Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0000133

Physical Location & Seq

Genomic Coordinates Reverse (-)

57514593 .. 57517069

Gene Structure 2477 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00123610.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1488 bp

ATGGAAGTAACAGTGGCTACCTGGGCAGCTCTGAGCCTTGTCTTTGTTAGCATAATAGCAAGATGGGTGTGGGGTGTGCTGGATTGGTTGTGGTTTAAGCCAAAGAAGTTAGAAAGATTGCTGAGAGAGCAAGGCCTTAAAGGAAACTCCTACAGGTTTATGTATGGAGACTTGAAGGAGACCGCTAACCTGCTCAAACAAGCATCATCTAAACCCATGAACCTGTCAACCTCCCATGACATAGTAGGACGAGTCACCCCTTTCGATGAGCAAACCATAAAAACTTATGGTAAGGAATCTTTTGTTTGGATTGGCACCTCACCAAGGGTGAACATAATGAATCTAGAAGATTTGAAAGCTGTCCTCACAAAAATGGATAATTTTCCAAAACCAGAATTAAGCCCACTCATTAAGTTGCTAGCACAAGGTATTGCAGCCTATGAAGGTGAGAAATGGGTTAAGCACAGAAGGATTATCAACCCTACATTCCATGTAGAGAAGCTAAAGCGTATGTTACCGGCATTCTATGAAAGTTGTGGTGATATGATCAAGGAATGGGAGAGGTCAGTGTCCAAAGGGGGTTTATCATGTGAGTTGGATGTCTTCCCTTCTCTTCAACATTTGACGGCTGATGTGATTTCTCGAACAGCATTTGGAAGTAGCTATCAAGAAGGGAGAAAATTTTTTGAACTCCTAAAAGAACAGACAGGATATGCATTAAAAGCTGCACATACTATTTACATTCCAGGATGGAGGTTTGTACCAAGTAAGATGAACAAGAGGATGAAGCAAATTGATAAAGAAATAAGGGGTTTACTCAAGGGTATTATAATTAAAAGAGAGCAGGCCATTAAGGCAGGTGAAGCCACTAAAGATGACTTATTAGGTGCACTTCTGGAGTCAAGCTTGAATGACATTCAGGGACATGGGAAGAACAACAAAAACGTTGGGATGAGTATTGAAGATGTAATTGAGGAAATTGTCAAGACCGAGCAAGACGAGATTCTGCAAGTCTTTGGAAGCAACAAGCCAGACTTTGAAGGCCTAACTCACTTGAAAGTTGTAACAATGATTTTACTTGAAGTTCTTCGACTATACCCACCACTGGTTATGATGTCTCGAATCGTTCACAAGAAAACACAACTTACAAAATTCTCATGGCCAGCTGGAGTCGAAGTCGCCTTACCTACACTGCTCATTCACCACGATAAGGAACTGTGGGGTGATGACGCAAATGAGTTCAAGCCAGAGAGGTTTTCTGAAGGAGTTTCTAAGGCAACAAAGAATCGACTCTCGTTCTTCCCATTTGGAGCCGGTCCTCGGATCTGCGTTGGACAGAACTTTGCCATGATAGAAGCCAAACAAGCCTTATCATTGATCTTGCAACACTTCACTTTTGAGCTTACGCCATCTTATACTCATGCTCCTTCCTCACTTTTCATTATTCAACCACAATATGGTGCTCCAATCATTTTACATAAGCGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004497 GO:0006082 GO:0006629 GO:0006720 GO:0006721 GO:0006722 GO:0008150 GO:0008152 GO:0008299 GO:0008300 GO:0008610 GO:0009056 GO:0009058 GO:0009987 GO:0016042 GO:0016053 GO:0016104 GO:0016105 GO:0016114 GO:0016115 GO:0016491 GO:0016705 GO:0016709 GO:0017144 GO:0019741 GO:0019742 GO:0019745 GO:0019752 GO:0032787 GO:0042180 GO:0042181 GO:0042182 GO:0043436 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044249 GO:0044255 GO:0044281 GO:0044282 GO:0044283 GO:0046394 GO:0055114 GO:0071704 GO:0072330 GO:1901360 GO:1901361 GO:1901362 GO:1901575 GO:1901576 GO:1901615 GO:1901617 GO:1902381 GO:1902382 GO:1902384 GO:1902386

KEGG Pathways

Metabolic & Signaling

ko00908 ko01100 ko01110 ko04726 map00908 map01100 map01110 map04726

Pfam Domains

Protein Families

p450

Protein Analysis

495

Amino Acids

56.27

Weight (kDa)

9.24

Isoelectric Point (pI)

40.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
p450	PF00067	91 - 326	1.7e-26	Cytochrome P450
p450	PF00067	330 - 471	1e-38	Cytochrome P450

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000133)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G14610 AT3G14620 AT3G14630 AT3G14630 AT3G14640 AT3G14640 AT3G14650 AT3G14660 AT3G14660 AT3G14660 AT3G14680 AT3G14690 AT3G14690
fragaria_vesca	FvH4_1g08410 FvH4_2g31040 FvH4_3g17200 FvH4_3g17200 FvH4_3g17220 FvH4_3g17220 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17260 FvH4_3g17260 FvH4_3g17263 FvH4_3g17264 FvH4_3g17265 FvH4_3g17266 FvH4_5g18530 FvH4_5g19690 FvH4_7g03990 FvH4_7g03990 FvH4_7g03990 FvH4_7g03990 FvH4_7g03990 FvH4_7g17900 FvH4_7g17900
malus_domestica	MD02G1088200.v1.1 MD03G1224800.v1.1 MD03G1224900.v1.1 MD03G1225000.v1.1 MD11G1274100.v1.1 MD11G1274200.v1.1 MD11G1274300.v1.1 MD11G1274500.v1.1 MD11G1274600.v1.1 MD15G1050400.v1.1 MD15G1050500.v1.1 MD15G1050600.v1.1 MD15G1050700.v1.1
prunus_persica	Prupe.1G404900_v2.0.a1 Prupe.1G404900_v2.0.a1 Prupe.4G152600_v2.0.a1 Prupe.4G152700_v2.0.a1 Prupe.4G152800_v2.0.a1 Prupe.4G152900_v2.0.a1 Prupe.4G153000_v2.0.a1 Prupe.7G201400_v2.0.a1 Prupe.7G201400_v2.0.a1
pyrus_communis	pycom03g17310 pycom03g17330 pycom11g21520 pycom11g21600 pycom11g24180 pycom11g24190 pycom11g24200 pycom11g24210 pycom15g04890
rosa_chinensis	RchiOBHm_Chr1g0327671 RchiOBHm_Chr1g0327711 RchiOBHm_Chr1g0327721 RchiOBHm_Chr2g0094501 RchiOBHm_Chr5g0028601 RchiOBHm_Chr5g0028611 RchiOBHm_Chr5g0028621 RchiOBHm_Chr5g0028661 RchiOBHm_Chr5g0028671 RchiOBHm_Chr5g0028701 RchiOBHm_Chr5g0028721 RchiOBHm_Chr5g0028741 RchiOBHm_Chr5g0028751 RchiOBHm_Chr5g0028771 RchiOBHm_Chr5g0028821 RchiOBHm_Chr6g0311761 RchiOBHm_Chr7g0204421
rosa_laevigata	RLG00000003223 RLG00000003462 RLG00000010376 RLG00000012452 RLG00000016496 RLG00000018531 RLG00000018532 RLG00000018536 RLG00000029973 RLG00000029976 RLG00000033105 RLG00000033106 RLG00000033107 RLG00000033109 RLG00000033110 RLG00000033111 RLG00000033112 RLG00000033113 RLG00000033114 RLG00000033116 RLG00000033124
rosa_multiflora	Rmu_co8029584.1_g000001 Rmu_co8159878.1_g000001 Rmu_co8310611.1_g000001 Rmu_sc0001000.1_g000004 Rmu_sc0001000.1_g000016 Rmu_sc0001575.1_g000020 Rmu_sc0001575.1_g000021 Rmu_sc0001575.1_g000022 Rmu_sc0001575.1_g000027 Rmu_sc0001575.1_g000035 Rmu_sc0001575.1_g000040 Rmu_sc0002888.1_g000039 Rmu_sc0003951.1_g000001 Rmu_sc0004359.1_g000045 Rmu_sc0005178.1_g000001 Rmu_sc0005178.1_g000002 Rmu_sc0005178.1_g000004 Rmu_sc0023855.1_g000001 Rmu_sc0024393.1_g000001 Rmu_sc0035326.1_g000001
rosa_roxburghii	Rroxscaffold_1G00051080 Rroxscaffold_1G00051100 Rroxscaffold_1G00051110 Rroxscaffold_1G00051120 Rroxscaffold_1G00051150 Rroxscaffold_1G00051160 Rroxscaffold_1G00051170 Rroxscaffold_1G00051180 Rroxscaffold_2G00123610 Rroxscaffold_2G00147120 Rroxscaffold_3G00250540 Rroxscaffold_3G00253110 Rroxscaffold_3G00253120 Rroxscaffold_4G00322410 Rroxscaffold_4G00322440 Rroxscaffold_4G00322470 Rroxscaffold_7G00157330
rosa_rugosa	Rorug01G0069500 Rorug01G0069600 Rorug01G0069700 Rorug02G0044200 Rorug02G0227700 Rorug05G0109800 Rorug05G0109900 Rorug05G0110000 Rorug05G0110100 Rorug05G0110300 Rorug05G0110400 Rorug05G0110500 Rorug07G0083800 Rorug07G0083900.1 Rorug07G0103700
rosa_samantha	Rh1BG069000 Rh1BG069100 Rh1BG069200 Rh1CG084000 Rh1DG090700 Rh1DG090800 Rh1DG090900 Rh2AG092500 Rh2DG091600 Rh2DG309400 Rh5AG202100 Rh5AG202200 Rh5AG202500 Rh5AG202800 Rh5AG202900 Rh5CG220600 Rh5CG220700 Rh5CG220800 Rh5CG220900 Rh5CG221600 Rh5CG221900 Rh5CG222000 Rh5CG222100 Rh5DG203300 Rh5DG203400 Rh5DG203500 Rh5DG204100 Rh5DG204300 Rh5DG204400 Rh5DG204600 Rh6BG517600 Rh6CG523400 Rh6DG509100 Rh7AG213600 Rh7BG211400 Rh7DG220800
rosa_wichuraiana	Rw0G010630 Rw1G006750 Rw1G006770 Rw5G018300 Rw5G018310 Rw5G018330 Rw6G044090 Rw7G018510 Rw7G020290

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	830
AarI	CACCTGC	1 cut(s)	848
Acc36I	ACCTGC	2 cut(s)	198, 848
AccB1I	GGYRCC	1 cut(s)	314
AccB7I	CCANNNNNTGG	1 cut(s)	1457
AciI	CCGC	1 cut(s)	183
AclI	AACGTT	1 cut(s)	945
AclWI	GGATC	1 cut(s)	1331
AcoI	YGGCCR	1 cut(s)	1160
AcsI	RAATTY	2 cut(s)	680, 1151
AcuI	CTGAAG	1 cut(s)	1281
AfaI	GTAC	1 cut(s)	762
AfiI	CCNNNNNNNGG	5 cut(s)	324, 1105, 1210, 1320, 1457
AjnI	CCWGG	2 cut(s)	20, 745
AluBI	AGCT	8 cut(s)	29, 359, 502, 663, 725, 906, 1166, 1402
AluI	AGCT	8 cut(s)	29, 359, 502, 663, 725, 906, 1166, 1402
Alw21I	GWGCWC	2 cut(s)	892, 1465
Alw26I	GTCTC	3 cut(s)	162, 173, 1122
Alw44I	GTGCAC	1 cut(s)	888
AlwI	GGATC	1 cut(s)	1331
AoxI	GGCC	4 cut(s)	133, 846, 1042, 1160
ApaLI	GTGCAC	1 cut(s)	888
ApeKI	GCWGC	3 cut(s)	26, 434, 725
ApoI	RAATTY	2 cut(s)	680, 1151
Asp700I	GAANNNNTTC	1 cut(s)	1086
AspS9I	GGNCC	1 cut(s)	1316
AsuHPI	GGTGA	8 cut(s)	247, 312, 340, 458, 551, 872, 1193, 1235
AsuNHI	GCTAGC	1 cut(s)	418
AvaII	GGWCC	1 cut(s)	1316
BaeGI	GKGCMC	1 cut(s)	892
BalI	TGGCCA	1 cut(s)	1162
BanI	GGYRCC	1 cut(s)	314
BarI	GAAGNNNNNNTAC	2 cut(s)	1167, 1199
BbsI	GAAGAC	1 cut(s)	595
Bbv12I	GWGCWC	2 cut(s)	892, 1465
BbvI	GCAGC	3 cut(s)	38, 446, 712
BccI	CCATC	3 cut(s)	57, 744, 1417
BceAI	ACGGC	1 cut(s)	642
BciT130I	CCWGG	2 cut(s)	22, 747
BclI	TGATCA	1 cut(s)	546
BcoDI	GTCTC	3 cut(s)	162, 173, 1122
BfaI	CTAG	2 cut(s)	344, 419
BfmI	CTRYAG	1 cut(s)	151
BfuAI	ACCTGC	2 cut(s)	198, 848
BglI	GCCNNNNNGGC	1 cut(s)	854
BisI	GCNGC	3 cut(s)	27, 435, 726
BlsI	GCNGC	3 cut(s)	28, 436, 727
Bme1390I	CCNGG	2 cut(s)	22, 747
Bme18I	GGWCC	1 cut(s)	1316
BmgT120I	GGNCC	1 cut(s)	1316
BmiI	GGNNCC	2 cut(s)	316, 1312
BmrFI	CCNGG	2 cut(s)	22, 747
BmsI	GCATC	1 cut(s)	212
BmtI	GCTAGC	1 cut(s)	422
BpiI	GAAGAC	1 cut(s)	595
BpmI	CTGGAG	2 cut(s)	917, 1188
BpuEI	CTTGAG	1 cut(s)	803
BsaI	GGTCTC	1 cut(s)	173
BsaJI	CCNNGG	3 cut(s)	21, 323, 1319
BsaXI	ACNNNNNCTCC	4 cut(s)	1161, 1191, 1408, 1438
Bsc4I	CCNNNNNNNGG	5 cut(s)	324, 1105, 1210, 1320, 1457
Bse118I	RCCGGY	2 cut(s)	517, 1313
Bse1I	ACTGG	1 cut(s)	1110
BseBI	CCWGG	2 cut(s)	22, 747
BseDI	CCNNGG	3 cut(s)	21, 323, 1319
BseGI	GGATG	4 cut(s)	604, 755, 789, 957
BseLI	CCNNNNNNNGG	5 cut(s)	324, 1105, 1210, 1320, 1457
BseMII	CTCAG	2 cut(s)	23, 113
BseNI	ACTGG	1 cut(s)	1110
BseSI	GKGCMC	1 cut(s)	892
BseXI	GCAGC	3 cut(s)	38, 446, 712
BsgI	GTGCAG	1 cut(s)	711
BshFI	GGCC	4 cut(s)	135, 848, 1044, 1162
BshNI	GGYRCC	1 cut(s)	314
BsiHKAI	GWGCWC	2 cut(s)	892, 1465
BsiSI	CCGG	2 cut(s)	518, 1314
BslFI	GGGAC	1 cut(s)	936
BslI	CCNNNNNNNGG	5 cut(s)	324, 1105, 1210, 1320, 1457
BsmAI	GTCTC	3 cut(s)	162, 173, 1122
BsmFI	GGGAC	1 cut(s)	936
BsmI	GAATGC	1 cut(s)	521
BsnI	GGCC	4 cut(s)	135, 848, 1044, 1162
Bso31I	GGTCTC	1 cut(s)	173
Bsp1286I	GDGCHC	2 cut(s)	892, 1465
Bsp143I	GATC	3 cut(s)	546, 1323, 1377
BspACI	CCGC	1 cut(s)	183
BspANI	GGCC	4 cut(s)	135, 848, 1044, 1162
BspCNI	CTCAG	2 cut(s)	24, 114
BspLI	GGNNCC	2 cut(s)	316, 1312
BspMI	ACCTGC	2 cut(s)	198, 848
BspOI	GCTAGC	1 cut(s)	422
BspPI	GGATC	1 cut(s)	1331
BspT107I	GGYRCC	1 cut(s)	314
BspTNI	GGTCTC	1 cut(s)	173
BsrFI	RCCGGY	2 cut(s)	517, 1313
BsrI	ACTGG	1 cut(s)	1110
BssAI	RCCGGY	2 cut(s)	517, 1313
BssECI	CCNNGG	3 cut(s)	21, 323, 1319
BssMI	GATC	3 cut(s)	546, 1323, 1377
BssT1I	CCWWGG	1 cut(s)	323
Bst2UI	CCWGG	2 cut(s)	22, 747
Bst4CI	ACNGT	2 cut(s)	13, 1218
Bst6I	CTCTTC	1 cut(s)	618
BstC8I	GCNNGC	3 cut(s)	420, 846, 1164
BstDEI	CTNAG	3 cut(s)	32, 122, 1272
BstENI	CCTNNNNNAGG	1 cut(s)	322
BstF5I	GGATG	4 cut(s)	604, 755, 789, 957
BstKTI	GATC	3 cut(s)	549, 1326, 1380
BstMAI	GTCTC	3 cut(s)	162, 173, 1122
BstMBI	GATC	3 cut(s)	546, 1323, 1377
BstMWI	GCNNNNNNNGC	6 cut(s)	23, 127, 722, 854, 863, 1364
BstNI	CCWGG	2 cut(s)	22, 747
BstSCI	CCNGG	2 cut(s)	20, 745
BstSFI	CTRYAG	1 cut(s)	151
BstSLI	GKGCMC	1 cut(s)	892
BstV1I	GCAGC	3 cut(s)	38, 446, 712
BstV2I	GAAGAC	1 cut(s)	595
BstX2I	RGATCY	1 cut(s)	1323
BstYI	RGATCY	1 cut(s)	1323
BsuRI	GGCC	4 cut(s)	135, 848, 1044, 1162
BtsCI	GGATG	4 cut(s)	604, 755, 789, 957
BtsI	GCAGTG	1 cut(s)	1190
BtsIMutI	CAGTG	4 cut(s)	18, 573, 1103, 1190
BveI	ACCTGC	2 cut(s)	198, 848
Cac8I	GCNNGC	3 cut(s)	420, 846, 1164
Cfr10I	RCCGGY	2 cut(s)	517, 1313
Cfr13I	GGNCC	1 cut(s)	1316
CseI	GACGC	1 cut(s)	1238
Csp6I	GTAC	1 cut(s)	761
CviAII	CATG	8 cut(s)	217, 236, 491, 588, 926, 1158, 1348, 1421
CviQI	GTAC	1 cut(s)	761
DdeI	CTNAG	3 cut(s)	32, 122, 1272
DpnI	GATC	3 cut(s)	548, 1325, 1379
DpnII	GATC	3 cut(s)	546, 1323, 1377
EaeI	YGGCCR	1 cut(s)	1160
Eam1104I	CTCTTC	1 cut(s)	618
EarI	CTCTTC	1 cut(s)	618
Eco130I	CCWWGG	1 cut(s)	323
Eco147I	AGGCCT	2 cut(s)	135, 1044
Eco31I	GGTCTC	1 cut(s)	173
Eco47I	GGWCC	1 cut(s)	1316
Eco57I	CTGAAG	1 cut(s)	1281
EcoNI	CCTNNNNNAGG	1 cut(s)	322
EcoRII	CCWGG	2 cut(s)	20, 745
EcoT14I	CCWWGG	1 cut(s)	323
EcoT22I	ATGCAT	1 cut(s)	718
ErhI	CCWWGG	1 cut(s)	323
FaeI	CATG	8 cut(s)	220, 239, 494, 591, 929, 1161, 1351, 1424
FalI	AAGNNNNNCTT	2 cut(s)	1019, 1051
FaqI	GGGAC	1 cut(s)	936
FatI	CATG	8 cut(s)	216, 235, 490, 587, 925, 1157, 1347, 1420
FbaI	TGATCA	1 cut(s)	546
Fnu4HI	GCNGC	3 cut(s)	27, 435, 726
FokI	GGATG	4 cut(s)	611, 762, 796, 964
Fsp4HI	GCNGC	3 cut(s)	27, 435, 726
FspBI	CTAG	2 cut(s)	344, 419
GluI	GCNGC	3 cut(s)	27, 435, 726
GsuI	CTGGAG	2 cut(s)	917, 1188
HaeIII	GGCC	4 cut(s)	135, 848, 1044, 1162
HapII	CCGG	2 cut(s)	518, 1314
HgaI	GACGC	1 cut(s)	1238
Hin1II	CATG	8 cut(s)	220, 239, 494, 591, 929, 1161, 1351, 1424
HincII	GTYRAC	1 cut(s)	228
HindII	GTYRAC	1 cut(s)	228
HindIII	AAGCTT	1 cut(s)	904
HinfI	GANTC	9 cut(s)	252, 296, 340, 899, 1003, 1122, 1170, 1285, 1290
HpaII	CCGG	2 cut(s)	518, 1314
HphI	GGTGA	8 cut(s)	247, 312, 340, 458, 551, 872, 1193, 1235
Hpy166II	GTNNAC	5 cut(s)	228, 331, 815, 890, 1129
Hpy188I	TCNGA	3 cut(s)	33, 1261, 1323
Hpy188III	TCNNGA	6 cut(s)	344, 642, 668, 896, 985, 1119
Hpy8I	GTNNAC	5 cut(s)	228, 331, 815, 890, 1129
HpyAV	CCTTC	8 cut(s)	169, 437, 462, 618, 665, 1034, 1256, 1437
HpyCH4III	ACNGT	2 cut(s)	13, 1218
HpyCH4IV	ACGT	1 cut(s)	945
HpyCH4V	TGCA	6 cut(s)	434, 716, 728, 890, 1009, 1384
HpyF10VI	GCNNNNNNNGC	6 cut(s)	23, 127, 722, 854, 863, 1364
HpyF3I	CTNAG	3 cut(s)	32, 122, 1272
HpySE526I	ACGT	1 cut(s)	945
Hsp92II	CATG	8 cut(s)	220, 239, 494, 591, 929, 1161, 1351, 1424
Ksp22I	TGATCA	1 cut(s)	546
Kzo9I	GATC	3 cut(s)	546, 1323, 1377
LmnI	GCTCC	3 cut(s)	1310, 1429, 1468
Lsp1109I	GCAGC	3 cut(s)	38, 446, 712
LweI	GCATC	1 cut(s)	212
MaeI	CTAG	2 cut(s)	344, 419
MaeII	ACGT	1 cut(s)	945
MaeIII	GTNAC	4 cut(s)	7, 253, 513, 1063
MalI	GATC	3 cut(s)	548, 1325, 1379
MboI	GATC	3 cut(s)	546, 1323, 1377
MboII	GAAGA	7 cut(s)	359, 595, 605, 943, 974, 1079, 1291
MflI	RGATCY	1 cut(s)	1323
MhlI	GDGCHC	2 cut(s)	892, 1465
MlsI	TGGCCA	1 cut(s)	1162
MluCI	AATT	8 cut(s)	379, 395, 680, 792, 831, 969, 978, 1151
MluNI	TGGCCA	1 cut(s)	1162
MlyI	GAGTC	4 cut(s)	261, 908, 1179, 1284
MmeI	TCCRAC	2 cut(s)	576, 1312
Mox20I	TGGCCA	1 cut(s)	1162
Mph1103I	ATGCAT	1 cut(s)	718
MroXI	GAANNNNTTC	1 cut(s)	1086
MscI	TGGCCA	1 cut(s)	1162
MseI	TTAA	9 cut(s)	96, 138, 398, 411, 459, 719, 834, 852, 1486
MslI	CAYNNNNRTG	1 cut(s)	371
Msp20I	TGGCCA	1 cut(s)	1162
MspA1I	CMGCKG	1 cut(s)	1166
MspI	CCGG	2 cut(s)	518, 1314
MspR9I	CCNGG	2 cut(s)	22, 747
Mva1269I	GAATGC	1 cut(s)	521
MvaI	CCWGG	2 cut(s)	22, 747
MwoI	GCNNNNNNNGC	6 cut(s)	23, 127, 722, 854, 863, 1364
NdeII	GATC	3 cut(s)	546, 1323, 1377
NheI	GCTAGC	1 cut(s)	418
NlaIII	CATG	8 cut(s)	220, 239, 494, 591, 929, 1161, 1351, 1424
NlaIV	GGNNCC	2 cut(s)	316, 1312
NmuCI	GTSAC	1 cut(s)	253
NsiI	ATGCAT	1 cut(s)	718
PaqCI	CACCTGC	1 cut(s)	848
PceI	AGGCCT	2 cut(s)	135, 1044
PctI	GAATGC	1 cut(s)	521
PdmI	GAANNNNTTC	1 cut(s)	1086
PfeI	GAWTC	5 cut(s)	296, 340, 1003, 1122, 1285
PflMI	CCANNNNNTGG	1 cut(s)	1457
PfoI	TCCNGGA	1 cut(s)	745
PkrI	GCNGC	3 cut(s)	28, 436, 727
PleI	GAGTC	4 cut(s)	260, 907, 1178, 1284
PpsI	GAGTC	4 cut(s)	260, 907, 1178, 1284
PsiI	TTATAA	1 cut(s)	830
Psp1406I	AACGTT	1 cut(s)	945
Psp6I	CCWGG	2 cut(s)	20, 745
PspGI	CCWGG	2 cut(s)	20, 745
PspN4I	GGNNCC	2 cut(s)	316, 1312
PspPI	GGNCC	1 cut(s)	1316
PsuI	RGATCY	1 cut(s)	1323
PvuII	CAGCTG	1 cut(s)	1166
RsaI	GTAC	1 cut(s)	762
RsaNI	GTAC	1 cut(s)	761
RseI	CAYNNNNRTG	1 cut(s)	371
SaqAI	TTAA	9 cut(s)	96, 138, 398, 411, 459, 719, 834, 852, 1486
SatI	GCNGC	3 cut(s)	27, 435, 726
Sau3AI	GATC	3 cut(s)	546, 1323, 1377
Sau96I	GGNCC	1 cut(s)	1316
SchI	GAGTC	4 cut(s)	261, 908, 1179, 1284
ScrFI	CCNGG	2 cut(s)	22, 747
SduI	GDGCHC	2 cut(s)	892, 1465
SfaNI	GCATC	1 cut(s)	212
SfcI	CTRYAG	1 cut(s)	151
SinI	GGWCC	1 cut(s)	1316
SmiMI	CAYNNNNRTG	1 cut(s)	371
SmlI	CTYRAG	1 cut(s)	818
SmoI	CTYRAG	1 cut(s)	818
Sse9I	AATT	8 cut(s)	379, 395, 680, 792, 831, 969, 978, 1151
SseBI	AGGCCT	2 cut(s)	135, 1044
SsiI	CCGC	1 cut(s)	183
SspMI	CTAG	2 cut(s)	344, 419
StuI	AGGCCT	2 cut(s)	135, 1044
StyD4I	CCNGG	2 cut(s)	20, 745
StyI	CCWWGG	1 cut(s)	323
TaaI	ACNGT	2 cut(s)	13, 1218
TaiI	ACGT	1 cut(s)	948
TaqI	TCGA	6 cut(s)	264, 643, 1090, 1120, 1173, 1288
TaqII	GACCGA	1 cut(s)	1004
TasI	AATT	8 cut(s)	379, 395, 680, 792, 831, 969, 978, 1151
TfiI	GAWTC	5 cut(s)	296, 340, 1003, 1122, 1285
Tru1I	TTAA	9 cut(s)	96, 138, 398, 411, 459, 719, 834, 852, 1486
Tru9I	TTAA	9 cut(s)	96, 138, 398, 411, 459, 719, 834, 852, 1486
TscAI	CASTG	4 cut(s)	18, 573, 1110, 1197
TseFI	GTSAC	1 cut(s)	253
TseI	GCWGC	3 cut(s)	26, 434, 725
Tsp45I	GTSAC	1 cut(s)	253
TspDTI	ATGAA	7 cut(s)	233, 353, 456, 543, 788, 800, 1429
TspRI	CASTG	4 cut(s)	18, 573, 1110, 1197
Van91I	CCANNNNNTGG	1 cut(s)	1457
VneI	GTGCAC	1 cut(s)	888
VpaK11BI	GGWCC	1 cut(s)	1316
XagI	CCTNNNNNAGG	1 cut(s)	322
XapI	RAATTY	2 cut(s)	680, 1151
XbaI	TCTAGA	1 cut(s)	343
XmnI	GAANNNNTTC	1 cut(s)	1086
XspI	CTAG	2 cut(s)	344, 419
Zsp2I	ATGCAT	1 cut(s)	718

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.