Rroxscaffold_3G00244060

histone-lysine N-methyltransferase, H3 lysine-9 specific

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
Physical Location & Seq
Reverse (-)
36475473 .. 36480968
5496 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00244060.1

Sequence Viewer

Length: 2643 bp
ATGGGGGTTGTGGAGGCGAACCCGCATTTGGACTCATCATCTAGGACAGTAGCATCACTTAATGGCAGTCACTCTGAAGCAAGATTGGGCAAGAAGCCAATGGAAGTTGGTGAGTGTTCTTACCGCCCCAGTTCGGCTAAGATTAAGAGGCGAATAGTCTCTGCTGTTCGTGATTTTCCACCGGGTTGTGGAAGAAATGTTCCCTTAAACAATGCCTTTGCTGGTACTTCTCAGAATGTACCAATAGAGGGTACCAGTGAATTGGAAGCTTTTGTTGGTGCTTCTCAGAGTGTACCGATAGAAAACTTGGTTGCTGGGGATAGAATTGATGATGGGAATGAAGTGGATGATAGTGGCTTGATGAATATGGAGCCAGTTGTGAGAGGAACAGCCTTAGAAGATGAAGAATTTGATTTACGGGAGAATCCGCATCAGTTAAGCAACAATTTGACAATTGTTGAAGGGGCAGGTCCTGTTGGTACTAATGATCAGGCTGAGAAGTTGATTAGCGGGGATAGAACTGATGATGGACAAAAAGTTGTGAACTTGATCCTCTCAGCTGGTCAGGTGGGTGGTGATTCTGACTTGATGAATAGGGCTGTTGGTACTGTGGAAACAGTTGAATTAACAGCCCTAAAGCATGAAGTATCTGATTTGTCAATGAACCCTCATCTGGTGTGTGTGGCTACACCGGATGAAGAGATGGTTCCTGTGCTGTCAAATAGAAACTCTTCTTCCATTTCAGTTTCTAATGTCAATGGTCAGGAAAAGACTGCAGCTAGAAGATATCCTCCTCGAAGACATGTCTCAGCTGTTCGGGACTTCCCTCCTTTTTGCGGAAGGAATGCTGCCACGGAGGCCAGGAATTTTGGTGAAGAGCAGTCGGATATGGGTGACAAACCATCCTCATCAAATATGAATACCATCATGCAACAAGCCAGAGAGGATGGTGTTCAGGAGGAAGAGTTTCACGAGAATGAATTGGGAGGGAATGTTTCTGAAGTAACCGGAGGTGGAGTTCAAACTGAATACAAGGGACATGCCGTAGAAGAAATGGAGAGAAAAGATCAATGCATAGTATATTCTGGGATCAATGAGGTTTTGGAAGATACAAGAAAAGATGACACTGAACCTCAAGGAAGCAATGGATGTCAAGGGATGAGGGAGGATGTTGAACATTCAGAGAAGAAAGTGGGGAATCAGATTGTGGTATACCATGAGAAGAACAGTCGAGGGCGAAATAGTCAAAAAAGTAGGGTGATTGTACTGGGTTTGATGGCTGCATCAAATTGTGGTATGAGTGAAAGCAAACAGAAGAAACGAGATGGTGGTATGAGTGGAAGAAAACGGAAGAAAACAGATGGTATGAGTGAAAGAAAACAGAAGAAACCAGTTGGTGGTGTAAGTGAATGCAAACTGAAAACACCTGATTTTAAATCAGAAGGATCTAATTCTACTCCCCAAGGTACAAGCCAGCAGCTTGTTATTATGGATGAGGATGTGATTCCAATATCATGTTATACACATGTGTGCCCTCCTCCTTTTGGTCAGAGTAGTTTAAGCAATGAAGTTCGTGATGATGGTGCAATTGTCACCCGAAACAAGGTGAGGGAGACATTGCGGCTTTTTCAAGCTGTTTATAGGAAGCTCTTGCAGGAGGATGAAGCGAAGTCAAAGGAAGGAGGCAACTCCCGCAGAAGGTTTGATCTTCAAGCAGCAAAGATCCTCAAGGAAAATGGAAAATATGTAAATCTTGGCAAACAAATCTTGGGAGCTGTTCCAGGAGTGGAAGTCGGTGATGAGTTTCATTATAGAGTGGAACTTAATATGATTGGCCTACACCGCCAAATTCAAGGTGGTATAGATTATGTTAGGCATGGGGGGACAATCCTTGCTACCAGTATTGTTGCATCAGGGGGGTATGCTGATGCTTTGGATAATTCAAGTTCCTTGATTTATACGGGCCAAGGAGGAAATGTGATAAATACAGAAAAGGAACCTGAAGATCAGAAGCTTGAACGGGGAAACCTTGCTTTGAAGAATAGTCTGCATGAAAAGAATCCTGTTAGAGTGATTCGTGGGTCTGAATCATCAGATGGAAAATCTAGGACGTATGTCTATGACGGGCTATATTTGGTAGAGAAATGTTGGCAAGATTTGGGGCCTCATAATAAGCTGGTTTATAAGTTTCAGCTGGACAGAATTGGGGGTCAACCAGAGCTTGCTTGGAAAGAACTGAAGAAGTCCAAAAAATTTCAAATACGTGAAGGTATCTGTGTCGATGATATTTCAGGAGGCAAAGAGTCAATTCCTATCTGTGCTATGAATACCATAGACGATGAGAAACCTCCATCATTCGAATACATAACTAGTGTGATATATCCTGATTGGTGCCGCCCGCTTCCTTCCAAGGGTTGTAGCTGTACTGCTGGATGCTCAGACTCTGAGAAATGTTCTTGTGCAGTTAAGAATGGAGGTGAGATCCCATTTAACTTTAATGGGGCTATTGTTGAAGCTAAGCCCCTTGTGTATGAGTGTGGTCCTTCTTGCAAGTGTCCTCCTTCTTGCCATAATAGAGTTAGCCAGTATGGTATCAAGTTTCATCTTGAAATTTTTAAAACTAAATCAATGGGATGGGGGTGA

Protein Analysis

880

Amino Acids

96.15

Weight (kDa)

5.74

Isoelectric Point (pI)

41.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SAD_SRA PF02182 590 - 738 1.2e-52 SAD/SRA domain
Pre-SET PF05033 765 - 859 1.3e-22 Pre-SET motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000355)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G22740 AT2G22740 AT2G35160 AT2G35160 AT2G35160 AT2G35160 AT2G35160
fragaria_vesca FvH4_5g20100 FvH4_5g20130 FvH4_5g20130 FvH4_5g20130 FvH4_5g20130 FvH4_5g20130 FvH4_5g20150 FvH4_5g25380 FvH4_5g30731 FvH4_5g30740
malus_domestica MD03G1258900.v1.1 MD04G1052400.v1.1 MD11G1279700.v1.1
prunus_persica Prupe.2G064400_v2.0.a1 Prupe.5G057000_v2.0.a1 Prupe.5G057400_v2.0.a1
pyrus_communis pycom03g20690 pycom04g04620 pycom11g24730
rosa_chinensis RchiOBHm_Chr7g0204991 RchiOBHm_Chr7g0205081 RchiOBHm_Chr7g0205121 RchiOBHm_Chr7g0205131 RchiOBHm_Chr7g0215601 RchiOBHm_Chr7g0225631
rosa_laevigata RLG00000001799 RLG00000002623 RLG00000002644 RLG00000003398 RLG00000003403 RLG00000003417 RLG00000034641
rosa_multiflora Rmu_co8235369.1_g000001 Rmu_co8353775.1_g000001 Rmu_co8458607.1_g000001 Rmu_sc0000898.1_g000043 Rmu_sc0000898.1_g000048 Rmu_sc0001072.1_g000001 Rmu_sc0001072.1_g000002 Rmu_sc0003876.1_g000010 Rmu_sc0005112.1_g000021 Rmu_sc0007602.1_g000010 Rmu_sc0009349.1_g000014 Rmu_sc0020855.1_g000001 Rmu_sc0023402.1_g000001 Rmu_sc0024226.1_g000004
rosa_roxburghii Rroxscaffold_3G00233620 Rroxscaffold_3G00244060 Rroxscaffold_3G00252560 Rroxscaffold_3G00252590 Rroxscaffold_3G00252620
rosa_rugosa Rorug07G0086900 Rorug07G0087000 Rorug07G0087000 Rorug07G0087400 Rorug07G0087500 Rorug07G0087600 Rorug07G0087700 Rorug07G0087800 Rorug07G0088100 Rorug07G0095600.1 Rorug07G0095700.1 Rorug07G0095800.1 Rorug07G0095900 Rorug07G0096000 Rorug07G0096100 Rorug07G0155000 Rorug07G0232100
rosa_samantha Rh7AG217900 Rh7AG218400 Rh7AG219000 Rh7AG291200 Rh7AG371700 Rh7BG214800 Rh7BG215000 Rh7BG215500 Rh7BG223800 Rh7BG224400 Rh7BG283300 Rh7BG283800 Rh7BG366000 Rh7CG231100 Rh7CG231600 Rh7CG232000 Rh7CG241100 Rh7CG311200 Rh7CG390400 Rh7DG225200 Rh7DG225900 Rh7DG226400 Rh7DG295000 Rh7DG376800
rosa_wichuraiana Rw0G004730 Rw7G018880 Rw7G018900 Rw7G018920 Rw7G018940 Rw7G018960 Rw7G024860 Rw7G031790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2184
Acc36I ACCTGC 1 cut(s) 458
Acc65I GGTACC 1 cut(s) 251
AccB1I GGYRCC 2 cut(s) 251, 2391
AccB7I CCANNNNNTGG 1 cut(s) 1397
AccI GTMKAC 1 cut(s) 1212
AclWI GGATC 5 cut(s) 544, 1097, 1453, 1717, 2476
AcsI RAATTY 5 cut(s) 407, 865, 1848, 2252, 2610
AcuI CTGAAG 4 cut(s) 96, 1020, 2022, 2258
AfaI GTAC 9 cut(s) 226, 240, 253, 294, 481, 607, 1266, 1468, 2425
AflIII ACRYGT 2 cut(s) 802, 1525
AhlI ACTAGT 1 cut(s) 2369
AjnI CCWGG 2 cut(s) 860, 1780
AjuI GAANNNNNNNTTGG 4 cut(s) 11, 43, 258, 290
AleI CACNNNNGTG 1 cut(s) 1528
AloI GAACNNNNNNTCC 4 cut(s) 183, 215, 1002, 1034
Alw26I GTCTC 3 cut(s) 163, 811, 1607
AlwI GGATC 5 cut(s) 544, 1097, 1453, 1717, 2476
AlwNI CAGNNNCTG 2 cut(s) 473, 2444
AoxI GGCC 4 cut(s) 858, 1834, 1963, 2162
ApeKI GCWGC 5 cut(s) 776, 848, 1280, 1477, 1715
ApoI RAATTY 5 cut(s) 407, 865, 1848, 2252, 2610
Asp700I GAANNNNTTC 2 cut(s) 730, 966
Asp718I GGTACC 1 cut(s) 251
AspS9I GGNCC 4 cut(s) 470, 1963, 2162, 2540
AsuC2I CCSGG 1 cut(s) 183
AsuHPI GGTGA 9 cut(s) 122, 587, 884, 905, 1270, 1585, 1618, 1808, 2489
AsuII TTCGAA 1 cut(s) 2358
AvaII GGWCC 2 cut(s) 470, 2540
BaeGI GKGCMC 1 cut(s) 1535
BanI GGYRCC 2 cut(s) 251, 2391
BauI CACGAG 1 cut(s) 971
BbsI GAAGAC 1 cut(s) 805
BbvI GCAGC 5 cut(s) 788, 835, 1267, 1489, 1727
BceAI ACGGC 1 cut(s) 1028
BciT130I CCWGG 2 cut(s) 862, 1782
BclI TGATCA 1 cut(s) 487
BcnI CCSGG 1 cut(s) 183
BcoDI GTCTC 3 cut(s) 163, 811, 1607
BcuI ACTAGT 1 cut(s) 2369
BfaI CTAG 4 cut(s) 42, 780, 2106, 2370
BfmI CTRYAG 1 cut(s) 774
BfuAI ACCTGC 1 cut(s) 458
BglI GCCNNNNNGGC 1 cut(s) 857
BisI GCNGC 7 cut(s) 777, 849, 1281, 1478, 1622, 1716, 2395
BlpI GCTNAGC 1 cut(s) 2517
BlsI GCNGC 7 cut(s) 778, 850, 1282, 1479, 1623, 1717, 2396
Bme1390I CCNGG 3 cut(s) 183, 862, 1782
Bme18I GGWCC 2 cut(s) 470, 2540
BmgT120I GGNCC 4 cut(s) 470, 1963, 2162, 2540
BmiI GGNNCC 6 cut(s) 253, 372, 708, 1998, 2163, 2393
BmrFI CCNGG 3 cut(s) 183, 862, 1782
BmrI ACTGGG 2 cut(s) 123, 1277
BmsI GCATC 6 cut(s) 62, 439, 1292, 1918, 1919, 2423
BmuI ACTGGG 2 cut(s) 123, 1277
BoxI GACNNNNGTC 1 cut(s) 2114
BpiI GAAGAC 1 cut(s) 805
Bpu1102I GCTNAGC 1 cut(s) 2517
Bpu14I TTCGAA 1 cut(s) 2358
BpuEI CTTGAG 2 cut(s) 1119, 1712
BpuMI CCSGG 1 cut(s) 183
BsaAI YACGTR 1 cut(s) 2264
BsaJI CCNNGG 4 cut(s) 852, 1462, 1966, 2409
BsaWI WCCGGW 2 cut(s) 691, 1007
Bse1I ACTGG 7 cut(s) 129, 255, 374, 1272, 1391, 1899, 2584
Bse3DI GCAATG 3 cut(s) 1150, 1570, 1616
BseBI CCWGG 2 cut(s) 862, 1782
BseDI CCNNGG 4 cut(s) 852, 1462, 1966, 2409
BseMI GCAATG 3 cut(s) 1150, 1570, 1616
BseMII CTCAG 7 cut(s) 245, 299, 486, 570, 822, 2436, 2451
BseNI ACTGG 7 cut(s) 129, 255, 374, 1272, 1391, 1899, 2584
BseRI GAGGAG 2 cut(s) 783, 1527
BseSI GKGCMC 1 cut(s) 1535
BseXI GCAGC 5 cut(s) 788, 835, 1267, 1489, 1727
BseYI CCCAGC 1 cut(s) 314
BsgI GTGCAG 1 cut(s) 2481
BshFI GGCC 4 cut(s) 860, 1836, 1965, 2164
BshNI GGYRCC 2 cut(s) 251, 2391
BsiSI CCGG 3 cut(s) 182, 692, 1008
BslFI GGGAC 3 cut(s) 833, 1050, 1897
BsmAI GTCTC 3 cut(s) 163, 811, 1607
BsmFI GGGAC 3 cut(s) 833, 1050, 1897
BsmI GAATGC 2 cut(s) 850, 1415
BsnI GGCC 4 cut(s) 860, 1836, 1965, 2164
Bsp119I TTCGAA 1 cut(s) 2358
Bsp1286I GDGCHC 1 cut(s) 1535
Bsp143I GATC 9 cut(s) 487, 549, 1066, 1089, 1445, 1705, 1722, 2005, 2481
Bsp1720I GCTNAGC 1 cut(s) 2517
BspANI GGCC 4 cut(s) 860, 1836, 1965, 2164
BspCNI CTCAG 7 cut(s) 244, 298, 487, 569, 821, 2437, 2450
BspLI GGNNCC 6 cut(s) 253, 372, 708, 1998, 2163, 2393
BspMAI CTGCAG 1 cut(s) 778
BspMI ACCTGC 1 cut(s) 458
BspPI GGATC 5 cut(s) 544, 1097, 1453, 1717, 2476
BspQI GCTCTTC 1 cut(s) 870
BspT104I TTCGAA 1 cut(s) 2358
BspT107I GGYRCC 2 cut(s) 251, 2391
BsrDI GCAATG 3 cut(s) 1150, 1570, 1616
BsrI ACTGG 7 cut(s) 129, 255, 374, 1272, 1391, 1899, 2584
BssECI CCNNGG 4 cut(s) 852, 1462, 1966, 2409
BssMI GATC 9 cut(s) 487, 549, 1066, 1089, 1445, 1705, 1722, 2005, 2481
BssNAI GTATAC 1 cut(s) 1213
BssSI CACGAG 1 cut(s) 971
BssT1I CCWWGG 3 cut(s) 1462, 1966, 2409
Bst1107I GTATAC 1 cut(s) 1213
Bst2BI CACGAG 1 cut(s) 971
Bst2UI CCWGG 2 cut(s) 862, 1782
Bst4CI ACNGT 4 cut(s) 49, 610, 619, 1229
Bst6I CTCTTC 4 cut(s) 693, 736, 870, 957
BstBAI YACGTR 1 cut(s) 2264
BstBI TTCGAA 1 cut(s) 2358
BstC8I GCNNGC 3 cut(s) 1475, 2223, 2399
BstDSI CCRYGG 1 cut(s) 852
BstKTI GATC 9 cut(s) 490, 552, 1069, 1092, 1448, 1708, 1725, 2008, 2484
BstMAI GTCTC 3 cut(s) 163, 811, 1607
BstMBI GATC 9 cut(s) 487, 549, 1066, 1089, 1445, 1705, 1722, 2005, 2481
BstMWI GCNNNNNNNGC 3 cut(s) 857, 1692, 1842
BstNI CCWGG 2 cut(s) 862, 1782
BstNSI RCATGY 3 cut(s) 806, 1043, 1529
BstPAI GACNNNNGTC 1 cut(s) 2114
BstSCI CCNGG 3 cut(s) 181, 860, 1780
BstSFI CTRYAG 1 cut(s) 774
BstSLI GKGCMC 1 cut(s) 1535
BstV1I GCAGC 5 cut(s) 788, 835, 1267, 1489, 1727
BstV2I GAAGAC 1 cut(s) 805
BstX2I RGATCY 3 cut(s) 1445, 1722, 2481
BstXI CCANNNNNNTGG 1 cut(s) 262
BstYI RGATCY 3 cut(s) 1445, 1722, 2481
BstZ17I GTATAC 1 cut(s) 1213
BsuRI GGCC 4 cut(s) 860, 1836, 1965, 2164
BtgI CCRYGG 1 cut(s) 852
BtsIMutI CAGTG 2 cut(s) 262, 1125
BveI ACCTGC 1 cut(s) 458
Cac8I GCNNGC 3 cut(s) 1475, 2223, 2399
CaiI CAGNNNCTG 2 cut(s) 473, 2444
Cfr13I GGNCC 4 cut(s) 470, 1963, 2162, 2540
Csp6I GTAC 9 cut(s) 225, 239, 252, 293, 480, 606, 1265, 1467, 2424
CviAII CATG 9 cut(s) 641, 803, 928, 1040, 1217, 1515, 1526, 1877, 2051
CviQI GTAC 9 cut(s) 225, 239, 252, 293, 480, 606, 1265, 1467, 2424
DpnI GATC 9 cut(s) 489, 551, 1068, 1091, 1447, 1707, 1724, 2007, 2483
DpnII GATC 9 cut(s) 487, 549, 1066, 1089, 1445, 1705, 1722, 2005, 2481
DraI TTTAAA 2 cut(s) 1435, 2617
Eam1104I CTCTTC 4 cut(s) 693, 736, 870, 957
EarI CTCTTC 4 cut(s) 693, 736, 870, 957
Eco130I CCWWGG 3 cut(s) 1462, 1966, 2409
Eco32I GATATC 1 cut(s) 788
Eco47I GGWCC 2 cut(s) 470, 2540
Eco57I CTGAAG 4 cut(s) 96, 1020, 2022, 2258
EcoO109I RGGNCCY 2 cut(s) 470, 2162
EcoRII CCWGG 2 cut(s) 860, 1780
EcoRV GATATC 1 cut(s) 788
EcoT14I CCWWGG 3 cut(s) 1462, 1966, 2409
EcoT22I ATGCAT 1 cut(s) 1076
ErhI CCWWGG 3 cut(s) 1462, 1966, 2409
FaeI CATG 9 cut(s) 644, 806, 931, 1043, 1220, 1518, 1529, 1880, 2054
FaqI GGGAC 3 cut(s) 833, 1050, 1897
FatI CATG 9 cut(s) 640, 802, 927, 1039, 1216, 1514, 1525, 1876, 2050
FauI CCCGC 4 cut(s) 30, 503, 1700, 2406
FbaI TGATCA 1 cut(s) 487
FblI GTMKAC 1 cut(s) 1212
Fnu4HI GCNGC 7 cut(s) 777, 849, 1281, 1478, 1622, 1716, 2395
Fsp4HI GCNGC 7 cut(s) 777, 849, 1281, 1478, 1622, 1716, 2395
FspBI CTAG 4 cut(s) 42, 780, 2106, 2370
GluI GCNGC 7 cut(s) 777, 849, 1281, 1478, 1622, 1716, 2395
GsaI CCCAGC 1 cut(s) 318
HaeIII GGCC 4 cut(s) 860, 1836, 1965, 2164
HapII CCGG 3 cut(s) 182, 692, 1008
Hin1II CATG 9 cut(s) 644, 806, 931, 1043, 1220, 1518, 1529, 1880, 2054
HincII GTYRAC 1 cut(s) 2213
HindII GTYRAC 1 cut(s) 2213
HindIII AAGCTT 2 cut(s) 267, 2012
HpaII CCGG 3 cut(s) 182, 692, 1008
HphI GGTGA 9 cut(s) 122, 587, 884, 905, 1270, 1585, 1618, 1808, 2489
Hpy166II GTNNAC 4 cut(s) 293, 544, 1213, 2213
Hpy188III TCNNGA 9 cut(s) 170, 764, 818, 956, 971, 1574, 2292, 2384, 2606
Hpy8I GTNNAC 4 cut(s) 293, 544, 1213, 2213
HpyAV CCTTC 9 cut(s) 455, 834, 1436, 1673, 1692, 2261, 2415, 2553, 2571
HpyCH4III ACNGT 4 cut(s) 49, 610, 619, 1229
HpyCH4IV ACGT 2 cut(s) 2111, 2263
HpyF10VI GCNNNNNNNGC 3 cut(s) 857, 1692, 1842
HpySE526I ACGT 2 cut(s) 2111, 2263
Hsp92II CATG 9 cut(s) 644, 806, 931, 1043, 1220, 1518, 1529, 1880, 2054
KpnI GGTACC 1 cut(s) 255
Ksp22I TGATCA 1 cut(s) 487
Kzo9I GATC 9 cut(s) 487, 549, 1066, 1089, 1445, 1705, 1722, 2005, 2481
LguI GCTCTTC 1 cut(s) 870
LmnI GCTCC 2 cut(s) 370, 1772
Lsp1109I GCAGC 5 cut(s) 788, 835, 1267, 1489, 1727
LweI GCATC 6 cut(s) 62, 439, 1292, 1918, 1919, 2423
MaeI CTAG 4 cut(s) 42, 780, 2106, 2370
MaeII ACGT 2 cut(s) 2111, 2263
MaeIII GTNAC 4 cut(s) 68, 893, 1003, 1591
MalI GATC 9 cut(s) 489, 551, 1068, 1091, 1447, 1707, 1724, 2007, 2483
MboI GATC 9 cut(s) 487, 549, 1066, 1089, 1445, 1705, 1722, 2005, 2481
MfeI CAATTG 2 cut(s) 453, 1587
MflI RGATCY 3 cut(s) 1445, 1722, 2481
MhlI GDGCHC 1 cut(s) 1535
MlyI GAGTC 3 cut(s) 26, 2312, 2435
MmeI TCCRAC 1 cut(s) 864
Mph1103I ATGCAT 1 cut(s) 1076
MroXI GAANNNNTTC 2 cut(s) 730, 966
MslI CAYNNNNRTG 2 cut(s) 975, 1528
MspA1I CMGCKG 3 cut(s) 560, 812, 2194
MspI CCGG 3 cut(s) 182, 692, 1008
MspR9I CCNGG 3 cut(s) 183, 862, 1782
MunI CAATTG 2 cut(s) 453, 1587
Mva1269I GAATGC 2 cut(s) 850, 1415
MvaI CCWGG 2 cut(s) 862, 1782
MwoI GCNNNNNNNGC 3 cut(s) 857, 1692, 1842
NciI CCSGG 1 cut(s) 183
NdeII GATC 9 cut(s) 487, 549, 1066, 1089, 1445, 1705, 1722, 2005, 2481
NlaIII CATG 9 cut(s) 644, 806, 931, 1043, 1220, 1518, 1529, 1880, 2054
NlaIV GGNNCC 6 cut(s) 253, 372, 708, 1998, 2163, 2393
NmuCI GTSAC 3 cut(s) 68, 893, 1591
NsiI ATGCAT 1 cut(s) 1076
NspI RCATGY 3 cut(s) 806, 1043, 1529
NspV TTCGAA 1 cut(s) 2358
OliI CACNNNNGTG 1 cut(s) 1528
PciI ACATGT 2 cut(s) 802, 1525
PciSI GCTCTTC 1 cut(s) 870
PctI GAATGC 2 cut(s) 850, 1415
PdmI GAANNNNTTC 2 cut(s) 730, 966
PfeI GAWTC 7 cut(s) 424, 578, 1198, 1504, 2059, 2074, 2087
PflMI CCANNNNNTGG 1 cut(s) 1397
PfoI TCCNGGA 1 cut(s) 1780
PkrI GCNGC 7 cut(s) 778, 850, 1282, 1479, 1623, 1717, 2396
PleI GAGTC 3 cut(s) 26, 2311, 2435
PpsI GAGTC 3 cut(s) 26, 2311, 2435
Ppu21I YACGTR 1 cut(s) 2264
PpuMI RGGWCCY 1 cut(s) 470
PscI ACATGT 2 cut(s) 802, 1525
PshAI GACNNNNGTC 1 cut(s) 2114
PsiI TTATAA 1 cut(s) 2184
Psp5II RGGWCCY 1 cut(s) 470
Psp6I CCWGG 2 cut(s) 860, 1780
PspFI CCCAGC 1 cut(s) 314
PspGI CCWGG 2 cut(s) 860, 1780
PspN4I GGNNCC 6 cut(s) 253, 372, 708, 1998, 2163, 2393
PspPI GGNCC 4 cut(s) 470, 1963, 2162, 2540
PspPPI RGGWCCY 1 cut(s) 470
PstI CTGCAG 1 cut(s) 778
PstNI CAGNNNCTG 2 cut(s) 473, 2444
PsuI RGATCY 3 cut(s) 1445, 1722, 2481
PvuII CAGCTG 3 cut(s) 560, 812, 2194
RsaI GTAC 9 cut(s) 226, 240, 253, 294, 481, 607, 1266, 1468, 2425
RsaNI GTAC 9 cut(s) 225, 239, 252, 293, 480, 606, 1265, 1467, 2424
RseI CAYNNNNRTG 2 cut(s) 975, 1528
SapI GCTCTTC 1 cut(s) 870
SatI GCNGC 7 cut(s) 777, 849, 1281, 1478, 1622, 1716, 2395
Sau3AI GATC 9 cut(s) 487, 549, 1066, 1089, 1445, 1705, 1722, 2005, 2481
Sau96I GGNCC 4 cut(s) 470, 1963, 2162, 2540
SchI GAGTC 3 cut(s) 26, 2312, 2435
ScrFI CCNGG 3 cut(s) 183, 862, 1782
SduI GDGCHC 1 cut(s) 1535
SfaNI GCATC 6 cut(s) 62, 439, 1292, 1918, 1919, 2423
SfcI CTRYAG 1 cut(s) 774
SfuI TTCGAA 1 cut(s) 2358
SinI GGWCC 2 cut(s) 470, 2540
SmiMI CAYNNNNRTG 2 cut(s) 975, 1528
SmlI CTYRAG 2 cut(s) 1134, 1727
SmoI CTYRAG 2 cut(s) 1134, 1727
SpeI ACTAGT 1 cut(s) 2369
SspMI CTAG 4 cut(s) 42, 780, 2106, 2370
StyD4I CCNGG 3 cut(s) 181, 860, 1780
StyI CCWWGG 3 cut(s) 1462, 1966, 2409
TaaI ACNGT 4 cut(s) 49, 610, 619, 1229
TaiI ACGT 2 cut(s) 2114, 2266
TaqI TCGA 4 cut(s) 796, 1231, 2280, 2358
TatI WGTACW 2 cut(s) 1264, 2423
TauI GCSGC 2 cut(s) 1624, 2397
TfiI GAWTC 7 cut(s) 424, 578, 1198, 1504, 2059, 2074, 2087
TscAI CASTG 2 cut(s) 262, 1132
TseFI GTSAC 3 cut(s) 68, 893, 1591
TseI GCWGC 5 cut(s) 776, 848, 1280, 1477, 1715
Tsp45I GTSAC 3 cut(s) 68, 893, 1591
TspGWI ACGGA 2 cut(s) 869, 1363
TspRI CASTG 2 cut(s) 262, 1132
Van91I CCANNNNNTGG 1 cut(s) 1397
VpaK11BI GGWCC 2 cut(s) 470, 2540
XapI RAATTY 5 cut(s) 407, 865, 1848, 2252, 2610
XceI RCATGY 3 cut(s) 806, 1043, 1529
XcmI CCANNNNNNNNNTGG 2 cut(s) 1853, 2223
XmiI GTMKAC 1 cut(s) 1212
XmnI GAANNNNTTC 2 cut(s) 730, 966
XspI CTAG 4 cut(s) 42, 780, 2106, 2370
Zsp2I ATGCAT 1 cut(s) 1076
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.