RLG00000033106

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Forward (+)
23357184 .. 23358794
1611 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000033106

Sequence Viewer

Length: 558 bp
ATGAATCCTGAAGATATGAAAGATGTCTTCACAAGACTTGATGATTTTCGTAGGCCAGTATTAAACCCACTTTTCAAGTTGCTAGTATCGGGTCTTGCAAGCTATGAAGGTGAAAAATGGGCCAAACACGGGAGGATTATCAACCCAACATTCCATGTAGAGAAATTAAAGCAAATGTTACCCGCCTTTCACAAAAGTTGTGATGAGATGATTAAGGAATGGGAGAGCTTGGCATCCAAAGAGGGCTCATCATGTCTGTTGGATGTTTGGCCATCTCTACAACACTTGACGGCTGATGTAACAATGATTTTACTTGAAGTTCTTCGATTGTACCCAGCATTGGTTGTGATCTCTCGAACCACTCATAAGCAAACACAACTCGGGAAATTCTCACTACCAGCTGGAGTCCAAGTCGGCTTACCAACACTGCTCATTCACCGTGACAAGGAACTGTGGGGTGATGACACAAACGAGTTCAATCCTGAGAGGTTTTTAGAAGGAGTTTCTAAGGCAACAAAGAGCCAACTCTCATACTTCCCTTTTGGAGGCGGTCCCTAG

Protein Analysis

186

Amino Acids

20.99

Weight (kDa)

6.59

Isoelectric Point (pI)

38.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 2 - 102 4.8e-07 Cytochrome P450
p450 PF00067 101 - 185 2.8e-18 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000133)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G14610 AT3G14620 AT3G14630 AT3G14630 AT3G14640 AT3G14640 AT3G14650 AT3G14660 AT3G14660 AT3G14660 AT3G14680 AT3G14690 AT3G14690
fragaria_vesca FvH4_1g08410 FvH4_2g31040 FvH4_3g17200 FvH4_3g17200 FvH4_3g17220 FvH4_3g17220 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17260 FvH4_3g17260 FvH4_3g17263 FvH4_3g17264 FvH4_3g17265 FvH4_3g17266 FvH4_5g18530 FvH4_5g19690 FvH4_7g03990 FvH4_7g03990 FvH4_7g03990 FvH4_7g03990 FvH4_7g03990 FvH4_7g17900 FvH4_7g17900
malus_domestica MD02G1088200.v1.1 MD03G1224800.v1.1 MD03G1224900.v1.1 MD03G1225000.v1.1 MD11G1274100.v1.1 MD11G1274200.v1.1 MD11G1274300.v1.1 MD11G1274500.v1.1 MD11G1274600.v1.1 MD15G1050400.v1.1 MD15G1050500.v1.1 MD15G1050600.v1.1 MD15G1050700.v1.1
prunus_persica Prupe.1G404900_v2.0.a1 Prupe.1G404900_v2.0.a1 Prupe.4G152600_v2.0.a1 Prupe.4G152700_v2.0.a1 Prupe.4G152800_v2.0.a1 Prupe.4G152900_v2.0.a1 Prupe.4G153000_v2.0.a1 Prupe.7G201400_v2.0.a1 Prupe.7G201400_v2.0.a1
pyrus_communis pycom03g17310 pycom03g17330 pycom11g21520 pycom11g21600 pycom11g24180 pycom11g24190 pycom11g24200 pycom11g24210 pycom15g04890
rosa_chinensis RchiOBHm_Chr1g0327671 RchiOBHm_Chr1g0327711 RchiOBHm_Chr1g0327721 RchiOBHm_Chr2g0094501 RchiOBHm_Chr5g0028601 RchiOBHm_Chr5g0028611 RchiOBHm_Chr5g0028621 RchiOBHm_Chr5g0028661 RchiOBHm_Chr5g0028671 RchiOBHm_Chr5g0028701 RchiOBHm_Chr5g0028721 RchiOBHm_Chr5g0028741 RchiOBHm_Chr5g0028751 RchiOBHm_Chr5g0028771 RchiOBHm_Chr5g0028821 RchiOBHm_Chr6g0311761 RchiOBHm_Chr7g0204421
rosa_laevigata RLG00000003223 RLG00000003462 RLG00000010376 RLG00000012452 RLG00000016496 RLG00000018531 RLG00000018532 RLG00000018536 RLG00000029973 RLG00000029976 RLG00000033105 RLG00000033106 RLG00000033107 RLG00000033109 RLG00000033110 RLG00000033111 RLG00000033112 RLG00000033113 RLG00000033114 RLG00000033116 RLG00000033124
rosa_multiflora Rmu_co8029584.1_g000001 Rmu_co8159878.1_g000001 Rmu_co8310611.1_g000001 Rmu_sc0001000.1_g000004 Rmu_sc0001000.1_g000016 Rmu_sc0001575.1_g000020 Rmu_sc0001575.1_g000021 Rmu_sc0001575.1_g000022 Rmu_sc0001575.1_g000027 Rmu_sc0001575.1_g000035 Rmu_sc0001575.1_g000040 Rmu_sc0002888.1_g000039 Rmu_sc0003951.1_g000001 Rmu_sc0004359.1_g000045 Rmu_sc0005178.1_g000001 Rmu_sc0005178.1_g000002 Rmu_sc0005178.1_g000004 Rmu_sc0023855.1_g000001 Rmu_sc0024393.1_g000001 Rmu_sc0035326.1_g000001
rosa_roxburghii Rroxscaffold_1G00051080 Rroxscaffold_1G00051100 Rroxscaffold_1G00051110 Rroxscaffold_1G00051120 Rroxscaffold_1G00051150 Rroxscaffold_1G00051160 Rroxscaffold_1G00051170 Rroxscaffold_1G00051180 Rroxscaffold_2G00123610 Rroxscaffold_2G00147120 Rroxscaffold_3G00250540 Rroxscaffold_3G00253110 Rroxscaffold_3G00253120 Rroxscaffold_4G00322410 Rroxscaffold_4G00322440 Rroxscaffold_4G00322470 Rroxscaffold_7G00157330
rosa_rugosa Rorug01G0069500 Rorug01G0069600 Rorug01G0069700 Rorug02G0044200 Rorug02G0227700 Rorug05G0109800 Rorug05G0109900 Rorug05G0110000 Rorug05G0110100 Rorug05G0110300 Rorug05G0110400 Rorug05G0110500 Rorug07G0083800 Rorug07G0083900.1 Rorug07G0103700
rosa_samantha Rh1BG069000 Rh1BG069100 Rh1BG069200 Rh1CG084000 Rh1DG090700 Rh1DG090800 Rh1DG090900 Rh2AG092500 Rh2DG091600 Rh2DG309400 Rh5AG202100 Rh5AG202200 Rh5AG202500 Rh5AG202800 Rh5AG202900 Rh5CG220600 Rh5CG220700 Rh5CG220800 Rh5CG220900 Rh5CG221600 Rh5CG221900 Rh5CG222000 Rh5CG222100 Rh5DG203300 Rh5DG203400 Rh5DG203500 Rh5DG204100 Rh5DG204300 Rh5DG204400 Rh5DG204600 Rh6BG517600 Rh6CG523400 Rh6DG509100 Rh7AG213600 Rh7BG211400 Rh7DG220800
rosa_wichuraiana Rw0G010630 Rw1G006750 Rw1G006770 Rw5G018300 Rw5G018310 Rw5G018330 Rw6G044090 Rw7G018510 Rw7G020290

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 183, 549
AcoI YGGCCR 1 cut(s) 269
AcsI RAATTY 1 cut(s) 386
AcuI CTGAAG 1 cut(s) 30
AfaI GTAC 1 cut(s) 332
AfiI CCNNNNNNNGG 4 cut(s) 129, 340, 445, 545
AgsI TTSAA 3 cut(s) 76, 317, 478
AluBI AGCT 3 cut(s) 102, 228, 401
AluI AGCT 3 cut(s) 102, 228, 401
Ama87I CYCGRG 1 cut(s) 380
AoxI GGCC 3 cut(s) 53, 120, 269
ApoI RAATTY 1 cut(s) 386
Asp700I GAANNNNTTC 1 cut(s) 321
AspS9I GGNCC 2 cut(s) 120, 551
AsuHPI GGTGA 3 cut(s) 122, 428, 470
AvaI CYCGRG 1 cut(s) 380
AvaII GGWCC 1 cut(s) 551
BalI TGGCCA 1 cut(s) 271
BanII GRGCYC 1 cut(s) 248
BbsI GAAGAC 1 cut(s) 19
BccI CCATC 1 cut(s) 280
BceAI ACGGC 1 cut(s) 306
BfaI CTAG 2 cut(s) 83, 556
Bme18I GGWCC 1 cut(s) 551
BmeT110I CYCGRG 1 cut(s) 380
BmgT120I GGNCC 2 cut(s) 120, 551
BmiI GGNNCC 1 cut(s) 553
BmsI GCATC 1 cut(s) 242
BpiI GAAGAC 1 cut(s) 19
BpmI CTGGAG 1 cut(s) 423
BsaXI ACNNNNNCTCC 2 cut(s) 396, 426
Bsc4I CCNNNNNNNGG 4 cut(s) 129, 340, 445, 545
Bse1I ACTGG 1 cut(s) 56
BseGI GGATG 2 cut(s) 233, 268
BseLI CCNNNNNNNGG 4 cut(s) 129, 340, 445, 545
BseMII CTCAG 1 cut(s) 474
BseNI ACTGG 1 cut(s) 56
BseYI CCCAGC 1 cut(s) 334
BshFI GGCC 3 cut(s) 55, 122, 271
BsiHKCI CYCGRG 1 cut(s) 380
BslFI GGGAC 1 cut(s) 537
BslI CCNNNNNNNGG 4 cut(s) 129, 340, 445, 545
BsmFI GGGAC 1 cut(s) 537
BsnI GGCC 3 cut(s) 55, 122, 271
BsoBI CYCGRG 1 cut(s) 380
Bsp1286I GDGCHC 1 cut(s) 248
Bsp143I GATC 1 cut(s) 348
BspACI CCGC 2 cut(s) 183, 549
BspANI GGCC 3 cut(s) 55, 122, 271
BspCNI CTCAG 1 cut(s) 475
BspLI GGNNCC 1 cut(s) 553
BsrI ACTGG 1 cut(s) 56
BssMI GATC 1 cut(s) 348
Bst4CI ACNGT 2 cut(s) 440, 453
BstC8I GCNNGC 1 cut(s) 100
BstDEI CTNAG 2 cut(s) 483, 507
BstENI CCTNNNNNAGG 1 cut(s) 543
BstF5I GGATG 2 cut(s) 233, 268
BstKTI GATC 1 cut(s) 351
BstMBI GATC 1 cut(s) 348
BstV2I GAAGAC 1 cut(s) 19
BsuRI GGCC 3 cut(s) 55, 122, 271
BtsCI GGATG 2 cut(s) 233, 268
BtsI GCAGTG 1 cut(s) 425
BtsIMutI CAGTG 1 cut(s) 425
Cac8I GCNNGC 1 cut(s) 100
Cfr13I GGNCC 2 cut(s) 120, 551
Csp6I GTAC 1 cut(s) 331
CviAII CATG 2 cut(s) 155, 252
CviQI GTAC 1 cut(s) 331
DdeI CTNAG 2 cut(s) 483, 507
DpnI GATC 1 cut(s) 350
DpnII GATC 1 cut(s) 348
EaeI YGGCCR 1 cut(s) 269
Eco24I GRGCYC 1 cut(s) 248
Eco47I GGWCC 1 cut(s) 551
Eco57I CTGAAG 1 cut(s) 30
Eco88I CYCGRG 1 cut(s) 380
EcoNI CCTNNNNNAGG 1 cut(s) 543
EcoT38I GRGCYC 1 cut(s) 248
FaeI CATG 2 cut(s) 158, 255
FaiI YATR 6 cut(s) 17, 105, 156, 253, 366, 532
FaqI GGGAC 1 cut(s) 537
FatI CATG 2 cut(s) 154, 251
FauI CCCGC 1 cut(s) 190
FokI GGATG 2 cut(s) 220, 275
FriOI GRGCYC 1 cut(s) 248
FspBI CTAG 2 cut(s) 83, 556
GsaI CCCAGC 1 cut(s) 338
GsuI CTGGAG 1 cut(s) 423
HaeIII GGCC 3 cut(s) 55, 122, 271
Hin1II CATG 2 cut(s) 158, 255
HinfI GANTC 2 cut(s) 4, 405
HphI GGTGA 3 cut(s) 122, 428, 470
Hpy188III TCNNGA 4 cut(s) 8, 354, 382, 482
HpyAV CCTTC 2 cut(s) 101, 491
HpyCH4III ACNGT 2 cut(s) 440, 453
HpyCH4V TGCA 1 cut(s) 98
HpyF3I CTNAG 2 cut(s) 483, 507
Hsp92II CATG 2 cut(s) 158, 255
Kzo9I GATC 1 cut(s) 348
LpnPI CCDG 6 cut(s) 21, 69, 348, 387, 411, 495
LweI GCATC 1 cut(s) 242
MaeI CTAG 2 cut(s) 83, 556
MaeIII GTNAC 3 cut(s) 177, 298, 440
MalI GATC 1 cut(s) 350
MboI GATC 1 cut(s) 348
MboII GAAGA 3 cut(s) 19, 23, 314
MhlI GDGCHC 1 cut(s) 248
MlsI TGGCCA 1 cut(s) 271
MluCI AATT 2 cut(s) 164, 386
MluNI TGGCCA 1 cut(s) 271
MlyI GAGTC 1 cut(s) 414
MmeI TCCRAC 1 cut(s) 240
MnlI CCTC 4 cut(s) 126, 235, 480, 539
Mox20I TGGCCA 1 cut(s) 271
MroXI GAANNNNTTC 1 cut(s) 321
MscI TGGCCA 1 cut(s) 271
MseI TTAA 3 cut(s) 62, 167, 213
Msp20I TGGCCA 1 cut(s) 271
MspA1I CMGCKG 1 cut(s) 401
NdeII GATC 1 cut(s) 348
NlaIII CATG 2 cut(s) 158, 255
NlaIV GGNNCC 1 cut(s) 553
NmuCI GTSAC 1 cut(s) 440
PdmI GAANNNNTTC 1 cut(s) 321
PfeI GAWTC 1 cut(s) 4
PleI GAGTC 1 cut(s) 413
PpsI GAGTC 1 cut(s) 413
PspFI CCCAGC 1 cut(s) 334
PspN4I GGNNCC 1 cut(s) 553
PspPI GGNCC 2 cut(s) 120, 551
PvuII CAGCTG 1 cut(s) 401
RsaI GTAC 1 cut(s) 332
RsaNI GTAC 1 cut(s) 331
SaqAI TTAA 3 cut(s) 62, 167, 213
Sau3AI GATC 1 cut(s) 348
Sau96I GGNCC 2 cut(s) 120, 551
SchI GAGTC 1 cut(s) 414
SduI GDGCHC 1 cut(s) 248
SetI ASST 5 cut(s) 104, 112, 230, 403, 491
SfaNI GCATC 1 cut(s) 242
SinI GGWCC 1 cut(s) 551
Sse9I AATT 2 cut(s) 164, 386
SsiI CCGC 2 cut(s) 183, 549
SspMI CTAG 2 cut(s) 83, 556
TaaI ACNGT 2 cut(s) 440, 453
TaqI TCGA 2 cut(s) 325, 355
TasI AATT 2 cut(s) 164, 386
TfiI GAWTC 1 cut(s) 4
Tru1I TTAA 3 cut(s) 62, 167, 213
Tru9I TTAA 3 cut(s) 62, 167, 213
TscAI CASTG 1 cut(s) 432
TseFI GTSAC 1 cut(s) 440
Tsp45I GTSAC 1 cut(s) 440
TspDTI ATGAA 3 cut(s) 17, 32, 120
TspRI CASTG 1 cut(s) 432
VpaK11BI GGWCC 1 cut(s) 551
XagI CCTNNNNNAGG 1 cut(s) 543
XapI RAATTY 1 cut(s) 386
XmnI GAANNNNTTC 1 cut(s) 321
XspI CTAG 2 cut(s) 83, 556
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.