RH5DG204300

Belongs to the cytochrome P450 family

Basic Information

Type: Sequence Only
Biological Identity
rosa_samantha
Unknown
Physical Location & Seq
Reverse (-)
0 .. 0
1 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG204300.1

Sequence Viewer

Length: 1119 bp
ATGGAAGTAACACTGGCTAGTTGGGTATCGCTGAGCCTTGTTTTGGTTAGCATAATACTGAGATGGGCATGGAGTGTGCTGGATTGGGTTTGGCTGAATCCGAAGAAACTAGAAAGATGTTTGAGGGAGCAAGGCCTTCAAGGAAATTCCTACAAGTTCTTGTATGGGGATGTGGAGGAGAACTCTATCCTGCTAAAACATGCAAAATCCAAACCCATGAACCTCTCCACCTGCCATGACATAGCACCACGACTCATCCCTTTTCTCGATCAAACCGTAAAAACTTATGGTAAGAACTCTTTTGTTTGGAGTGGCCCCGTACCAACCGTGACCATTATGAATCCTGAAGATGTGAAAGATGTCTTCACAAAACTTGATGATTTTCTTAAGCCAGTTTCAAACCCACTTTTCAAGTTGCTAGCAACGGGTGTTACAAACTATGAAGGTGAAAAATGGGCTAAACACAGGAGGATCATCAACCCAACATTCCATGTAGAGAAACTAAAGCGTATGTTACCGGCATTTCACCAAAGTTGTGATCAGATGATTAAGGAGTGGGAGAGCTGGGTCTCAAAACAGGGTTCATCATGGGAGTTGGATGTCTGGCCTTCTCTTCAAAATTTAACGGCTGATGCGATTTCTCGAACAGCGTTTGGAAGTAGCTATGAAGAAGGTAGAAAAATATTTAAACTCCTAAAAGAGCAAACAGCATATACAATAAAAAGCTTGCAAAGTGTTTACATTCCAGGATGGAGGTTTCTACCAACTAAGATGAACAACAGGATGACACAAGTTGACAAAGAAATAACAGGTTTACTCAAGGGTATTATAAATAAAAGAGAGCAGGCCATTAAGGCAGGTGAAGCAACCAAAGATGACTTATTAGGTGCACTTATGGAATCAAACTTGAACGACATTCAGGAACATGGGAAGAACAACAAAGATGCTGGGATGATTCTTCGATTGTACCCAGCACTGGTTGTGCTTTCTCGAACCACTAACAAGACCATACAACTCGGGAAATTCTCACTACCAGCTGGAGTCGAAATTCAAATCAGCCCACCATCAAAGTGTGAGCTCAGCAAGACAGTAAGCTTTTACAAAGAAAGCCATGGATAA

Protein Analysis

372

Amino Acids

42.35

Weight (kDa)

9.24

Isoelectric Point (pI)

34.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 89 - 305 6.8e-27 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000133)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G14610 AT3G14620 AT3G14630 AT3G14630 AT3G14640 AT3G14640 AT3G14650 AT3G14660 AT3G14660 AT3G14660 AT3G14680 AT3G14690 AT3G14690
fragaria_vesca FvH4_1g08410 FvH4_2g31040 FvH4_3g17200 FvH4_3g17200 FvH4_3g17220 FvH4_3g17220 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17260 FvH4_3g17260 FvH4_3g17263 FvH4_3g17264 FvH4_3g17265 FvH4_3g17266 FvH4_5g18530 FvH4_5g19690 FvH4_7g03990 FvH4_7g03990 FvH4_7g03990 FvH4_7g03990 FvH4_7g03990 FvH4_7g17900 FvH4_7g17900
malus_domestica MD02G1088200.v1.1 MD03G1224800.v1.1 MD03G1224900.v1.1 MD03G1225000.v1.1 MD11G1274100.v1.1 MD11G1274200.v1.1 MD11G1274300.v1.1 MD11G1274500.v1.1 MD11G1274600.v1.1 MD15G1050400.v1.1 MD15G1050500.v1.1 MD15G1050600.v1.1 MD15G1050700.v1.1
prunus_persica Prupe.1G404900_v2.0.a1 Prupe.1G404900_v2.0.a1 Prupe.4G152600_v2.0.a1 Prupe.4G152700_v2.0.a1 Prupe.4G152800_v2.0.a1 Prupe.4G152900_v2.0.a1 Prupe.4G153000_v2.0.a1 Prupe.7G201400_v2.0.a1 Prupe.7G201400_v2.0.a1
pyrus_communis pycom03g17310 pycom03g17330 pycom11g21520 pycom11g21600 pycom11g24180 pycom11g24190 pycom11g24200 pycom11g24210 pycom15g04890
rosa_chinensis RchiOBHm_Chr1g0327671 RchiOBHm_Chr1g0327711 RchiOBHm_Chr1g0327721 RchiOBHm_Chr2g0094501 RchiOBHm_Chr5g0028601 RchiOBHm_Chr5g0028611 RchiOBHm_Chr5g0028621 RchiOBHm_Chr5g0028661 RchiOBHm_Chr5g0028671 RchiOBHm_Chr5g0028701 RchiOBHm_Chr5g0028721 RchiOBHm_Chr5g0028741 RchiOBHm_Chr5g0028751 RchiOBHm_Chr5g0028771 RchiOBHm_Chr5g0028821 RchiOBHm_Chr6g0311761 RchiOBHm_Chr7g0204421
rosa_laevigata RLG00000003223 RLG00000003462 RLG00000010376 RLG00000012452 RLG00000016496 RLG00000018531 RLG00000018532 RLG00000018536 RLG00000029973 RLG00000029976 RLG00000033105 RLG00000033106 RLG00000033107 RLG00000033109 RLG00000033110 RLG00000033111 RLG00000033112 RLG00000033113 RLG00000033114 RLG00000033116 RLG00000033124
rosa_multiflora Rmu_co8029584.1_g000001 Rmu_co8159878.1_g000001 Rmu_co8310611.1_g000001 Rmu_sc0001000.1_g000004 Rmu_sc0001000.1_g000016 Rmu_sc0001575.1_g000020 Rmu_sc0001575.1_g000021 Rmu_sc0001575.1_g000022 Rmu_sc0001575.1_g000027 Rmu_sc0001575.1_g000035 Rmu_sc0001575.1_g000040 Rmu_sc0002888.1_g000039 Rmu_sc0003951.1_g000001 Rmu_sc0004359.1_g000045 Rmu_sc0005178.1_g000001 Rmu_sc0005178.1_g000002 Rmu_sc0005178.1_g000004 Rmu_sc0023855.1_g000001 Rmu_sc0024393.1_g000001 Rmu_sc0035326.1_g000001
rosa_roxburghii Rroxscaffold_1G00051080 Rroxscaffold_1G00051100 Rroxscaffold_1G00051110 Rroxscaffold_1G00051120 Rroxscaffold_1G00051150 Rroxscaffold_1G00051160 Rroxscaffold_1G00051170 Rroxscaffold_1G00051180 Rroxscaffold_2G00123610 Rroxscaffold_2G00147120 Rroxscaffold_3G00250540 Rroxscaffold_3G00253110 Rroxscaffold_3G00253120 Rroxscaffold_4G00322410 Rroxscaffold_4G00322440 Rroxscaffold_4G00322470 Rroxscaffold_7G00157330
rosa_rugosa Rorug01G0069500 Rorug01G0069600 Rorug01G0069700 Rorug02G0044200 Rorug02G0227700 Rorug05G0109800 Rorug05G0109900 Rorug05G0110000 Rorug05G0110100 Rorug05G0110300 Rorug05G0110400 Rorug05G0110500 Rorug07G0083800 Rorug07G0083900.1 Rorug07G0103700
rosa_samantha Rh1BG069000 Rh1BG069100 Rh1BG069200 Rh1CG084000 Rh1DG090700 Rh1DG090800 Rh1DG090900 Rh2AG092500 Rh2DG091600 Rh2DG309400 Rh5AG202100 Rh5AG202200 Rh5AG202500 Rh5AG202800 Rh5AG202900 Rh5CG220600 Rh5CG220700 Rh5CG220800 Rh5CG220900 Rh5CG221600 Rh5CG221900 Rh5CG222000 Rh5CG222100 Rh5DG203300 Rh5DG203400 Rh5DG203500 Rh5DG204100 Rh5DG204300 Rh5DG204400 Rh5DG204600 Rh6BG517600 Rh6CG523400 Rh6DG509100 Rh7AG213600 Rh7BG211400 Rh7DG220800
rosa_wichuraiana Rw0G010630 Rw1G006750 Rw1G006770 Rw5G018300 Rw5G018310 Rw5G018330 Rw6G044090 Rw7G018510 Rw7G020290

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 830
AarI CACCTGC 2 cut(s) 239, 848
Acc36I ACCTGC 2 cut(s) 239, 848
AclWI GGATC 1 cut(s) 479
AcsI RAATTY 4 cut(s) 145, 619, 1022, 1047
AcuI CTGAAG 1 cut(s) 366
AfaI GTAC 2 cut(s) 321, 968
AfiI CCNNNNNNNGG 2 cut(s) 43, 976
AflII CTTAAG 1 cut(s) 386
AgsI TTSAA 6 cut(s) 140, 399, 412, 617, 910, 1052
AjnI CCWGG 1 cut(s) 745
AluBI AGCT 6 cut(s) 564, 663, 726, 1037, 1078, 1095
AluI AGCT 6 cut(s) 564, 663, 726, 1037, 1078, 1095
Alw21I GWGCWC 2 cut(s) 892, 1080
Alw26I GTCTC 1 cut(s) 574
Alw44I GTGCAC 1 cut(s) 888
AlwI GGATC 1 cut(s) 479
Ama87I CYCGRG 1 cut(s) 1016
AoxI GGCC 4 cut(s) 133, 313, 605, 846
ApaLI GTGCAC 1 cut(s) 888
ApoI RAATTY 4 cut(s) 145, 619, 1022, 1047
AspS9I GGNCC 1 cut(s) 314
AsuHPI GGTGA 3 cut(s) 458, 518, 872
AsuNHI GCTAGC 1 cut(s) 418
AvaI CYCGRG 1 cut(s) 1016
BaeGI GKGCMC 1 cut(s) 892
BanII GRGCYC 1 cut(s) 1080
BbsI GAAGAC 1 cut(s) 355
Bbv12I GWGCWC 2 cut(s) 892, 1080
BccI CCATC 3 cut(s) 57, 744, 1072
BceAI ACGGC 1 cut(s) 642
BciT130I CCWGG 1 cut(s) 747
BclI TGATCA 1 cut(s) 538
BcoDI GTCTC 1 cut(s) 574
BfaI CTAG 3 cut(s) 18, 110, 419
BfrI CTTAAG 1 cut(s) 386
BfuAI ACCTGC 2 cut(s) 239, 848
BglI GCCNNNNNGGC 1 cut(s) 854
BlpI GCTNAGC 2 cut(s) 32, 1079
Bme1390I CCNGG 1 cut(s) 747
BmeT110I CYCGRG 1 cut(s) 1016
BmgT120I GGNCC 1 cut(s) 314
BmiI GGNNCC 1 cut(s) 316
BmrFI CCNGG 1 cut(s) 747
BmsI GCATC 2 cut(s) 622, 934
BmtI GCTAGC 1 cut(s) 422
BpiI GAAGAC 1 cut(s) 355
BplI GAGNNNNNCTC 2 cut(s) 167, 199
BpmI CTGGAG 1 cut(s) 1059
Bpu1102I GCTNAGC 2 cut(s) 32, 1079
BpuEI CTTGAG 1 cut(s) 803
BsaI GGTCTC 1 cut(s) 574
BsaJI CCNNGG 1 cut(s) 1111
Bsc4I CCNNNNNNNGG 2 cut(s) 43, 976
Bse118I RCCGGY 1 cut(s) 517
Bse1I ACTGG 3 cut(s) 18, 392, 981
BseBI CCWGG 1 cut(s) 747
BseDI CCNNGG 1 cut(s) 1111
BseGI GGATG 6 cut(s) 175, 255, 604, 755, 789, 957
BseLI CCNNNNNNNGG 2 cut(s) 43, 976
BseMII CTCAG 3 cut(s) 23, 50, 1093
BseNI ACTGG 3 cut(s) 18, 392, 981
BseRI GAGGAG 1 cut(s) 191
BseSI GKGCMC 1 cut(s) 892
BseYI CCCAGC 3 cut(s) 564, 947, 970
BshFI GGCC 4 cut(s) 135, 315, 607, 848
BsiHKAI GWGCWC 2 cut(s) 892, 1080
BsiHKCI CYCGRG 1 cut(s) 1016
BsiSI CCGG 1 cut(s) 518
BslI CCNNNNNNNGG 2 cut(s) 43, 976
BsmAI GTCTC 1 cut(s) 574
BsnI GGCC 4 cut(s) 135, 315, 607, 848
Bso31I GGTCTC 1 cut(s) 574
BsoBI CYCGRG 1 cut(s) 1016
Bsp1286I GDGCHC 2 cut(s) 892, 1080
Bsp143I GATC 3 cut(s) 268, 471, 538
Bsp1720I GCTNAGC 2 cut(s) 32, 1079
Bsp19I CCATGG 1 cut(s) 1111
BspANI GGCC 4 cut(s) 135, 315, 607, 848
BspCNI CTCAG 3 cut(s) 24, 51, 1092
BspLI GGNNCC 1 cut(s) 316
BspMI ACCTGC 2 cut(s) 239, 848
BspOI GCTAGC 1 cut(s) 422
BspPI GGATC 1 cut(s) 479
BspTI CTTAAG 1 cut(s) 386
BspTNI GGTCTC 1 cut(s) 574
BsrFI RCCGGY 1 cut(s) 517
BsrI ACTGG 3 cut(s) 18, 392, 981
BssAI RCCGGY 1 cut(s) 517
BssECI CCNNGG 1 cut(s) 1111
BssMI GATC 3 cut(s) 268, 471, 538
BssT1I CCWWGG 1 cut(s) 1111
Bst2UI CCWGG 1 cut(s) 747
Bst4CI ACNGT 3 cut(s) 277, 328, 1090
Bst6I CTCTTC 1 cut(s) 618
BstAFI CTTAAG 1 cut(s) 386
BstC8I GCNNGC 3 cut(s) 420, 728, 846
BstDEI CTNAG 4 cut(s) 32, 59, 768, 1079
BstDSI CCRYGG 1 cut(s) 1111
BstF5I GGATG 6 cut(s) 175, 255, 604, 755, 789, 957
BstKTI GATC 3 cut(s) 271, 474, 541
BstMAI GTCTC 1 cut(s) 574
BstMBI GATC 3 cut(s) 268, 471, 538
BstMWI GCNNNNNNNGC 2 cut(s) 854, 863
BstNI CCWGG 1 cut(s) 747
BstNSI RCATGY 1 cut(s) 203
BstSCI CCNGG 1 cut(s) 745
BstSLI GKGCMC 1 cut(s) 892
BstV2I GAAGAC 1 cut(s) 355
BsuRI GGCC 4 cut(s) 135, 315, 607, 848
BtgI CCRYGG 1 cut(s) 1111
BtsCI GGATG 6 cut(s) 175, 255, 604, 755, 789, 957
BtsIMutI CAGTG 2 cut(s) 11, 974
BveI ACCTGC 2 cut(s) 239, 848
Cac8I GCNNGC 3 cut(s) 420, 728, 846
Cfr10I RCCGGY 1 cut(s) 517
Cfr13I GGNCC 1 cut(s) 314
Csp6I GTAC 2 cut(s) 320, 967
CviAII CATG 8 cut(s) 69, 200, 217, 236, 491, 588, 926, 1112
CviQI GTAC 2 cut(s) 320, 967
DdeI CTNAG 4 cut(s) 32, 59, 768, 1079
DpnI GATC 3 cut(s) 270, 473, 540
DpnII GATC 3 cut(s) 268, 471, 538
DraI TTTAAA 1 cut(s) 688
Eam1104I CTCTTC 1 cut(s) 618
EarI CTCTTC 1 cut(s) 618
Ecl136II GAGCTC 1 cut(s) 1078
Eco130I CCWWGG 1 cut(s) 1111
Eco147I AGGCCT 1 cut(s) 135
Eco24I GRGCYC 1 cut(s) 1080
Eco31I GGTCTC 1 cut(s) 574
Eco53kI GAGCTC 1 cut(s) 1078
Eco57I CTGAAG 1 cut(s) 366
Eco88I CYCGRG 1 cut(s) 1016
EcoICRI GAGCTC 1 cut(s) 1078
EcoRII CCWGG 1 cut(s) 745
EcoT14I CCWWGG 1 cut(s) 1111
EcoT38I GRGCYC 1 cut(s) 1080
ErhI CCWWGG 1 cut(s) 1111
FaeI CATG 8 cut(s) 72, 203, 220, 239, 494, 591, 929, 1115
FatI CATG 8 cut(s) 68, 199, 216, 235, 490, 587, 925, 1111
FbaI TGATCA 1 cut(s) 538
FokI GGATG 6 cut(s) 182, 242, 611, 762, 796, 964
FriOI GRGCYC 1 cut(s) 1080
FspBI CTAG 3 cut(s) 18, 110, 419
GsaI CCCAGC 3 cut(s) 568, 951, 974
GsuI CTGGAG 1 cut(s) 1059
HaeIII GGCC 4 cut(s) 135, 315, 607, 848
HapII CCGG 1 cut(s) 518
Hin1II CATG 8 cut(s) 72, 203, 220, 239, 494, 591, 929, 1115
HincII GTYRAC 1 cut(s) 796
HindII GTYRAC 1 cut(s) 796
HindIII AAGCTT 2 cut(s) 724, 1093
HinfI GANTC 6 cut(s) 97, 252, 340, 899, 955, 1041
HpaII CCGG 1 cut(s) 518
HphI GGTGA 3 cut(s) 458, 518, 872
Hpy166II GTNNAC 4 cut(s) 739, 796, 815, 890
Hpy188I TCNGA 2 cut(s) 102, 543
Hpy188III TCNNGA 6 cut(s) 266, 344, 642, 920, 990, 1018
Hpy8I GTNNAC 4 cut(s) 739, 796, 815, 890
HpyAV CCTTC 4 cut(s) 146, 437, 618, 665
HpyCH4III ACNGT 3 cut(s) 277, 328, 1090
HpyCH4V TGCA 3 cut(s) 203, 730, 890
HpyF10VI GCNNNNNNNGC 2 cut(s) 854, 863
HpyF3I CTNAG 4 cut(s) 32, 59, 768, 1079
Hsp92II CATG 8 cut(s) 72, 203, 220, 239, 494, 591, 929, 1115
Ksp22I TGATCA 1 cut(s) 538
Kzo9I GATC 3 cut(s) 268, 471, 538
LmnI GCTCC 1 cut(s) 127
LweI GCATC 2 cut(s) 622, 934
MaeI CTAG 3 cut(s) 18, 110, 419
MaeIII GTNAC 4 cut(s) 7, 328, 430, 513
MalI GATC 3 cut(s) 270, 473, 540
MboI GATC 3 cut(s) 268, 471, 538
MboII GAAGA 7 cut(s) 115, 355, 359, 605, 680, 943, 950
MhlI GDGCHC 2 cut(s) 892, 1080
MluCI AATT 4 cut(s) 145, 619, 1022, 1047
MlyI GAGTC 2 cut(s) 246, 1050
MmeI TCCRAC 1 cut(s) 576
MnlI CCTC 5 cut(s) 117, 169, 233, 462, 747
MseI TTAA 5 cut(s) 387, 549, 623, 687, 852
MslI CAYNNNNRTG 1 cut(s) 1069
MspA1I CMGCKG 1 cut(s) 1037
MspCI CTTAAG 1 cut(s) 386
MspI CCGG 1 cut(s) 518
MspR9I CCNGG 1 cut(s) 747
MvaI CCWGG 1 cut(s) 747
MwoI GCNNNNNNNGC 2 cut(s) 854, 863
NcoI CCATGG 1 cut(s) 1111
NdeII GATC 3 cut(s) 268, 471, 538
NheI GCTAGC 1 cut(s) 418
NlaIII CATG 8 cut(s) 72, 203, 220, 239, 494, 591, 929, 1115
NlaIV GGNNCC 1 cut(s) 316
NmuCI GTSAC 1 cut(s) 328
NspI RCATGY 1 cut(s) 203
PaqCI CACCTGC 2 cut(s) 239, 848
PceI AGGCCT 1 cut(s) 135
PcsI WCGNNNNNNNCGW 2 cut(s) 273, 632
PfeI GAWTC 4 cut(s) 97, 340, 899, 955
PfoI TCCNGGA 1 cut(s) 745
PleI GAGTC 2 cut(s) 246, 1049
PpsI GAGTC 2 cut(s) 246, 1049
PsiI TTATAA 1 cut(s) 830
Psp124BI GAGCTC 1 cut(s) 1080
Psp6I CCWGG 1 cut(s) 745
PspFI CCCAGC 3 cut(s) 564, 947, 970
PspGI CCWGG 1 cut(s) 745
PspN4I GGNNCC 1 cut(s) 316
PspPI GGNCC 1 cut(s) 314
PvuII CAGCTG 1 cut(s) 1037
RsaI GTAC 2 cut(s) 321, 968
RsaNI GTAC 2 cut(s) 320, 967
RseI CAYNNNNRTG 1 cut(s) 1069
SacI GAGCTC 1 cut(s) 1080
SaqAI TTAA 5 cut(s) 387, 549, 623, 687, 852
Sau3AI GATC 3 cut(s) 268, 471, 538
Sau96I GGNCC 1 cut(s) 314
SchI GAGTC 2 cut(s) 246, 1050
ScrFI CCNGG 1 cut(s) 747
SduI GDGCHC 2 cut(s) 892, 1080
SfaNI GCATC 2 cut(s) 622, 934
SmiMI CAYNNNNRTG 1 cut(s) 1069
SmlI CTYRAG 2 cut(s) 386, 818
SmoI CTYRAG 2 cut(s) 386, 818
Sse9I AATT 4 cut(s) 145, 619, 1022, 1047
SseBI AGGCCT 1 cut(s) 135
SspI AATATT 1 cut(s) 684
SspMI CTAG 3 cut(s) 18, 110, 419
SstI GAGCTC 1 cut(s) 1080
StuI AGGCCT 1 cut(s) 135
StyD4I CCNGG 1 cut(s) 745
StyI CCWWGG 1 cut(s) 1111
TaaI ACNGT 3 cut(s) 277, 328, 1090
TaqI TCGA 5 cut(s) 267, 643, 961, 991, 1044
TasI AATT 4 cut(s) 145, 619, 1022, 1047
TfiI GAWTC 4 cut(s) 97, 340, 899, 955
Tru1I TTAA 5 cut(s) 387, 549, 623, 687, 852
Tru9I TTAA 5 cut(s) 387, 549, 623, 687, 852
TscAI CASTG 2 cut(s) 18, 981
TseFI GTSAC 1 cut(s) 328
Tsp45I GTSAC 1 cut(s) 328
TspDTI ATGAA 6 cut(s) 233, 353, 456, 573, 681, 788
TspRI CASTG 2 cut(s) 18, 981
Vha464I CTTAAG 1 cut(s) 386
VneI GTGCAC 1 cut(s) 888
XapI RAATTY 4 cut(s) 145, 619, 1022, 1047
XceI RCATGY 1 cut(s) 203
XspI CTAG 3 cut(s) 18, 110, 419
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.