Rmu_sc0001000.1_g000016

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001000.1
Physical Location & Seq
Forward (+)
47847 .. 51474
3628 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001000.1_g000016.1.cds

Sequence Viewer

Length: 1167 bp
atgcaaatggaagtgtcattaggcagcatagcagtatccgttgttttgttgattatagcttcatcatgggcatggagggtgctgaattgggtgtggttgaagccaaagaagctagaaaactgtctgaggcagcaaggtcttgccggaaactcataccgccttttgattggcgatcttaaggagaacatcaaggtgaggaaggaagccacttcaaaacccatgaacctctccgatgatgtagccccgcgtgtcctgccatttctccatcaaaccattaacaaacatggtacttgccatttcttcacttgttacttccttgcatatactacaatagtaagcaatgaaactgggtttctaccaacaaagttgaataggaggatgaaggcaattagcaaagaaatagaagcaacattgaagcatattattagtaaaaaagaggaggcaatgaaaactggtgatgaagcctctaagaatgacttattagggatacttctggaatccaattggaaagaaattcgacagtatggggggaacaagaatgttggaatgagcattgaagaggtgattggagaatgtaagctgttttactttgccggggcagagactacctcaatcttgcttacttggactatgattctactctgtagatatccaaattggcaggctcgtgccagagaagaggtttttcaagtatttggcaacaagaaaccagattttgatgggctcgttcacctaaaagttgtcaccatgattttatatgaggttctgaggttatacccaccagtacctgtgatgactcgaactgttcagaaggaaacacagctcggaaatttgttactcccagctggagtgcagttgtcattaccaatattcctggttcagcaagacgaacaactgtggggtgaggatgcaaaggaattcaacccagagagattttcagaaggaatttcaaaggcaacaaagggtcaggtttcatttatcccattcggatggggtcctcggatatgcattggacaaaactttggtttgatggaagcaaaaatggcgttgtccttgatattacgtagcttcacatttgagctttccccatcctatactcatggtccaatcacggctataacgattcgaccacaatatggtgcacacattatcttgcaaaaactgtaa

Protein Analysis

388

Amino Acids

43.98

Weight (kDa)

9.13

Isoelectric Point (pI)

36.4

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000133)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G14610 AT3G14620 AT3G14630 AT3G14630 AT3G14640 AT3G14640 AT3G14650 AT3G14660 AT3G14660 AT3G14660 AT3G14680 AT3G14690 AT3G14690
fragaria_vesca FvH4_1g08410 FvH4_2g31040 FvH4_3g17200 FvH4_3g17200 FvH4_3g17220 FvH4_3g17220 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17260 FvH4_3g17260 FvH4_3g17263 FvH4_3g17264 FvH4_3g17265 FvH4_3g17266 FvH4_5g18530 FvH4_5g19690 FvH4_7g03990 FvH4_7g03990 FvH4_7g03990 FvH4_7g03990 FvH4_7g03990 FvH4_7g17900 FvH4_7g17900
malus_domestica MD02G1088200.v1.1 MD03G1224800.v1.1 MD03G1224900.v1.1 MD03G1225000.v1.1 MD11G1274100.v1.1 MD11G1274200.v1.1 MD11G1274300.v1.1 MD11G1274500.v1.1 MD11G1274600.v1.1 MD15G1050400.v1.1 MD15G1050500.v1.1 MD15G1050600.v1.1 MD15G1050700.v1.1
prunus_persica Prupe.1G404900_v2.0.a1 Prupe.1G404900_v2.0.a1 Prupe.4G152600_v2.0.a1 Prupe.4G152700_v2.0.a1 Prupe.4G152800_v2.0.a1 Prupe.4G152900_v2.0.a1 Prupe.4G153000_v2.0.a1 Prupe.7G201400_v2.0.a1 Prupe.7G201400_v2.0.a1
pyrus_communis pycom03g17310 pycom03g17330 pycom11g21520 pycom11g21600 pycom11g24180 pycom11g24190 pycom11g24200 pycom11g24210 pycom15g04890
rosa_chinensis RchiOBHm_Chr1g0327671 RchiOBHm_Chr1g0327711 RchiOBHm_Chr1g0327721 RchiOBHm_Chr2g0094501 RchiOBHm_Chr5g0028601 RchiOBHm_Chr5g0028611 RchiOBHm_Chr5g0028621 RchiOBHm_Chr5g0028661 RchiOBHm_Chr5g0028671 RchiOBHm_Chr5g0028701 RchiOBHm_Chr5g0028721 RchiOBHm_Chr5g0028741 RchiOBHm_Chr5g0028751 RchiOBHm_Chr5g0028771 RchiOBHm_Chr5g0028821 RchiOBHm_Chr6g0311761 RchiOBHm_Chr7g0204421
rosa_laevigata RLG00000003223 RLG00000003462 RLG00000010376 RLG00000012452 RLG00000016496 RLG00000018531 RLG00000018532 RLG00000018536 RLG00000029973 RLG00000029976 RLG00000033105 RLG00000033106 RLG00000033107 RLG00000033109 RLG00000033110 RLG00000033111 RLG00000033112 RLG00000033113 RLG00000033114 RLG00000033116 RLG00000033124
rosa_multiflora Rmu_co8029584.1_g000001 Rmu_co8159878.1_g000001 Rmu_co8310611.1_g000001 Rmu_sc0001000.1_g000004 Rmu_sc0001000.1_g000016 Rmu_sc0001575.1_g000020 Rmu_sc0001575.1_g000021 Rmu_sc0001575.1_g000022 Rmu_sc0001575.1_g000027 Rmu_sc0001575.1_g000035 Rmu_sc0001575.1_g000040 Rmu_sc0002888.1_g000039 Rmu_sc0003951.1_g000001 Rmu_sc0004359.1_g000045 Rmu_sc0005178.1_g000001 Rmu_sc0005178.1_g000002 Rmu_sc0005178.1_g000004 Rmu_sc0023855.1_g000001 Rmu_sc0024393.1_g000001 Rmu_sc0035326.1_g000001
rosa_roxburghii Rroxscaffold_1G00051080 Rroxscaffold_1G00051100 Rroxscaffold_1G00051110 Rroxscaffold_1G00051120 Rroxscaffold_1G00051150 Rroxscaffold_1G00051160 Rroxscaffold_1G00051170 Rroxscaffold_1G00051180 Rroxscaffold_2G00123610 Rroxscaffold_2G00147120 Rroxscaffold_3G00250540 Rroxscaffold_3G00253110 Rroxscaffold_3G00253120 Rroxscaffold_4G00322410 Rroxscaffold_4G00322440 Rroxscaffold_4G00322470 Rroxscaffold_7G00157330
rosa_rugosa Rorug01G0069500 Rorug01G0069600 Rorug01G0069700 Rorug02G0044200 Rorug02G0227700 Rorug05G0109800 Rorug05G0109900 Rorug05G0110000 Rorug05G0110100 Rorug05G0110300 Rorug05G0110400 Rorug05G0110500 Rorug07G0083800 Rorug07G0083900.1 Rorug07G0103700
rosa_samantha Rh1BG069000 Rh1BG069100 Rh1BG069200 Rh1CG084000 Rh1DG090700 Rh1DG090800 Rh1DG090900 Rh2AG092500 Rh2DG091600 Rh2DG309400 Rh5AG202100 Rh5AG202200 Rh5AG202500 Rh5AG202800 Rh5AG202900 Rh5CG220600 Rh5CG220700 Rh5CG220800 Rh5CG220900 Rh5CG221600 Rh5CG221900 Rh5CG222000 Rh5CG222100 Rh5DG203300 Rh5DG203400 Rh5DG203500 Rh5DG204100 Rh5DG204300 Rh5DG204400 Rh5DG204600 Rh6BG517600 Rh6CG523400 Rh6DG509100 Rh7AG213600 Rh7BG211400 Rh7DG220800
rosa_wichuraiana Rw0G010630 Rw1G006750 Rw1G006770 Rw5G018300 Rw5G018310 Rw5G018330 Rw6G044090 Rw7G018510 Rw7G020290

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1136
AccII CGCG 1 cut(s) 247
AciI CCGC 2 cut(s) 157, 245
AcsI RAATTY 4 cut(s) 513, 829, 917, 945
AfaI GTAC 2 cut(s) 289, 786
AfiI CCNNNNNNNGG 1 cut(s) 1136
AflII CTTAAG 1 cut(s) 176
AgsI TTSAA 8 cut(s) 100, 213, 370, 415, 557, 689, 922, 951
AjnI CCWGG 1 cut(s) 873
AjuI GAANNNNNNNTTGG 2 cut(s) 549, 581
AluBI AGCT 7 cut(s) 59, 112, 580, 823, 845, 1068, 1081
AluI AGCT 7 cut(s) 59, 112, 580, 823, 845, 1068, 1081
Alw21I GWGCWC 1 cut(s) 1144
Alw26I GTCTC 1 cut(s) 596
Alw44I GTGCAC 1 cut(s) 1140
AlwNI CAGNNNCTG 1 cut(s) 788
ApaLI GTGCAC 1 cut(s) 1140
ApeKI GCWGC 2 cut(s) 24, 130
ApoI RAATTY 4 cut(s) 513, 829, 917, 945
AspS9I GGNCC 2 cut(s) 995, 1103
AsuC2I CCSGG 1 cut(s) 595
AsuHPI GGTGA 6 cut(s) 205, 467, 574, 722, 736, 914
AvaII GGWCC 2 cut(s) 995, 1103
BaeGI GKGCMC 1 cut(s) 1144
BanII GRGCYC 1 cut(s) 726
BauI CACGAG 1 cut(s) 666
Bbv12I GWGCWC 1 cut(s) 1144
BbvI GCAGC 2 cut(s) 36, 142
BccI CCATC 5 cut(s) 273, 713, 984, 1024, 1096
BceAI ACGGC 1 cut(s) 1128
BciT130I CCWGG 1 cut(s) 875
BciVI GTATCC 2 cut(s) 46, 480
BcnI CCSGG 1 cut(s) 595
BcoDI GTCTC 1 cut(s) 596
BfaI CTAG 1 cut(s) 113
BfmI CTRYAG 1 cut(s) 643
BfrI CTTAAG 1 cut(s) 176
BfuI GTATCC 2 cut(s) 46, 480
BisI GCNGC 2 cut(s) 25, 131
BlsI GCNGC 2 cut(s) 26, 132
Bme1390I CCNGG 2 cut(s) 595, 875
Bme18I GGWCC 2 cut(s) 995, 1103
BmgT120I GGNCC 2 cut(s) 995, 1103
BmiI GGNNCC 1 cut(s) 996
BmrFI CCNGG 2 cut(s) 595, 875
BmrI ACTGGG 1 cut(s) 357
BmsI GCATC 1 cut(s) 898
BmuI ACTGGG 1 cut(s) 357
BplI GAGNNNNNCTC 2 cut(s) 593, 625
BpmI CTGGAG 1 cut(s) 867
BpuMI CCSGG 1 cut(s) 595
BsaAI YACGTR 1 cut(s) 1064
BsaJI CCNNGG 2 cut(s) 594, 998
Bsc4I CCNNNNNNNGG 1 cut(s) 1136
Bse1I ACTGG 3 cut(s) 352, 457, 782
Bse3DI GCAATG 2 cut(s) 346, 450
BseBI CCWGG 1 cut(s) 875
BseDI CCNNGG 2 cut(s) 594, 998
BseGI GGATG 4 cut(s) 384, 913, 995, 1088
BseLI CCNNNNNNNGG 1 cut(s) 1136
BseMI GCAATG 2 cut(s) 346, 450
BseMII CTCAG 2 cut(s) 116, 758
BseNI ACTGG 3 cut(s) 352, 457, 782
BseRI GAGGAG 1 cut(s) 452
BseSI GKGCMC 1 cut(s) 1144
BseXI GCAGC 2 cut(s) 36, 142
BseYI CCCAGC 1 cut(s) 841
BsgI GTGCAG 1 cut(s) 872
Bsh1236I CGCG 1 cut(s) 247
BsiHKAI GWGCWC 1 cut(s) 1144
BsiSI CCGG 2 cut(s) 144, 594
BslI CCNNNNNNNGG 1 cut(s) 1136
BsmAI GTCTC 1 cut(s) 596
Bsp1286I GDGCHC 2 cut(s) 726, 1144
Bsp143I GATC 1 cut(s) 172
BspACI CCGC 2 cut(s) 157, 245
BspCNI CTCAG 2 cut(s) 117, 759
BspFNI CGCG 1 cut(s) 247
BspLI GGNNCC 1 cut(s) 996
BspTI CTTAAG 1 cut(s) 176
BsrDI GCAATG 2 cut(s) 346, 450
BsrI ACTGG 3 cut(s) 352, 457, 782
BssECI CCNNGG 2 cut(s) 594, 998
BssMI GATC 1 cut(s) 172
BssSI CACGAG 1 cut(s) 666
Bst2BI CACGAG 1 cut(s) 666
Bst2UI CCWGG 1 cut(s) 875
Bst4CI ACNGT 5 cut(s) 122, 522, 805, 897, 1164
Bst6I CTCTTC 2 cut(s) 552, 672
BstAFI CTTAAG 1 cut(s) 176
BstBAI YACGTR 1 cut(s) 1064
BstC8I GCNNGC 1 cut(s) 663
BstDEI CTNAG 3 cut(s) 125, 468, 767
BstF5I GGATG 4 cut(s) 384, 913, 995, 1088
BstFNI CGCG 1 cut(s) 247
BstKTI GATC 1 cut(s) 175
BstMAI GTCTC 1 cut(s) 596
BstMBI GATC 1 cut(s) 172
BstMWI GCNNNNNNNGC 3 cut(s) 109, 253, 1043
BstNI CCWGG 1 cut(s) 875
BstSCI CCNGG 2 cut(s) 593, 873
BstSFI CTRYAG 1 cut(s) 643
BstSLI GKGCMC 1 cut(s) 1144
BstSNI TACGTA 1 cut(s) 1064
BstUI CGCG 1 cut(s) 247
BstV1I GCAGC 2 cut(s) 36, 142
BstXI CCANNNNNNTGG 1 cut(s) 990
BsuI GTATCC 2 cut(s) 46, 480
BtsCI GGATG 4 cut(s) 384, 913, 995, 1088
Cac8I GCNNGC 1 cut(s) 663
CaiI CAGNNNCTG 1 cut(s) 788
Cfr13I GGNCC 2 cut(s) 995, 1103
Csp6I GTAC 2 cut(s) 288, 785
CviAII CATG 6 cut(s) 66, 72, 220, 284, 748, 1100
CviQI GTAC 2 cut(s) 288, 785
DdeI CTNAG 3 cut(s) 125, 468, 767
DpnI GATC 1 cut(s) 174
DpnII GATC 1 cut(s) 172
Eam1104I CTCTTC 2 cut(s) 552, 672
EarI CTCTTC 2 cut(s) 552, 672
Eco105I TACGTA 1 cut(s) 1064
Eco24I GRGCYC 1 cut(s) 726
Eco32I GATATC 1 cut(s) 650
Eco47I GGWCC 2 cut(s) 995, 1103
EcoO109I RGGNCCY 1 cut(s) 995
EcoRI GAATTC 1 cut(s) 917
EcoRII CCWGG 1 cut(s) 873
EcoRV GATATC 1 cut(s) 650
EcoT22I ATGCAT 1 cut(s) 1010
EcoT38I GRGCYC 1 cut(s) 726
FaeI CATG 6 cut(s) 69, 75, 223, 287, 751, 1103
FalI AAGNNNNNCTT 2 cut(s) 461, 493
FatI CATG 6 cut(s) 65, 71, 219, 283, 747, 1099
FauI CCCGC 1 cut(s) 252
Fnu4HI GCNGC 2 cut(s) 25, 131
FokI GGATG 4 cut(s) 391, 920, 1002, 1075
FriOI GRGCYC 1 cut(s) 726
Fsp4HI GCNGC 2 cut(s) 25, 131
FspBI CTAG 1 cut(s) 113
GluI GCNGC 2 cut(s) 25, 131
GsaI CCCAGC 1 cut(s) 845
GsuI CTGGAG 1 cut(s) 867
HapII CCGG 2 cut(s) 144, 594
Hin1II CATG 6 cut(s) 69, 75, 223, 287, 751, 1103
HinfI GANTC 4 cut(s) 497, 634, 796, 1123
HpaII CCGG 2 cut(s) 144, 594
HphI GGTGA 6 cut(s) 205, 467, 574, 722, 736, 914
Hpy166II GTNNAC 2 cut(s) 730, 1142
Hpy188I TCNGA 8 cut(s) 126, 232, 768, 810, 827, 940, 989, 1002
Hpy188III TCNNGA 1 cut(s) 494
Hpy8I GTNNAC 2 cut(s) 730, 1142
HpyAV CCTTC 4 cut(s) 193, 376, 805, 935
HpyCH4III ACNGT 5 cut(s) 122, 522, 805, 897, 1164
HpyCH4IV ACGT 1 cut(s) 1063
HpyCH4V TGCA 7 cut(s) 4, 320, 853, 911, 1008, 1142, 1156
HpyF10VI GCNNNNNNNGC 3 cut(s) 109, 253, 1043
HpyF3I CTNAG 3 cut(s) 125, 468, 767
HpySE526I ACGT 1 cut(s) 1063
Hsp92II CATG 6 cut(s) 69, 75, 223, 287, 751, 1103
Kzo9I GATC 1 cut(s) 172
Lsp1109I GCAGC 2 cut(s) 36, 142
LweI GCATC 1 cut(s) 898
MaeI CTAG 1 cut(s) 113
MaeII ACGT 1 cut(s) 1063
MaeIII GTNAC 3 cut(s) 308, 742, 834
MalI GATC 1 cut(s) 174
MboI GATC 1 cut(s) 172
MboII GAAGA 3 cut(s) 292, 569, 689
MfeI CAATTG 1 cut(s) 502
MhlI GDGCHC 2 cut(s) 726, 1144
MluCI AATT 8 cut(s) 85, 387, 502, 513, 655, 829, 917, 945
MlyI GAGTC 1 cut(s) 790
MmeI TCCRAC 1 cut(s) 523
Mph1103I ATGCAT 1 cut(s) 1010
MseI TTAA 2 cut(s) 177, 276
MslI CAYNNNNRTG 3 cut(s) 70, 191, 988
MspA1I CMGCKG 1 cut(s) 845
MspCI CTTAAG 1 cut(s) 176
MspI CCGG 2 cut(s) 144, 594
MspR9I CCNGG 2 cut(s) 595, 875
MunI CAATTG 1 cut(s) 502
MvaI CCWGG 1 cut(s) 875
MvnI CGCG 1 cut(s) 247
MwoI GCNNNNNNNGC 3 cut(s) 109, 253, 1043
NciI CCSGG 1 cut(s) 595
NdeII GATC 1 cut(s) 172
NlaIII CATG 6 cut(s) 69, 75, 223, 287, 751, 1103
NlaIV GGNNCC 1 cut(s) 996
NmuCI GTSAC 1 cut(s) 742
NsiI ATGCAT 1 cut(s) 1010
PcsI WCGNNNNNNNCGW 1 cut(s) 1118
PfeI GAWTC 3 cut(s) 497, 634, 1123
PflMI CCANNNNNTGG 1 cut(s) 1136
PkrI GCNGC 2 cut(s) 26, 132
PleI GAGTC 1 cut(s) 790
PpsI GAGTC 1 cut(s) 790
Ppu21I YACGTR 1 cut(s) 1064
PpuMI RGGWCCY 1 cut(s) 995
Psp5II RGGWCCY 1 cut(s) 995
Psp6I CCWGG 1 cut(s) 873
PspFI CCCAGC 1 cut(s) 841
PspGI CCWGG 1 cut(s) 873
PspN4I GGNNCC 1 cut(s) 996
PspPI GGNCC 2 cut(s) 995, 1103
PspPPI RGGWCCY 1 cut(s) 995
PstNI CAGNNNCTG 1 cut(s) 788
PvuII CAGCTG 1 cut(s) 845
RsaI GTAC 2 cut(s) 289, 786
RsaNI GTAC 2 cut(s) 288, 785
RseI CAYNNNNRTG 3 cut(s) 70, 191, 988
SaqAI TTAA 2 cut(s) 177, 276
SatI GCNGC 2 cut(s) 25, 131
Sau3AI GATC 1 cut(s) 172
Sau96I GGNCC 2 cut(s) 995, 1103
SchI GAGTC 1 cut(s) 790
ScrFI CCNGG 2 cut(s) 595, 875
SduI GDGCHC 2 cut(s) 726, 1144
SfaNI GCATC 1 cut(s) 898
SfcI CTRYAG 1 cut(s) 643
SinI GGWCC 2 cut(s) 995, 1103
SmiMI CAYNNNNRTG 3 cut(s) 70, 191, 988
SmlI CTYRAG 1 cut(s) 176
SmoI CTYRAG 1 cut(s) 176
SnaBI TACGTA 1 cut(s) 1064
Sse9I AATT 8 cut(s) 85, 387, 502, 513, 655, 829, 917, 945
SsiI CCGC 2 cut(s) 157, 245
SspI AATATT 1 cut(s) 870
SspMI CTAG 1 cut(s) 113
StyD4I CCNGG 2 cut(s) 593, 873
TaaI ACNGT 5 cut(s) 122, 522, 805, 897, 1164
TaiI ACGT 1 cut(s) 1066
TaqI TCGA 3 cut(s) 517, 799, 1126
TasI AATT 8 cut(s) 85, 387, 502, 513, 655, 829, 917, 945
TfiI GAWTC 3 cut(s) 497, 634, 1123
Tru1I TTAA 2 cut(s) 177, 276
Tru9I TTAA 2 cut(s) 177, 276
TseFI GTSAC 1 cut(s) 742
TseI GCWGC 2 cut(s) 24, 130
Tsp45I GTSAC 1 cut(s) 742
TspDTI ATGAA 7 cut(s) 51, 236, 357, 395, 461, 474, 963
TspGWI ACGGA 1 cut(s) 28
Van91I CCANNNNNTGG 1 cut(s) 1136
Vha464I CTTAAG 1 cut(s) 176
VneI GTGCAC 1 cut(s) 1140
VpaK11BI GGWCC 2 cut(s) 995, 1103
XapI RAATTY 4 cut(s) 513, 829, 917, 945
XspI CTAG 1 cut(s) 113
Zsp2I ATGCAT 1 cut(s) 1010
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.