Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0000355

Physical Location & Seq

Genomic Coordinates Forward (+)

46665518 .. 46668448

Gene Structure 2931 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00252620.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1437 bp

ATGAGGGTTGTAATGGGGTTGCAGCAGTTGGAATCATCGAGAACAATTGAACAGCTAAGTGGTAGCCATTCTAAGGAAAGATTGGGAAAATTGTCCTTGGAAAATGGGCCTGAGTATAAGAGACCCAGAATCTCTGCTATTCGTGACTTCCCTCCTGAGTGTGGACAGTATGCAACTTCAGTTGGTACTTCTAATGACATTGGTATGGACATGACTGTGGCTAAAAAATATCCTCCTCAAAGAATAGTAGAATATGTTCGGGATTTCCCACCTCAATGTGGAATAAAGATATGTTTCGAGACCAAGGCTTTTGATGAAGTGAAAAAATCAGAAGTGGATGTTCAAGATGAAGAGCTTCACAACAGTGAATTGAAAGCAGATGTTTCTCAAGTCAATGGTGGCAACTTTCTACCTAGCAATATGATGGAACAGAGGATGGAACGTCCAAGGGAAAAGTCTTTGGATATATCTAATTCTCATAACTATCTGCTTGAAGAAGATGTTGAGAGTTCAGAACTGAAATTGAATAAAGAAATTCCGAACTTGAAGCCTGCATCACATCCTTCCTGGTGGAAGGGAAAAGTGGCTCACAAGTCTAAACCAGGAGGAGGTATGAGTGAAAGACAGAGAGAGAAACCTGATTCAAAGCTTCAGCTAGAAAGATCTAAAGATGCTTGGAGGACAAAAGTTGGCTCAGAGATTGGAGGACACTCTCTAAAGAATATTCATTCAATAGCAGGGAAGACTACTGGTTTTGGTCAGGCTAGTTCTAGCAGCAGCCTTCATGATAATAACACGGATGCCATCCGAAAAAAGGTGACAGAGACGTTGGGTCGTTTCAAAGCTCTTTGTAGACAACTGGAATATGACAAGTCAAAGGAAGGAGGAACTCCACTCAGAAGGGTCGATTTTAAAGCTGCAAAGATTCTCAAGAAGGAAGGAAAATATATAAATACTGGCAAACAAATCTTGGGACATGTCCCCGGTGTTGAAATTGGCGATGAATTTCATTACAGGATTGAACTTAATATTGTTGGCTTACATCACCCAACTCAAGGTGGTATAGATTATGCAACTTTTGGTGGGAAGATGCTTGCAACTAGTATTGTAGCATCTGGGGGATATGCTGATGATTTGCATAATTTGAATTCCTTGACTTACACGGGCCAAGGAGGAAATGTAATGCATCCGGATAAGGAACCTGAAGATCAAAAGCTTCAACGGGGAAACCTTGCTTTGAATAATAGCATGCATGCAAAGACTCCTGTTAGAATGATCCGTGGTTCTGAATCATCAGATGGAAGAACTAAATATTATATATATGACGGACTATATTTGGTAGTGAAGTGTTGGAAGGAAATGGGGCCTCATGGTAAGCTTGTTTTCAAGTTTCAACTAGACAGAATTGAGGGTCAGAGCTTTCTACGAAAGAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003676 GO:0003677 GO:0003824 GO:0005488 GO:0006325 GO:0006342 GO:0006355 GO:0006464 GO:0006479 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008168 GO:0008213 GO:0008276 GO:0008327 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010033 GO:0010200 GO:0010243 GO:0010428 GO:0010429 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016043 GO:0016458 GO:0016569 GO:0016570 GO:0016571 GO:0016740 GO:0016741 GO:0019219 GO:0019222 GO:0019538 GO:0031047 GO:0031048 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032259 GO:0036094 GO:0036211 GO:0040029 GO:0042054 GO:0042221 GO:0042493 GO:0043170 GO:0043412 GO:0043414 GO:0043565 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0045814 GO:0045892 GO:0045934 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051276 GO:0060255 GO:0065007 GO:0071704 GO:0071840 GO:0080090 GO:0097159 GO:0140096 GO:1901265 GO:1901363 GO:1901564 GO:1901698 GO:1901700 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko00310 ko04211 map00310 map04211

Pfam Domains

Protein Families

Pre-SET SAD_SRA SET

Protein Analysis

478

Amino Acids

53.59

Weight (kDa)

9.12

Isoelectric Point (pI)

43.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SAD_SRA	PF02182	324 - 472	4.1e-52	SAD/SRA domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000355)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G22740 AT2G22740 AT2G35160 AT2G35160 AT2G35160 AT2G35160 AT2G35160
fragaria_vesca	FvH4_5g20100 FvH4_5g20130 FvH4_5g20130 FvH4_5g20130 FvH4_5g20130 FvH4_5g20130 FvH4_5g20150 FvH4_5g25380 FvH4_5g30731 FvH4_5g30740
malus_domestica	MD03G1258900.v1.1 MD04G1052400.v1.1 MD11G1279700.v1.1
prunus_persica	Prupe.2G064400_v2.0.a1 Prupe.5G057000_v2.0.a1 Prupe.5G057400_v2.0.a1
pyrus_communis	pycom03g20690 pycom04g04620 pycom11g24730
rosa_chinensis	RchiOBHm_Chr7g0204991 RchiOBHm_Chr7g0205081 RchiOBHm_Chr7g0205121 RchiOBHm_Chr7g0205131 RchiOBHm_Chr7g0215601 RchiOBHm_Chr7g0225631
rosa_laevigata	RLG00000001799 RLG00000002623 RLG00000002644 RLG00000003398 RLG00000003403 RLG00000003417 RLG00000034641
rosa_multiflora	Rmu_co8235369.1_g000001 Rmu_co8353775.1_g000001 Rmu_co8458607.1_g000001 Rmu_sc0000898.1_g000043 Rmu_sc0000898.1_g000048 Rmu_sc0001072.1_g000001 Rmu_sc0001072.1_g000002 Rmu_sc0003876.1_g000010 Rmu_sc0005112.1_g000021 Rmu_sc0007602.1_g000010 Rmu_sc0009349.1_g000014 Rmu_sc0020855.1_g000001 Rmu_sc0023402.1_g000001 Rmu_sc0024226.1_g000004
rosa_roxburghii	Rroxscaffold_3G00233620 Rroxscaffold_3G00244060 Rroxscaffold_3G00252560 Rroxscaffold_3G00252590 Rroxscaffold_3G00252620
rosa_rugosa	Rorug07G0086900 Rorug07G0087000 Rorug07G0087000 Rorug07G0087400 Rorug07G0087500 Rorug07G0087600 Rorug07G0087700 Rorug07G0087800 Rorug07G0088100 Rorug07G0095600.1 Rorug07G0095700.1 Rorug07G0095800.1 Rorug07G0095900 Rorug07G0096000 Rorug07G0096100 Rorug07G0155000 Rorug07G0232100
rosa_samantha	Rh7AG217900 Rh7AG218400 Rh7AG219000 Rh7AG291200 Rh7AG371700 Rh7BG214800 Rh7BG215000 Rh7BG215500 Rh7BG223800 Rh7BG224400 Rh7BG283300 Rh7BG283800 Rh7BG366000 Rh7CG231100 Rh7CG231600 Rh7CG232000 Rh7CG241100 Rh7CG311200 Rh7CG390400 Rh7DG225200 Rh7DG225900 Rh7DG226400 Rh7DG295000 Rh7DG376800
rosa_wichuraiana	Rw0G004730 Rw7G018880 Rw7G018900 Rw7G018920 Rw7G018940 Rw7G018960 Rw7G024860 Rw7G031790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	853
AccIII	TCCGGA	1 cut(s)	1189
AclWI	GGATC	1 cut(s)	1270
AcsI	RAATTY	3 cut(s)	534, 1004, 1147
AcuI	CTGAAG	3 cut(s)	162, 635, 1224
AfaI	GTAC	1 cut(s)	187
AfiI	CCNNNNNNNGG	6 cut(s)	73, 161, 278, 608, 814, 1055
AflIII	ACRYGT	1 cut(s)	976
AhdI	GACNNNNNGTC	1 cut(s)	831
AhlI	ACTAGT	1 cut(s)	1100
AjnI	CCWGG	2 cut(s)	566, 601
AleI	CACNNNNGTG	1 cut(s)	363
AluBI	AGCT	9 cut(s)	55, 355, 649, 655, 845, 917, 1216, 1378, 1419
AluI	AGCT	9 cut(s)	55, 355, 649, 655, 845, 917, 1216, 1378, 1419
Alw26I	GTCTC	3 cut(s)	115, 293, 818
AlwI	GGATC	1 cut(s)	1270
Aor13HI	TCCGGA	1 cut(s)	1189
AoxI	GGCC	3 cut(s)	107, 1165, 1364
ApeKI	GCWGC	4 cut(s)	22, 774, 777, 917
ApoI	RAATTY	3 cut(s)	534, 1004, 1147
Asp700I	GAANNNNTTC	2 cut(s)	255, 354
AspS9I	GGNCC	3 cut(s)	107, 1165, 1364
AsuC2I	CCSGG	1 cut(s)	984
AsuHPI	GGTGA	2 cut(s)	829, 1037
BbsI	GAAGAC	1 cut(s)	749
BbvI	GCAGC	4 cut(s)	34, 786, 789, 904
BccI	CCATC	4 cut(s)	418, 430, 812, 1292
BciT130I	CCWGG	2 cut(s)	568, 603
BcnI	CCSGG	1 cut(s)	984
BcoDI	GTCTC	3 cut(s)	115, 293, 818
BcuI	ACTAGT	1 cut(s)	1100
BfaI	CTAG	6 cut(s)	414, 656, 765, 771, 1101, 1397
BglII	AGATCT	1 cut(s)	662
BisI	GCNGC	4 cut(s)	23, 775, 778, 918
BlsI	GCNGC	4 cut(s)	24, 776, 779, 919
Bme1390I	CCNGG	3 cut(s)	568, 603, 984
BmeRI	GACNNNNNGTC	1 cut(s)	831
BmgT120I	GGNCC	3 cut(s)	107, 1165, 1364
BmiI	GGNNCC	2 cut(s)	1200, 1365
BmrFI	CCNGG	3 cut(s)	568, 603, 984
BmsI	GCATC	6 cut(s)	563, 661, 790, 1080, 1121, 1195
BpiI	GAAGAC	1 cut(s)	749
BpuEI	CTTGAG	3 cut(s)	372, 914, 1038
BpuMI	CCSGG	1 cut(s)	984
BsaI	GGTCTC	2 cut(s)	115, 293
BsaJI	CCNNGG	6 cut(s)	96, 303, 446, 982, 1168, 1279
BsaWI	WCCGGW	1 cut(s)	1189
BsaXI	ACNNNNNCTCC	2 cut(s)	1164, 1194
Bsc4I	CCNNNNNNNGG	6 cut(s)	73, 161, 278, 608, 814, 1055
Bse1I	ACTGG	3 cut(s)	754, 864, 961
BseAI	TCCGGA	1 cut(s)	1189
BseBI	CCWGG	2 cut(s)	568, 603
BseDI	CCNNGG	6 cut(s)	96, 303, 446, 982, 1168, 1279
BseGI	GGATG	6 cut(s)	343, 441, 559, 804, 805, 1186
BseLI	CCNNNNNNNGG	6 cut(s)	73, 161, 278, 608, 814, 1055
BseMII	CTCAG	4 cut(s)	102, 147, 708, 910
BseNI	ACTGG	3 cut(s)	754, 864, 961
BseRI	GAGGAG	2 cut(s)	225, 621
BseXI	GCAGC	4 cut(s)	34, 786, 789, 904
BshFI	GGCC	3 cut(s)	109, 1167, 1366
BsiSI	CCGG	2 cut(s)	984, 1190
BslFI	GGGAC	2 cut(s)	965, 987
BslI	CCNNNNNNNGG	6 cut(s)	73, 161, 278, 608, 814, 1055
BsmAI	GTCTC	3 cut(s)	115, 293, 818
BsmBI	CGTCTC	1 cut(s)	818
BsmFI	GGGAC	2 cut(s)	965, 987
BsnI	GGCC	3 cut(s)	109, 1167, 1366
Bso31I	GGTCTC	2 cut(s)	115, 293
Bsp13I	TCCGGA	1 cut(s)	1189
Bsp143I	GATC	3 cut(s)	662, 1207, 1275
BspANI	GGCC	3 cut(s)	109, 1167, 1366
BspCNI	CTCAG	4 cut(s)	103, 148, 707, 909
BspEI	TCCGGA	1 cut(s)	1189
BspHI	TCATGA	1 cut(s)	784
BspLI	GGNNCC	2 cut(s)	1200, 1365
BspPI	GGATC	1 cut(s)	1270
BspQI	GCTCTTC	1 cut(s)	345
BspTNI	GGTCTC	2 cut(s)	115, 293
BsrI	ACTGG	3 cut(s)	754, 864, 961
BssECI	CCNNGG	6 cut(s)	96, 303, 446, 982, 1168, 1279
BssMI	GATC	3 cut(s)	662, 1207, 1275
BssT1I	CCWWGG	4 cut(s)	96, 303, 446, 1168
Bst2UI	CCWGG	2 cut(s)	568, 603
Bst4CI	ACNGT	3 cut(s)	168, 217, 365
Bst6I	CTCTTC	1 cut(s)	345
BstC8I	GCNNGC	4 cut(s)	552, 1095, 1250, 1254
BstDEI	CTNAG	6 cut(s)	56, 72, 111, 156, 694, 896
BstDSI	CCRYGG	1 cut(s)	1279
BstF5I	GGATG	6 cut(s)	343, 441, 559, 804, 805, 1186
BstKTI	GATC	3 cut(s)	665, 1210, 1278
BstMAI	GTCTC	3 cut(s)	115, 293, 818
BstMBI	GATC	3 cut(s)	662, 1207, 1275
BstNI	CCWGG	2 cut(s)	568, 603
BstNSI	RCATGY	3 cut(s)	980, 1252, 1256
BstSCI	CCNGG	3 cut(s)	566, 601, 982
BstV1I	GCAGC	4 cut(s)	34, 786, 789, 904
BstV2I	GAAGAC	1 cut(s)	749
BstX2I	RGATCY	1 cut(s)	662
BstYI	RGATCY	1 cut(s)	662
BsuRI	GGCC	3 cut(s)	109, 1167, 1366
BtgI	CCRYGG	1 cut(s)	1279
BtgZI	GCGATG	1 cut(s)	1014
BtsCI	GGATG	6 cut(s)	343, 441, 559, 804, 805, 1186
BtsIMutI	CAGTG	1 cut(s)	370
Cac8I	GCNNGC	4 cut(s)	552, 1095, 1250, 1254
CciI	TCATGA	1 cut(s)	784
Cfr13I	GGNCC	3 cut(s)	107, 1165, 1364
Csp6I	GTAC	1 cut(s)	186
CviAII	CATG	6 cut(s)	211, 785, 977, 1249, 1253, 1370
CviQI	GTAC	1 cut(s)	186
DdeI	CTNAG	6 cut(s)	56, 72, 111, 156, 694, 896
DpnI	GATC	3 cut(s)	664, 1209, 1277
DpnII	GATC	3 cut(s)	662, 1207, 1275
DraI	TTTAAA	1 cut(s)	913
DriI	GACNNNNNGTC	1 cut(s)	831
Eam1104I	CTCTTC	1 cut(s)	345
Eam1105I	GACNNNNNGTC	1 cut(s)	831
EarI	CTCTTC	1 cut(s)	345
Eco130I	CCWWGG	4 cut(s)	96, 303, 446, 1168
Eco31I	GGTCTC	2 cut(s)	115, 293
Eco57I	CTGAAG	3 cut(s)	162, 635, 1224
EcoO109I	RGGNCCY	1 cut(s)	1364
EcoRI	GAATTC	1 cut(s)	1147
EcoRII	CCWGG	2 cut(s)	566, 601
EcoT14I	CCWWGG	4 cut(s)	96, 303, 446, 1168
EcoT22I	ATGCAT	2 cut(s)	1188, 1254
ErhI	CCWWGG	4 cut(s)	96, 303, 446, 1168
Esp3I	CGTCTC	1 cut(s)	818
FaeI	CATG	6 cut(s)	214, 788, 980, 1252, 1256, 1373
FaqI	GGGAC	2 cut(s)	965, 987
FatI	CATG	6 cut(s)	210, 784, 976, 1248, 1252, 1369
FblI	GTMKAC	1 cut(s)	853
Fnu4HI	GCNGC	4 cut(s)	23, 775, 778, 918
FokI	GGATG	6 cut(s)	350, 448, 546, 791, 812, 1173
Fsp4HI	GCNGC	4 cut(s)	23, 775, 778, 918
FspBI	CTAG	6 cut(s)	414, 656, 765, 771, 1101, 1397
GluI	GCNGC	4 cut(s)	23, 775, 778, 918
HaeIII	GGCC	3 cut(s)	109, 1167, 1366
HapII	CCGG	2 cut(s)	984, 1190
Hin1II	CATG	6 cut(s)	214, 788, 980, 1252, 1256, 1373
HindIII	AAGCTT	3 cut(s)	647, 1214, 1376
HinfI	GANTC	6 cut(s)	32, 129, 641, 925, 1261, 1289
HpaII	CCGG	2 cut(s)	984, 1190
HphI	GGTGA	2 cut(s)	829, 1037
Hpy166II	GTNNAC	2 cut(s)	164, 854
Hpy188I	TCNGA	9 cut(s)	331, 514, 540, 697, 809, 899, 1288, 1297, 1416
Hpy188III	TCNNGA	9 cut(s)	39, 143, 155, 260, 298, 344, 785, 931, 1190
Hpy8I	GTNNAC	2 cut(s)	164, 854
HpyAV	CCTTC	8 cut(s)	568, 573, 791, 875, 894, 928, 932, 1348
HpyCH4III	ACNGT	3 cut(s)	168, 217, 365
HpyCH4IV	ACGT	2 cut(s)	442, 827
HpyF3I	CTNAG	6 cut(s)	56, 72, 111, 156, 694, 896
HpySE526I	ACGT	2 cut(s)	442, 827
Hsp92II	CATG	6 cut(s)	214, 788, 980, 1252, 1256, 1373
Kpn2I	TCCGGA	1 cut(s)	1189
Kzo9I	GATC	3 cut(s)	662, 1207, 1275
LguI	GCTCTTC	1 cut(s)	345
Lsp1109I	GCAGC	4 cut(s)	34, 786, 789, 904
LweI	GCATC	6 cut(s)	563, 661, 790, 1080, 1121, 1195
MaeI	CTAG	6 cut(s)	414, 656, 765, 771, 1101, 1397
MaeII	ACGT	2 cut(s)	442, 827
MaeIII	GTNAC	2 cut(s)	143, 817
MalI	GATC	3 cut(s)	664, 1209, 1277
MboI	GATC	3 cut(s)	662, 1207, 1275
MboII	GAAGA	7 cut(s)	362, 506, 509, 754, 1099, 1217, 1314
MfeI	CAATTG	1 cut(s)	45
MflI	RGATCY	1 cut(s)	662
MlyI	GAGTC	1 cut(s)	1255
MmeI	TCCRAC	2 cut(s)	9, 1331
Mph1103I	ATGCAT	2 cut(s)	1188, 1254
MroI	TCCGGA	1 cut(s)	1189
MroXI	GAANNNNTTC	2 cut(s)	255, 354
MseI	TTAA	2 cut(s)	912, 1026
MslI	CAYNNNNRTG	4 cut(s)	203, 215, 274, 363
MspI	CCGG	2 cut(s)	984, 1190
MspR9I	CCNGG	3 cut(s)	568, 603, 984
MunI	CAATTG	1 cut(s)	45
MvaI	CCWGG	2 cut(s)	568, 603
NciI	CCSGG	1 cut(s)	984
NdeII	GATC	3 cut(s)	662, 1207, 1275
NlaIII	CATG	6 cut(s)	214, 788, 980, 1252, 1256, 1373
NlaIV	GGNNCC	2 cut(s)	1200, 1365
NmuCI	GTSAC	2 cut(s)	143, 817
NsiI	ATGCAT	2 cut(s)	1188, 1254
NspI	RCATGY	3 cut(s)	980, 1252, 1256
OliI	CACNNNNGTG	1 cut(s)	363
PaeI	GCATGC	2 cut(s)	1252, 1256
PagI	TCATGA	1 cut(s)	784
PciI	ACATGT	1 cut(s)	976
PciSI	GCTCTTC	1 cut(s)	345
PdmI	GAANNNNTTC	2 cut(s)	255, 354
PfeI	GAWTC	5 cut(s)	32, 129, 641, 925, 1289
PkrI	GCNGC	4 cut(s)	24, 776, 779, 919
PleI	GAGTC	1 cut(s)	1255
PpsI	GAGTC	1 cut(s)	1255
PscI	ACATGT	1 cut(s)	976
Psp6I	CCWGG	2 cut(s)	566, 601
PspGI	CCWGG	2 cut(s)	566, 601
PspN4I	GGNNCC	2 cut(s)	1200, 1365
PspPI	GGNCC	3 cut(s)	107, 1165, 1364
PsrI	GAACNNNNNNTAC	2 cut(s)	240, 272
PsuI	RGATCY	1 cut(s)	662
RsaI	GTAC	1 cut(s)	187
RsaNI	GTAC	1 cut(s)	186
RseI	CAYNNNNRTG	4 cut(s)	203, 215, 274, 363
SapI	GCTCTTC	1 cut(s)	345
SaqAI	TTAA	2 cut(s)	912, 1026
SatI	GCNGC	4 cut(s)	23, 775, 778, 918
Sau3AI	GATC	3 cut(s)	662, 1207, 1275
Sau96I	GGNCC	3 cut(s)	107, 1165, 1364
SchI	GAGTC	1 cut(s)	1255
ScrFI	CCNGG	3 cut(s)	568, 603, 984
SfaNI	GCATC	6 cut(s)	563, 661, 790, 1080, 1121, 1195
SmiMI	CAYNNNNRTG	4 cut(s)	203, 215, 274, 363
SmlI	CTYRAG	3 cut(s)	387, 929, 1053
SmoI	CTYRAG	3 cut(s)	387, 929, 1053
SpeI	ACTAGT	1 cut(s)	1100
SphI	GCATGC	2 cut(s)	1252, 1256
SspI	AATATT	3 cut(s)	724, 1030, 1313
SspMI	CTAG	6 cut(s)	414, 656, 765, 771, 1101, 1397
StyD4I	CCNGG	3 cut(s)	566, 601, 982
StyI	CCWWGG	4 cut(s)	96, 303, 446, 1168
TaaI	ACNGT	3 cut(s)	168, 217, 365
TaiI	ACGT	2 cut(s)	445, 830
TaqI	TCGA	3 cut(s)	38, 297, 906
TfiI	GAWTC	5 cut(s)	32, 129, 641, 925, 1289
Tru1I	TTAA	2 cut(s)	912, 1026
Tru9I	TTAA	2 cut(s)	912, 1026
TscAI	CASTG	1 cut(s)	370
TseFI	GTSAC	2 cut(s)	143, 817
TseI	GCWGC	4 cut(s)	22, 774, 777, 917
Tsp45I	GTSAC	2 cut(s)	143, 817
TspDTI	ATGAA	6 cut(s)	330, 363, 716, 773, 998, 1017
TspGWI	ACGGA	3 cut(s)	812, 1268, 1341
TspRI	CASTG	1 cut(s)	370
XapI	RAATTY	3 cut(s)	534, 1004, 1147
XceI	RCATGY	3 cut(s)	980, 1252, 1256
XmiI	GTMKAC	1 cut(s)	853
XmnI	GAANNNNTTC	2 cut(s)	255, 354
XspI	CTAG	6 cut(s)	414, 656, 765, 771, 1101, 1397
Zsp2I	ATGCAT	2 cut(s)	1188, 1254

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.