MD03G1224800.v1.1

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
Physical Location & Seq
Forward (+)
31045176 .. 31046685
1510 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1224800.v1.1.491

Sequence Viewer

Length: 717 bp
ATGGAAGTATCAGTGGCTGTTGGTGTCGTTTTGGTGGGCATAATCGTAATTACATGGGCATGGAAGGTGGTGAACTGGTTGTGGCTGAGGCCAAAGAAGCTAGAACGATACCTGAGGCAGCAAGGCATTGCTGGAAACTCATACAGGTTTATGTCCGGAGACATGAAAGAAATCTCCATGACGACAGAACAAGCTTATTCTAAACCCATGAGCCTCTCCCATGACATAGCCCCACGAGTCATCCCCTTCCATCACCGATTAGTAAACACTTACGGTAAGAATTCTTTTGTTTGGATGGGCACCATCCCAAGGGTGATCATCACTAATCCAGAAGATTTGAAATACATCTTAACAAAAATGGGGGAGTTTCCGCAGCCAGAACCAAACCCACTTGTCAAGTTACTAGCAACAGGTATTGCACTCTATGAAGGTGAGAAATGGGCAAAACACCGAAGAATTATCAACCCAGTATTCCATTTAGAGAAGCTAAAGCGAATGTTACCGGCATTTTACGAAAGTTGTAGTGAGATGATTGTGGAATGGGAGAGCTTGGAGTTGAAAGAGAGTTCATGTGAGTTGGATGTTTGGCCTTATTTTCAAAATTTGACGGCCGATGTGATTTCTCGAACAGCATTCGGAAGTAGCTATAAAGAAGGAAGAAAAATATTTCAACTTTTGAAAGAGCAAGGACTGTTAGTTTATAAGTGTATTTGCTGA

Protein Analysis

239

Amino Acids

27.59

Weight (kDa)

9.06

Isoelectric Point (pI)

32.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 84 - 221 2.7e-17 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000133)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G14610 AT3G14620 AT3G14630 AT3G14630 AT3G14640 AT3G14640 AT3G14650 AT3G14660 AT3G14660 AT3G14660 AT3G14680 AT3G14690 AT3G14690
fragaria_vesca FvH4_1g08410 FvH4_2g31040 FvH4_3g17200 FvH4_3g17200 FvH4_3g17220 FvH4_3g17220 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17260 FvH4_3g17260 FvH4_3g17263 FvH4_3g17264 FvH4_3g17265 FvH4_3g17266 FvH4_5g18530 FvH4_5g19690 FvH4_7g03990 FvH4_7g03990 FvH4_7g03990 FvH4_7g03990 FvH4_7g03990 FvH4_7g17900 FvH4_7g17900
malus_domestica MD02G1088200.v1.1 MD03G1224800.v1.1 MD03G1224900.v1.1 MD03G1225000.v1.1 MD11G1274100.v1.1 MD11G1274200.v1.1 MD11G1274300.v1.1 MD11G1274500.v1.1 MD11G1274600.v1.1 MD15G1050400.v1.1 MD15G1050500.v1.1 MD15G1050600.v1.1 MD15G1050700.v1.1
prunus_persica Prupe.1G404900_v2.0.a1 Prupe.1G404900_v2.0.a1 Prupe.4G152600_v2.0.a1 Prupe.4G152700_v2.0.a1 Prupe.4G152800_v2.0.a1 Prupe.4G152900_v2.0.a1 Prupe.4G153000_v2.0.a1 Prupe.7G201400_v2.0.a1 Prupe.7G201400_v2.0.a1
pyrus_communis pycom03g17310 pycom03g17330 pycom11g21520 pycom11g21600 pycom11g24180 pycom11g24190 pycom11g24200 pycom11g24210 pycom15g04890
rosa_chinensis RchiOBHm_Chr1g0327671 RchiOBHm_Chr1g0327711 RchiOBHm_Chr1g0327721 RchiOBHm_Chr2g0094501 RchiOBHm_Chr5g0028601 RchiOBHm_Chr5g0028611 RchiOBHm_Chr5g0028621 RchiOBHm_Chr5g0028661 RchiOBHm_Chr5g0028671 RchiOBHm_Chr5g0028701 RchiOBHm_Chr5g0028721 RchiOBHm_Chr5g0028741 RchiOBHm_Chr5g0028751 RchiOBHm_Chr5g0028771 RchiOBHm_Chr5g0028821 RchiOBHm_Chr6g0311761 RchiOBHm_Chr7g0204421
rosa_laevigata RLG00000003223 RLG00000003462 RLG00000010376 RLG00000012452 RLG00000016496 RLG00000018531 RLG00000018532 RLG00000018536 RLG00000029973 RLG00000029976 RLG00000033105 RLG00000033106 RLG00000033107 RLG00000033109 RLG00000033110 RLG00000033111 RLG00000033112 RLG00000033113 RLG00000033114 RLG00000033116 RLG00000033124
rosa_multiflora Rmu_co8029584.1_g000001 Rmu_co8159878.1_g000001 Rmu_co8310611.1_g000001 Rmu_sc0001000.1_g000004 Rmu_sc0001000.1_g000016 Rmu_sc0001575.1_g000020 Rmu_sc0001575.1_g000021 Rmu_sc0001575.1_g000022 Rmu_sc0001575.1_g000027 Rmu_sc0001575.1_g000035 Rmu_sc0001575.1_g000040 Rmu_sc0002888.1_g000039 Rmu_sc0003951.1_g000001 Rmu_sc0004359.1_g000045 Rmu_sc0005178.1_g000001 Rmu_sc0005178.1_g000002 Rmu_sc0005178.1_g000004 Rmu_sc0023855.1_g000001 Rmu_sc0024393.1_g000001 Rmu_sc0035326.1_g000001
rosa_roxburghii Rroxscaffold_1G00051080 Rroxscaffold_1G00051100 Rroxscaffold_1G00051110 Rroxscaffold_1G00051120 Rroxscaffold_1G00051150 Rroxscaffold_1G00051160 Rroxscaffold_1G00051170 Rroxscaffold_1G00051180 Rroxscaffold_2G00123610 Rroxscaffold_2G00147120 Rroxscaffold_3G00250540 Rroxscaffold_3G00253110 Rroxscaffold_3G00253120 Rroxscaffold_4G00322410 Rroxscaffold_4G00322440 Rroxscaffold_4G00322470 Rroxscaffold_7G00157330
rosa_rugosa Rorug01G0069500 Rorug01G0069600 Rorug01G0069700 Rorug02G0044200 Rorug02G0227700 Rorug05G0109800 Rorug05G0109900 Rorug05G0110000 Rorug05G0110100 Rorug05G0110300 Rorug05G0110400 Rorug05G0110500 Rorug07G0083800 Rorug07G0083900.1 Rorug07G0103700
rosa_samantha Rh1BG069000 Rh1BG069100 Rh1BG069200 Rh1CG084000 Rh1DG090700 Rh1DG090800 Rh1DG090900 Rh2AG092500 Rh2DG091600 Rh2DG309400 Rh5AG202100 Rh5AG202200 Rh5AG202500 Rh5AG202800 Rh5AG202900 Rh5CG220600 Rh5CG220700 Rh5CG220800 Rh5CG220900 Rh5CG221600 Rh5CG221900 Rh5CG222000 Rh5CG222100 Rh5DG203300 Rh5DG203400 Rh5DG203500 Rh5DG204100 Rh5DG204300 Rh5DG204400 Rh5DG204600 Rh6BG517600 Rh6CG523400 Rh6DG509100 Rh7AG213600 Rh7BG211400 Rh7DG220800
rosa_wichuraiana Rw0G010630 Rw1G006750 Rw1G006770 Rw5G018300 Rw5G018310 Rw5G018330 Rw6G044090 Rw7G018510 Rw7G020290

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 702
AccB1I GGYRCC 1 cut(s) 299
AccIII TCCGGA 1 cut(s) 155
AciI CCGC 1 cut(s) 371
AcoI YGGCCR 1 cut(s) 609
AcsI RAATTY 2 cut(s) 280, 601
AfiI CCNNNNNNNGG 1 cut(s) 309
AgsI TTSAA 5 cut(s) 340, 559, 599, 671, 679
AluBI AGCT 5 cut(s) 100, 194, 487, 549, 645
AluI AGCT 5 cut(s) 100, 194, 487, 549, 645
Alw26I GTCTC 1 cut(s) 153
AlwNI CAGNNNCTG 1 cut(s) 17
Aor13HI TCCGGA 1 cut(s) 155
AoxI GGCC 3 cut(s) 89, 587, 609
ApeKI GCWGC 2 cut(s) 118, 373
ApoI RAATTY 2 cut(s) 280, 601
AsuHPI GGTGA 4 cut(s) 82, 245, 325, 443
AxyI CCTNAGG 1 cut(s) 113
BaeGI GKGCMC 1 cut(s) 302
BanI GGYRCC 1 cut(s) 299
BauI CACGAG 1 cut(s) 234
BbvCI CCTCAGC 1 cut(s) 86
BbvI GCAGC 2 cut(s) 130, 385
BccI CCATC 3 cut(s) 258, 289, 311
BceAI ACGGC 1 cut(s) 624
BclI TGATCA 1 cut(s) 315
BcoDI GTCTC 1 cut(s) 153
BfaI CTAG 2 cut(s) 101, 404
BisI GCNGC 2 cut(s) 119, 374
BlsI GCNGC 2 cut(s) 120, 375
BmiI GGNNCC 1 cut(s) 301
BmrI ACTGGG 1 cut(s) 461
BmuI ACTGGG 1 cut(s) 461
Bpu10I CCTNAGC 1 cut(s) 86
BsaJI CCNNGG 1 cut(s) 308
BsaWI WCCGGW 1 cut(s) 155
Bsc4I CCNNNNNNNGG 1 cut(s) 309
Bse118I RCCGGY 1 cut(s) 502
Bse1I ACTGG 2 cut(s) 80, 467
Bse21I CCTNAGG 1 cut(s) 113
Bse3DI GCAATG 1 cut(s) 126
BseAI TCCGGA 1 cut(s) 155
BseDI CCNNGG 1 cut(s) 308
BseGI GGATG 4 cut(s) 240, 300, 303, 586
BseLI CCNNNNNNNGG 1 cut(s) 309
BseMI GCAATG 1 cut(s) 126
BseMII CTCAG 2 cut(s) 77, 104
BseNI ACTGG 2 cut(s) 80, 467
BseSI GKGCMC 1 cut(s) 302
BseX3I CGGCCG 1 cut(s) 609
BseXI GCAGC 2 cut(s) 130, 385
Bsh1285I CGRYCG 1 cut(s) 612
BshFI GGCC 3 cut(s) 91, 589, 611
BshNI GGYRCC 1 cut(s) 299
BsiEI CGRYCG 1 cut(s) 612
BsiSI CCGG 2 cut(s) 156, 503
BslI CCNNNNNNNGG 1 cut(s) 309
BsmAI GTCTC 1 cut(s) 153
BsmI GAATGC 1 cut(s) 632
BsnI GGCC 3 cut(s) 91, 589, 611
Bsp1286I GDGCHC 1 cut(s) 302
Bsp13I TCCGGA 1 cut(s) 155
Bsp143I GATC 1 cut(s) 315
BspACI CCGC 1 cut(s) 371
BspANI GGCC 3 cut(s) 91, 589, 611
BspCNI CTCAG 2 cut(s) 78, 105
BspEI TCCGGA 1 cut(s) 155
BspLI GGNNCC 1 cut(s) 301
BspT107I GGYRCC 1 cut(s) 299
BsrDI GCAATG 1 cut(s) 126
BsrFI RCCGGY 1 cut(s) 502
BsrI ACTGG 2 cut(s) 80, 467
BssAI RCCGGY 1 cut(s) 502
BssECI CCNNGG 1 cut(s) 308
BssMI GATC 1 cut(s) 315
BssSI CACGAG 1 cut(s) 234
BssT1I CCWWGG 1 cut(s) 308
Bst2BI CACGAG 1 cut(s) 234
Bst4CI ACNGT 2 cut(s) 275, 693
BstDEI CTNAG 2 cut(s) 86, 113
BstF5I GGATG 4 cut(s) 240, 300, 303, 586
BstKTI GATC 1 cut(s) 318
BstMAI GTCTC 1 cut(s) 153
BstMBI GATC 1 cut(s) 315
BstMCI CGRYCG 1 cut(s) 612
BstMWI GCNNNNNNNGC 1 cut(s) 97
BstSLI GKGCMC 1 cut(s) 302
BstV1I GCAGC 2 cut(s) 130, 385
BstZI CGGCCG 1 cut(s) 609
Bsu36I CCTNAGG 1 cut(s) 113
BsuRI GGCC 3 cut(s) 91, 589, 611
BtsCI GGATG 4 cut(s) 240, 300, 303, 586
BtsIMutI CAGTG 1 cut(s) 18
CaiI CAGNNNCTG 1 cut(s) 17
Cfr10I RCCGGY 1 cut(s) 502
CviAII CATG 7 cut(s) 54, 60, 163, 178, 208, 221, 570
DdeI CTNAG 2 cut(s) 86, 113
DpnI GATC 1 cut(s) 317
DpnII GATC 1 cut(s) 315
EaeI YGGCCR 1 cut(s) 609
EagI CGGCCG 1 cut(s) 609
EclXI CGGCCG 1 cut(s) 609
Eco130I CCWWGG 1 cut(s) 308
Eco52I CGGCCG 1 cut(s) 609
Eco81I CCTNAGG 1 cut(s) 113
EcoRI GAATTC 1 cut(s) 280
EcoT14I CCWWGG 1 cut(s) 308
ErhI CCWWGG 1 cut(s) 308
FaeI CATG 7 cut(s) 57, 63, 166, 181, 211, 224, 573
FatI CATG 7 cut(s) 53, 59, 162, 177, 207, 220, 569
FbaI TGATCA 1 cut(s) 315
Fnu4HI GCNGC 2 cut(s) 119, 374
FokI GGATG 4 cut(s) 227, 290, 307, 593
Fsp4HI GCNGC 2 cut(s) 119, 374
FspBI CTAG 2 cut(s) 101, 404
GluI GCNGC 2 cut(s) 119, 374
HaeIII GGCC 3 cut(s) 91, 589, 611
HapII CCGG 2 cut(s) 156, 503
Hin1II CATG 7 cut(s) 57, 63, 166, 181, 211, 224, 573
HindIII AAGCTT 1 cut(s) 192
HinfI GANTC 1 cut(s) 237
HpaII CCGG 2 cut(s) 156, 503
HphI GGTGA 4 cut(s) 82, 245, 325, 443
Hpy166II GTNNAC 2 cut(s) 73, 265
Hpy188I TCNGA 1 cut(s) 638
Hpy188III TCNNGA 3 cut(s) 156, 329, 624
Hpy8I GTNNAC 2 cut(s) 73, 265
HpyAV CCTTC 4 cut(s) 58, 256, 422, 647
HpyCH4III ACNGT 2 cut(s) 275, 693
HpyCH4V TGCA 1 cut(s) 419
HpyF10VI GCNNNNNNNGC 1 cut(s) 97
HpyF3I CTNAG 2 cut(s) 86, 113
Hsp92II CATG 7 cut(s) 57, 63, 166, 181, 211, 224, 573
Kpn2I TCCGGA 1 cut(s) 155
Ksp22I TGATCA 1 cut(s) 315
Kzo9I GATC 1 cut(s) 315
Lsp1109I GCAGC 2 cut(s) 130, 385
MaeI CTAG 2 cut(s) 101, 404
MaeIII GTNAC 2 cut(s) 399, 498
MalI GATC 1 cut(s) 317
MboI GATC 1 cut(s) 315
MboII GAAGA 3 cut(s) 344, 465, 669
MhlI GDGCHC 1 cut(s) 302
MluCI AATT 4 cut(s) 48, 280, 456, 601
MlyI GAGTC 1 cut(s) 246
MmeI TCCRAC 1 cut(s) 558
MnlI CCTC 3 cut(s) 81, 108, 224
MroI TCCGGA 1 cut(s) 155
MseI TTAA 1 cut(s) 350
MslI CAYNNNNRTG 1 cut(s) 58
MspI CCGG 2 cut(s) 156, 503
Mva1269I GAATGC 1 cut(s) 632
MwoI GCNNNNNNNGC 1 cut(s) 97
NdeII GATC 1 cut(s) 315
NlaIII CATG 7 cut(s) 57, 63, 166, 181, 211, 224, 573
NlaIV GGNNCC 1 cut(s) 301
PctI GAATGC 1 cut(s) 632
PkrI GCNGC 2 cut(s) 120, 375
PleI GAGTC 1 cut(s) 245
PpsI GAGTC 1 cut(s) 245
PsiI TTATAA 1 cut(s) 702
PspN4I GGNNCC 1 cut(s) 301
PstNI CAGNNNCTG 1 cut(s) 17
RseI CAYNNNNRTG 1 cut(s) 58
SaqAI TTAA 1 cut(s) 350
SatI GCNGC 2 cut(s) 119, 374
Sau3AI GATC 1 cut(s) 315
SchI GAGTC 1 cut(s) 246
SduI GDGCHC 1 cut(s) 302
SmiMI CAYNNNNRTG 1 cut(s) 58
Sse9I AATT 4 cut(s) 48, 280, 456, 601
SsiI CCGC 1 cut(s) 371
SspI AATATT 1 cut(s) 666
SspMI CTAG 2 cut(s) 101, 404
StyI CCWWGG 1 cut(s) 308
TaaI ACNGT 2 cut(s) 275, 693
TaqI TCGA 1 cut(s) 625
TasI AATT 4 cut(s) 48, 280, 456, 601
Tru1I TTAA 1 cut(s) 350
Tru9I TTAA 1 cut(s) 350
TscAI CASTG 1 cut(s) 18
TseI GCWGC 2 cut(s) 118, 373
TspDTI ATGAA 3 cut(s) 179, 441, 558
TspRI CASTG 1 cut(s) 18
XapI RAATTY 2 cut(s) 280, 601
XspI CTAG 2 cut(s) 101, 404
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.