RLG00000002644

histone-lysine N-methyltransferase, H3 lysine-9 specific

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
Physical Location & Seq
Reverse (-)
37462280 .. 37467398
5119 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000002644

Sequence Viewer

Length: 3132 bp
ATGGGGGTTGTAGAGGCGAACCCGCATTTGGACTCATCATCTAGGACAGTAGCATCGCTTAATGGCAGTCATTCTGAAGCAAGATTAGGCAAGAAGCCAATGGAAGTTGGTGAGTGTTCTTACCGCCCCAGTTCGGCTAAGATTAAGAGGCGAATAGTCTCTGCTGTTCGTGATTTTCCGCCGGGTTGTGGAAGAAATGTTCCCTTGAACAATGCCTTTGCTGGTACTTCTCAGAATGTACCAATAGAGGGTACCAGTGAATCGGAAGCTTTTGTTGGTGCTTCTCAGAGTGTACCGATAGAAAACTCGGTTGCTGGGGATAGAATTGATGATGGGAATGAGGTGGATGATAGTGACTTGATGAATATGGAGCCAGTTGAAAGAGGAACAGCCTTAGAAGATGAAGTATTTGATTTGCGGGAGAATCTGCATCAGTTGAGCAACAATTTGACAATTGTTGAAGGGGCAGATCCTGTTGGTACTAATGATCAGGCTGAGAAATTGATTAGCGGGGATAGAACTGATGATGGACAAAAAGTTGTAAACTTGATCCTCTCAGCTGGTCAGGTGGGTGGTGATTCTGACTTGATGAATAGGGGTGTTGGTACTGTGGAAACTGTTGAATTAACAGCCCTAGAGCATGAAGTATCTGATTTGTCAAAGAACCCTCATCTGGTGTGTGTGGCTACACGGGATGAAGAGATGGTTCCTGTGCTGTCAAATAGAAACTCTTCTTCCATTTCATTTTCTAATGTCAATGGTCAGAAAAAGACTGCAGCGAGAAGATATCCTCCTCGAAGACATGTCTCAGCTGTTCGGGACTTCCCTCCTTTTTGCGGAAGGAATGCTGCCGCGGAGGCCAGGAATTTTGGTGAAGAGCAGTCGGATATGGGTGACAAACCATCCTCATCAAATATGAATGCCATCATGCATCAAGCCAGAGAGGATGATGTTCAGGAGGAAGATTTTCTCAAGAATGAATTGGGAGTGAATGTTTCTGAAGTAACTGGAGGTGGAGTTCAAACTGAATACAAGGGACATGCCGTAGAAGAAATGGAGAGAAAAGATCAATGCATAGTATATTCTGGGATCAATGAGGTTTTGGAAGATGCAAGAAAAGATGACACTGAACCTCCTCAAGAAAGCAATGGATGTCAAGGGACGAGGGAGGGTGTTGAACATTCAGAGAAGAAAGTGGGGAAGCAGATTGTGGTATACCATGAGAAGAACAGTAGAGGGCGAAATAGTCAAAAAAGTAGGGTGATTGTACTGGGTTTGATGGCTGCATCAAATTATCCATGGCTGAAGGCAAAAGAGGTCGAGAAACCTAAATCAAATGGTGGTATAAAACGGAAGAAAACAGATGGTATGAGTGAAAGAAAACAGAAAAAACCAGGTGGTGGTGTAAGTGAATGCAAACCGAAAACACCTGATTTTAAATGTGAGACAGAAGGATCTAATTCTACTGCCCAAGGTACAAGCCAGCAGCTTGTTATTAGGGATGAGGATGTGACTCCAATATCATGTTATACACATGTGTGCCCTCCTCCTTTTGGTCAGAGTAGTTCAAGCAATGAAGTTCGTGATGATGGTGCAATTGTCACCCGAAACAAGGTGAGGGAGACATTGCGGCTTTTTCAAGCTGTTTATAGGAAGCTCTTGCAGGAGGATGAAGCAAAGTCAAAGGAAGGAGGCAACTCCCGCAGAAGGTTTGATCTTCAAGCAGCAAAGATCCTCAAGGAAAAAGGAAAATACGTAAATCTTGGCAAACAAATCTTGGGAGCTGTTCCAGGAGTGGAAGTCGGTGATGAGTTTCATTATAGAGTGGAACTTAATATGATTGGCCTACACCGCCAAATTCAAGGTGGTATAGATTATGTTAGGCATGGGGGGACAATCCTTGCTACCAGTATTGTTGCATCAGGGGGGTATGCTGATGCTTTGGATAATTCAAGTTCCGTGATTTATACGGGCCAAGGAGGAAATGTGATAAATACAGAAAAAGAACCTGAAGATCAGAAGCTTGAACGGGGAAACCTTGCTTTGAAGAATAGTCTGCATGAAAAGAATCCTGTTAGAGTGATTCGTGGGTCTGAATCATCAGATGGCAAATCTAGGACATATGTCTATGACGGGCTATATTTGGTAGAGAAATGTTGGCAAGATTTGGGGCCTCATAATAAGCTGGTTTATAAGTTTCAGCTGGACAGAATAGGGGGTCAACCAGAGCTTGCTTGGAAAGAACTGAAGAAGTCCAAAAAATTTCAAATACGTGAAGGTATCTGTGTCGATGATATTTCAGGAGGCAAAGAGTCAATTCCTATCTGTGCTATGAATACCATAGACGATGAGAAACCTCCATCATTCGAATACATAACTAGTGTGATATATCCTGATTGGTGTCGCCCGCTTCCTCCCAAGGGTTGTAGCTGTACTGCTGGATGCTCGGACTCTGAGAAATGTTCTTGTGCAGTTAAGAATGGAGGTGAGATCCCATTTAACTTTAATGGGGCTATTGTTGAAGCTAAGCCCCTTGTGTATGAGTGTGGTCCTTCTTGCAAGTGTCCTCCTTGTTGCCATAATAGAGTTAGCCAGTATGGTATCAAGTTTCAGCTTGAAATTTTTAAAACTAAATCAATGGGATGGGGGGTGAGATCCCTTAATTCCATTCCTTCAGGAAGTTTTATTTGTGAGTATATAGGAGAGCTCCTTGAAGAGAAGGAAGCTGAAGCAAGAGCTGGTAATGATGAGTATCTGTTTGATATTGGGAATACCTACATTGATAATTCTCTTTGGGATGGACTTTCGACACTCATGCCTGATGCACAGTCAAGTTCTTATGAAGTTGTGGAGGAAGGTAGCTTCACCATTGATGCTGCACGGAAAGGCAATTTGGGGAGATTTATCAACCATAGTTGTTCCCCCAATCTTTATGCCCAAAATGTCCTTTATGATCATGAGGACAACAGAATTCCTCACATTATGTTCTTTGCTGCTGAGAACATTCCTCCGTTGCAAGAGTTGACTTATCATTACAATTATATAATGGATCAGGTTCATGATTCCAATGGCAACATAAAGAAGAAGAATTGCTATTGCGGTTCTCCAGAGTGCACTGGCAGGCTGTATTGA

Protein Analysis

1044

Amino Acids

114.76

Weight (kDa)

5.47

Isoelectric Point (pI)

41.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SAD_SRA PF02182 593 - 741 2e-52 SAD/SRA domain
Pre-SET PF05033 768 - 862 3e-21 Pre-SET motif
SET PF00856 881 - 1013 1.6e-22 SET domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000355)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G22740 AT2G22740 AT2G35160 AT2G35160 AT2G35160 AT2G35160 AT2G35160
fragaria_vesca FvH4_5g20100 FvH4_5g20130 FvH4_5g20130 FvH4_5g20130 FvH4_5g20130 FvH4_5g20130 FvH4_5g20150 FvH4_5g25380 FvH4_5g30731 FvH4_5g30740
malus_domestica MD03G1258900.v1.1 MD04G1052400.v1.1 MD11G1279700.v1.1
prunus_persica Prupe.2G064400_v2.0.a1 Prupe.5G057000_v2.0.a1 Prupe.5G057400_v2.0.a1
pyrus_communis pycom03g20690 pycom04g04620 pycom11g24730
rosa_chinensis RchiOBHm_Chr7g0204991 RchiOBHm_Chr7g0205081 RchiOBHm_Chr7g0205121 RchiOBHm_Chr7g0205131 RchiOBHm_Chr7g0215601 RchiOBHm_Chr7g0225631
rosa_laevigata RLG00000001799 RLG00000002623 RLG00000002644 RLG00000003398 RLG00000003403 RLG00000003417 RLG00000034641
rosa_multiflora Rmu_co8235369.1_g000001 Rmu_co8353775.1_g000001 Rmu_co8458607.1_g000001 Rmu_sc0000898.1_g000043 Rmu_sc0000898.1_g000048 Rmu_sc0001072.1_g000001 Rmu_sc0001072.1_g000002 Rmu_sc0003876.1_g000010 Rmu_sc0005112.1_g000021 Rmu_sc0007602.1_g000010 Rmu_sc0009349.1_g000014 Rmu_sc0020855.1_g000001 Rmu_sc0023402.1_g000001 Rmu_sc0024226.1_g000004
rosa_roxburghii Rroxscaffold_3G00233620 Rroxscaffold_3G00244060 Rroxscaffold_3G00252560 Rroxscaffold_3G00252590 Rroxscaffold_3G00252620
rosa_rugosa Rorug07G0086900 Rorug07G0087000 Rorug07G0087000 Rorug07G0087400 Rorug07G0087500 Rorug07G0087600 Rorug07G0087700 Rorug07G0087800 Rorug07G0088100 Rorug07G0095600.1 Rorug07G0095700.1 Rorug07G0095800.1 Rorug07G0095900 Rorug07G0096000 Rorug07G0096100 Rorug07G0155000 Rorug07G0232100
rosa_samantha Rh7AG217900 Rh7AG218400 Rh7AG219000 Rh7AG291200 Rh7AG371700 Rh7BG214800 Rh7BG215000 Rh7BG215500 Rh7BG223800 Rh7BG224400 Rh7BG283300 Rh7BG283800 Rh7BG366000 Rh7CG231100 Rh7CG231600 Rh7CG232000 Rh7CG241100 Rh7CG311200 Rh7CG390400 Rh7DG225200 Rh7DG225900 Rh7DG226400 Rh7DG295000 Rh7DG376800
rosa_wichuraiana Rw0G004730 Rw7G018880 Rw7G018900 Rw7G018920 Rw7G018940 Rw7G018960 Rw7G024860 Rw7G031790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2193
Acc65I GGTACC 1 cut(s) 251
AccB1I GGYRCC 1 cut(s) 251
AccB7I CCANNNNNTGG 1 cut(s) 1400
AccI GTMKAC 1 cut(s) 1215
AccII CGCG 1 cut(s) 854
AclWI GGATC 8 cut(s) 464, 544, 1097, 1462, 1726, 2485, 2649, 3057
AcsI RAATTY 5 cut(s) 865, 1857, 2261, 2619, 2970
AcuI CTGAAG 7 cut(s) 96, 1020, 1325, 2031, 2267, 2658, 2748
AfaI GTAC 9 cut(s) 226, 240, 253, 294, 481, 607, 1269, 1477, 2434
AflIII ACRYGT 2 cut(s) 802, 1534
AhlI ACTAGT 1 cut(s) 2378
AjnI CCWGG 3 cut(s) 860, 1393, 1789
AjuI GAANNNNNNNTTGG 6 cut(s) 11, 43, 258, 290, 2876, 2908
AleI CACNNNNGTG 1 cut(s) 1537
AloI GAACNNNNNNTCC 4 cut(s) 183, 215, 1002, 1034
Alw21I GWGCWC 2 cut(s) 2709, 3116
Alw26I GTCTC 4 cut(s) 163, 811, 1439, 1616
Alw44I GTGCAC 1 cut(s) 3112
AlwI GGATC 8 cut(s) 464, 544, 1097, 1462, 1726, 2485, 2649, 3057
AlwNI CAGNNNCTG 1 cut(s) 473
AoxI GGCC 4 cut(s) 858, 1843, 1972, 2171
ApaLI GTGCAC 1 cut(s) 3112
ApeKI GCWGC 7 cut(s) 776, 848, 1283, 1486, 1724, 2876, 2993
ApoI RAATTY 5 cut(s) 865, 1857, 2261, 2619, 2970
Asp700I GAANNNNTTC 2 cut(s) 730, 966
Asp718I GGTACC 1 cut(s) 251
AspS9I GGNCC 3 cut(s) 1972, 2171, 2549
AsuC2I CCSGG 1 cut(s) 183
AsuII TTCGAA 1 cut(s) 2367
AvaII GGWCC 1 cut(s) 2549
BaeGI GKGCMC 2 cut(s) 1544, 3116
BanI GGYRCC 1 cut(s) 251
BanII GRGCYC 1 cut(s) 2709
BbsI GAAGAC 1 cut(s) 805
Bbv12I GWGCWC 2 cut(s) 2709, 3116
BbvI GCAGC 7 cut(s) 788, 835, 1270, 1498, 1736, 2863, 2980
BceAI ACGGC 1 cut(s) 1028
BcgI CGANNNNNNTGC 2 cut(s) 2797, 2831
BciT130I CCWGG 3 cut(s) 862, 1395, 1791
BclI TGATCA 2 cut(s) 487, 2953
BcnI CCSGG 1 cut(s) 183
BcoDI GTCTC 4 cut(s) 163, 811, 1439, 1616
BcuI ACTAGT 1 cut(s) 2378
BfaI CTAG 4 cut(s) 42, 635, 2115, 2379
BfmI CTRYAG 1 cut(s) 774
BglI GCCNNNNNGGC 1 cut(s) 857
BisI GCNGC 9 cut(s) 777, 849, 852, 1284, 1487, 1631, 1725, 2877, 2994
BlpI GCTNAGC 1 cut(s) 2526
BlsI GCNGC 9 cut(s) 778, 850, 853, 1285, 1488, 1632, 1726, 2878, 2995
Bme1390I CCNGG 4 cut(s) 183, 862, 1395, 1791
Bme18I GGWCC 1 cut(s) 2549
BmgT120I GGNCC 3 cut(s) 1972, 2171, 2549
BmiI GGNNCC 4 cut(s) 253, 372, 708, 2172
BmrFI CCNGG 4 cut(s) 183, 862, 1395, 1791
BmrI ACTGGG 2 cut(s) 123, 1280
BmuI ACTGGG 2 cut(s) 123, 1280
BoxI GACNNNNGTC 1 cut(s) 2123
BpiI GAAGAC 1 cut(s) 805
BpmI CTGGAG 2 cut(s) 1029, 3090
Bpu1102I GCTNAGC 1 cut(s) 2526
Bpu14I TTCGAA 1 cut(s) 2367
BpuEI CTTGAG 3 cut(s) 956, 1122, 1721
BpuMI CCSGG 1 cut(s) 183
BsaAI YACGTR 2 cut(s) 1756, 2273
BsaBI GATNNNNATC 1 cut(s) 2751
BsaJI CCNNGG 5 cut(s) 852, 1298, 1471, 1975, 2418
Bse1I ACTGG 8 cut(s) 129, 255, 374, 1012, 1275, 1908, 2593, 3121
Bse3DI GCAATG 3 cut(s) 1153, 1579, 1625
Bse8I GATNNNNATC 1 cut(s) 2751
BseBI CCWGG 3 cut(s) 862, 1395, 1791
BseDI CCNNGG 5 cut(s) 852, 1298, 1471, 1975, 2418
BseJI GATNNNNATC 1 cut(s) 2751
BseMI GCAATG 3 cut(s) 1153, 1579, 1625
BseMII CTCAG 7 cut(s) 245, 299, 486, 570, 822, 2445, 2988
BseNI ACTGG 8 cut(s) 129, 255, 374, 1012, 1275, 1908, 2593, 3121
BseRI GAGGAG 3 cut(s) 783, 1125, 1536
BseSI GKGCMC 2 cut(s) 1544, 3116
BseXI GCAGC 7 cut(s) 788, 835, 1270, 1498, 1736, 2863, 2980
BseYI CCCAGC 1 cut(s) 314
BsgI GTGCAG 2 cut(s) 2490, 2862
Bsh1236I CGCG 1 cut(s) 854
BshFI GGCC 4 cut(s) 860, 1845, 1974, 2173
BshNI GGYRCC 1 cut(s) 251
BsiHKAI GWGCWC 2 cut(s) 2709, 3116
BsiSI CCGG 1 cut(s) 182
BslFI GGGAC 4 cut(s) 833, 1050, 1174, 1906
BsmAI GTCTC 4 cut(s) 163, 811, 1439, 1616
BsmFI GGGAC 4 cut(s) 833, 1050, 1174, 1906
BsmI GAATGC 3 cut(s) 850, 925, 1418
BsnI GGCC 4 cut(s) 860, 1845, 1974, 2173
Bsp119I TTCGAA 1 cut(s) 2367
Bsp1286I GDGCHC 3 cut(s) 1544, 2709, 3116
Bsp1720I GCTNAGC 1 cut(s) 2526
Bsp19I CCATGG 1 cut(s) 1298
BspANI GGCC 4 cut(s) 860, 1845, 1974, 2173
BspCNI CTCAG 7 cut(s) 244, 298, 487, 569, 821, 2446, 2989
BspFNI CGCG 1 cut(s) 854
BspHI TCATGA 2 cut(s) 2956, 3058
BspLI GGNNCC 4 cut(s) 253, 372, 708, 2172
BspMAI CTGCAG 1 cut(s) 778
BspPI GGATC 8 cut(s) 464, 544, 1097, 1462, 1726, 2485, 2649, 3057
BspQI GCTCTTC 1 cut(s) 870
BspT104I TTCGAA 1 cut(s) 2367
BspT107I GGYRCC 1 cut(s) 251
BsrDI GCAATG 3 cut(s) 1153, 1579, 1625
BsrI ACTGG 8 cut(s) 129, 255, 374, 1012, 1275, 1908, 2593, 3121
BssECI CCNNGG 5 cut(s) 852, 1298, 1471, 1975, 2418
BssNAI GTATAC 1 cut(s) 1216
BssT1I CCWWGG 4 cut(s) 1298, 1471, 1975, 2418
Bst1107I GTATAC 1 cut(s) 1216
Bst2UI CCWGG 3 cut(s) 862, 1395, 1791
Bst4CI ACNGT 5 cut(s) 49, 610, 619, 1232, 2829
Bst6I CTCTTC 4 cut(s) 693, 736, 870, 2709
BstBAI YACGTR 2 cut(s) 1756, 2273
BstBI TTCGAA 1 cut(s) 2367
BstC8I GCNNGC 4 cut(s) 1484, 2232, 2408, 3122
BstDSI CCRYGG 2 cut(s) 852, 1298
BstFNI CGCG 1 cut(s) 854
BstMAI GTCTC 4 cut(s) 163, 811, 1439, 1616
BstMWI GCNNNNNNNGC 3 cut(s) 857, 1701, 1851
BstNI CCWGG 3 cut(s) 862, 1395, 1791
BstNSI RCATGY 3 cut(s) 806, 1043, 1538
BstPAI GACNNNNGTC 1 cut(s) 2123
BstSCI CCNGG 4 cut(s) 181, 860, 1393, 1789
BstSFI CTRYAG 1 cut(s) 774
BstSLI GKGCMC 2 cut(s) 1544, 3116
BstSNI TACGTA 1 cut(s) 1756
BstUI CGCG 1 cut(s) 854
BstV1I GCAGC 7 cut(s) 788, 835, 1270, 1498, 1736, 2863, 2980
BstV2I GAAGAC 1 cut(s) 805
BstX2I RGATCY 5 cut(s) 469, 1454, 1731, 2490, 2654
BstYI RGATCY 5 cut(s) 469, 1454, 1731, 2490, 2654
BstZ17I GTATAC 1 cut(s) 1216
BsuRI GGCC 4 cut(s) 860, 1845, 1974, 2173
BtgI CCRYGG 2 cut(s) 852, 1298
BtgZI GCGATG 1 cut(s) 39
BtsIMutI CAGTG 3 cut(s) 262, 1125, 3114
Cac8I GCNNGC 4 cut(s) 1484, 2232, 2408, 3122
CaiI CAGNNNCTG 1 cut(s) 473
CciI TCATGA 2 cut(s) 2956, 3058
Cfr13I GGNCC 3 cut(s) 1972, 2171, 2549
Cfr42I CCGCGG 1 cut(s) 855
CsiI ACCWGGT 1 cut(s) 1393
Csp6I GTAC 9 cut(s) 225, 239, 252, 293, 480, 606, 1268, 1476, 2433
CviQI GTAC 9 cut(s) 225, 239, 252, 293, 480, 606, 1268, 1476, 2433
DraI TTTAAA 2 cut(s) 1438, 2626
Eam1104I CTCTTC 4 cut(s) 693, 736, 870, 2709
EarI CTCTTC 4 cut(s) 693, 736, 870, 2709
EciI GGCGGA 1 cut(s) 168
Ecl136II GAGCTC 1 cut(s) 2707
Eco105I TACGTA 1 cut(s) 1756
Eco130I CCWWGG 4 cut(s) 1298, 1471, 1975, 2418
Eco24I GRGCYC 1 cut(s) 2709
Eco32I GATATC 1 cut(s) 788
Eco47I GGWCC 1 cut(s) 2549
Eco53kI GAGCTC 1 cut(s) 2707
Eco57I CTGAAG 7 cut(s) 96, 1020, 1325, 2031, 2267, 2658, 2748
EcoICRI GAGCTC 1 cut(s) 2707
EcoO109I RGGNCCY 1 cut(s) 2171
EcoRI GAATTC 1 cut(s) 2970
EcoRII CCWGG 3 cut(s) 860, 1393, 1789
EcoRV GATATC 1 cut(s) 788
EcoT14I CCWWGG 4 cut(s) 1298, 1471, 1975, 2418
EcoT22I ATGCAT 2 cut(s) 933, 1076
EcoT38I GRGCYC 1 cut(s) 2709
ErhI CCWWGG 4 cut(s) 1298, 1471, 1975, 2418
FaqI GGGAC 4 cut(s) 833, 1050, 1174, 1906
FauI CCCGC 5 cut(s) 30, 411, 503, 1709, 2415
FauNDI CATATG 1 cut(s) 2122
FbaI TGATCA 2 cut(s) 487, 2953
FblI GTMKAC 1 cut(s) 1215
Fnu4HI GCNGC 9 cut(s) 777, 849, 852, 1284, 1487, 1631, 1725, 2877, 2994
FriOI GRGCYC 1 cut(s) 2709
Fsp4HI GCNGC 9 cut(s) 777, 849, 852, 1284, 1487, 1631, 1725, 2877, 2994
FspBI CTAG 4 cut(s) 42, 635, 2115, 2379
GluI GCNGC 9 cut(s) 777, 849, 852, 1284, 1487, 1631, 1725, 2877, 2994
GsaI CCCAGC 1 cut(s) 318
GsuI CTGGAG 2 cut(s) 1029, 3090
HaeIII GGCC 4 cut(s) 860, 1845, 1974, 2173
HapII CCGG 1 cut(s) 182
HincII GTYRAC 2 cut(s) 2222, 3024
HindII GTYRAC 2 cut(s) 2222, 3024
HindIII AAGCTT 2 cut(s) 267, 2021
HpaII CCGG 1 cut(s) 182
Hpy166II GTNNAC 6 cut(s) 293, 544, 1216, 2222, 3024, 3114
Hpy8I GTNNAC 6 cut(s) 293, 544, 1216, 2222, 3024, 3114
HpyCH4III ACNGT 5 cut(s) 49, 610, 619, 1232, 2829
HpyCH4IV ACGT 2 cut(s) 1755, 2272
HpyF10VI GCNNNNNNNGC 3 cut(s) 857, 1701, 1851
HpySE526I ACGT 2 cut(s) 1755, 2272
KpnI GGTACC 1 cut(s) 255
Ksp22I TGATCA 2 cut(s) 487, 2953
KspI CCGCGG 1 cut(s) 855
LguI GCTCTTC 1 cut(s) 870
LmnI GCTCC 3 cut(s) 370, 1781, 2712
Lsp1109I GCAGC 7 cut(s) 788, 835, 1270, 1498, 1736, 2863, 2980
MabI ACCWGGT 1 cut(s) 1393
MaeI CTAG 4 cut(s) 42, 635, 2115, 2379
MaeII ACGT 2 cut(s) 1755, 2272
MaeIII GTNAC 5 cut(s) 353, 893, 1003, 1510, 1600
MfeI CAATTG 2 cut(s) 453, 1596
MflI RGATCY 5 cut(s) 469, 1454, 1731, 2490, 2654
MhlI GDGCHC 3 cut(s) 1544, 2709, 3116
MlyI GAGTC 4 cut(s) 26, 1507, 2321, 2444
MmeI TCCRAC 1 cut(s) 864
Mph1103I ATGCAT 2 cut(s) 933, 1076
MroXI GAANNNNTTC 2 cut(s) 730, 966
MslI CAYNNNNRTG 1 cut(s) 1537
MspA1I CMGCKG 4 cut(s) 560, 812, 854, 2203
MspI CCGG 1 cut(s) 182
MspR9I CCNGG 4 cut(s) 183, 862, 1395, 1791
MunI CAATTG 2 cut(s) 453, 1596
Mva1269I GAATGC 3 cut(s) 850, 925, 1418
MvaI CCWGG 3 cut(s) 862, 1395, 1791
MvnI CGCG 1 cut(s) 854
MwoI GCNNNNNNNGC 3 cut(s) 857, 1701, 1851
NciI CCSGG 1 cut(s) 183
NcoI CCATGG 1 cut(s) 1298
NdeI CATATG 1 cut(s) 2122
NlaIV GGNNCC 4 cut(s) 253, 372, 708, 2172
NmuCI GTSAC 4 cut(s) 353, 893, 1510, 1600
NsiI ATGCAT 2 cut(s) 933, 1076
NspI RCATGY 3 cut(s) 806, 1043, 1538
NspV TTCGAA 1 cut(s) 2367
OliI CACNNNNGTG 1 cut(s) 1537
PagI TCATGA 2 cut(s) 2956, 3058
PciI ACATGT 2 cut(s) 802, 1534
PciSI GCTCTTC 1 cut(s) 870
PctI GAATGC 3 cut(s) 850, 925, 1418
PdmI GAANNNNTTC 2 cut(s) 730, 966
PfeI GAWTC 7 cut(s) 260, 424, 578, 2068, 2083, 2096, 3062
PflMI CCANNNNNTGG 1 cut(s) 1400
PfoI TCCNGGA 1 cut(s) 1789
PkrI GCNGC 9 cut(s) 778, 850, 853, 1285, 1488, 1632, 1726, 2878, 2995
PleI GAGTC 4 cut(s) 26, 1507, 2320, 2444
PpsI GAGTC 4 cut(s) 26, 1507, 2320, 2444
Ppu21I YACGTR 2 cut(s) 1756, 2273
PscI ACATGT 2 cut(s) 802, 1534
PshAI GACNNNNGTC 1 cut(s) 2123
PsiI TTATAA 1 cut(s) 2193
Psp124BI GAGCTC 1 cut(s) 2709
Psp6I CCWGG 3 cut(s) 860, 1393, 1789
PspFI CCCAGC 1 cut(s) 314
PspGI CCWGG 3 cut(s) 860, 1393, 1789
PspN4I GGNNCC 4 cut(s) 253, 372, 708, 2172
PspPI GGNCC 3 cut(s) 1972, 2171, 2549
PstI CTGCAG 1 cut(s) 778
PstNI CAGNNNCTG 1 cut(s) 473
PsuI RGATCY 5 cut(s) 469, 1454, 1731, 2490, 2654
PvuII CAGCTG 3 cut(s) 560, 812, 2203
RsaI GTAC 9 cut(s) 226, 240, 253, 294, 481, 607, 1269, 1477, 2434
RsaNI GTAC 9 cut(s) 225, 239, 252, 293, 480, 606, 1268, 1476, 2433
RseI CAYNNNNRTG 1 cut(s) 1537
SacI GAGCTC 1 cut(s) 2709
SacII CCGCGG 1 cut(s) 855
SapI GCTCTTC 1 cut(s) 870
SatI GCNGC 9 cut(s) 777, 849, 852, 1284, 1487, 1631, 1725, 2877, 2994
Sau96I GGNCC 3 cut(s) 1972, 2171, 2549
SchI GAGTC 4 cut(s) 26, 1507, 2321, 2444
ScrFI CCNGG 4 cut(s) 183, 862, 1395, 1791
SduI GDGCHC 3 cut(s) 1544, 2709, 3116
SexAI ACCWGGT 1 cut(s) 1393
SfcI CTRYAG 1 cut(s) 774
Sfr303I CCGCGG 1 cut(s) 855
SfuI TTCGAA 1 cut(s) 2367
SgrBI CCGCGG 1 cut(s) 855
SinI GGWCC 1 cut(s) 2549
SmiMI CAYNNNNRTG 1 cut(s) 1537
SmlI CTYRAG 3 cut(s) 971, 1137, 1736
SmoI CTYRAG 3 cut(s) 971, 1137, 1736
SnaBI TACGTA 1 cut(s) 1756
SpeI ACTAGT 1 cut(s) 2378
SspMI CTAG 4 cut(s) 42, 635, 2115, 2379
SstI GAGCTC 1 cut(s) 2709
StyD4I CCNGG 4 cut(s) 181, 860, 1393, 1789
StyI CCWWGG 4 cut(s) 1298, 1471, 1975, 2418
TaaI ACNGT 5 cut(s) 49, 610, 619, 1232, 2829
TaiI ACGT 2 cut(s) 1758, 2275
TaqI TCGA 5 cut(s) 796, 1320, 2289, 2367, 2807
TatI WGTACW 2 cut(s) 1267, 2432
TauI GCSGC 2 cut(s) 854, 1633
TfiI GAWTC 7 cut(s) 260, 424, 578, 2068, 2083, 2096, 3062
TscAI CASTG 3 cut(s) 262, 1132, 3121
TseFI GTSAC 4 cut(s) 353, 893, 1510, 1600
TseI GCWGC 7 cut(s) 776, 848, 1283, 1486, 1724, 2876, 2993
Tsp45I GTSAC 4 cut(s) 353, 893, 1510, 1600
TspGWI ACGGA 4 cut(s) 1366, 1948, 2896, 3000
TspRI CASTG 3 cut(s) 262, 1132, 3121
Van91I CCANNNNNTGG 1 cut(s) 1400
VneI GTGCAC 1 cut(s) 3112
VpaK11BI GGWCC 1 cut(s) 2549
XapI RAATTY 5 cut(s) 865, 1857, 2261, 2619, 2970
XceI RCATGY 3 cut(s) 806, 1043, 1538
XcmI CCANNNNNNNNNTGG 2 cut(s) 1862, 2232
XmiI GTMKAC 1 cut(s) 1215
XmnI GAANNNNTTC 2 cut(s) 730, 966
XspI CTAG 4 cut(s) 42, 635, 2115, 2379
Zsp2I ATGCAT 2 cut(s) 933, 1076
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.