RchiOBHm_Chr5g0028741

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Forward (+)
22568340 .. 22569626
1287 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ30815

Sequence Viewer

Length: 663 bp
ATGGAGTCAAAATTCAAGGACATCCAGGGAGATGGGAAGGTTGGGATGAGTACTGGAGATGTAATTGAGGAATGTAAACTGTTTTACCTTGCTGGGCAAGAGACCACTTCAGTATTGCTGGTTTGGACAATGATATTACTTGGTCAAAATCAGAATTGGCAAGATCGAGCAAGACAAGAGGTTTTTCATGTCTTTGGAAGCAACAAGCCAGACTTTGATGGACTATCTCACCTAAAAGTAGTAACCATGATTTTATATGAAGTTCTTCGATTGTACCCACCTGTGGATTTTATCTCTCGAACCACTCACAAGAAAACACAACTCGGGAAATTCTCACTACCAGCTGGAGTCCAAGTCCATTTACCAACAGTGCTCATTCACCGTGACAAAGAACTGTGGGGTGATGATGCAAACGAGTTCAATCCTGAGAGGTTTTCGGAAGGAGTTTCCAAGGCGACAAAGAGCCAACTCTCATTTATCCCTTTCGGAGGTGGTCCTCGGATTTGCATTGGACAAAACTTTGCTATGATAGAAGCGAAGTTGGCCTTGTCATTGATCTTGCTACACTTTGACTTTGAGCTCGCTCCATCTTATGCTCATGCTCCTTCTGCACCTATGATTAGACCACAGTATGGAGCTCCTATCATTTTACAGAAGCGCTAA

Protein Analysis

220

Amino Acids

24.72

Weight (kDa)

7.06

Isoelectric Point (pI)

41.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 11 - 197 3.3e-54 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000133)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G14610 AT3G14620 AT3G14630 AT3G14630 AT3G14640 AT3G14640 AT3G14650 AT3G14660 AT3G14660 AT3G14660 AT3G14680 AT3G14690 AT3G14690
fragaria_vesca FvH4_1g08410 FvH4_2g31040 FvH4_3g17200 FvH4_3g17200 FvH4_3g17220 FvH4_3g17220 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17260 FvH4_3g17260 FvH4_3g17263 FvH4_3g17264 FvH4_3g17265 FvH4_3g17266 FvH4_5g18530 FvH4_5g19690 FvH4_7g03990 FvH4_7g03990 FvH4_7g03990 FvH4_7g03990 FvH4_7g03990 FvH4_7g17900 FvH4_7g17900
malus_domestica MD02G1088200.v1.1 MD03G1224800.v1.1 MD03G1224900.v1.1 MD03G1225000.v1.1 MD11G1274100.v1.1 MD11G1274200.v1.1 MD11G1274300.v1.1 MD11G1274500.v1.1 MD11G1274600.v1.1 MD15G1050400.v1.1 MD15G1050500.v1.1 MD15G1050600.v1.1 MD15G1050700.v1.1
prunus_persica Prupe.1G404900_v2.0.a1 Prupe.1G404900_v2.0.a1 Prupe.4G152600_v2.0.a1 Prupe.4G152700_v2.0.a1 Prupe.4G152800_v2.0.a1 Prupe.4G152900_v2.0.a1 Prupe.4G153000_v2.0.a1 Prupe.7G201400_v2.0.a1 Prupe.7G201400_v2.0.a1
pyrus_communis pycom03g17310 pycom03g17330 pycom11g21520 pycom11g21600 pycom11g24180 pycom11g24190 pycom11g24200 pycom11g24210 pycom15g04890
rosa_chinensis RchiOBHm_Chr1g0327671 RchiOBHm_Chr1g0327711 RchiOBHm_Chr1g0327721 RchiOBHm_Chr2g0094501 RchiOBHm_Chr5g0028601 RchiOBHm_Chr5g0028611 RchiOBHm_Chr5g0028621 RchiOBHm_Chr5g0028661 RchiOBHm_Chr5g0028671 RchiOBHm_Chr5g0028701 RchiOBHm_Chr5g0028721 RchiOBHm_Chr5g0028741 RchiOBHm_Chr5g0028751 RchiOBHm_Chr5g0028771 RchiOBHm_Chr5g0028821 RchiOBHm_Chr6g0311761 RchiOBHm_Chr7g0204421
rosa_laevigata RLG00000003223 RLG00000003462 RLG00000010376 RLG00000012452 RLG00000016496 RLG00000018531 RLG00000018532 RLG00000018536 RLG00000029973 RLG00000029976 RLG00000033105 RLG00000033106 RLG00000033107 RLG00000033109 RLG00000033110 RLG00000033111 RLG00000033112 RLG00000033113 RLG00000033114 RLG00000033116 RLG00000033124
rosa_multiflora Rmu_co8029584.1_g000001 Rmu_co8159878.1_g000001 Rmu_co8310611.1_g000001 Rmu_sc0001000.1_g000004 Rmu_sc0001000.1_g000016 Rmu_sc0001575.1_g000020 Rmu_sc0001575.1_g000021 Rmu_sc0001575.1_g000022 Rmu_sc0001575.1_g000027 Rmu_sc0001575.1_g000035 Rmu_sc0001575.1_g000040 Rmu_sc0002888.1_g000039 Rmu_sc0003951.1_g000001 Rmu_sc0004359.1_g000045 Rmu_sc0005178.1_g000001 Rmu_sc0005178.1_g000002 Rmu_sc0005178.1_g000004 Rmu_sc0023855.1_g000001 Rmu_sc0024393.1_g000001 Rmu_sc0035326.1_g000001
rosa_roxburghii Rroxscaffold_1G00051080 Rroxscaffold_1G00051100 Rroxscaffold_1G00051110 Rroxscaffold_1G00051120 Rroxscaffold_1G00051150 Rroxscaffold_1G00051160 Rroxscaffold_1G00051170 Rroxscaffold_1G00051180 Rroxscaffold_2G00123610 Rroxscaffold_2G00147120 Rroxscaffold_3G00250540 Rroxscaffold_3G00253110 Rroxscaffold_3G00253120 Rroxscaffold_4G00322410 Rroxscaffold_4G00322440 Rroxscaffold_4G00322470 Rroxscaffold_7G00157330
rosa_rugosa Rorug01G0069500 Rorug01G0069600 Rorug01G0069700 Rorug02G0044200 Rorug02G0227700 Rorug05G0109800 Rorug05G0109900 Rorug05G0110000 Rorug05G0110100 Rorug05G0110300 Rorug05G0110400 Rorug05G0110500 Rorug07G0083800 Rorug07G0083900.1 Rorug07G0103700
rosa_samantha Rh1BG069000 Rh1BG069100 Rh1BG069200 Rh1CG084000 Rh1DG090700 Rh1DG090800 Rh1DG090900 Rh2AG092500 Rh2DG091600 Rh2DG309400 Rh5AG202100 Rh5AG202200 Rh5AG202500 Rh5AG202800 Rh5AG202900 Rh5CG220600 Rh5CG220700 Rh5CG220800 Rh5CG220900 Rh5CG221600 Rh5CG221900 Rh5CG222000 Rh5CG222100 Rh5DG203300 Rh5DG203400 Rh5DG203500 Rh5DG204100 Rh5DG204300 Rh5DG204400 Rh5DG204600 Rh6BG517600 Rh6CG523400 Rh6DG509100 Rh7AG213600 Rh7BG211400 Rh7DG220800
rosa_wichuraiana Rw0G010630 Rw1G006750 Rw1G006770 Rw5G018300 Rw5G018310 Rw5G018330 Rw6G044090 Rw7G018510 Rw7G020290

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 632
AcsI RAATTY 2 cut(s) 11, 329
AcuI CTGAAG 1 cut(s) 93
AfaI GTAC 2 cut(s) 52, 275
AfeI AGCGCT 1 cut(s) 659
AfiI CCNNNNNNNGG 3 cut(s) 283, 488, 632
AgsI TTSAA 2 cut(s) 16, 421
AjnI CCWGG 1 cut(s) 24
AluBI AGCT 3 cut(s) 344, 580, 638
AluI AGCT 3 cut(s) 344, 580, 638
Alw21I GWGCWC 3 cut(s) 375, 582, 640
Alw26I GTCTC 1 cut(s) 95
Ama87I CYCGRG 1 cut(s) 323
Aor51HI AGCGCT 1 cut(s) 659
AoxI GGCC 1 cut(s) 543
ApoI RAATTY 2 cut(s) 11, 329
Asp700I GAANNNNTTC 1 cut(s) 264
AspLEI GCGC 1 cut(s) 660
AspS9I GGNCC 1 cut(s) 494
AsuHPI GGTGA 3 cut(s) 221, 371, 413
AvaI CYCGRG 1 cut(s) 323
AvaII GGWCC 1 cut(s) 494
BanII GRGCYC 2 cut(s) 582, 640
Bbv12I GWGCWC 3 cut(s) 375, 582, 640
BccI CCATC 3 cut(s) 26, 212, 595
BciT130I CCWGG 1 cut(s) 26
BcoDI GTCTC 1 cut(s) 95
BfoI RGCGCY 1 cut(s) 661
BmcAI AGTACT 1 cut(s) 52
Bme1390I CCNGG 1 cut(s) 26
Bme18I GGWCC 1 cut(s) 494
BmeT110I CYCGRG 1 cut(s) 323
BmgT120I GGNCC 1 cut(s) 494
BmrFI CCNGG 1 cut(s) 26
BmsI GCATC 1 cut(s) 397
BpmI CTGGAG 2 cut(s) 75, 366
BsaI GGTCTC 1 cut(s) 95
BsaJI CCNNGG 3 cut(s) 25, 450, 497
BsaXI ACNNNNNCTCC 2 cut(s) 339, 369
Bsc4I CCNNNNNNNGG 3 cut(s) 283, 488, 632
Bse1I ACTGG 1 cut(s) 58
BseBI CCWGG 1 cut(s) 26
BseDI CCNNGG 3 cut(s) 25, 450, 497
BseGI GGATG 2 cut(s) 21, 51
BseLI CCNNNNNNNGG 3 cut(s) 283, 488, 632
BseMII CTCAG 1 cut(s) 417
BseNI ACTGG 1 cut(s) 58
BseYI CCCAGC 1 cut(s) 92
BsgI GTGCAG 1 cut(s) 594
BshFI GGCC 1 cut(s) 545
BsiHKAI GWGCWC 3 cut(s) 375, 582, 640
BsiHKCI CYCGRG 1 cut(s) 323
BslI CCNNNNNNNGG 3 cut(s) 283, 488, 632
BsmAI GTCTC 1 cut(s) 95
BsnI GGCC 1 cut(s) 545
Bso31I GGTCTC 1 cut(s) 95
BsoBI CYCGRG 1 cut(s) 323
Bsp1286I GDGCHC 3 cut(s) 375, 582, 640
Bsp143I GATC 2 cut(s) 163, 555
BspANI GGCC 1 cut(s) 545
BspCNI CTCAG 1 cut(s) 418
BspTNI GGTCTC 1 cut(s) 95
BsrI ACTGG 1 cut(s) 58
BssECI CCNNGG 3 cut(s) 25, 450, 497
BssMI GATC 2 cut(s) 163, 555
BssT1I CCWWGG 1 cut(s) 450
Bst2UI CCWGG 1 cut(s) 26
Bst4CI ACNGT 5 cut(s) 81, 370, 383, 396, 630
BstC8I GCNNGC 1 cut(s) 582
BstDEI CTNAG 1 cut(s) 426
BstENI CCTNNNNNAGG 1 cut(s) 486
BstF5I GGATG 2 cut(s) 21, 51
BstH2I RGCGCY 1 cut(s) 661
BstHHI GCGC 1 cut(s) 660
BstKTI GATC 2 cut(s) 166, 558
BstMAI GTCTC 1 cut(s) 95
BstMBI GATC 2 cut(s) 163, 555
BstMWI GCNNNNNNNGC 2 cut(s) 542, 608
BstNI CCWGG 1 cut(s) 26
BstSCI CCNGG 1 cut(s) 24
BstXI CCANNNNNNTGG 1 cut(s) 32
BsuRI GGCC 1 cut(s) 545
BtsCI GGATG 2 cut(s) 21, 51
BtsIMutI CAGTG 1 cut(s) 375
Cac8I GCNNGC 1 cut(s) 582
CfoI GCGC 1 cut(s) 660
Cfr13I GGNCC 1 cut(s) 494
Csp6I GTAC 2 cut(s) 51, 274
CviAII CATG 3 cut(s) 188, 247, 599
CviJI RGCY 6 cut(s) 208, 344, 465, 545, 580, 638
CviKI_1 RGCY 6 cut(s) 208, 344, 465, 545, 580, 638
CviQI GTAC 2 cut(s) 51, 274
DdeI CTNAG 1 cut(s) 426
DpnI GATC 2 cut(s) 165, 557
DpnII GATC 2 cut(s) 163, 555
Ecl136II GAGCTC 2 cut(s) 580, 638
Eco130I CCWWGG 1 cut(s) 450
Eco24I GRGCYC 2 cut(s) 582, 640
Eco31I GGTCTC 1 cut(s) 95
Eco47I GGWCC 1 cut(s) 494
Eco47III AGCGCT 1 cut(s) 659
Eco53kI GAGCTC 2 cut(s) 580, 638
Eco57I CTGAAG 1 cut(s) 93
Eco88I CYCGRG 1 cut(s) 323
EcoICRI GAGCTC 2 cut(s) 580, 638
EcoNI CCTNNNNNAGG 1 cut(s) 486
EcoRII CCWGG 1 cut(s) 24
EcoT14I CCWWGG 1 cut(s) 450
EcoT38I GRGCYC 2 cut(s) 582, 640
ErhI CCWWGG 1 cut(s) 450
FaeI CATG 3 cut(s) 191, 250, 602
FaiI YATR 9 cut(s) 189, 248, 256, 258, 527, 594, 600, 617, 633
FalI AAGNNNNNCTT 4 cut(s) 197, 229, 530, 562
FatI CATG 3 cut(s) 187, 246, 598
FokI GGATG 2 cut(s) 8, 58
FriOI GRGCYC 2 cut(s) 582, 640
GlaI GCGC 1 cut(s) 659
GsaI CCCAGC 1 cut(s) 96
GsuI CTGGAG 2 cut(s) 75, 366
HaeII RGCGCY 1 cut(s) 661
HaeIII GGCC 1 cut(s) 545
HhaI GCGC 1 cut(s) 660
Hin1II CATG 3 cut(s) 191, 250, 602
Hin6I GCGC 1 cut(s) 658
HinP1I GCGC 1 cut(s) 658
HinfI GANTC 2 cut(s) 5, 348
HphI GGTGA 3 cut(s) 221, 371, 413
Hpy166II GTNNAC 1 cut(s) 77
Hpy188I TCNGA 4 cut(s) 153, 439, 488, 501
Hpy188III TCNNGA 3 cut(s) 297, 325, 425
Hpy8I GTNNAC 1 cut(s) 77
HpyAV CCTTC 3 cut(s) 31, 434, 615
HpyCH4III ACNGT 5 cut(s) 81, 370, 383, 396, 630
HpyCH4V TGCA 3 cut(s) 410, 507, 611
HpyF10VI GCNNNNNNNGC 2 cut(s) 542, 608
HpyF3I CTNAG 1 cut(s) 426
Hsp92II CATG 3 cut(s) 191, 250, 602
HspAI GCGC 1 cut(s) 658
Kzo9I GATC 2 cut(s) 163, 555
LmnI GCTCC 4 cut(s) 589, 607, 635, 643
LweI GCATC 1 cut(s) 397
MaeIII GTNAC 2 cut(s) 241, 383
MalI GATC 2 cut(s) 165, 557
MboI GATC 2 cut(s) 163, 555
MboII GAAGA 1 cut(s) 257
MhlI GDGCHC 3 cut(s) 375, 582, 640
MluCI AATT 4 cut(s) 11, 63, 154, 329
MlyI GAGTC 2 cut(s) 14, 357
MnlI CCTC 5 cut(s) 61, 172, 423, 482, 507
MroXI GAANNNNTTC 1 cut(s) 264
MspA1I CMGCKG 1 cut(s) 344
MspR9I CCNGG 1 cut(s) 26
MvaI CCWGG 1 cut(s) 26
MwoI GCNNNNNNNGC 2 cut(s) 542, 608
NdeII GATC 2 cut(s) 163, 555
NlaIII CATG 3 cut(s) 191, 250, 602
NmuCI GTSAC 1 cut(s) 383
PdmI GAANNNNTTC 1 cut(s) 264
PflMI CCANNNNNTGG 1 cut(s) 632
PleI GAGTC 2 cut(s) 13, 356
PpsI GAGTC 2 cut(s) 13, 356
Psp124BI GAGCTC 2 cut(s) 582, 640
Psp6I CCWGG 1 cut(s) 24
PspFI CCCAGC 1 cut(s) 92
PspGI CCWGG 1 cut(s) 24
PspPI GGNCC 1 cut(s) 494
PvuII CAGCTG 1 cut(s) 344
RsaI GTAC 2 cut(s) 52, 275
RsaNI GTAC 2 cut(s) 51, 274
SacI GAGCTC 2 cut(s) 582, 640
Sau3AI GATC 2 cut(s) 163, 555
Sau96I GGNCC 1 cut(s) 494
ScaI AGTACT 1 cut(s) 52
SchI GAGTC 2 cut(s) 14, 357
ScrFI CCNGG 1 cut(s) 26
SduI GDGCHC 3 cut(s) 375, 582, 640
SfaNI GCATC 1 cut(s) 397
SinI GGWCC 1 cut(s) 494
Sse9I AATT 4 cut(s) 11, 63, 154, 329
SstI GAGCTC 2 cut(s) 582, 640
StyD4I CCNGG 1 cut(s) 24
StyI CCWWGG 1 cut(s) 450
TaaI ACNGT 5 cut(s) 81, 370, 383, 396, 630
TaqI TCGA 3 cut(s) 166, 268, 298
TasI AATT 4 cut(s) 11, 63, 154, 329
TatI WGTACW 1 cut(s) 50
TscAI CASTG 1 cut(s) 375
TseFI GTSAC 1 cut(s) 383
Tsp45I GTSAC 1 cut(s) 383
TspDTI ATGAA 2 cut(s) 176, 273
TspRI CASTG 1 cut(s) 375
Van91I CCANNNNNTGG 1 cut(s) 632
VpaK11BI GGWCC 1 cut(s) 494
XagI CCTNNNNNAGG 1 cut(s) 486
XapI RAATTY 2 cut(s) 11, 329
XmnI GAANNNNTTC 1 cut(s) 264
ZrmI AGTACT 1 cut(s) 52
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.