Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0000133

Physical Location & Seq

Genomic Coordinates Reverse (-)

71725697 .. 71797950

Gene Structure 72254 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00051170.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1554 bp

ATGGAAGTAACATTGGCTAGTTGGGTAGCGCTGAGCCTTGTGTTTATTAGCATAATAGTAAGATGGGCATGGAGTGTGCTGGATTGGCTTTGGCTGAAGCCGAAGAGGCTGGAAAGATGTTTGAGGGAGCAAGGCCTTCAGGGCAATTCCTACAGGTTCTTTTATGGAGACTTGAAGGAGAACTCTATCCTGCTCAAACATGCAAAATCCAAACCCAACCTCTCCACCTCCCATGACATAGCACCACGATTCATCCCTTTTCTCGATCAAACCGTAAAAACTTATGGTAAGAACTCTTTTGTTTGGATGGGCCCCGTACCAAGGGTGAACATTATGAATCCTGACGATATGAAAGATGTCTTCACAAAACTTGATGATTTTCCGAAGCCTGTATCAAACCCACTTTTCAGGTTCCTAGCAACGGGTCTTATACGCTATGAAGGTGAAAAATGGGCTAAACACAGGAGGATCATCAACCCATCATTCCATGTAGAGAAACTAAAGCAAATGTTACCCGCCTTTCACAAAAGTTGTGATGAGATGATTAAGGAATGGGAAAGCTTGGCTTCCAAAGAGGGCTCATCATGTCTGTTGGATGTTTGGCCATCTCTACAACACTTGACGGCCGATGTGATTTCTCGAACAGCATTTGGAAGTAGCTATCAGGAAGGAAGGAAAATATTTGAACTCCTCAAAGAGCAAACAGTGCTTGTAATAAATACATTACAAAGTGTTTACATACCAGGATGGAGGTTTCTACCAACTAAGATGAACAAGAGGATGAAGAAAATTGACAAAGAGGTAAAAGGTTTACTTAAGGGTATAATAAATAAAAGAGAGAAGGCCATTGGGGCAGGTGAAGCCTCTAAAGATGACTTATTAGGTGCACTTATGGAGTCAAAATTCAAGGACATCCAAGGAGATGGGAAGGTTGGGTTGAGTATTGAAGATGTAATTGAGGAATGTAAGTTGTTTTACTTTGCTGGGCAAGAGACTACTTCAGTATTGCTGGTTTGGACAATGATATTACTTGGTCAAAGTCAGAATTGGCAAGATCGAGCAAGACAAGAGGTATTGCAAGTCTTTGGATGCAACAAGCCAGACTTTGATGGACTATCTCATCTAAAAGTAGTAACAATGATTTTACTTGAAGTTCTTCGATTGTTCCCTGCATTGGTTGTGATCTCTCGAACCACCCACAAGAAAACACAACTCGGAAAATTCTCTCTACCAGCTGGAGTCCAAGTCGGCTTACCAACACTGCTTATTCACCGTGACAAGGAACTGTGGGGTGATGATGCAAACGAGTTCAATCCTGAGAGATTTTCGGAAGGAGTTTCCAAGGCAACAAAGAGCCAACTCTCATTCTTCCCTTTTGGAGGCGGTCCCCGGATTTGCATCGGACAAAACTTTGCTATGATGGAAGCGAAGTTGGCCTTATCATTGATCTTGCTACACTTTGACTTCAAGCTTTCTCCATCTTATGCTCATGCGCCTTCCGCACCTATGATTCAACCACAATATGGAGCTCCTATCATTTTACAGAAACGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004497 GO:0006082 GO:0006629 GO:0006720 GO:0006721 GO:0006722 GO:0008150 GO:0008152 GO:0008299 GO:0008300 GO:0008610 GO:0009056 GO:0009058 GO:0009987 GO:0016042 GO:0016053 GO:0016104 GO:0016105 GO:0016114 GO:0016115 GO:0016491 GO:0016705 GO:0016709 GO:0017144 GO:0019741 GO:0019742 GO:0019745 GO:0019752 GO:0032787 GO:0042180 GO:0042181 GO:0042182 GO:0043436 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044249 GO:0044255 GO:0044281 GO:0044282 GO:0044283 GO:0046394 GO:0055114 GO:0071704 GO:0072330 GO:1901360 GO:1901361 GO:1901362 GO:1901575 GO:1901576 GO:1901615 GO:1901617 GO:1902381 GO:1902382 GO:1902384 GO:1902386

KEGG Pathways

Metabolic & Signaling

ko00908 ko01100 ko01110 ko04726 map00908 map01100 map01110 map04726

Pfam Domains

Protein Families

p450

Protein Analysis

517

Amino Acids

58.82

Weight (kDa)

9.35

Isoelectric Point (pI)

40.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
p450	PF00067	88 - 494	5.1e-86	Cytochrome P450

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0000133)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G14610 AT3G14620 AT3G14630 AT3G14630 AT3G14640 AT3G14640 AT3G14650 AT3G14660 AT3G14660 AT3G14660 AT3G14680 AT3G14690 AT3G14690
fragaria_vesca	FvH4_1g08410 FvH4_2g31040 FvH4_3g17200 FvH4_3g17200 FvH4_3g17220 FvH4_3g17220 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17260 FvH4_3g17260 FvH4_3g17263 FvH4_3g17264 FvH4_3g17265 FvH4_3g17266 FvH4_5g18530 FvH4_5g19690 FvH4_7g03990 FvH4_7g03990 FvH4_7g03990 FvH4_7g03990 FvH4_7g03990 FvH4_7g17900 FvH4_7g17900
malus_domestica	MD02G1088200.v1.1 MD03G1224800.v1.1 MD03G1224900.v1.1 MD03G1225000.v1.1 MD11G1274100.v1.1 MD11G1274200.v1.1 MD11G1274300.v1.1 MD11G1274500.v1.1 MD11G1274600.v1.1 MD15G1050400.v1.1 MD15G1050500.v1.1 MD15G1050600.v1.1 MD15G1050700.v1.1
prunus_persica	Prupe.1G404900_v2.0.a1 Prupe.1G404900_v2.0.a1 Prupe.4G152600_v2.0.a1 Prupe.4G152700_v2.0.a1 Prupe.4G152800_v2.0.a1 Prupe.4G152900_v2.0.a1 Prupe.4G153000_v2.0.a1 Prupe.7G201400_v2.0.a1 Prupe.7G201400_v2.0.a1
pyrus_communis	pycom03g17310 pycom03g17330 pycom11g21520 pycom11g21600 pycom11g24180 pycom11g24190 pycom11g24200 pycom11g24210 pycom15g04890
rosa_chinensis	RchiOBHm_Chr1g0327671 RchiOBHm_Chr1g0327711 RchiOBHm_Chr1g0327721 RchiOBHm_Chr2g0094501 RchiOBHm_Chr5g0028601 RchiOBHm_Chr5g0028611 RchiOBHm_Chr5g0028621 RchiOBHm_Chr5g0028661 RchiOBHm_Chr5g0028671 RchiOBHm_Chr5g0028701 RchiOBHm_Chr5g0028721 RchiOBHm_Chr5g0028741 RchiOBHm_Chr5g0028751 RchiOBHm_Chr5g0028771 RchiOBHm_Chr5g0028821 RchiOBHm_Chr6g0311761 RchiOBHm_Chr7g0204421
rosa_laevigata	RLG00000003223 RLG00000003462 RLG00000010376 RLG00000012452 RLG00000016496 RLG00000018531 RLG00000018532 RLG00000018536 RLG00000029973 RLG00000029976 RLG00000033105 RLG00000033106 RLG00000033107 RLG00000033109 RLG00000033110 RLG00000033111 RLG00000033112 RLG00000033113 RLG00000033114 RLG00000033116 RLG00000033124
rosa_multiflora	Rmu_co8029584.1_g000001 Rmu_co8159878.1_g000001 Rmu_co8310611.1_g000001 Rmu_sc0001000.1_g000004 Rmu_sc0001000.1_g000016 Rmu_sc0001575.1_g000020 Rmu_sc0001575.1_g000021 Rmu_sc0001575.1_g000022 Rmu_sc0001575.1_g000027 Rmu_sc0001575.1_g000035 Rmu_sc0001575.1_g000040 Rmu_sc0002888.1_g000039 Rmu_sc0003951.1_g000001 Rmu_sc0004359.1_g000045 Rmu_sc0005178.1_g000001 Rmu_sc0005178.1_g000002 Rmu_sc0005178.1_g000004 Rmu_sc0023855.1_g000001 Rmu_sc0024393.1_g000001 Rmu_sc0035326.1_g000001
rosa_roxburghii	Rroxscaffold_1G00051080 Rroxscaffold_1G00051100 Rroxscaffold_1G00051110 Rroxscaffold_1G00051120 Rroxscaffold_1G00051150 Rroxscaffold_1G00051160 Rroxscaffold_1G00051170 Rroxscaffold_1G00051180 Rroxscaffold_2G00123610 Rroxscaffold_2G00147120 Rroxscaffold_3G00250540 Rroxscaffold_3G00253110 Rroxscaffold_3G00253120 Rroxscaffold_4G00322410 Rroxscaffold_4G00322440 Rroxscaffold_4G00322470 Rroxscaffold_7G00157330
rosa_rugosa	Rorug01G0069500 Rorug01G0069600 Rorug01G0069700 Rorug02G0044200 Rorug02G0227700 Rorug05G0109800 Rorug05G0109900 Rorug05G0110000 Rorug05G0110100 Rorug05G0110300 Rorug05G0110400 Rorug05G0110500 Rorug07G0083800 Rorug07G0083900.1 Rorug07G0103700
rosa_samantha	Rh1BG069000 Rh1BG069100 Rh1BG069200 Rh1CG084000 Rh1DG090700 Rh1DG090800 Rh1DG090900 Rh2AG092500 Rh2DG091600 Rh2DG309400 Rh5AG202100 Rh5AG202200 Rh5AG202500 Rh5AG202800 Rh5AG202900 Rh5CG220600 Rh5CG220700 Rh5CG220800 Rh5CG220900 Rh5CG221600 Rh5CG221900 Rh5CG222000 Rh5CG222100 Rh5DG203300 Rh5DG203400 Rh5DG203500 Rh5DG204100 Rh5DG204300 Rh5DG204400 Rh5DG204600 Rh6BG517600 Rh6CG523400 Rh6DG509100 Rh7AG213600 Rh7BG211400 Rh7DG220800
rosa_wichuraiana	Rw0G010630 Rw1G006750 Rw1G006770 Rw5G018300 Rw5G018310 Rw5G018330 Rw6G044090 Rw7G018510 Rw7G020290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	845
Acc36I	ACCTGC	1 cut(s)	845
AccB7I	CCANNNNNTGG	1 cut(s)	1523
AciI	CCGC	3 cut(s)	516, 1383, 1500
AclI	AACGTT	1 cut(s)	1549
AclWI	GGATC	1 cut(s)	476
AcoI	YGGCCR	2 cut(s)	602, 624
AcsI	RAATTY	2 cut(s)	902, 1220
AcuI	CTGAAG	3 cut(s)	116, 122, 984
AfaI	GTAC	1 cut(s)	318
AfeI	AGCGCT	1 cut(s)	30
AfiI	CCNNNNNNNGG	6 cut(s)	321, 421, 1174, 1279, 1379, 1523
AflII	CTTAAG	1 cut(s)	815
AgsI	TTSAA	8 cut(s)	175, 686, 907, 947, 1151, 1312, 1468, 1514
AjnI	CCWGG	1 cut(s)	742
AluBI	AGCT	5 cut(s)	561, 660, 1235, 1471, 1529
AluI	AGCT	5 cut(s)	561, 660, 1235, 1471, 1529
Alw21I	GWGCWC	2 cut(s)	889, 1531
Alw26I	GTCTC	2 cut(s)	162, 986
Alw44I	GTGCAC	1 cut(s)	885
AlwI	GGATC	1 cut(s)	476
Aor51HI	AGCGCT	1 cut(s)	30
AoxI	GGCC	6 cut(s)	133, 310, 602, 624, 843, 1434
ApaI	GGGCCC	1 cut(s)	314
ApaLI	GTGCAC	1 cut(s)	885
ApoI	RAATTY	2 cut(s)	902, 1220
Asp700I	GAANNNNTTC	1 cut(s)	1155
AspLEI	GCGC	2 cut(s)	31, 1495
AspS9I	GGNCC	3 cut(s)	310, 311, 1385
AsuC2I	CCSGG	1 cut(s)	1390
AsuHPI	GGTGA	5 cut(s)	337, 455, 869, 1262, 1304
AvaII	GGWCC	1 cut(s)	1385
BaeGI	GKGCMC	2 cut(s)	314, 889
BalI	TGGCCA	1 cut(s)	604
BanII	GRGCYC	3 cut(s)	314, 581, 1531
BbsI	GAAGAC	1 cut(s)	352
Bbv12I	GWGCWC	2 cut(s)	889, 1531
BccI	CCATC	9 cut(s)	57, 301, 487, 613, 741, 917, 1103, 1414, 1486
BceAI	ACGGC	1 cut(s)	639
BciT130I	CCWGG	1 cut(s)	744
BcnI	CCSGG	1 cut(s)	1390
BcoDI	GTCTC	2 cut(s)	162, 986
BfaI	CTAG	2 cut(s)	18, 416
BfmI	CTRYAG	1 cut(s)	151
BfoI	RGCGCY	1 cut(s)	32
BfrI	CTTAAG	1 cut(s)	815
BfuAI	ACCTGC	1 cut(s)	845
BglI	GCCNNNNNGGC	3 cut(s)	106, 141, 851
BlpI	GCTNAGC	1 cut(s)	32
Bme1390I	CCNGG	2 cut(s)	744, 1390
Bme18I	GGWCC	1 cut(s)	1385
BmgT120I	GGNCC	3 cut(s)	310, 311, 1385
BmiI	GGNNCC	4 cut(s)	312, 313, 413, 1387
BmrFI	CCNGG	2 cut(s)	744, 1390
BmsI	GCATC	3 cut(s)	1079, 1288, 1407
BpiI	GAAGAC	1 cut(s)	352
BpmI	CTGGAG	1 cut(s)	1257
Bpu1102I	GCTNAGC	1 cut(s)	32
BpuMI	CCSGG	1 cut(s)	1390
BsaBI	GATNNNNATC	1 cut(s)	1397
BsaJI	CCNNGG	4 cut(s)	320, 916, 1341, 1388
BsaXI	ACNNNNNCTCC	2 cut(s)	1230, 1260
Bsc4I	CCNNNNNNNGG	6 cut(s)	321, 421, 1174, 1279, 1379, 1523
Bse8I	GATNNNNATC	1 cut(s)	1397
BseBI	CCWGG	1 cut(s)	744
BseDI	CCNNGG	4 cut(s)	320, 916, 1341, 1388
BseGI	GGATG	7 cut(s)	252, 312, 601, 752, 786, 912, 1094
BseJI	GATNNNNATC	1 cut(s)	1397
BseLI	CCNNNNNNNGG	6 cut(s)	321, 421, 1174, 1279, 1379, 1523
BseMII	CTCAG	2 cut(s)	23, 1308
BseRI	GAGGAG	1 cut(s)	680
BseSI	GKGCMC	2 cut(s)	314, 889
BseX3I	CGGCCG	1 cut(s)	624
BseYI	CCCAGC	1 cut(s)	983
Bsh1285I	CGRYCG	1 cut(s)	627
BshFI	GGCC	6 cut(s)	135, 312, 604, 626, 845, 1436
BsiEI	CGRYCG	1 cut(s)	627
BsiHKAI	GWGCWC	2 cut(s)	889, 1531
BsiSI	CCGG	1 cut(s)	1390
BslFI	GGGAC	1 cut(s)	1371
BslI	CCNNNNNNNGG	6 cut(s)	321, 421, 1174, 1279, 1379, 1523
BsmAI	GTCTC	2 cut(s)	162, 986
BsmFI	GGGAC	1 cut(s)	1371
BsnI	GGCC	6 cut(s)	135, 312, 604, 626, 845, 1436
Bsp120I	GGGCCC	1 cut(s)	310
Bsp1286I	GDGCHC	4 cut(s)	314, 581, 889, 1531
Bsp143I	GATC	5 cut(s)	265, 468, 1054, 1182, 1446
Bsp1720I	GCTNAGC	1 cut(s)	32
BspACI	CCGC	3 cut(s)	516, 1383, 1500
BspANI	GGCC	6 cut(s)	135, 312, 604, 626, 845, 1436
BspCNI	CTCAG	2 cut(s)	24, 1309
BspLI	GGNNCC	4 cut(s)	312, 313, 413, 1387
BspMI	ACCTGC	1 cut(s)	845
BspPI	GGATC	1 cut(s)	476
BspTI	CTTAAG	1 cut(s)	815
BssECI	CCNNGG	4 cut(s)	320, 916, 1341, 1388
BssMI	GATC	5 cut(s)	265, 468, 1054, 1182, 1446
BssT1I	CCWWGG	3 cut(s)	320, 916, 1341
Bst2UI	CCWGG	1 cut(s)	744
Bst4CI	ACNGT	4 cut(s)	274, 706, 1274, 1287
Bst6I	CTCTTC	1 cut(s)	98
BstAFI	CTTAAG	1 cut(s)	815
BstAPI	GCANNNNNTGC	1 cut(s)	706
BstDEI	CTNAG	3 cut(s)	32, 765, 1317
BstENI	CCTNNNNNAGG	1 cut(s)	1377
BstF5I	GGATG	7 cut(s)	252, 312, 601, 752, 786, 912, 1094
BstH2I	RGCGCY	1 cut(s)	32
BstHHI	GCGC	2 cut(s)	31, 1495
BstKTI	GATC	5 cut(s)	268, 471, 1057, 1185, 1449
BstMAI	GTCTC	2 cut(s)	162, 986
BstMBI	GATC	5 cut(s)	265, 468, 1054, 1182, 1446
BstMCI	CGRYCG	1 cut(s)	627
BstMWI	GCNNNNNNNGC	8 cut(s)	85, 106, 141, 706, 851, 860, 1433, 1499
BstNI	CCWGG	1 cut(s)	744
BstNSI	RCATGY	1 cut(s)	203
BstSCI	CCNGG	2 cut(s)	742, 1388
BstSFI	CTRYAG	1 cut(s)	151
BstSLI	GKGCMC	2 cut(s)	314, 889
BstV2I	GAAGAC	1 cut(s)	352
BstXI	CCANNNNNNTGG	1 cut(s)	923
BstZI	CGGCCG	1 cut(s)	624
BsuRI	GGCC	6 cut(s)	135, 312, 604, 626, 845, 1436
BtsCI	GGATG	7 cut(s)	252, 312, 601, 752, 786, 912, 1094
BtsI	GCAGTG	1 cut(s)	1259
BtsIMutI	CAGTG	2 cut(s)	711, 1259
BveI	ACCTGC	1 cut(s)	845
CfoI	GCGC	2 cut(s)	31, 1495
Cfr13I	GGNCC	3 cut(s)	310, 311, 1385
Csp6I	GTAC	1 cut(s)	317
CviAII	CATG	6 cut(s)	69, 200, 233, 488, 585, 1490
CviQI	GTAC	1 cut(s)	317
DdeI	CTNAG	3 cut(s)	32, 765, 1317
DpnI	GATC	5 cut(s)	267, 470, 1056, 1184, 1448
DpnII	GATC	5 cut(s)	265, 468, 1054, 1182, 1446
EaeI	YGGCCR	2 cut(s)	602, 624
EagI	CGGCCG	1 cut(s)	624
Eam1104I	CTCTTC	1 cut(s)	98
EarI	CTCTTC	1 cut(s)	98
Ecl136II	GAGCTC	1 cut(s)	1529
EclXI	CGGCCG	1 cut(s)	624
Eco130I	CCWWGG	3 cut(s)	320, 916, 1341
Eco147I	AGGCCT	1 cut(s)	135
Eco24I	GRGCYC	3 cut(s)	314, 581, 1531
Eco47I	GGWCC	1 cut(s)	1385
Eco47III	AGCGCT	1 cut(s)	30
Eco52I	CGGCCG	1 cut(s)	624
Eco53kI	GAGCTC	1 cut(s)	1529
Eco57I	CTGAAG	3 cut(s)	116, 122, 984
EcoICRI	GAGCTC	1 cut(s)	1529
EcoNI	CCTNNNNNAGG	1 cut(s)	1377
EcoO109I	RGGNCCY	1 cut(s)	311
EcoRII	CCWGG	1 cut(s)	742
EcoT14I	CCWWGG	3 cut(s)	320, 916, 1341
EcoT38I	GRGCYC	3 cut(s)	314, 581, 1531
ErhI	CCWWGG	3 cut(s)	320, 916, 1341
FaeI	CATG	6 cut(s)	72, 203, 236, 491, 588, 1493
FalI	AAGNNNNNCTT	8 cut(s)	550, 582, 798, 830, 1088, 1120, 1421, 1453
FaqI	GGGAC	1 cut(s)	1371
FatI	CATG	6 cut(s)	68, 199, 232, 487, 584, 1489
FauI	CCCGC	1 cut(s)	523
FokI	GGATG	7 cut(s)	239, 319, 608, 759, 793, 899, 1101
FriOI	GRGCYC	3 cut(s)	314, 581, 1531
FspBI	CTAG	2 cut(s)	18, 416
GlaI	GCGC	2 cut(s)	30, 1494
GsaI	CCCAGC	1 cut(s)	987
GsuI	CTGGAG	1 cut(s)	1257
HaeII	RGCGCY	1 cut(s)	32
HaeIII	GGCC	6 cut(s)	135, 312, 604, 626, 845, 1436
HapII	CCGG	1 cut(s)	1390
HhaI	GCGC	2 cut(s)	31, 1495
Hin1II	CATG	6 cut(s)	72, 203, 236, 491, 588, 1493
Hin6I	GCGC	2 cut(s)	29, 1493
HinP1I	GCGC	2 cut(s)	29, 1493
HindIII	AAGCTT	2 cut(s)	559, 1469
HinfI	GANTC	5 cut(s)	249, 337, 896, 1239, 1510
HpaII	CCGG	1 cut(s)	1390
HphI	GGTGA	5 cut(s)	337, 455, 869, 1262, 1304
Hpy166II	GTNNAC	4 cut(s)	328, 736, 812, 887
Hpy188I	TCNGA	5 cut(s)	384, 1044, 1217, 1330, 1403
Hpy188III	TCNNGA	6 cut(s)	263, 341, 639, 665, 1188, 1316
Hpy8I	GTNNAC	4 cut(s)	328, 736, 812, 887
HpyAV	CCTTC	9 cut(s)	146, 169, 434, 662, 666, 835, 922, 1325, 1506
HpyCH4III	ACNGT	4 cut(s)	274, 706, 1274, 1287
HpyCH4IV	ACGT	1 cut(s)	1549
HpyCH4V	TGCA	7 cut(s)	203, 887, 1078, 1092, 1172, 1301, 1398
HpyF10VI	GCNNNNNNNGC	8 cut(s)	85, 106, 141, 706, 851, 860, 1433, 1499
HpyF3I	CTNAG	3 cut(s)	32, 765, 1317
HpySE526I	ACGT	1 cut(s)	1549
Hsp92II	CATG	6 cut(s)	72, 203, 236, 491, 588, 1493
HspAI	GCGC	2 cut(s)	29, 1493
Kzo9I	GATC	5 cut(s)	265, 468, 1054, 1182, 1446
LmnI	GCTCC	3 cut(s)	127, 1526, 1534
LweI	GCATC	3 cut(s)	1079, 1288, 1407
MaeI	CTAG	2 cut(s)	18, 416
MaeII	ACGT	1 cut(s)	1549
MaeIII	GTNAC	4 cut(s)	7, 510, 1132, 1274
MalI	GATC	5 cut(s)	267, 470, 1056, 1184, 1448
MboI	GATC	5 cut(s)	265, 468, 1054, 1182, 1446
MboII	GAAGA	6 cut(s)	115, 352, 796, 959, 1148, 1360
MhlI	GDGCHC	4 cut(s)	314, 581, 889, 1531
MlsI	TGGCCA	1 cut(s)	604
MluCI	AATT	6 cut(s)	145, 789, 902, 954, 1045, 1220
MluNI	TGGCCA	1 cut(s)	604
MlyI	GAGTC	2 cut(s)	905, 1248
MmeI	TCCRAC	1 cut(s)	573
Mox20I	TGGCCA	1 cut(s)	604
MroXI	GAANNNNTTC	1 cut(s)	1155
MscI	TGGCCA	1 cut(s)	604
MseI	TTAA	3 cut(s)	546, 816, 1552
Msp20I	TGGCCA	1 cut(s)	604
MspA1I	CMGCKG	1 cut(s)	1235
MspCI	CTTAAG	1 cut(s)	815
MspI	CCGG	1 cut(s)	1390
MspR9I	CCNGG	2 cut(s)	744, 1390
MvaI	CCWGG	1 cut(s)	744
MwoI	GCNNNNNNNGC	8 cut(s)	85, 106, 141, 706, 851, 860, 1433, 1499
NciI	CCSGG	1 cut(s)	1390
NdeII	GATC	5 cut(s)	265, 468, 1054, 1182, 1446
NlaIII	CATG	6 cut(s)	72, 203, 236, 491, 588, 1493
NlaIV	GGNNCC	4 cut(s)	312, 313, 413, 1387
NmuCI	GTSAC	1 cut(s)	1274
NspI	RCATGY	1 cut(s)	203
PaqCI	CACCTGC	1 cut(s)	845
PceI	AGGCCT	1 cut(s)	135
PcsI	WCGNNNNNNNCGW	1 cut(s)	270
PdmI	GAANNNNTTC	1 cut(s)	1155
PfeI	GAWTC	3 cut(s)	249, 337, 1510
PflMI	CCANNNNNTGG	1 cut(s)	1523
PleI	GAGTC	2 cut(s)	904, 1247
PpsI	GAGTC	2 cut(s)	904, 1247
Psp124BI	GAGCTC	1 cut(s)	1531
Psp1406I	AACGTT	1 cut(s)	1549
Psp6I	CCWGG	1 cut(s)	742
PspFI	CCCAGC	1 cut(s)	983
PspGI	CCWGG	1 cut(s)	742
PspN4I	GGNNCC	4 cut(s)	312, 313, 413, 1387
PspOMI	GGGCCC	1 cut(s)	310
PspPI	GGNCC	3 cut(s)	310, 311, 1385
PvuII	CAGCTG	1 cut(s)	1235
RsaI	GTAC	1 cut(s)	318
RsaNI	GTAC	1 cut(s)	317
SacI	GAGCTC	1 cut(s)	1531
SaqAI	TTAA	3 cut(s)	546, 816, 1552
Sau3AI	GATC	5 cut(s)	265, 468, 1054, 1182, 1446
Sau96I	GGNCC	3 cut(s)	310, 311, 1385
SchI	GAGTC	2 cut(s)	905, 1248
ScrFI	CCNGG	2 cut(s)	744, 1390
SduI	GDGCHC	4 cut(s)	314, 581, 889, 1531
SfaNI	GCATC	3 cut(s)	1079, 1288, 1407
SfcI	CTRYAG	1 cut(s)	151
SinI	GGWCC	1 cut(s)	1385
SmlI	CTYRAG	1 cut(s)	815
SmoI	CTYRAG	1 cut(s)	815
Sse9I	AATT	6 cut(s)	145, 789, 902, 954, 1045, 1220
SseBI	AGGCCT	1 cut(s)	135
SsiI	CCGC	3 cut(s)	516, 1383, 1500
SspI	AATATT	1 cut(s)	681
SspMI	CTAG	2 cut(s)	18, 416
SstI	GAGCTC	1 cut(s)	1531
StuI	AGGCCT	1 cut(s)	135
StyD4I	CCNGG	2 cut(s)	742, 1388
StyI	CCWWGG	3 cut(s)	320, 916, 1341
TaaI	ACNGT	4 cut(s)	274, 706, 1274, 1287
TaiI	ACGT	1 cut(s)	1552
TaqI	TCGA	5 cut(s)	264, 640, 1057, 1159, 1189
TasI	AATT	6 cut(s)	145, 789, 902, 954, 1045, 1220
TfiI	GAWTC	3 cut(s)	249, 337, 1510
Tru1I	TTAA	3 cut(s)	546, 816, 1552
Tru9I	TTAA	3 cut(s)	546, 816, 1552
TscAI	CASTG	2 cut(s)	711, 1266
TseFI	GTSAC	1 cut(s)	1274
Tsp45I	GTSAC	1 cut(s)	1274
TspDTI	ATGAA	6 cut(s)	241, 350, 365, 453, 785, 797
TspRI	CASTG	2 cut(s)	711, 1266
Van91I	CCANNNNNTGG	1 cut(s)	1523
Vha464I	CTTAAG	1 cut(s)	815
VneI	GTGCAC	1 cut(s)	885
VpaK11BI	GGWCC	1 cut(s)	1385
XagI	CCTNNNNNAGG	1 cut(s)	1377
XapI	RAATTY	2 cut(s)	902, 1220
XceI	RCATGY	1 cut(s)	203
XmnI	GAANNNNTTC	1 cut(s)	1155
XspI	CTAG	2 cut(s)	18, 416

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.