut(s) | 724, 1030, 1313 |
| SspMI | CTAG | 6 cut(s) | 414, 656, 765, 771, 1101, 1397 |
| StyD4I | CCNGG | 4 cut(s) | 154, 566, 601, 982 |
| StyI | CCWWGG | 4 cut(s) | 96, 303, 446, 1168 |
| TaaI | ACNGT | 3 cut(s) | 168, 217, 365 |
| TaiI | ACGT | 2 cut(s) | 445, 830 |
| TaqI | TCGA | 3 cut(s) | 38, 297, 906 |
| TasI | AATT | 9 cut(s) | 45, 368, 472, 521, 534, 1004, 1141, 1147, 1404 |
| TfiI | GAWTC | 4 cut(s) | 32, 641, 925, 1289 |
| Tru1I | TTAA | 2 cut(s) | 911, 1026 |
| Tru9I | TTAA | 2 cut(s) | 911, 1026 |
| TscAI | CASTG | 1 cut(s) | 370 |
| TseFI | GTSAC | 2 cut(s) | 143, 817 |
| TseI | GCWGC | 4 cut(s) | 22, 774, 777, 917 |
| Tsp45I | GTSAC | 2 cut(s) | 143, 817 |
| TspDTI | ATGAA | 5 cut(s) | 363, 716, 773, 998, 1017 |
| TspGWI | ACGGA | 2 cut(s) | 445, 1268 |
| TspRI | CASTG | 1 cut(s) | 370 |
| XapI | RAATTY | 2 cut(s) | 1004, 1147 |
| XceI | RCATGY | 3 cut(s) | 980, 1252, 1256 |
| XmiI | GTMKAC | 1 cut(s) | 853 |
| XmnI | GAANNNNTTC | 2 cut(s) | 255, 354 |
| XspI | CTAG | 6 cut(s) | 414, 656, 765, 771, 1101, 1397 |
| Zsp2I | ATGCAT | 2 cut(s) | 1188, 1254 |