histone-lysine N-methyltransferase, H3 lysine-9 specific
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 2 cut(s) | 182, 195 |
| AcvI | CACGTG | 1 cut(s) | 359 |
| AfaI | GTAC | 2 cut(s) | 58, 369 |
| AflIII | ACRYGT | 1 cut(s) | 358 |
| AgsI | TTSAA | 2 cut(s) | 112, 328 |
| AluBI | AGCT | 1 cut(s) | 127 |
| AluI | AGCT | 1 cut(s) | 127 |
| Alw26I | GTCTC | 1 cut(s) | 306 |
| AlwI | GGATC | 2 cut(s) | 182, 195 |
| ApeKI | GCWGC | 2 cut(s) | 88, 158 |
| AsuHPI | GGTGA | 4 cut(s) | 31, 56, 168, 388 |
| BamHI | GGATCC | 1 cut(s) | 187 |
| BbrPI | CACGTG | 1 cut(s) | 359 |
| BbsI | GAAGAC | 1 cut(s) | 229 |
| BbvI | GCAGC | 2 cut(s) | 75, 145 |
| BccI | CCATC | 3 cut(s) | 148, 199, 341 |
| BceAI | ACGGC | 1 cut(s) | 251 |
| BcoDI | GTCTC | 1 cut(s) | 306 |
| BfaI | CTAG | 1 cut(s) | 309 |
| BfmI | CTRYAG | 1 cut(s) | 227 |
| BisI | GCNGC | 2 cut(s) | 89, 159 |
| BlsI | GCNGC | 2 cut(s) | 90, 160 |
| BmiI | GGNNCC | 2 cut(s) | 138, 189 |
| BmsI | GCATC | 1 cut(s) | 362 |
| BpiI | GAAGAC | 1 cut(s) | 229 |
| BpmI | CTGGAG | 2 cut(s) | 123, 238 |
| BsaAI | YACGTR | 1 cut(s) | 359 |
| Bse1I | ACTGG | 1 cut(s) | 16 |
| Bse3DI | GCAATG | 1 cut(s) | 83 |
| BseGI | GGATG | 1 cut(s) | 352 |
| BseMI | GCAATG | 1 cut(s) | 83 |
| BseNI | ACTGG | 1 cut(s) | 16 |
| BseXI | GCAGC | 2 cut(s) | 75, 145 |
| BslFI | GGGAC | 1 cut(s) | 287 |
| BsmAI | GTCTC | 1 cut(s) | 306 |
| BsmBI | CGTCTC | 1 cut(s) | 306 |
| BsmFI | GGGAC | 1 cut(s) | 287 |
| Bsp1407I | TGTACA | 1 cut(s) | 367 |
| Bsp143I | GATC | 1 cut(s) | 187 |
| BspLI | GGNNCC | 2 cut(s) | 138, 189 |
| BspMAI | CTGCAG | 1 cut(s) | 231 |
| BspPI | GGATC | 2 cut(s) | 182, 195 |
| BsrDI | GCAATG | 1 cut(s) | 83 |
| BsrGI | TGTACA | 1 cut(s) | 367 |
| BsrI | ACTGG | 1 cut(s) | 16 |
| BssMI | GATC | 1 cut(s) | 187 |
| Bst4CI | ACNGT | 4 cut(s) | 44, 61, 367, 376 |
| Bst6I | CTCTTC | 1 cut(s) | 144 |
| BstAUI | TGTACA | 1 cut(s) | 367 |
| BstBAI | YACGTR | 1 cut(s) | 359 |
| BstF5I | GGATG | 1 cut(s) | 352 |
| BstKTI | GATC | 1 cut(s) | 190 |
| BstMAI | GTCTC | 1 cut(s) | 306 |
| BstMBI | GATC | 1 cut(s) | 187 |
| BstSFI | CTRYAG | 1 cut(s) | 227 |
| BstV1I | GCAGC | 2 cut(s) | 75, 145 |
| BstV2I | GAAGAC | 1 cut(s) | 229 |
| BstX2I | RGATCY | 1 cut(s) | 187 |
| BstYI | RGATCY | 1 cut(s) | 187 |
| BtsCI | GGATG | 1 cut(s) | 352 |
| BtsIMutI | CAGTG | 1 cut(s) | 363 |
| Csp6I | GTAC | 2 cut(s) | 57, 368 |
| CviAII | CATG | 2 cut(s) | 92, 120 |
| CviJI | RGCY | 5 cut(s) | 50, 127, 137, 158, 266 |
| CviKI_1 | RGCY | 5 cut(s) | 50, 127, 137, 158, 266 |
| CviQI | GTAC | 2 cut(s) | 57, 368 |
| DpnI | GATC | 1 cut(s) | 189 |
| DpnII | GATC | 1 cut(s) | 187 |
| DraI | TTTAAA | 1 cut(s) | 78 |
| Eam1104I | CTCTTC | 1 cut(s) | 144 |
| EarI | CTCTTC | 1 cut(s) | 144 |
| Eco72I | CACGTG | 1 cut(s) | 359 |
| EcoT22I | ATGCAT | 1 cut(s) | 85 |
| Esp3I | CGTCTC | 1 cut(s) | 306 |
| FaeI | CATG | 2 cut(s) | 95, 123 |
| FaiI | YATR | 3 cut(s) | 93, 121, 384 |
| FaqI | GGGAC | 1 cut(s) | 287 |
| FatI | CATG | 2 cut(s) | 91, 119 |
| Fnu4HI | GCNGC | 2 cut(s) | 89, 159 |
| FokI | GGATG | 1 cut(s) | 359 |
| Fsp4HI | GCNGC | 2 cut(s) | 89, 159 |
| FspBI | CTAG | 1 cut(s) | 309 |
| GluI | GCNGC | 2 cut(s) | 89, 159 |
| GsuI | CTGGAG | 2 cut(s) | 123, 238 |
| Hin1II | CATG | 2 cut(s) | 95, 123 |
| HinfI | GANTC | 2 cut(s) | 104, 173 |
| HphI | GGTGA | 4 cut(s) | 31, 56, 168, 388 |
| Hpy188I | TCNGA | 1 cut(s) | 103 |
| Hpy188III | TCNNGA | 2 cut(s) | 217, 272 |
| HpyAV | CCTTC | 1 cut(s) | 291 |
| HpyCH4III | ACNGT | 4 cut(s) | 44, 61, 367, 376 |
| HpyCH4IV | ACGT | 1 cut(s) | 358 |
| HpyCH4V | TGCA | 5 cut(s) | 32, 83, 91, 229, 353 |
| HpySE526I | ACGT | 1 cut(s) | 358 |
| Hsp92II | CATG | 2 cut(s) | 95, 123 |
| Kzo9I | GATC | 1 cut(s) | 187 |
| LmnI | GCTCC | 1 cut(s) | 142 |
| LpnPI | CCDG | 6 cut(s) | 153, 183, 202, 316, 329, 349 |
| Lsp1109I | GCAGC | 2 cut(s) | 75, 145 |
| LweI | GCATC | 1 cut(s) | 362 |
| MaeI | CTAG | 1 cut(s) | 309 |
| MaeII | ACGT | 1 cut(s) | 358 |
| MaeIII | GTNAC | 2 cut(s) | 331, 361 |
| MalI | GATC | 1 cut(s) | 189 |
| MboI | GATC | 1 cut(s) | 187 |
| MboII | GAAGA | 5 cut(s) | 124, 161, 234, 264, 307 |
| MflI | RGATCY | 1 cut(s) | 187 |
| MnlI | CCTC | 2 cut(s) | 40, 258 |
| Mph1103I | ATGCAT | 1 cut(s) | 85 |
| MseI | TTAA | 4 cut(s) | 39, 77, 233, 391 |
| NdeII | GATC | 1 cut(s) | 187 |
| NlaIII | CATG | 2 cut(s) | 95, 123 |
| NlaIV | GGNNCC | 2 cut(s) | 138, 189 |
| NmuCI | GTSAC | 2 cut(s) | 331, 361 |
| NsiI | ATGCAT | 1 cut(s) | 85 |
| PfeI | GAWTC | 2 cut(s) | 104, 173 |
| PkrI | GCNGC | 2 cut(s) | 90, 160 |
| PmaCI | CACGTG | 1 cut(s) | 359 |
| PmlI | CACGTG | 1 cut(s) | 359 |
| Ppu21I | YACGTR | 1 cut(s) | 359 |
| PspCI | CACGTG | 1 cut(s) | 359 |
| PspN4I | GGNNCC | 2 cut(s) | 138, 189 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 252, 284 |
| PstI | CTGCAG | 1 cut(s) | 231 |
| PsuI | RGATCY | 1 cut(s) | 187 |
| RsaI | GTAC | 2 cut(s) | 58, 369 |
| RsaNI | GTAC | 2 cut(s) | 57, 368 |
| SaqAI | TTAA | 4 cut(s) | 39, 77, 233, 391 |
| SatI | GCNGC | 2 cut(s) | 89, 159 |
| Sau3AI | GATC | 1 cut(s) | 187 |
| SetI | ASST | 2 cut(s) | 129, 361 |
| SfaNI | GCATC | 1 cut(s) | 362 |
| SfcI | CTRYAG | 1 cut(s) | 227 |
| SmiI | ATTTAAAT | 1 cut(s) | 78 |
| SspMI | CTAG | 1 cut(s) | 309 |
| SwaI | ATTTAAAT | 1 cut(s) | 78 |
| TaaI | ACNGT | 4 cut(s) | 44, 61, 367, 376 |
| TaiI | ACGT | 1 cut(s) | 361 |
| TaqI | TCGA | 1 cut(s) | 250 |
| TatI | WGTACW | 1 cut(s) | 367 |
| TfiI | GAWTC | 2 cut(s) | 104, 173 |
| Tru1I | TTAA | 4 cut(s) | 39, 77, 233, 391 |
| Tru9I | TTAA | 4 cut(s) | 39, 77, 233, 391 |
| TscAI | CASTG | 1 cut(s) | 370 |
| TseFI | GTSAC | 2 cut(s) | 331, 361 |
| TseI | GCWGC | 2 cut(s) | 88, 158 |
| Tsp45I | GTSAC | 2 cut(s) | 331, 361 |
| TspDTI | ATGAA | 3 cut(s) | 39, 108, 162 |
| TspRI | CASTG | 1 cut(s) | 370 |
| XspI | CTAG | 1 cut(s) | 309 |
| Zsp2I | ATGCAT | 1 cut(s) | 85 |