Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0000133

Physical Location & Seq

Genomic Coordinates Forward (+)

23663904 .. 23748966

Gene Structure 85063 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG202200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1401 bp

ATGAAAGTAACATTGCCTAGTTGGGTAGCGCTGAGCCTTGTGTTTATTAGCATAATAGTAAGATGGGCATGGAGTGTACTGGATTGGGTTTGGCTGAAGCCGAAGAAGCTAGAAAGATGTTTGAGGGAGCAAGGCCTTCAAGGCAATTCCTACAGGTTCTTTTATGGAGACTTGAAGGAGAACTCTATCCTGCTCAAACATGCGAAATCCAAACCCATGAACCTCTCCACCTCCCATGACATAGCACCACGACTCATCCCTTTTCTCGATCAAACCGTAAAAACTTATGGTAAGAACTCTTTTGTTTGGATGGGCCCCGTACCAAGGGTGAACATTATGAATCCTGAAGATATGAAAGATGTCTTCACAAAACTTGATGACTTTCCTAAGCCAGTTTCAAACCCACTTTTCAAGTTGCTAGCAACGGGTGTTGCAAGCTATGAAGGTGAAAAATGGGCTAAACACAGGAGGATCATCAACCCATCATTCCATGTAGAGAAACTAAAGCAAATGTTACCCGCCTTTCACAAAAGTTGTGATGAGATGATTAAGGAATGGGAAAGCTTGGCGTCCAAAGAGGGCTCGTCATATCTGTTGGATGTTTGGCCATCTCTGCAACACTTGACGGCCGATGTGATTTCTCGAACAGCATTTGGAAGTAGCTATCAAGAAGGAAGGAAAATATTTGAACTCCTCAAAGAGCAAGCAATGCTTGTAATAAATGCATTACAAAGTGTTTACATACCAGGATGGAGGTTTCTACCAACTAAAATGAACAAGAGGATGAAGAAAATTGACAAAGAGGTAAAAGGTTTACTTAAGGGTATAATAAATAAAAGAGAGAAGGCCATTGGGGCAGGTGAAGCCTCTAAAGATGACTTATTAGGTACACTTATGGAGTCAAATTTCAAGGACATCCAAGGAGATGGGAAGGTTGGGATGAGTATTGAAGATGTAATTGAGGAATGTAAAGTGTTTTACTTTGCTGGGCAAGAGACTACTTCAGTATTGCTGGTTTGGACAATGATATTACTTGGTCAAAGTCAGAATTGGCAAGATCGAGCAAAACAAGAGGTTTTGCAAGTCTTTGGAAGCAACAAGCCAGACTTTGATGGACTATCTCATCTAAAAGTAGTAACAATGATTTTACTTGAAGTTCTTCGATTGTACCCTGCAGTGGTTGTGATCTCTCGAATCACCCACAAGAAAACACAACTCGGGAAATTCTCATTACCAGCTGGAGTGCAAGTCGGCTTACCAACACTGCTCATTCACCGTGACAAGGAACTGTATAGTTTAGAGGTAGAAGATGAAGGAAAAATGAAAGAAAAGAAACTAACGCGAAAGATCATGAAGCACTATATTGTTATTGACTTGATTAAGGACTATGTAGGCCCGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004497 GO:0006082 GO:0006629 GO:0006720 GO:0006721 GO:0006722 GO:0008150 GO:0008152 GO:0008299 GO:0008300 GO:0008610 GO:0009056 GO:0009058 GO:0009987 GO:0016042 GO:0016053 GO:0016104 GO:0016105 GO:0016114 GO:0016115 GO:0016491 GO:0016705 GO:0016709 GO:0017144 GO:0019741 GO:0019742 GO:0019745 GO:0019752 GO:0032787 GO:0042180 GO:0042181 GO:0042182 GO:0043436 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044249 GO:0044255 GO:0044281 GO:0044282 GO:0044283 GO:0046394 GO:0055114 GO:0071704 GO:0072330 GO:1901360 GO:1901361 GO:1901362 GO:1901575 GO:1901576 GO:1901615 GO:1901617 GO:1902381 GO:1902382 GO:1902384 GO:1902386

KEGG Pathways

Metabolic & Signaling

ko00908 ko01100 ko01110 ko04726 map00908 map01100 map01110 map04726

Pfam Domains

Protein Families

p450

Protein Analysis

466

Amino Acids

53.33

Weight (kDa)

9.37

Isoelectric Point (pI)

36.1

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
p450	PF00067	89 - 432	2.2e-59	Cytochrome P450

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

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Orthologous Genes (Group: OG0000133)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G14610 AT3G14620 AT3G14630 AT3G14630 AT3G14640 AT3G14640 AT3G14650 AT3G14660 AT3G14660 AT3G14660 AT3G14680 AT3G14690 AT3G14690
fragaria_vesca	FvH4_1g08410 FvH4_2g31040 FvH4_3g17200 FvH4_3g17200 FvH4_3g17220 FvH4_3g17220 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17260 FvH4_3g17260 FvH4_3g17263 FvH4_3g17264 FvH4_3g17265 FvH4_3g17266 FvH4_5g18530 FvH4_5g19690 FvH4_7g03990 FvH4_7g03990 FvH4_7g03990 FvH4_7g03990 FvH4_7g03990 FvH4_7g17900 FvH4_7g17900
malus_domestica	MD02G1088200.v1.1 MD03G1224800.v1.1 MD03G1224900.v1.1 MD03G1225000.v1.1 MD11G1274100.v1.1 MD11G1274200.v1.1 MD11G1274300.v1.1 MD11G1274500.v1.1 MD11G1274600.v1.1 MD15G1050400.v1.1 MD15G1050500.v1.1 MD15G1050600.v1.1 MD15G1050700.v1.1
prunus_persica	Prupe.1G404900_v2.0.a1 Prupe.1G404900_v2.0.a1 Prupe.4G152600_v2.0.a1 Prupe.4G152700_v2.0.a1 Prupe.4G152800_v2.0.a1 Prupe.4G152900_v2.0.a1 Prupe.4G153000_v2.0.a1 Prupe.7G201400_v2.0.a1 Prupe.7G201400_v2.0.a1
pyrus_communis	pycom03g17310 pycom03g17330 pycom11g21520 pycom11g21600 pycom11g24180 pycom11g24190 pycom11g24200 pycom11g24210 pycom15g04890
rosa_chinensis	RchiOBHm_Chr1g0327671 RchiOBHm_Chr1g0327711 RchiOBHm_Chr1g0327721 RchiOBHm_Chr2g0094501 RchiOBHm_Chr5g0028601 RchiOBHm_Chr5g0028611 RchiOBHm_Chr5g0028621 RchiOBHm_Chr5g0028661 RchiOBHm_Chr5g0028671 RchiOBHm_Chr5g0028701 RchiOBHm_Chr5g0028721 RchiOBHm_Chr5g0028741 RchiOBHm_Chr5g0028751 RchiOBHm_Chr5g0028771 RchiOBHm_Chr5g0028821 RchiOBHm_Chr6g0311761 RchiOBHm_Chr7g0204421
rosa_laevigata	RLG00000003223 RLG00000003462 RLG00000010376 RLG00000012452 RLG00000016496 RLG00000018531 RLG00000018532 RLG00000018536 RLG00000029973 RLG00000029976 RLG00000033105 RLG00000033106 RLG00000033107 RLG00000033109 RLG00000033110 RLG00000033111 RLG00000033112 RLG00000033113 RLG00000033114 RLG00000033116 RLG00000033124
rosa_multiflora	Rmu_co8029584.1_g000001 Rmu_co8159878.1_g000001 Rmu_co8310611.1_g000001 Rmu_sc0001000.1_g000004 Rmu_sc0001000.1_g000016 Rmu_sc0001575.1_g000020 Rmu_sc0001575.1_g000021 Rmu_sc0001575.1_g000022 Rmu_sc0001575.1_g000027 Rmu_sc0001575.1_g000035 Rmu_sc0001575.1_g000040 Rmu_sc0002888.1_g000039 Rmu_sc0003951.1_g000001 Rmu_sc0004359.1_g000045 Rmu_sc0005178.1_g000001 Rmu_sc0005178.1_g000002 Rmu_sc0005178.1_g000004 Rmu_sc0023855.1_g000001 Rmu_sc0024393.1_g000001 Rmu_sc0035326.1_g000001
rosa_roxburghii	Rroxscaffold_1G00051080 Rroxscaffold_1G00051100 Rroxscaffold_1G00051110 Rroxscaffold_1G00051120 Rroxscaffold_1G00051150 Rroxscaffold_1G00051160 Rroxscaffold_1G00051170 Rroxscaffold_1G00051180 Rroxscaffold_2G00123610 Rroxscaffold_2G00147120 Rroxscaffold_3G00250540 Rroxscaffold_3G00253110 Rroxscaffold_3G00253120 Rroxscaffold_4G00322410 Rroxscaffold_4G00322440 Rroxscaffold_4G00322470 Rroxscaffold_7G00157330
rosa_rugosa	Rorug01G0069500 Rorug01G0069600 Rorug01G0069700 Rorug02G0044200 Rorug02G0227700 Rorug05G0109800 Rorug05G0109900 Rorug05G0110000 Rorug05G0110100 Rorug05G0110300 Rorug05G0110400 Rorug05G0110500 Rorug07G0083800 Rorug07G0083900.1 Rorug07G0103700
rosa_samantha	Rh1BG069000 Rh1BG069100 Rh1BG069200 Rh1CG084000 Rh1DG090700 Rh1DG090800 Rh1DG090900 Rh2AG092500 Rh2DG091600 Rh2DG309400 Rh5AG202100 Rh5AG202200 Rh5AG202500 Rh5AG202800 Rh5AG202900 Rh5CG220600 Rh5CG220700 Rh5CG220800 Rh5CG220900 Rh5CG221600 Rh5CG221900 Rh5CG222000 Rh5CG222100 Rh5DG203300 Rh5DG203400 Rh5DG203500 Rh5DG204100 Rh5DG204300 Rh5DG204400 Rh5DG204600 Rh6BG517600 Rh6CG523400 Rh6DG509100 Rh7AG213600 Rh7BG211400 Rh7DG220800
rosa_wichuraiana	Rw0G010630 Rw1G006750 Rw1G006770 Rw5G018300 Rw5G018310 Rw5G018330 Rw6G044090 Rw7G018510 Rw7G020290

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	848
Acc36I	ACCTGC	1 cut(s)	848
AccII	CGCG	1 cut(s)	1342
AciI	CCGC	1 cut(s)	519
AclWI	GGATC	1 cut(s)	479
AcoI	YGGCCR	2 cut(s)	605, 627
AcsI	RAATTY	2 cut(s)	904, 1223
AcuI	CTGAAG	3 cut(s)	116, 366, 987
AcyI	GRCGYC	1 cut(s)	569
AfaI	GTAC	4 cut(s)	78, 321, 889, 1169
AfeI	AGCGCT	1 cut(s)	30
AfiI	CCNNNNNNNGG	3 cut(s)	324, 1177, 1282
AflII	CTTAAG	1 cut(s)	818
AgsI	TTSAA	8 cut(s)	140, 175, 399, 412, 689, 910, 950, 1154
AjnI	CCWGG	1 cut(s)	745
AluBI	AGCT	5 cut(s)	109, 438, 564, 663, 1238
AluI	AGCT	5 cut(s)	109, 438, 564, 663, 1238
Alw26I	GTCTC	2 cut(s)	162, 989
AlwI	GGATC	1 cut(s)	479
Ama87I	CYCGRG	1 cut(s)	1217
Aor51HI	AGCGCT	1 cut(s)	30
AoxI	GGCC	6 cut(s)	133, 313, 605, 627, 846, 1393
ApaI	GGGCCC	1 cut(s)	317
ApoI	RAATTY	2 cut(s)	904, 1223
Asp700I	GAANNNNTTC	1 cut(s)	1158
AspLEI	GCGC	1 cut(s)	31
AspS9I	GGNCC	3 cut(s)	313, 314, 1394
AsuHPI	GGTGA	5 cut(s)	340, 458, 872, 1189, 1265
AsuNHI	GCTAGC	1 cut(s)	418
AvaI	CYCGRG	1 cut(s)	1217
BaeGI	GKGCMC	1 cut(s)	317
BalI	TGGCCA	1 cut(s)	607
BanII	GRGCYC	2 cut(s)	317, 584
BbsI	GAAGAC	1 cut(s)	355
BccI	CCATC	7 cut(s)	57, 304, 490, 616, 744, 920, 1106
BceAI	ACGGC	1 cut(s)	642
BciT130I	CCWGG	1 cut(s)	747
BcoDI	GTCTC	2 cut(s)	162, 989
BfaI	CTAG	3 cut(s)	18, 110, 419
BfmI	CTRYAG	2 cut(s)	151, 1173
BfoI	RGCGCY	1 cut(s)	32
BfrI	CTTAAG	1 cut(s)	818
BfuAI	ACCTGC	1 cut(s)	848
BglI	GCCNNNNNGGC	2 cut(s)	141, 854
BlpI	GCTNAGC	1 cut(s)	32
Bme1390I	CCNGG	1 cut(s)	747
BmeT110I	CYCGRG	1 cut(s)	1217
BmgT120I	GGNCC	3 cut(s)	313, 314, 1394
BmiI	GGNNCC	2 cut(s)	315, 316
BmrFI	CCNGG	1 cut(s)	747
BmtI	GCTAGC	1 cut(s)	422
BpiI	GAAGAC	1 cut(s)	355
BpmI	CTGGAG	1 cut(s)	1260
Bpu10I	CCTNAGC	1 cut(s)	387
Bpu1102I	GCTNAGC	1 cut(s)	32
BsaHI	GRCGYC	1 cut(s)	569
BsaJI	CCNNGG	2 cut(s)	323, 919
BsaXI	ACNNNNNCTCC	2 cut(s)	1233, 1263
Bsc4I	CCNNNNNNNGG	3 cut(s)	324, 1177, 1282
Bse1I	ACTGG	2 cut(s)	84, 392
Bse3DI	GCAATG	2 cut(s)	11, 714
BseBI	CCWGG	1 cut(s)	747
BseDI	CCNNGG	2 cut(s)	323, 919
BseGI	GGATG	7 cut(s)	255, 315, 604, 755, 789, 915, 945
BseLI	CCNNNNNNNGG	3 cut(s)	324, 1177, 1282
BseMI	GCAATG	2 cut(s)	11, 714
BseMII	CTCAG	1 cut(s)	23
BseNI	ACTGG	2 cut(s)	84, 392
BseRI	GAGGAG	1 cut(s)	683
BseSI	GKGCMC	1 cut(s)	317
BseX3I	CGGCCG	1 cut(s)	627
BseYI	CCCAGC	1 cut(s)	986
Bsh1236I	CGCG	1 cut(s)	1342
Bsh1285I	CGRYCG	1 cut(s)	630
BshFI	GGCC	6 cut(s)	135, 315, 607, 629, 848, 1395
BsiEI	CGRYCG	1 cut(s)	630
BsiHKCI	CYCGRG	1 cut(s)	1217
BslI	CCNNNNNNNGG	3 cut(s)	324, 1177, 1282
BsmAI	GTCTC	2 cut(s)	162, 989
BsnI	GGCC	6 cut(s)	135, 315, 607, 629, 848, 1395
BsoBI	CYCGRG	1 cut(s)	1217
Bsp120I	GGGCCC	1 cut(s)	313
Bsp1286I	GDGCHC	2 cut(s)	317, 584
Bsp143I	GATC	5 cut(s)	268, 471, 1057, 1185, 1347
Bsp1720I	GCTNAGC	1 cut(s)	32
BspACI	CCGC	1 cut(s)	519
BspANI	GGCC	6 cut(s)	135, 315, 607, 629, 848, 1395
BspCNI	CTCAG	1 cut(s)	24
BspFNI	CGCG	1 cut(s)	1342
BspHI	TCATGA	1 cut(s)	1350
BspLI	GGNNCC	2 cut(s)	315, 316
BspMAI	CTGCAG	1 cut(s)	1177
BspMI	ACCTGC	1 cut(s)	848
BspOI	GCTAGC	1 cut(s)	422
BspPI	GGATC	1 cut(s)	479
BspTI	CTTAAG	1 cut(s)	818
BsrDI	GCAATG	2 cut(s)	11, 714
BsrI	ACTGG	2 cut(s)	84, 392
BssECI	CCNNGG	2 cut(s)	323, 919
BssMI	GATC	5 cut(s)	268, 471, 1057, 1185, 1347
BssNI	GRCGYC	1 cut(s)	569
BssT1I	CCWWGG	2 cut(s)	323, 919
Bst2UI	CCWGG	1 cut(s)	747
Bst4CI	ACNGT	3 cut(s)	277, 1277, 1290
BstACI	GRCGYC	1 cut(s)	569
BstAFI	CTTAAG	1 cut(s)	818
BstAPI	GCANNNNNTGC	1 cut(s)	709
BstC8I	GCNNGC	3 cut(s)	420, 436, 705
BstDEI	CTNAG	2 cut(s)	32, 387
BstF5I	GGATG	7 cut(s)	255, 315, 604, 755, 789, 915, 945
BstFNI	CGCG	1 cut(s)	1342
BstH2I	RGCGCY	1 cut(s)	32
BstHHI	GCGC	1 cut(s)	31
BstKTI	GATC	5 cut(s)	271, 474, 1060, 1188, 1350
BstMAI	GTCTC	2 cut(s)	162, 989
BstMBI	GATC	5 cut(s)	268, 471, 1057, 1185, 1347
BstMCI	CGRYCG	1 cut(s)	630
BstMWI	GCNNNNNNNGC	6 cut(s)	106, 141, 613, 709, 854, 863
BstNI	CCWGG	1 cut(s)	747
BstNSI	RCATGY	1 cut(s)	203
BstSCI	CCNGG	1 cut(s)	745
BstSFI	CTRYAG	2 cut(s)	151, 1173
BstSLI	GKGCMC	1 cut(s)	317
BstUI	CGCG	1 cut(s)	1342
BstV2I	GAAGAC	1 cut(s)	355
BstXI	CCANNNNNNTGG	1 cut(s)	926
BstZI	CGGCCG	1 cut(s)	627
BsuRI	GGCC	6 cut(s)	135, 315, 607, 629, 848, 1395
BtsCI	GGATG	7 cut(s)	255, 315, 604, 755, 789, 915, 945
BtsI	GCAGTG	2 cut(s)	1182, 1262
BtsIMutI	CAGTG	2 cut(s)	1182, 1262
BveI	ACCTGC	1 cut(s)	848
Cac8I	GCNNGC	3 cut(s)	420, 436, 705
CciI	TCATGA	1 cut(s)	1350
CfoI	GCGC	1 cut(s)	31
Cfr13I	GGNCC	3 cut(s)	313, 314, 1394
CseI	GACGC	1 cut(s)	558
Csp6I	GTAC	4 cut(s)	77, 320, 888, 1168
CviAII	CATG	6 cut(s)	69, 200, 217, 236, 491, 1351
CviQI	GTAC	4 cut(s)	77, 320, 888, 1168
DdeI	CTNAG	2 cut(s)	32, 387
DpnI	GATC	5 cut(s)	270, 473, 1059, 1187, 1349
DpnII	GATC	5 cut(s)	268, 471, 1057, 1185, 1347
EaeI	YGGCCR	2 cut(s)	605, 627
EagI	CGGCCG	1 cut(s)	627
EclXI	CGGCCG	1 cut(s)	627
Eco130I	CCWWGG	2 cut(s)	323, 919
Eco147I	AGGCCT	1 cut(s)	135
Eco24I	GRGCYC	2 cut(s)	317, 584
Eco47III	AGCGCT	1 cut(s)	30
Eco52I	CGGCCG	1 cut(s)	627
Eco57I	CTGAAG	3 cut(s)	116, 366, 987
Eco88I	CYCGRG	1 cut(s)	1217
EcoO109I	RGGNCCY	1 cut(s)	314
EcoRII	CCWGG	1 cut(s)	745
EcoT14I	CCWWGG	2 cut(s)	323, 919
EcoT22I	ATGCAT	1 cut(s)	727
EcoT38I	GRGCYC	2 cut(s)	317, 584
ErhI	CCWWGG	2 cut(s)	323, 919
FaeI	CATG	6 cut(s)	72, 203, 220, 239, 494, 1354
FalI	AAGNNNNNCTT	6 cut(s)	696, 728, 801, 833, 1091, 1123
FatI	CATG	6 cut(s)	68, 199, 216, 235, 490, 1350
FauI	CCCGC	1 cut(s)	526
FokI	GGATG	7 cut(s)	242, 322, 611, 762, 796, 902, 952
FriOI	GRGCYC	2 cut(s)	317, 584
FspBI	CTAG	3 cut(s)	18, 110, 419
GlaI	GCGC	1 cut(s)	30
GsaI	CCCAGC	1 cut(s)	990
GsuI	CTGGAG	1 cut(s)	1260
HaeII	RGCGCY	1 cut(s)	32
HaeIII	GGCC	6 cut(s)	135, 315, 607, 629, 848, 1395
HgaI	GACGC	1 cut(s)	558
HhaI	GCGC	1 cut(s)	31
Hin1I	GRCGYC	1 cut(s)	569
Hin1II	CATG	6 cut(s)	72, 203, 220, 239, 494, 1354
Hin6I	GCGC	1 cut(s)	29
HinP1I	GCGC	1 cut(s)	29
HindIII	AAGCTT	1 cut(s)	562
HinfI	GANTC	4 cut(s)	252, 340, 899, 1194
HphI	GGTGA	5 cut(s)	340, 458, 872, 1189, 1265
Hpy166II	GTNNAC	5 cut(s)	77, 331, 739, 815, 890
Hpy188I	TCNGA	1 cut(s)	1047
Hpy188III	TCNNGA	7 cut(s)	266, 344, 642, 668, 1191, 1219, 1351
Hpy8I	GTNNAC	5 cut(s)	77, 331, 739, 815, 890
HpyAV	CCTTC	8 cut(s)	146, 169, 437, 665, 669, 838, 925, 1307
HpyCH4III	ACNGT	3 cut(s)	277, 1277, 1290
HpyCH4V	TGCA	6 cut(s)	434, 616, 725, 1081, 1175, 1246
HpyF10VI	GCNNNNNNNGC	6 cut(s)	106, 141, 613, 709, 854, 863
HpyF3I	CTNAG	2 cut(s)	32, 387
Hsp92I	GRCGYC	1 cut(s)	569
Hsp92II	CATG	6 cut(s)	72, 203, 220, 239, 494, 1354
HspAI	GCGC	1 cut(s)	29
Kzo9I	GATC	5 cut(s)	268, 471, 1057, 1185, 1347
LmnI	GCTCC	1 cut(s)	127
MaeI	CTAG	3 cut(s)	18, 110, 419
MaeIII	GTNAC	4 cut(s)	7, 513, 1135, 1277
MalI	GATC	5 cut(s)	270, 473, 1059, 1187, 1349
MboI	GATC	5 cut(s)	268, 471, 1057, 1185, 1347
MboII	GAAGA	7 cut(s)	115, 355, 359, 799, 962, 1151, 1319
MhlI	GDGCHC	2 cut(s)	317, 584
MlsI	TGGCCA	1 cut(s)	607
MluCI	AATT	6 cut(s)	145, 792, 904, 957, 1048, 1223
MluNI	TGGCCA	1 cut(s)	607
MlyI	GAGTC	2 cut(s)	246, 908
MmeI	TCCRAC	1 cut(s)	576
Mox20I	TGGCCA	1 cut(s)	607
Mph1103I	ATGCAT	1 cut(s)	727
MroXI	GAANNNNTTC	1 cut(s)	1158
MscI	TGGCCA	1 cut(s)	607
MseI	TTAA	3 cut(s)	549, 819, 1380
Msp20I	TGGCCA	1 cut(s)	607
MspA1I	CMGCKG	1 cut(s)	1238
MspCI	CTTAAG	1 cut(s)	818
MspR9I	CCNGG	1 cut(s)	747
MvaI	CCWGG	1 cut(s)	747
MvnI	CGCG	1 cut(s)	1342
MwoI	GCNNNNNNNGC	6 cut(s)	106, 141, 613, 709, 854, 863
NdeII	GATC	5 cut(s)	268, 471, 1057, 1185, 1347
NheI	GCTAGC	1 cut(s)	418
NlaIII	CATG	6 cut(s)	72, 203, 220, 239, 494, 1354
NlaIV	GGNNCC	2 cut(s)	315, 316
NmuCI	GTSAC	1 cut(s)	1277
NsiI	ATGCAT	1 cut(s)	727
NspI	RCATGY	1 cut(s)	203
PagI	TCATGA	1 cut(s)	1350
PaqCI	CACCTGC	1 cut(s)	848
PceI	AGGCCT	1 cut(s)	135
PcsI	WCGNNNNNNNCGW	1 cut(s)	273
PdmI	GAANNNNTTC	1 cut(s)	1158
PfeI	GAWTC	2 cut(s)	340, 1194
PleI	GAGTC	2 cut(s)	246, 907
PpsI	GAGTC	2 cut(s)	246, 907
Psp6I	CCWGG	1 cut(s)	745
PspFI	CCCAGC	1 cut(s)	986
PspGI	CCWGG	1 cut(s)	745
PspN4I	GGNNCC	2 cut(s)	315, 316
PspOMI	GGGCCC	1 cut(s)	313
PspPI	GGNCC	3 cut(s)	313, 314, 1394
PstI	CTGCAG	1 cut(s)	1177
PvuII	CAGCTG	1 cut(s)	1238
RsaI	GTAC	4 cut(s)	78, 321, 889, 1169
RsaNI	GTAC	4 cut(s)	77, 320, 888, 1168
SaqAI	TTAA	3 cut(s)	549, 819, 1380
Sau3AI	GATC	5 cut(s)	268, 471, 1057, 1185, 1347
Sau96I	GGNCC	3 cut(s)	313, 314, 1394
SchI	GAGTC	2 cut(s)	246, 908
ScrFI	CCNGG	1 cut(s)	747
SduI	GDGCHC	2 cut(s)	317, 584
SfcI	CTRYAG	2 cut(s)	151, 1173
SmlI	CTYRAG	1 cut(s)	818
SmoI	CTYRAG	1 cut(s)	818
Sse9I	AATT	6 cut(s)	145, 792, 904, 957, 1048, 1223
SseBI	AGGCCT	1 cut(s)	135
SsiI	CCGC	1 cut(s)	519
SspI	AATATT	1 cut(s)	684
SspMI	CTAG	3 cut(s)	18, 110, 419
StuI	AGGCCT	1 cut(s)	135
StyD4I	CCNGG	1 cut(s)	745
StyI	CCWWGG	2 cut(s)	323, 919
TaaI	ACNGT	3 cut(s)	277, 1277, 1290
TaqI	TCGA	5 cut(s)	267, 643, 1060, 1162, 1192
TasI	AATT	6 cut(s)	145, 792, 904, 957, 1048, 1223
TatI	WGTACW	1 cut(s)	76
TfiI	GAWTC	2 cut(s)	340, 1194
Tru1I	TTAA	3 cut(s)	549, 819, 1380
Tru9I	TTAA	3 cut(s)	549, 819, 1380
TscAI	CASTG	2 cut(s)	1182, 1269
TseFI	GTSAC	1 cut(s)	1277
Tsp45I	GTSAC	1 cut(s)	1277
TspRI	CASTG	2 cut(s)	1182, 1269
Vha464I	CTTAAG	1 cut(s)	818
XapI	RAATTY	2 cut(s)	904, 1223
XceI	RCATGY	1 cut(s)	203
XmnI	GAANNNNTTC	1 cut(s)	1158
XspI	CTAG	3 cut(s)	18, 110, 419
Zsp2I	ATGCAT	1 cut(s)	727

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.