Rorug07G0095900

SAD/SRA domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0000355
Physical Location & Seq
Forward (+)
7529627 .. 7532137
2511 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0095900.1

Sequence Viewer

Length: 1779 bp
ATGTTTCGTCGTCTACTCAAACCCAACACTACTCGCCTCCTCCGTCTTCTCTCTCTAAACCCTAACACCTCCTCTCTCCTCCTCTCTTCTTCTTCCTCTTCCTCTTCCTCTTCCGCCATGAAAGACCCAGAAACCAACAACCCCATAGCCCTCTCCACCCACCTCCTCACTTCTCTCTCCTCGGAAATCCCGCTCGTCCAAACCTTCAAGGGCAAATGGGCCTTAATCCAGGCCAAGCTCACCGTCCTCCAGGCCCAGCTCACCGACTTCGCCGGCTTCCCCACCTCCACCTCCAACCCTCTCGCCCTCGACCTGCTCCTCTCCGTCTCCCACACCCTCCGCGACGCCGTTTCGCTCGCCCAGCGCTGCCAGAGCCCCAATTTTTCCGACGGCAAGCTCCGGACTCAGAGCGACGTGGATTCCATTCTCGCCAAGGTCGATCTCCACCTCCGCGACGGCGAGATTCTCTTCCAGAGCGGCGTCCTCGACGACACCGCCGGCTTCAGCTCCTCCTCCTCCAAGAGGGAGACCGTCCGGGCAGAGTGCCGGAATCTCGTGACTGGGCTGCAGATTGGGAGCGCCGAGTCGCGGAACTCGGCCATGGAAGCGTTGCTCCAGTTTCTGCAGGAGGACGATAAGAACGTGATGATTGCGGTGGCGCAGGGGATCGTTCCGGTGCTGGTGAAGCTTCTCGATTCGAGCAGTTTCGAGATGAAGGAGAACGCCGTGGCGGCGATTTCGATGGTGTCGACGGTGGAGAGCAGCAAGAACGTTCTGGCGGCGGAGGGGCTGCCGCTGCTAAATCACTTGGTTAAGGTTCTGGACTCCGGGAGTGGATTCGCTAAGGAGAAGGCCTGTGTGGCGCTTCAAGGTTTAAGCTTTCCGAAGGAGAATGCGAGAGCGATTGGCTCCAGAGGCGGCATTTCGTCGCTGCTGGATATATGCCAGGGCGGCACGCCGGGCTCGCAGGCTTTGGCGGCCGGAGTGTTGAGGAATTTGGCTGCTTTTGATGAGAACAAGGAGAATATTATACAGGAGGAAGGGGATGTAGTTCTGTTGGCGCTGGCGAAATCAGGGACGGCATTAGCGCAGGAGAATGCGATCGGGTGTTTGTGTCATTTGGTCTCTGATAGCGAGAGCCAGAAGATTTCGGTCTACAAGCAGGGTGGGATTGAGTGCTTGAAGAATTTCTGGGATTCGGGGTGTAATAATAATCGGAGTCTGGAGGTTGCGGTGGAGTTGCTGATGCACTTGGCTTCGTGCTCTCTGATTGCGGAAATTCTTGTTGCCGAGGGGTTTGTCGCTAGGATTGTTGAGGTATTGAATTGTGGTGTGTTGGGGGCGAGGATTCAGGCGGCTAAGGCGGTTTACGAGCTGGGGTTTTGCTCGAGAACTAGGAAGGAGATGGGTGAATGTGGCTGCATTCCGCCTTTGGTTAAAATGTTGGATGGCAAAGCATTGGAAGAGAAAGAGGTCGCCGCCAAGGCCTTGTCGACATTGTTGCTCTTTGCTGACAATAGGAAGATTTTTAGGAAAATTGAAGGGGGGATTGTGAGTACAGTTCAGCTTTTGAACCCTTCTATTCAGAATTTGGATAAGAAGTACCCTGTTGCTTTGTTGGCATCACTTGTGCGTTCGAAGAAGTGCAAGAAGCAAATGGTGGCTGCCGGTGTGTGTGTACATTTGCAGAAACTGCTCGGTTTGGAAGTAGAGGGGTCTCAGAAGCTCTTGGAAAGCCTTTGTCGTAGTAAAATTTGGGGTGTTTTTGCCAGATCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00310 ko04211 map00310 map04211
Pfam Domains
Protein Families
SAD_SRA

Protein Analysis

592

Amino Acids

63.37

Weight (kDa)

8.24

Isoelectric Point (pI)

43.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF7032 PF23005 53 - 161 2.6e-34 Domain of unknown function (DUF7032)
Arm PF00514 211 - 247 4.3e-07 Armadillo/beta-catenin-like repeat
ARM_ARMC5 PF24768 252 - 441 1.4e-07 ARMC5
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000355)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G22740 AT2G22740 AT2G35160 AT2G35160 AT2G35160 AT2G35160 AT2G35160
fragaria_vesca FvH4_5g20100 FvH4_5g20130 FvH4_5g20130 FvH4_5g20130 FvH4_5g20130 FvH4_5g20130 FvH4_5g20150 FvH4_5g25380 FvH4_5g30731 FvH4_5g30740
malus_domestica MD03G1258900.v1.1 MD04G1052400.v1.1 MD11G1279700.v1.1
prunus_persica Prupe.2G064400_v2.0.a1 Prupe.5G057000_v2.0.a1 Prupe.5G057400_v2.0.a1
pyrus_communis pycom03g20690 pycom04g04620 pycom11g24730
rosa_chinensis RchiOBHm_Chr7g0204991 RchiOBHm_Chr7g0205081 RchiOBHm_Chr7g0205121 RchiOBHm_Chr7g0205131 RchiOBHm_Chr7g0215601 RchiOBHm_Chr7g0225631
rosa_laevigata RLG00000001799 RLG00000002623 RLG00000002644 RLG00000003398 RLG00000003403 RLG00000003417 RLG00000034641
rosa_multiflora Rmu_co8235369.1_g000001 Rmu_co8353775.1_g000001 Rmu_co8458607.1_g000001 Rmu_sc0000898.1_g000043 Rmu_sc0000898.1_g000048 Rmu_sc0001072.1_g000001 Rmu_sc0001072.1_g000002 Rmu_sc0003876.1_g000010 Rmu_sc0005112.1_g000021 Rmu_sc0007602.1_g000010 Rmu_sc0009349.1_g000014 Rmu_sc0020855.1_g000001 Rmu_sc0023402.1_g000001 Rmu_sc0024226.1_g000004
rosa_roxburghii Rroxscaffold_3G00233620 Rroxscaffold_3G00244060 Rroxscaffold_3G00252560 Rroxscaffold_3G00252590 Rroxscaffold_3G00252620
rosa_rugosa Rorug07G0086900 Rorug07G0087000 Rorug07G0087000 Rorug07G0087400 Rorug07G0087500 Rorug07G0087600 Rorug07G0087700 Rorug07G0087800 Rorug07G0088100 Rorug07G0095600.1 Rorug07G0095700.1 Rorug07G0095800.1 Rorug07G0095900 Rorug07G0096000 Rorug07G0096100 Rorug07G0155000 Rorug07G0232100
rosa_samantha Rh7AG217900 Rh7AG218400 Rh7AG219000 Rh7AG291200 Rh7AG371700 Rh7BG214800 Rh7BG215000 Rh7BG215500 Rh7BG223800 Rh7BG224400 Rh7BG283300 Rh7BG283800 Rh7BG366000 Rh7CG231100 Rh7CG231600 Rh7CG232000 Rh7CG241100 Rh7CG311200 Rh7CG390400 Rh7DG225200 Rh7DG225900 Rh7DG226400 Rh7DG295000 Rh7DG376800
rosa_wichuraiana Rw0G004730 Rw7G018880 Rw7G018900 Rw7G018920 Rw7G018940 Rw7G018960 Rw7G024860 Rw7G031790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 321
AccBSI CCGCTC 2 cut(s) 193, 477
AccI GTMKAC 4 cut(s) 13, 749, 1155, 1493
AccII CGCG 3 cut(s) 342, 453, 589
AccIII TCCGGA 1 cut(s) 399
AclI AACGTT 1 cut(s) 771
AclWI GGATC 1 cut(s) 674
AcoI YGGCCR 2 cut(s) 597, 978
AcsI RAATTY 5 cut(s) 994, 1186, 1278, 1588, 1752
AcuI CTGAAG 1 cut(s) 487
AcyI GRCGYC 2 cut(s) 345, 480
AfaI GTAC 3 cut(s) 1558, 1604, 1680
AfeI AGCGCT 1 cut(s) 365
AfiI CCNNNNNNNGG 2 cut(s) 522, 588
AgsI TTSAA 6 cut(s) 208, 869, 1183, 1324, 1541, 1573
AjiI CACGTC 1 cut(s) 415
AjnI CCWGG 3 cut(s) 228, 249, 945
AluBI AGCT 9 cut(s) 238, 259, 397, 507, 688, 879, 1375, 1567, 1726
AluI AGCT 9 cut(s) 238, 259, 397, 507, 688, 879, 1375, 1567, 1726
Alw21I GWGCWC 1 cut(s) 1265
Alw26I GTCTC 4 cut(s) 331, 521, 1129, 1722
AlwI GGATC 1 cut(s) 674
AlwNI CAGNNNCTG 2 cut(s) 622, 1693
Ama87I CYCGRG 1 cut(s) 1387
Aor13HI TCCGGA 1 cut(s) 399
Aor51HI AGCGCT 1 cut(s) 365
AoxI GGCC 7 cut(s) 219, 231, 252, 597, 852, 978, 1485
ApeKI GCWGC 9 cut(s) 366, 565, 762, 790, 796, 931, 1001, 1419, 1664
ApoI RAATTY 5 cut(s) 994, 1186, 1278, 1588, 1752
Asp700I GAANNNNTTC 1 cut(s) 1187
AspLEI GCGC 6 cut(s) 366, 581, 661, 865, 1063, 1090
AspS9I GGNCC 2 cut(s) 219, 253
AsuC2I CCSGG 3 cut(s) 536, 829, 960
AsuHPI GGTGA 4 cut(s) 232, 253, 694, 1421
AsuII TTCGAA 1 cut(s) 1637
AvaI CYCGRG 1 cut(s) 1387
BanII GRGCYC 2 cut(s) 377, 965
BauI CACGAG 1 cut(s) 554
BbsI GAAGAC 1 cut(s) 38
Bbv12I GWGCWC 1 cut(s) 1265
BbvI GCAGC 9 cut(s) 353, 552, 774, 777, 783, 918, 988, 1406, 1651
BccI CCATC 3 cut(s) 736, 1399, 1442
BceAI ACGGC 5 cut(s) 332, 406, 472, 710, 1095
BcgI CGANNNNNNTGC 2 cut(s) 1483, 1517
BciT130I CCWGG 3 cut(s) 230, 251, 947
BcnI CCSGG 3 cut(s) 536, 829, 960
BcoDI GTCTC 4 cut(s) 331, 521, 1129, 1722
BfaI CTAG 2 cut(s) 1305, 1395
BfmI CTRYAG 2 cut(s) 566, 623
BfoI RGCGCY 4 cut(s) 367, 582, 866, 1064
BfuAI ACCTGC 1 cut(s) 321
BglI GCCNNNNNGGC 4 cut(s) 731, 860, 951, 1484
BglII AGATCT 1 cut(s) 1772
Bme1390I CCNGG 6 cut(s) 230, 251, 536, 829, 947, 960
BmeT110I CYCGRG 1 cut(s) 1387
BmgBI CACGTC 1 cut(s) 415
BmgT120I GGNCC 2 cut(s) 219, 253
BmiI GGNNCC 1 cut(s) 910
BmrFI CCNGG 6 cut(s) 230, 251, 536, 829, 947, 960
BmrI ACTGGG 1 cut(s) 570
BmsI GCATC 2 cut(s) 1236, 1631
BmuI ACTGGG 1 cut(s) 570
BpiI GAAGAC 1 cut(s) 38
BpmI CTGGAG 4 cut(s) 233, 599, 895, 1244
Bpu10I CCTNAGC 2 cut(s) 843, 1359
Bpu14I TTCGAA 1 cut(s) 1637
BpuMI CCSGG 3 cut(s) 536, 829, 960
BsaHI GRCGYC 2 cut(s) 345, 480
BsaI GGTCTC 3 cut(s) 521, 1129, 1722
BsaJI CCNNGG 7 cut(s) 180, 432, 600, 726, 946, 1290, 1482
BsaWI WCCGGW 2 cut(s) 399, 673
Bsc4I CCNNNNNNNGG 2 cut(s) 522, 588
Bse118I RCCGGY 3 cut(s) 272, 497, 1667
Bse1I ACTGG 2 cut(s) 565, 616
BseAI TCCGGA 1 cut(s) 399
BseBI CCWGG 3 cut(s) 230, 251, 947
BseDI CCNNGG 7 cut(s) 180, 432, 600, 726, 946, 1290, 1482
BseGI GGATG 2 cut(s) 1051, 1453
BseLI CCNNNNNNNGG 2 cut(s) 522, 588
BseMII CTCAG 2 cut(s) 419, 1733
BseNI ACTGG 2 cut(s) 565, 616
BseX3I CGGCCG 1 cut(s) 978
BseXI GCAGC 9 cut(s) 353, 552, 774, 777, 783, 918, 988, 1406, 1651
BseYI CCCAGC 3 cut(s) 255, 360, 1375
Bsh1236I CGCG 3 cut(s) 342, 453, 589
Bsh1285I CGRYCG 2 cut(s) 981, 1104
BshFI GGCC 7 cut(s) 221, 233, 254, 599, 854, 980, 1487
BsiEI CGRYCG 2 cut(s) 981, 1104
BsiHKAI GWGCWC 1 cut(s) 1265
BsiHKCI CYCGRG 1 cut(s) 1387
BslFI GGGAC 1 cut(s) 1090
BslI CCNNNNNNNGG 2 cut(s) 522, 588
BsmAI GTCTC 4 cut(s) 331, 521, 1129, 1722
BsmBI CGTCTC 1 cut(s) 331
BsmFI GGGAC 1 cut(s) 1090
BsmI GAATGC 3 cut(s) 898, 1102, 1422
BsnI GGCC 7 cut(s) 221, 233, 254, 599, 854, 980, 1487
Bso31I GGTCTC 3 cut(s) 521, 1129, 1722
BsoBI CYCGRG 1 cut(s) 1387
Bsp119I TTCGAA 1 cut(s) 1637
Bsp1286I GDGCHC 3 cut(s) 377, 965, 1265
Bsp13I TCCGGA 1 cut(s) 399
Bsp1407I TGTACA 1 cut(s) 1678
Bsp143I GATC 4 cut(s) 439, 666, 1101, 1772
Bsp19I CCATGG 1 cut(s) 600
BspANI GGCC 7 cut(s) 221, 233, 254, 599, 854, 980, 1487
BspCNI CTCAG 2 cut(s) 418, 1732
BspEI TCCGGA 1 cut(s) 399
BspFNI CGCG 3 cut(s) 342, 453, 589
BspLI GGNNCC 1 cut(s) 910
BspMAI CTGCAG 2 cut(s) 570, 627
BspMI ACCTGC 1 cut(s) 321
BspPI GGATC 1 cut(s) 674
BspT104I TTCGAA 1 cut(s) 1637
BspTNI GGTCTC 3 cut(s) 521, 1129, 1722
BsrBI CCGCTC 2 cut(s) 193, 477
BsrFI RCCGGY 3 cut(s) 272, 497, 1667
BsrGI TGTACA 1 cut(s) 1678
BsrI ACTGG 2 cut(s) 565, 616
BssAI RCCGGY 3 cut(s) 272, 497, 1667
BssECI CCNNGG 7 cut(s) 180, 432, 600, 726, 946, 1290, 1482
BssMI GATC 4 cut(s) 439, 666, 1101, 1772
BssNI GRCGYC 2 cut(s) 345, 480
BssSI CACGAG 1 cut(s) 554
BssT1I CCWWGG 3 cut(s) 432, 600, 1482
Bst2BI CACGAG 1 cut(s) 554
Bst2UI CCWGG 3 cut(s) 230, 251, 947
Bst4CI ACNGT 4 cut(s) 244, 532, 754, 1561
Bst6I CTCTTC 6 cut(s) 91, 103, 109, 115, 473, 1458
BstACI GRCGYC 2 cut(s) 345, 480
BstAPI GCANNNNNTGC 1 cut(s) 1693
BstAUI TGTACA 1 cut(s) 1678
BstBI TTCGAA 1 cut(s) 1637
BstC8I GCNNGC 8 cut(s) 274, 357, 395, 499, 956, 965, 969, 1065
BstDEI CTNAG 4 cut(s) 405, 843, 1359, 1719
BstDSI CCRYGG 2 cut(s) 600, 726
BstENI CCTNNNNNAGG 1 cut(s) 520
BstF5I GGATG 2 cut(s) 1051, 1453
BstFNI CGCG 3 cut(s) 342, 453, 589
BstH2I RGCGCY 4 cut(s) 367, 582, 866, 1064
BstHHI GCGC 6 cut(s) 366, 581, 661, 865, 1063, 1090
BstKTI GATC 4 cut(s) 442, 669, 1104, 1775
BstMAI GTCTC 4 cut(s) 331, 521, 1129, 1722
BstMBI GATC 4 cut(s) 439, 666, 1101, 1772
BstMCI CGRYCG 2 cut(s) 981, 1104
BstNI CCWGG 3 cut(s) 230, 251, 947
BstSCI CCNGG 6 cut(s) 228, 249, 534, 827, 945, 958
BstSFI CTRYAG 2 cut(s) 566, 623
BstUI CGCG 3 cut(s) 342, 453, 589
BstV1I GCAGC 9 cut(s) 353, 552, 774, 777, 783, 918, 988, 1406, 1651
BstV2I GAAGAC 1 cut(s) 38
BstX2I RGATCY 1 cut(s) 1772
BstYI RGATCY 1 cut(s) 1772
BstZI CGGCCG 1 cut(s) 978
BsuRI GGCC 7 cut(s) 221, 233, 254, 599, 854, 980, 1487
BtgI CCRYGG 2 cut(s) 600, 726
BtrI CACGTC 1 cut(s) 415
BtsCI GGATG 2 cut(s) 1051, 1453
BveI ACCTGC 1 cut(s) 321
Cac8I GCNNGC 8 cut(s) 274, 357, 395, 499, 956, 965, 969, 1065
CaiI CAGNNNCTG 2 cut(s) 622, 1693
CfoI GCGC 6 cut(s) 366, 581, 661, 865, 1063, 1090
Cfr10I RCCGGY 3 cut(s) 272, 497, 1667
Cfr13I GGNCC 2 cut(s) 219, 253
CseI GACGC 2 cut(s) 353, 469
Csp6I GTAC 3 cut(s) 1557, 1603, 1679
CspCI CAANNNNNGTGG 2 cut(s) 1147, 1182
CviAII CATG 2 cut(s) 118, 601
CviQI GTAC 3 cut(s) 1557, 1603, 1679
DdeI CTNAG 4 cut(s) 405, 843, 1359, 1719
DpnI GATC 4 cut(s) 441, 668, 1103, 1774
DpnII GATC 4 cut(s) 439, 666, 1101, 1772
EaeI YGGCCR 2 cut(s) 597, 978
EagI CGGCCG 1 cut(s) 978
Eam1104I CTCTTC 6 cut(s) 91, 103, 109, 115, 473, 1458
EarI CTCTTC 6 cut(s) 91, 103, 109, 115, 473, 1458
EciI GGCGGA 3 cut(s) 103, 797, 1416
EclXI CGGCCG 1 cut(s) 978
Eco130I CCWWGG 3 cut(s) 432, 600, 1482
Eco147I AGGCCT 2 cut(s) 854, 1487
Eco24I GRGCYC 2 cut(s) 377, 965
Eco31I GGTCTC 3 cut(s) 521, 1129, 1722
Eco47III AGCGCT 1 cut(s) 365
Eco52I CGGCCG 1 cut(s) 978
Eco57I CTGAAG 1 cut(s) 487
Eco88I CYCGRG 1 cut(s) 1387
EcoNI CCTNNNNNAGG 1 cut(s) 520
EcoRII CCWGG 3 cut(s) 228, 249, 945
EcoT14I CCWWGG 3 cut(s) 432, 600, 1482
EcoT38I GRGCYC 2 cut(s) 377, 965
ErhI CCWWGG 3 cut(s) 432, 600, 1482
Esp3I CGTCTC 1 cut(s) 331
FaeI CATG 2 cut(s) 121, 604
FaiI YATR 6 cut(s) 119, 146, 602, 941, 943, 1031
FaqI GGGAC 1 cut(s) 1090
FatI CATG 2 cut(s) 117, 600
FauI CCCGC 1 cut(s) 198
FblI GTMKAC 4 cut(s) 13, 749, 1155, 1493
FokI GGATG 2 cut(s) 1058, 1460
FriOI GRGCYC 2 cut(s) 377, 965
FspBI CTAG 2 cut(s) 1305, 1395
GlaI GCGC 6 cut(s) 365, 580, 660, 864, 1062, 1089
GsaI CCCAGC 3 cut(s) 259, 364, 1379
GsuI CTGGAG 4 cut(s) 233, 599, 895, 1244
HaeII RGCGCY 4 cut(s) 367, 582, 866, 1064
HaeIII GGCC 7 cut(s) 221, 233, 254, 599, 854, 980, 1487
HgaI GACGC 2 cut(s) 353, 469
HhaI GCGC 6 cut(s) 366, 581, 661, 865, 1063, 1090
Hin1I GRCGYC 2 cut(s) 345, 480
Hin1II CATG 2 cut(s) 121, 604
Hin6I GCGC 6 cut(s) 364, 579, 659, 863, 1061, 1088
HinP1I GCGC 6 cut(s) 364, 579, 659, 863, 1061, 1088
HincII GTYRAC 2 cut(s) 750, 1494
HindII GTYRAC 2 cut(s) 750, 1494
HindIII AAGCTT 2 cut(s) 686, 877
HphI GGTGA 4 cut(s) 232, 253, 694, 1421
Hpy166II GTNNAC 6 cut(s) 14, 750, 1156, 1369, 1494, 1679
Hpy188I TCNGA 9 cut(s) 184, 388, 408, 885, 1129, 1218, 1269, 1587, 1722
Hpy188III TCNNGA 9 cut(s) 400, 472, 556, 692, 709, 821, 912, 1223, 1389
Hpy8I GTNNAC 6 cut(s) 14, 750, 1156, 1369, 1494, 1679
Hpy99I CGWCG 8 cut(s) 12, 347, 392, 416, 458, 491, 754, 931
HpyAV CCTTC 8 cut(s) 214, 709, 844, 880, 1034, 1393, 1535, 1587
HpyCH4III ACNGT 4 cut(s) 244, 532, 754, 1561
HpyCH4IV ACGT 3 cut(s) 414, 642, 771
HpyCH4V TGCA 6 cut(s) 568, 625, 1249, 1422, 1647, 1687
HpyF3I CTNAG 4 cut(s) 405, 843, 1359, 1719
HpySE526I ACGT 3 cut(s) 414, 642, 771
Hsp92I GRCGYC 2 cut(s) 345, 480
Hsp92II CATG 2 cut(s) 121, 604
HspAI GCGC 6 cut(s) 364, 579, 659, 863, 1061, 1088
Kpn2I TCCGGA 1 cut(s) 399
KroI GCCGGC 2 cut(s) 272, 497
KroNI GCCGGC 2 cut(s) 274, 499
Kzo9I GATC 4 cut(s) 439, 666, 1101, 1772
LmnI GCTCC 6 cut(s) 321, 402, 512, 576, 618, 914
Lsp1109I GCAGC 9 cut(s) 353, 552, 774, 777, 783, 918, 988, 1406, 1651
LweI GCATC 2 cut(s) 1236, 1631
MaeI CTAG 2 cut(s) 1305, 1395
MaeII ACGT 3 cut(s) 414, 642, 771
MaeIII GTNAC 1 cut(s) 556
MalI GATC 4 cut(s) 441, 668, 1103, 1774
MbiI CCGCTC 2 cut(s) 193, 477
MboI GATC 4 cut(s) 439, 666, 1101, 1772
MflI RGATCY 1 cut(s) 1772
MhlI GDGCHC 3 cut(s) 377, 965, 1265
MluCI AATT 8 cut(s) 379, 994, 1186, 1278, 1324, 1536, 1588, 1752
MlyI GAGTC 4 cut(s) 397, 593, 818, 1228
MmeI TCCRAC 3 cut(s) 318, 411, 1425
MroI TCCGGA 1 cut(s) 399
MroNI GCCGGC 2 cut(s) 272, 497
MroXI GAANNNNTTC 1 cut(s) 1187
MseI TTAA 5 cut(s) 224, 813, 875, 1437, 1777
MspA1I CMGCKG 1 cut(s) 796
MspR9I CCNGG 6 cut(s) 230, 251, 536, 829, 947, 960
Mva1269I GAATGC 3 cut(s) 898, 1102, 1422
MvaI CCWGG 3 cut(s) 230, 251, 947
MvnI CGCG 3 cut(s) 342, 453, 589
NaeI GCCGGC 2 cut(s) 274, 499
NciI CCSGG 3 cut(s) 536, 829, 960
NcoI CCATGG 1 cut(s) 600
NdeII GATC 4 cut(s) 439, 666, 1101, 1772
NgoMIV GCCGGC 2 cut(s) 272, 497
NlaIII CATG 2 cut(s) 121, 604
NlaIV GGNNCC 1 cut(s) 910
NmeAIII GCCGAG 3 cut(s) 575, 607, 1315
NmuCI GTSAC 1 cut(s) 556
NspV TTCGAA 1 cut(s) 1637
PaeR7I CTCGAG 1 cut(s) 1387
PceI AGGCCT 2 cut(s) 854, 1487
PcsI WCGNNNNNNNCGW 4 cut(s) 40, 435, 639, 746
PctI GAATGC 3 cut(s) 898, 1102, 1422
PdiI GCCGGC 2 cut(s) 274, 499
PdmI GAANNNNTTC 1 cut(s) 1187
PfeI GAWTC 7 cut(s) 419, 463, 550, 695, 837, 1196, 1348
PfoI TCCNGGA 1 cut(s) 827
Ple19I CGATCG 1 cut(s) 1104
PleI GAGTC 4 cut(s) 397, 592, 818, 1227
PpsI GAGTC 4 cut(s) 397, 592, 818, 1227
Psp1406I AACGTT 1 cut(s) 771
Psp6I CCWGG 3 cut(s) 228, 249, 945
PspFI CCCAGC 3 cut(s) 255, 360, 1375
PspGI CCWGG 3 cut(s) 228, 249, 945
PspN4I GGNNCC 1 cut(s) 910
PspPI GGNCC 2 cut(s) 219, 253
PstI CTGCAG 2 cut(s) 570, 627
PstNI CAGNNNCTG 2 cut(s) 622, 1693
PsuI RGATCY 1 cut(s) 1772
PvuI CGATCG 1 cut(s) 1104
RsaI GTAC 3 cut(s) 1558, 1604, 1680
RsaNI GTAC 3 cut(s) 1557, 1603, 1679
SalI GTCGAC 2 cut(s) 748, 1492
SaqAI TTAA 5 cut(s) 224, 813, 875, 1437, 1777
Sau3AI GATC 4 cut(s) 439, 666, 1101, 1772
Sau96I GGNCC 2 cut(s) 219, 253
SchI GAGTC 4 cut(s) 397, 593, 818, 1228
ScrFI CCNGG 6 cut(s) 230, 251, 536, 829, 947, 960
SduI GDGCHC 3 cut(s) 377, 965, 1265
SfaNI GCATC 2 cut(s) 1236, 1631
SfcI CTRYAG 2 cut(s) 566, 623
Sfr274I CTCGAG 1 cut(s) 1387
SfuI TTCGAA 1 cut(s) 1637
SlaI CTCGAG 1 cut(s) 1387
SmlI CTYRAG 1 cut(s) 1387
SmoI CTYRAG 1 cut(s) 1387
Sse9I AATT 8 cut(s) 379, 994, 1186, 1278, 1324, 1536, 1588, 1752
SseBI AGGCCT 2 cut(s) 854, 1487
SspI AATATT 1 cut(s) 1027
SspMI CTAG 2 cut(s) 1305, 1395
StuI AGGCCT 2 cut(s) 854, 1487
StyD4I CCNGG 6 cut(s) 228, 249, 534, 827, 945, 958
StyI CCWWGG 3 cut(s) 432, 600, 1482
TaaI ACNGT 4 cut(s) 244, 532, 754, 1561
TaiI ACGT 3 cut(s) 417, 645, 774
TaqII GACCGA 1 cut(s) 1141
TasI AATT 8 cut(s) 379, 994, 1186, 1278, 1324, 1536, 1588, 1752
TatI WGTACW 2 cut(s) 1556, 1678
TauI GCSGC 9 cut(s) 480, 734, 782, 796, 921, 954, 980, 1358, 1481
TfiI GAWTC 7 cut(s) 419, 463, 550, 695, 837, 1196, 1348
Tru1I TTAA 5 cut(s) 224, 813, 875, 1437, 1777
Tru9I TTAA 5 cut(s) 224, 813, 875, 1437, 1777
TseFI GTSAC 1 cut(s) 556
TseI GCWGC 9 cut(s) 366, 565, 762, 790, 796, 931, 1001, 1419, 1664
Tsp45I GTSAC 1 cut(s) 556
TspDTI ATGAA 2 cut(s) 134, 728
TspGWI ACGGA 2 cut(s) 32, 313
XagI CCTNNNNNAGG 1 cut(s) 520
XapI RAATTY 5 cut(s) 994, 1186, 1278, 1588, 1752
XhoI CTCGAG 1 cut(s) 1387
XmiI GTMKAC 4 cut(s) 13, 749, 1155, 1493
XmnI GAANNNNTTC 1 cut(s) 1187
XspI CTAG 2 cut(s) 1305, 1395
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.