RchiOBHm_Chr7g0215601

histone-lysine N-methyltransferase, H3 lysine-9 specific

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Forward (+)
33302235 .. 33310263
8029 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ19290

Sequence Viewer

Length: 3177 bp
ATGGGGGTTGTAGAGGCGAACCCGCATCTGGACTCATCATCTAGGACAGTAGCATCGCTTAATGGCAGTCATTCTGAAGCAAGATTAGGCAAGAAGCCAATGGAAGTTGGTGAGTGTTCTTACCGCCCCAGTTCGGCTAAGATTAAGAGGCGAATAGTCTCTGCTGTTCGTGATTTTCCGCCGGGTTGTGGAAGAAATGTTCCCTTAAACAATGCCATTGCTGGTACTTCTCAGAATGTACCAATAGAGGGTACCAGTGAATTGGAAGCTTTTGCTGGTGCTTCTCAGAGTGTACTGATAGAAAACTCGGTTGCTGGGGATAGAATTGATGATGGAAATGAAGTGGATGATAGTGGCTTGATGAATATGGAGCCAGTTGTGAGAGGAACAGCCTTAGAAGATGAAGTATTTGATTTGCGGGAGAATCCGCATCAGTTAAGCAACAATTTGACAATTGTTGAAGGGGCAGGTCCTGTTGGTACTAATGATCAGGCTGAGAAGTTGATTAGCGGGGATAGAACTGATGATGGACAAAAAGTTGTAAACTTGATCCTCTCAGCTGGTCAGGTGGGTGGTGATTCTGACTTGATGAATAGGGCTGTTGGTACTGTGGAAACAGTTGAATTAACAGCCCTAGAGCATGAAGTATCTGATTTGTCAAAGAACCCTCATCTGGTGTGTGTGGTTACACCGGATGAAGAGATGGTTCCTGTGCTGTCAAATAGTAACTCTTCTTCCATTTCAGTTTCTAATGTCAATGGTCAGGAAAAGACTGCAGCGAGAAGATATCCTCCTCGAAGACATGTCTCAGCTGTTCGGGACTTCCCTCCTTTTTGCGGAAGGAATGCTGCCGCGGAGGCCAGGAATTTTGGTGAAGAGCAGTCGGATATGGGTGACAAACCATCCTCATCAAATATGAATACCATCAAGCAACAAGCCAGAGAGGATGACGTTAAGGAGGAAGAGTTTCACGAGAATGAATTGGGAGGGAATGTTTCTGAAGCAACTGGAGGTGGAGTTCAAACTGAATACAAGGGACATGCCGTAGAAGAAATGGAGAGAAAAGATCAATGCATTGTATATTCTGGGATCAATGAGGTTTCAGAAGATACAAGAAAAGATGTCATTGAACCTCCTCAAGAAAGCAATGGATGTCAAGGGACGAGGGAGGATGTTGAACATTCAGAGAAGAAAGTGGGGAAGCAGATTGTGGTATACCATGAGAAGAACAGTCGAGGGCGAAATAGTCAAAAAAGTAGGGTGATTGTACTGGGTTTGATGGCTGCATCAAATTATCCATGGCTCAAGGCAAAAGAGGTCGAGAAACCTAAATCAAATGGTGGTATGAGTGAAAGCAAACAGAAGAAACCAGATGGTGGTATGAGTGGAAGAAAACGGAAGAAAACAGATGGTATGAGTGAAAGAAAACAGAAAAACCCAGGTGGTGGTGTAAGTGAATGCAAACCAAAAACACCTGATTTTAAATGTGAGTCAGAAGGATTTAATTCTACTGCCCAAGGTACAAGCCAGCAGCTTGTTATTAGGGATGAGGATGCGATTCCAATATCATGTTATACACATGTGTGCCCTCCTCCTTTTGGTCAGATTAGTTCAAGCATTGAAGTTCGTGATGATGGTGCAATTGTCACCCGAAACAAGGTGAGGGAGACATTGCGGCTTTTTCAAGCTGTTTATAGGAAGCTCTTGCAGGAGGATGAAGCGAAGTCAAAGGAAGGAGGCAACTCCCGCAGAAGGTTTGATCTTCAAGCAGCAAAGATCCTCAAGGAAAAAGGAAAATACGTAAATCTTGGCAAACAAATCTTGGGAGCTGTTCCAGGAGTGGAAGTCGGTGATGAGTTTCATTATAGAGTGGAACTTAATATGATTGGCCTACACCGCCAAATTCAAGGTGGTATAGATTATGTTAGGCATGGGGGGACAATCCTTGCTACCAGTATTGTTGCATCAGGGGGGTATGCTGATGCTTTGGATAATTCAAGTTCCTTGATTTATACAGGCCAAGGAGGAAATGTGATAAATACAGAAAAGGAACCTGAAGATCAGAAGCTTGAACGGGGAAACCTTGCTTTGAAGAATAGTCTGCATGAAAAGAATCCTGTTAGAGTGATTCGTGGGTCTGAATCATCAGATGGAAAATCTAGGACATATGTCTATGACGGGCTATATTTGGTAGAGAAATGTTGGCAAGATTTGGGGCCTCATAATAAGCTGGTTTATAAGTTTCAGCTGGACAGAATTGGGGGTCAACCAGAGCTTGCTTGGAAAGAACTGAAGAAGTCCAAAAAATTTCAAATACGTGAAGGTATCTGTGTCGATGATATTTCAGGAGGCAAAGAGTCAATTCCTATCTGTGCTATGAATACCATAGACGATGAGAAACCTCCATCATTCGAATACATAACTAGTGTGATATATCCTGATTGGTGCCGCCCGCTTCCTCCCAAGGGTTGTAGCTGTACTGCTGGATGCTCGGACTCTGAGAAATGTTCTTGTGCAGTTAAGAATGGAGGTGAGATCCCATTTAACTTTAATGGGGCTATTGTTGAAGCTAAGCCCCTTGTGTATGAGTGTGGTCCTTCTTGCAAGTGTCCTCCTTCTTGCCATAATAGAGTTAGCCAGTATGGTATCAAGTTTCATCTTGAAATTTTTAAAACTAAATCAATGGGATGGGGGGTGAGATCCCTTAATTCCATTCCTTCAGGAAGTTTTATTTGTGAGTATATAGGAGAGCTCCTTGAAGAGAAGGAAGCTGAAGCAAGAGCTGGTAATGATGAGTATCTGTTTGATATTGGGAATAACTACAATGATAATTCTCTTTGGGATGGACTTTCGACACTCATGCCTGATGCACACTCAAGTTCTTATGAAGTTGTGGAGGAAGGTAGCTTCACCATTGATGCTGCACGGAAAGGCAATTTGGGGAGATTTATCAACCATAGTTGTTCCCCTAATCTTTATGCCCAAAATGTCCTTTATGATCATGAGGACAACAGAATTCCTCACATTATGTTCTTTGCCGCTGAGAACATTCCTCCGTTGCAAGAGTTGACTTATCATTACAATTATATAATGGATCAGGTTCATGATTCCAATGGCAATATAAAGAAGAAGAATTGCTATTGCGGTTCTCCAGAGTGCACTGGCAGGCTGTATTGA

Protein Analysis

1058

Amino Acids

116.15

Weight (kDa)

5.52

Isoelectric Point (pI)

43.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SAD_SRA PF02182 608 - 756 1.6e-52 SAD/SRA domain
Pre-SET PF05033 783 - 877 1.4e-22 Pre-SET motif
SET PF00856 896 - 1028 9.2e-23 SET domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000355)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G22740 AT2G22740 AT2G35160 AT2G35160 AT2G35160 AT2G35160 AT2G35160
fragaria_vesca FvH4_5g20100 FvH4_5g20130 FvH4_5g20130 FvH4_5g20130 FvH4_5g20130 FvH4_5g20130 FvH4_5g20150 FvH4_5g25380 FvH4_5g30731 FvH4_5g30740
malus_domestica MD03G1258900.v1.1 MD04G1052400.v1.1 MD11G1279700.v1.1
prunus_persica Prupe.2G064400_v2.0.a1 Prupe.5G057000_v2.0.a1 Prupe.5G057400_v2.0.a1
pyrus_communis pycom03g20690 pycom04g04620 pycom11g24730
rosa_chinensis RchiOBHm_Chr7g0204991 RchiOBHm_Chr7g0205081 RchiOBHm_Chr7g0205121 RchiOBHm_Chr7g0205131 RchiOBHm_Chr7g0215601 RchiOBHm_Chr7g0225631
rosa_laevigata RLG00000001799 RLG00000002623 RLG00000002644 RLG00000003398 RLG00000003403 RLG00000003417 RLG00000034641
rosa_multiflora Rmu_co8235369.1_g000001 Rmu_co8353775.1_g000001 Rmu_co8458607.1_g000001 Rmu_sc0000898.1_g000043 Rmu_sc0000898.1_g000048 Rmu_sc0001072.1_g000001 Rmu_sc0001072.1_g000002 Rmu_sc0003876.1_g000010 Rmu_sc0005112.1_g000021 Rmu_sc0007602.1_g000010 Rmu_sc0009349.1_g000014 Rmu_sc0020855.1_g000001 Rmu_sc0023402.1_g000001 Rmu_sc0024226.1_g000004
rosa_roxburghii Rroxscaffold_3G00233620 Rroxscaffold_3G00244060 Rroxscaffold_3G00252560 Rroxscaffold_3G00252590 Rroxscaffold_3G00252620
rosa_rugosa Rorug07G0086900 Rorug07G0087000 Rorug07G0087000 Rorug07G0087400 Rorug07G0087500 Rorug07G0087600 Rorug07G0087700 Rorug07G0087800 Rorug07G0088100 Rorug07G0095600.1 Rorug07G0095700.1 Rorug07G0095800.1 Rorug07G0095900 Rorug07G0096000 Rorug07G0096100 Rorug07G0155000 Rorug07G0232100
rosa_samantha Rh7AG217900 Rh7AG218400 Rh7AG219000 Rh7AG291200 Rh7AG371700 Rh7BG214800 Rh7BG215000 Rh7BG215500 Rh7BG223800 Rh7BG224400 Rh7BG283300 Rh7BG283800 Rh7BG366000 Rh7CG231100 Rh7CG231600 Rh7CG232000 Rh7CG241100 Rh7CG311200 Rh7CG390400 Rh7DG225200 Rh7DG225900 Rh7DG226400 Rh7DG295000 Rh7DG376800
rosa_wichuraiana Rw0G004730 Rw7G018880 Rw7G018900 Rw7G018920 Rw7G018940 Rw7G018960 Rw7G024860 Rw7G031790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2238
Acc36I ACCTGC 1 cut(s) 458
Acc65I GGTACC 1 cut(s) 251
AccB1I GGYRCC 2 cut(s) 251, 2445
AccB7I CCANNNNNTGG 2 cut(s) 1376, 1445
AccI GTMKAC 1 cut(s) 1215
AccII CGCG 1 cut(s) 854
AclWI GGATC 6 cut(s) 544, 1097, 1771, 2530, 2694, 3102
AcsI RAATTY 5 cut(s) 865, 1902, 2306, 2664, 3015
AcuI CTGAAG 6 cut(s) 96, 1020, 2076, 2312, 2703, 2793
AfaI GTAC 9 cut(s) 226, 240, 253, 294, 481, 607, 1269, 1522, 2479
AflIII ACRYGT 2 cut(s) 802, 1579
AhlI ACTAGT 1 cut(s) 2423
AjnI CCWGG 3 cut(s) 860, 1438, 1834
AjuI GAANNNNNNNTTGG 2 cut(s) 2921, 2953
AleI CACNNNNGTG 1 cut(s) 1582
AloI GAACNNNNNNTCC 4 cut(s) 183, 215, 1002, 1034
Alw21I GWGCWC 2 cut(s) 2754, 3161
Alw26I GTCTC 3 cut(s) 163, 811, 1661
Alw44I GTGCAC 1 cut(s) 3157
AlwI GGATC 6 cut(s) 544, 1097, 1771, 2530, 2694, 3102
AlwNI CAGNNNCTG 1 cut(s) 473
AoxI GGCC 4 cut(s) 858, 1888, 2017, 2216
ApaLI GTGCAC 1 cut(s) 3157
ApeKI GCWGC 6 cut(s) 776, 848, 1283, 1531, 1769, 2921
ApoI RAATTY 5 cut(s) 865, 1902, 2306, 2664, 3015
Asp700I GAANNNNTTC 1 cut(s) 966
Asp718I GGTACC 1 cut(s) 251
AspS9I GGNCC 3 cut(s) 470, 2216, 2594
AsuC2I CCSGG 1 cut(s) 183
AsuII TTCGAA 1 cut(s) 2412
AvaII GGWCC 2 cut(s) 470, 2594
BaeGI GKGCMC 2 cut(s) 1589, 3161
BanI GGYRCC 2 cut(s) 251, 2445
BanII GRGCYC 1 cut(s) 2754
BarI GAAGNNNNNNTAC 2 cut(s) 718, 750
BauI CACGAG 1 cut(s) 971
BbsI GAAGAC 1 cut(s) 805
Bbv12I GWGCWC 2 cut(s) 2754, 3161
BbvI GCAGC 6 cut(s) 788, 835, 1270, 1543, 1781, 2908
BceAI ACGGC 1 cut(s) 1028
BcgI CGANNNNNNTGC 2 cut(s) 2842, 2876
BciT130I CCWGG 3 cut(s) 862, 1440, 1836
BclI TGATCA 2 cut(s) 487, 2998
BcnI CCSGG 1 cut(s) 183
BcoDI GTCTC 3 cut(s) 163, 811, 1661
BcuI ACTAGT 1 cut(s) 2423
BfaI CTAG 4 cut(s) 42, 635, 2160, 2424
BfmI CTRYAG 1 cut(s) 774
BfuAI ACCTGC 1 cut(s) 458
BglI GCCNNNNNGGC 1 cut(s) 857
BlpI GCTNAGC 1 cut(s) 2571
Bme1390I CCNGG 4 cut(s) 183, 862, 1440, 1836
Bme18I GGWCC 2 cut(s) 470, 2594
BmgT120I GGNCC 3 cut(s) 470, 2216, 2594
BmiI GGNNCC 6 cut(s) 253, 372, 708, 2052, 2217, 2447
BmrFI CCNGG 4 cut(s) 183, 862, 1440, 1836
BmrI ACTGGG 2 cut(s) 123, 1280
BmuI ACTGGG 2 cut(s) 123, 1280
BoxI GACNNNNGTC 1 cut(s) 2168
BpiI GAAGAC 1 cut(s) 805
BpmI CTGGAG 2 cut(s) 1029, 3135
Bpu1102I GCTNAGC 1 cut(s) 2571
Bpu14I TTCGAA 1 cut(s) 2412
BpuEI CTTGAG 4 cut(s) 1122, 1289, 1766, 2860
BpuMI CCSGG 1 cut(s) 183
BsaAI YACGTR 2 cut(s) 1801, 2318
BsaBI GATNNNNATC 1 cut(s) 2796
BsaJI CCNNGG 6 cut(s) 852, 1298, 1438, 1516, 2020, 2463
BsaWI WCCGGW 1 cut(s) 691
Bse1I ACTGG 8 cut(s) 129, 255, 374, 1012, 1275, 1953, 2638, 3166
Bse3DI GCAATG 3 cut(s) 216, 1153, 1670
Bse8I GATNNNNATC 1 cut(s) 2796
BseBI CCWGG 3 cut(s) 862, 1440, 1836
BseDI CCNNGG 6 cut(s) 852, 1298, 1438, 1516, 2020, 2463
BseJI GATNNNNATC 1 cut(s) 2796
BseMI GCAATG 3 cut(s) 216, 1153, 1670
BseMII CTCAG 7 cut(s) 245, 299, 486, 570, 822, 2490, 3033
BseNI ACTGG 8 cut(s) 129, 255, 374, 1012, 1275, 1953, 2638, 3166
BseRI GAGGAG 3 cut(s) 783, 1125, 1581
BseSI GKGCMC 2 cut(s) 1589, 3161
BseXI GCAGC 6 cut(s) 788, 835, 1270, 1543, 1781, 2908
BseYI CCCAGC 1 cut(s) 314
BsgI GTGCAG 2 cut(s) 2535, 2907
Bsh1236I CGCG 1 cut(s) 854
BshFI GGCC 4 cut(s) 860, 1890, 2019, 2218
BshNI GGYRCC 2 cut(s) 251, 2445
BsiHKAI GWGCWC 2 cut(s) 2754, 3161
BsiSI CCGG 2 cut(s) 182, 692
BslFI GGGAC 4 cut(s) 833, 1050, 1174, 1951
BsmAI GTCTC 3 cut(s) 163, 811, 1661
BsmFI GGGAC 4 cut(s) 833, 1050, 1174, 1951
BsmI GAATGC 2 cut(s) 850, 1463
BsnI GGCC 4 cut(s) 860, 1890, 2019, 2218
Bsp119I TTCGAA 1 cut(s) 2412
Bsp1286I GDGCHC 3 cut(s) 1589, 2754, 3161
Bsp1720I GCTNAGC 1 cut(s) 2571
Bsp19I CCATGG 1 cut(s) 1298
BspANI GGCC 4 cut(s) 860, 1890, 2019, 2218
BspCNI CTCAG 7 cut(s) 244, 298, 487, 569, 821, 2491, 3034
BspFNI CGCG 1 cut(s) 854
BspHI TCATGA 2 cut(s) 3001, 3103
BspLI GGNNCC 6 cut(s) 253, 372, 708, 2052, 2217, 2447
BspMAI CTGCAG 1 cut(s) 778
BspMI ACCTGC 1 cut(s) 458
BspPI GGATC 6 cut(s) 544, 1097, 1771, 2530, 2694, 3102
BspQI GCTCTTC 1 cut(s) 870
BspT104I TTCGAA 1 cut(s) 2412
BspT107I GGYRCC 2 cut(s) 251, 2445
BsrDI GCAATG 3 cut(s) 216, 1153, 1670
BsrI ACTGG 8 cut(s) 129, 255, 374, 1012, 1275, 1953, 2638, 3166
BssECI CCNNGG 6 cut(s) 852, 1298, 1438, 1516, 2020, 2463
BssNAI GTATAC 1 cut(s) 1216
BssSI CACGAG 1 cut(s) 971
BssT1I CCWWGG 4 cut(s) 1298, 1516, 2020, 2463
Bst1107I GTATAC 1 cut(s) 1216
Bst2BI CACGAG 1 cut(s) 971
Bst2UI CCWGG 3 cut(s) 862, 1440, 1836
Bst4CI ACNGT 4 cut(s) 49, 610, 619, 1232
Bst6I CTCTTC 5 cut(s) 693, 736, 870, 957, 2754
BstBAI YACGTR 2 cut(s) 1801, 2318
BstBI TTCGAA 1 cut(s) 2412
BstC8I GCNNGC 4 cut(s) 1529, 2277, 2453, 3167
BstDSI CCRYGG 2 cut(s) 852, 1298
BstFNI CGCG 1 cut(s) 854
BstMAI GTCTC 3 cut(s) 163, 811, 1661
BstMWI GCNNNNNNNGC 3 cut(s) 857, 1746, 1896
BstNI CCWGG 3 cut(s) 862, 1440, 1836
BstNSI RCATGY 3 cut(s) 806, 1043, 1583
BstPAI GACNNNNGTC 1 cut(s) 2168
BstSCI CCNGG 4 cut(s) 181, 860, 1438, 1834
BstSFI CTRYAG 1 cut(s) 774
BstSLI GKGCMC 2 cut(s) 1589, 3161
BstSNI TACGTA 1 cut(s) 1801
BstUI CGCG 1 cut(s) 854
BstV1I GCAGC 6 cut(s) 788, 835, 1270, 1543, 1781, 2908
BstV2I GAAGAC 1 cut(s) 805
BstX2I RGATCY 3 cut(s) 1776, 2535, 2699
BstXI CCANNNNNNTGG 1 cut(s) 262
BstYI RGATCY 3 cut(s) 1776, 2535, 2699
BstZ17I GTATAC 1 cut(s) 1216
BsuRI GGCC 4 cut(s) 860, 1890, 2019, 2218
BtgI CCRYGG 2 cut(s) 852, 1298
BtgZI GCGATG 1 cut(s) 39
BtsIMutI CAGTG 2 cut(s) 262, 3159
BveI ACCTGC 1 cut(s) 458
Cac8I GCNNGC 4 cut(s) 1529, 2277, 2453, 3167
CaiI CAGNNNCTG 1 cut(s) 473
CciI TCATGA 2 cut(s) 3001, 3103
Cfr13I GGNCC 3 cut(s) 470, 2216, 2594
Cfr42I CCGCGG 1 cut(s) 855
Csp6I GTAC 9 cut(s) 225, 239, 252, 293, 480, 606, 1268, 1521, 2478
CviQI GTAC 9 cut(s) 225, 239, 252, 293, 480, 606, 1268, 1521, 2478
DraI TTTAAA 2 cut(s) 1483, 2671
Eam1104I CTCTTC 5 cut(s) 693, 736, 870, 957, 2754
EarI CTCTTC 5 cut(s) 693, 736, 870, 957, 2754
EciI GGCGGA 1 cut(s) 168
Ecl136II GAGCTC 1 cut(s) 2752
Eco105I TACGTA 1 cut(s) 1801
Eco130I CCWWGG 4 cut(s) 1298, 1516, 2020, 2463
Eco24I GRGCYC 1 cut(s) 2754
Eco32I GATATC 1 cut(s) 788
Eco47I GGWCC 2 cut(s) 470, 2594
Eco53kI GAGCTC 1 cut(s) 2752
Eco57I CTGAAG 6 cut(s) 96, 1020, 2076, 2312, 2703, 2793
EcoICRI GAGCTC 1 cut(s) 2752
EcoO109I RGGNCCY 2 cut(s) 470, 2216
EcoRI GAATTC 1 cut(s) 3015
EcoRII CCWGG 3 cut(s) 860, 1438, 1834
EcoRV GATATC 1 cut(s) 788
EcoT14I CCWWGG 4 cut(s) 1298, 1516, 2020, 2463
EcoT22I ATGCAT 1 cut(s) 1076
EcoT38I GRGCYC 1 cut(s) 2754
ErhI CCWWGG 4 cut(s) 1298, 1516, 2020, 2463
FaqI GGGAC 4 cut(s) 833, 1050, 1174, 1951
FauI CCCGC 5 cut(s) 30, 411, 503, 1754, 2460
FauNDI CATATG 1 cut(s) 2167
FbaI TGATCA 2 cut(s) 487, 2998
FblI GTMKAC 1 cut(s) 1215
FriOI GRGCYC 1 cut(s) 2754
FspBI CTAG 4 cut(s) 42, 635, 2160, 2424
GsaI CCCAGC 1 cut(s) 318
GsuI CTGGAG 2 cut(s) 1029, 3135
HaeIII GGCC 4 cut(s) 860, 1890, 2019, 2218
HapII CCGG 2 cut(s) 182, 692
HincII GTYRAC 2 cut(s) 2267, 3069
HindII GTYRAC 2 cut(s) 2267, 3069
HindIII AAGCTT 2 cut(s) 267, 2066
HpaII CCGG 2 cut(s) 182, 692
Hpy166II GTNNAC 6 cut(s) 293, 544, 1216, 2267, 3069, 3159
Hpy8I GTNNAC 6 cut(s) 293, 544, 1216, 2267, 3069, 3159
HpyCH4III ACNGT 4 cut(s) 49, 610, 619, 1232
HpyCH4IV ACGT 3 cut(s) 951, 1800, 2317
HpyF10VI GCNNNNNNNGC 3 cut(s) 857, 1746, 1896
HpySE526I ACGT 3 cut(s) 951, 1800, 2317
KpnI GGTACC 1 cut(s) 255
Ksp22I TGATCA 2 cut(s) 487, 2998
KspI CCGCGG 1 cut(s) 855
LguI GCTCTTC 1 cut(s) 870
LmnI GCTCC 3 cut(s) 370, 1826, 2757
Lsp1109I GCAGC 6 cut(s) 788, 835, 1270, 1543, 1781, 2908
MaeI CTAG 4 cut(s) 42, 635, 2160, 2424
MaeII ACGT 3 cut(s) 951, 1800, 2317
MaeIII GTNAC 4 cut(s) 685, 725, 893, 1645
MfeI CAATTG 2 cut(s) 453, 1641
MflI RGATCY 3 cut(s) 1776, 2535, 2699
MhlI GDGCHC 3 cut(s) 1589, 2754, 3161
MlyI GAGTC 4 cut(s) 26, 1499, 2366, 2489
MmeI TCCRAC 1 cut(s) 864
Mph1103I ATGCAT 1 cut(s) 1076
MroXI GAANNNNTTC 1 cut(s) 966
MslI CAYNNNNRTG 2 cut(s) 975, 1582
MspA1I CMGCKG 5 cut(s) 560, 812, 854, 2248, 3041
MspI CCGG 2 cut(s) 182, 692
MspR9I CCNGG 4 cut(s) 183, 862, 1440, 1836
MunI CAATTG 2 cut(s) 453, 1641
Mva1269I GAATGC 2 cut(s) 850, 1463
MvaI CCWGG 3 cut(s) 862, 1440, 1836
MvnI CGCG 1 cut(s) 854
MwoI GCNNNNNNNGC 3 cut(s) 857, 1746, 1896
NciI CCSGG 1 cut(s) 183
NcoI CCATGG 1 cut(s) 1298
NdeI CATATG 1 cut(s) 2167
NlaIV GGNNCC 6 cut(s) 253, 372, 708, 2052, 2217, 2447
NmuCI GTSAC 2 cut(s) 893, 1645
NsiI ATGCAT 1 cut(s) 1076
NspI RCATGY 3 cut(s) 806, 1043, 1583
NspV TTCGAA 1 cut(s) 2412
OliI CACNNNNGTG 1 cut(s) 1582
PagI TCATGA 2 cut(s) 3001, 3103
PciI ACATGT 2 cut(s) 802, 1579
PciSI GCTCTTC 1 cut(s) 870
PctI GAATGC 2 cut(s) 850, 1463
PdmI GAANNNNTTC 1 cut(s) 966
PfeI GAWTC 7 cut(s) 424, 578, 1558, 2113, 2128, 2141, 3107
PflMI CCANNNNNTGG 2 cut(s) 1376, 1445
PfoI TCCNGGA 1 cut(s) 1834
PleI GAGTC 4 cut(s) 26, 1498, 2365, 2489
PpsI GAGTC 4 cut(s) 26, 1498, 2365, 2489
Ppu21I YACGTR 2 cut(s) 1801, 2318
PpuMI RGGWCCY 1 cut(s) 470
PscI ACATGT 2 cut(s) 802, 1579
PshAI GACNNNNGTC 1 cut(s) 2168
PsiI TTATAA 1 cut(s) 2238
Psp124BI GAGCTC 1 cut(s) 2754
Psp5II RGGWCCY 1 cut(s) 470
Psp6I CCWGG 3 cut(s) 860, 1438, 1834
PspFI CCCAGC 1 cut(s) 314
PspGI CCWGG 3 cut(s) 860, 1438, 1834
PspN4I GGNNCC 6 cut(s) 253, 372, 708, 2052, 2217, 2447
PspPI GGNCC 3 cut(s) 470, 2216, 2594
PspPPI RGGWCCY 1 cut(s) 470
PstI CTGCAG 1 cut(s) 778
PstNI CAGNNNCTG 1 cut(s) 473
PsuI RGATCY 3 cut(s) 1776, 2535, 2699
PvuII CAGCTG 3 cut(s) 560, 812, 2248
RsaI GTAC 9 cut(s) 226, 240, 253, 294, 481, 607, 1269, 1522, 2479
RsaNI GTAC 9 cut(s) 225, 239, 252, 293, 480, 606, 1268, 1521, 2478
RseI CAYNNNNRTG 2 cut(s) 975, 1582
SacI GAGCTC 1 cut(s) 2754
SacII CCGCGG 1 cut(s) 855
SapI GCTCTTC 1 cut(s) 870
Sau96I GGNCC 3 cut(s) 470, 2216, 2594
SchI GAGTC 4 cut(s) 26, 1499, 2366, 2489
ScrFI CCNGG 4 cut(s) 183, 862, 1440, 1836
SduI GDGCHC 3 cut(s) 1589, 2754, 3161
SfcI CTRYAG 1 cut(s) 774
Sfr303I CCGCGG 1 cut(s) 855
SfuI TTCGAA 1 cut(s) 2412
SgrBI CCGCGG 1 cut(s) 855
SinI GGWCC 2 cut(s) 470, 2594
SmiMI CAYNNNNRTG 2 cut(s) 975, 1582
SmlI CTYRAG 4 cut(s) 1137, 1304, 1781, 2875
SmoI CTYRAG 4 cut(s) 1137, 1304, 1781, 2875
SnaBI TACGTA 1 cut(s) 1801
SpeI ACTAGT 1 cut(s) 2423
SspMI CTAG 4 cut(s) 42, 635, 2160, 2424
SstI GAGCTC 1 cut(s) 2754
StyD4I CCNGG 4 cut(s) 181, 860, 1438, 1834
StyI CCWWGG 4 cut(s) 1298, 1516, 2020, 2463
TaaI ACNGT 4 cut(s) 49, 610, 619, 1232
TaiI ACGT 3 cut(s) 954, 1803, 2320
TaqI TCGA 6 cut(s) 796, 1234, 1320, 2334, 2412, 2852
TatI WGTACW 3 cut(s) 292, 1267, 2477
TauI GCSGC 4 cut(s) 854, 1678, 2451, 3041
TfiI GAWTC 7 cut(s) 424, 578, 1558, 2113, 2128, 2141, 3107
TscAI CASTG 2 cut(s) 262, 3166
TseFI GTSAC 2 cut(s) 893, 1645
TseI GCWGC 6 cut(s) 776, 848, 1283, 1531, 1769, 2921
Tsp45I GTSAC 2 cut(s) 893, 1645
TspGWI ACGGA 3 cut(s) 1411, 2941, 3045
TspRI CASTG 2 cut(s) 262, 3166
Van91I CCANNNNNTGG 2 cut(s) 1376, 1445
VneI GTGCAC 1 cut(s) 3157
VpaK11BI GGWCC 2 cut(s) 470, 2594
XapI RAATTY 5 cut(s) 865, 1902, 2306, 2664, 3015
XceI RCATGY 3 cut(s) 806, 1043, 1583
XcmI CCANNNNNNNNNTGG 2 cut(s) 1907, 2277
XmiI GTMKAC 1 cut(s) 1215
XmnI GAANNNNTTC 1 cut(s) 966
XspI CTAG 4 cut(s) 42, 635, 2160, 2424
Zsp2I ATGCAT 1 cut(s) 1076
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.