Rmu_co8310611.1_g000001

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8310611.1
Physical Location & Seq
Forward (+)
21 .. 919
899 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8310611.1_g000001.1.cds

Sequence Viewer

Length: 675 bp
atgaacaacaggatgacgcaagttgacaaagaaataacaggtttactcaagggtattataaataaaagagagcaggccattaaggcaggtgaagcaaccaaagatgacttattaggtgcacttatggaatcaaacttgaacgacattcaggaacatgggaagaacaacaaagatgctgggatgagtactgaagacgtgattggggagtgtaagctcttttactatgctgggcaagagaccacttcagtattgctggtttggacattggttttacttggtcaaaatcagatttggcaagatcgagcaagacaagaggttctgcaagtctttggaagcaacaagccagactttgatggcctaactcaccttaaagttgtaaccatgattttacttgaagttcttcgattgtacccagcattggttgtgctttctcgaaccactaacaagaccatacaactcgggaaattctcactaccagctggagtcgaagtgggcttatcaacactgctcattcaccgtgaaagggaactgtggggtgatgatgcaaacgagttcaagccagagaggttttcaaaaggagtttctaaggcaacaaacagcccattctcattcatccctttcggaggcggtcctcgaatttgcattgggcaaaactttgcgctgacagaggcaaaa

Protein Analysis

225

Amino Acids

24.99

Weight (kDa)

6.33

Isoelectric Point (pI)

31.6

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000133)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G14610 AT3G14620 AT3G14630 AT3G14630 AT3G14640 AT3G14640 AT3G14650 AT3G14660 AT3G14660 AT3G14660 AT3G14680 AT3G14690 AT3G14690
fragaria_vesca FvH4_1g08410 FvH4_2g31040 FvH4_3g17200 FvH4_3g17200 FvH4_3g17220 FvH4_3g17220 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17260 FvH4_3g17260 FvH4_3g17263 FvH4_3g17264 FvH4_3g17265 FvH4_3g17266 FvH4_5g18530 FvH4_5g19690 FvH4_7g03990 FvH4_7g03990 FvH4_7g03990 FvH4_7g03990 FvH4_7g03990 FvH4_7g17900 FvH4_7g17900
malus_domestica MD02G1088200.v1.1 MD03G1224800.v1.1 MD03G1224900.v1.1 MD03G1225000.v1.1 MD11G1274100.v1.1 MD11G1274200.v1.1 MD11G1274300.v1.1 MD11G1274500.v1.1 MD11G1274600.v1.1 MD15G1050400.v1.1 MD15G1050500.v1.1 MD15G1050600.v1.1 MD15G1050700.v1.1
prunus_persica Prupe.1G404900_v2.0.a1 Prupe.1G404900_v2.0.a1 Prupe.4G152600_v2.0.a1 Prupe.4G152700_v2.0.a1 Prupe.4G152800_v2.0.a1 Prupe.4G152900_v2.0.a1 Prupe.4G153000_v2.0.a1 Prupe.7G201400_v2.0.a1 Prupe.7G201400_v2.0.a1
pyrus_communis pycom03g17310 pycom03g17330 pycom11g21520 pycom11g21600 pycom11g24180 pycom11g24190 pycom11g24200 pycom11g24210 pycom15g04890
rosa_chinensis RchiOBHm_Chr1g0327671 RchiOBHm_Chr1g0327711 RchiOBHm_Chr1g0327721 RchiOBHm_Chr2g0094501 RchiOBHm_Chr5g0028601 RchiOBHm_Chr5g0028611 RchiOBHm_Chr5g0028621 RchiOBHm_Chr5g0028661 RchiOBHm_Chr5g0028671 RchiOBHm_Chr5g0028701 RchiOBHm_Chr5g0028721 RchiOBHm_Chr5g0028741 RchiOBHm_Chr5g0028751 RchiOBHm_Chr5g0028771 RchiOBHm_Chr5g0028821 RchiOBHm_Chr6g0311761 RchiOBHm_Chr7g0204421
rosa_laevigata RLG00000003223 RLG00000003462 RLG00000010376 RLG00000012452 RLG00000016496 RLG00000018531 RLG00000018532 RLG00000018536 RLG00000029973 RLG00000029976 RLG00000033105 RLG00000033106 RLG00000033107 RLG00000033109 RLG00000033110 RLG00000033111 RLG00000033112 RLG00000033113 RLG00000033114 RLG00000033116 RLG00000033124
rosa_multiflora Rmu_co8029584.1_g000001 Rmu_co8159878.1_g000001 Rmu_co8310611.1_g000001 Rmu_sc0001000.1_g000004 Rmu_sc0001000.1_g000016 Rmu_sc0001575.1_g000020 Rmu_sc0001575.1_g000021 Rmu_sc0001575.1_g000022 Rmu_sc0001575.1_g000027 Rmu_sc0001575.1_g000035 Rmu_sc0001575.1_g000040 Rmu_sc0002888.1_g000039 Rmu_sc0003951.1_g000001 Rmu_sc0004359.1_g000045 Rmu_sc0005178.1_g000001 Rmu_sc0005178.1_g000002 Rmu_sc0005178.1_g000004 Rmu_sc0023855.1_g000001 Rmu_sc0024393.1_g000001 Rmu_sc0035326.1_g000001
rosa_roxburghii Rroxscaffold_1G00051080 Rroxscaffold_1G00051100 Rroxscaffold_1G00051110 Rroxscaffold_1G00051120 Rroxscaffold_1G00051150 Rroxscaffold_1G00051160 Rroxscaffold_1G00051170 Rroxscaffold_1G00051180 Rroxscaffold_2G00123610 Rroxscaffold_2G00147120 Rroxscaffold_3G00250540 Rroxscaffold_3G00253110 Rroxscaffold_3G00253120 Rroxscaffold_4G00322410 Rroxscaffold_4G00322440 Rroxscaffold_4G00322470 Rroxscaffold_7G00157330
rosa_rugosa Rorug01G0069500 Rorug01G0069600 Rorug01G0069700 Rorug02G0044200 Rorug02G0227700 Rorug05G0109800 Rorug05G0109900 Rorug05G0110000 Rorug05G0110100 Rorug05G0110300 Rorug05G0110400 Rorug05G0110500 Rorug07G0083800 Rorug07G0083900.1 Rorug07G0103700
rosa_samantha Rh1BG069000 Rh1BG069100 Rh1BG069200 Rh1CG084000 Rh1DG090700 Rh1DG090800 Rh1DG090900 Rh2AG092500 Rh2DG091600 Rh2DG309400 Rh5AG202100 Rh5AG202200 Rh5AG202500 Rh5AG202800 Rh5AG202900 Rh5CG220600 Rh5CG220700 Rh5CG220800 Rh5CG220900 Rh5CG221600 Rh5CG221900 Rh5CG222000 Rh5CG222100 Rh5DG203300 Rh5DG203400 Rh5DG203500 Rh5DG204100 Rh5DG204300 Rh5DG204400 Rh5DG204600 Rh6BG517600 Rh6CG523400 Rh6DG509100 Rh7AG213600 Rh7BG211400 Rh7DG220800
rosa_wichuraiana Rw0G010630 Rw1G006750 Rw1G006770 Rw5G018300 Rw5G018310 Rw5G018330 Rw6G044090 Rw7G018510 Rw7G020290

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 59
AarI CACCTGC 1 cut(s) 77
Acc36I ACCTGC 1 cut(s) 77
AciI CCGC 1 cut(s) 627
AcsI RAATTY 2 cut(s) 464, 636
AcuI CTGAAG 2 cut(s) 210, 228
AfaI GTAC 2 cut(s) 187, 410
AfiI CCNNNNNNNGG 3 cut(s) 418, 523, 623
AgsI TTSAA 4 cut(s) 139, 395, 556, 573
AjiI CACGTC 1 cut(s) 196
AjuI GAANNNNNNNTTGG 2 cut(s) 183, 215
AluBI AGCT 2 cut(s) 214, 479
AluI AGCT 2 cut(s) 214, 479
Alw21I GWGCWC 1 cut(s) 121
Alw26I GTCTC 1 cut(s) 230
Alw44I GTGCAC 1 cut(s) 117
Ama87I CYCGRG 1 cut(s) 458
AoxI GGCC 2 cut(s) 75, 355
ApaLI GTGCAC 1 cut(s) 117
ApoI RAATTY 2 cut(s) 464, 636
Asp700I GAANNNNTTC 1 cut(s) 399
AspLEI GCGC 1 cut(s) 661
AspS9I GGNCC 1 cut(s) 629
AsuHPI GGTGA 4 cut(s) 101, 356, 506, 548
AvaI CYCGRG 1 cut(s) 458
AvaII GGWCC 1 cut(s) 629
BaeGI GKGCMC 1 cut(s) 121
BbsI GAAGAC 1 cut(s) 198
Bbv12I GWGCWC 1 cut(s) 121
BccI CCATC 1 cut(s) 347
BcoDI GTCTC 1 cut(s) 230
BfuAI ACCTGC 1 cut(s) 77
BglI GCCNNNNNGGC 1 cut(s) 83
BmcAI AGTACT 1 cut(s) 187
Bme18I GGWCC 1 cut(s) 629
BmeT110I CYCGRG 1 cut(s) 458
BmgBI CACGTC 1 cut(s) 196
BmgT120I GGNCC 1 cut(s) 629
BmsI GCATC 2 cut(s) 163, 532
BpiI GAAGAC 1 cut(s) 198
BpmI CTGGAG 1 cut(s) 501
BpuEI CTTGAG 1 cut(s) 32
BsaI GGTCTC 1 cut(s) 230
BsaXI ACNNNNNCTCC 2 cut(s) 474, 504
Bsc4I CCNNNNNNNGG 3 cut(s) 418, 523, 623
BseGI GGATG 3 cut(s) 18, 186, 612
BseLI CCNNNNNNNGG 3 cut(s) 418, 523, 623
BseSI GKGCMC 1 cut(s) 121
BseYI CCCAGC 3 cut(s) 176, 227, 412
BshFI GGCC 2 cut(s) 77, 357
BsiHKAI GWGCWC 1 cut(s) 121
BsiHKCI CYCGRG 1 cut(s) 458
BslI CCNNNNNNNGG 3 cut(s) 418, 523, 623
BsmAI GTCTC 1 cut(s) 230
BsnI GGCC 2 cut(s) 77, 357
Bso31I GGTCTC 1 cut(s) 230
BsoBI CYCGRG 1 cut(s) 458
Bsp1286I GDGCHC 1 cut(s) 121
Bsp143I GATC 1 cut(s) 298
BspACI CCGC 1 cut(s) 627
BspANI GGCC 2 cut(s) 77, 357
BspMI ACCTGC 1 cut(s) 77
BspTNI GGTCTC 1 cut(s) 230
BssMI GATC 1 cut(s) 298
Bst4CI ACNGT 2 cut(s) 518, 531
BstC8I GCNNGC 1 cut(s) 75
BstDEI CTNAG 1 cut(s) 585
BstENI CCTNNNNNAGG 1 cut(s) 621
BstF5I GGATG 3 cut(s) 18, 186, 612
BstHHI GCGC 1 cut(s) 661
BstKTI GATC 1 cut(s) 301
BstMAI GTCTC 1 cut(s) 230
BstMBI GATC 1 cut(s) 298
BstMWI GCNNNNNNNGC 2 cut(s) 83, 92
BstSLI GKGCMC 1 cut(s) 121
BstV2I GAAGAC 1 cut(s) 198
BsuRI GGCC 2 cut(s) 77, 357
BtrI CACGTC 1 cut(s) 196
BtsCI GGATG 3 cut(s) 18, 186, 612
BtsI GCAGTG 1 cut(s) 503
BtsIMutI CAGTG 1 cut(s) 503
BveI ACCTGC 1 cut(s) 77
Cac8I GCNNGC 1 cut(s) 75
CfoI GCGC 1 cut(s) 661
Cfr13I GGNCC 1 cut(s) 629
CseI GACGC 1 cut(s) 25
Csp6I GTAC 2 cut(s) 186, 409
CviAII CATG 2 cut(s) 155, 382
CviJI RGCY 8 cut(s) 77, 214, 343, 357, 479, 495, 559, 600
CviKI_1 RGCY 8 cut(s) 77, 214, 343, 357, 479, 495, 559, 600
CviQI GTAC 2 cut(s) 186, 409
DdeI CTNAG 1 cut(s) 585
DpnI GATC 1 cut(s) 300
DpnII GATC 1 cut(s) 298
Eco31I GGTCTC 1 cut(s) 230
Eco47I GGWCC 1 cut(s) 629
Eco57I CTGAAG 2 cut(s) 210, 228
Eco88I CYCGRG 1 cut(s) 458
EcoNI CCTNNNNNAGG 1 cut(s) 621
FaeI CATG 2 cut(s) 158, 385
FaiI YATR 6 cut(s) 59, 125, 156, 225, 383, 452
FalI AAGNNNNNCTT 2 cut(s) 332, 364
FatI CATG 2 cut(s) 154, 381
FokI GGATG 3 cut(s) 25, 193, 599
GlaI GCGC 1 cut(s) 660
GsaI CCCAGC 3 cut(s) 180, 231, 416
GsuI CTGGAG 1 cut(s) 501
HaeIII GGCC 2 cut(s) 77, 357
HgaI GACGC 1 cut(s) 25
HhaI GCGC 1 cut(s) 661
Hin1II CATG 2 cut(s) 158, 385
Hin6I GCGC 1 cut(s) 659
HinP1I GCGC 1 cut(s) 659
HincII GTYRAC 1 cut(s) 25
HindII GTYRAC 1 cut(s) 25
HinfI GANTC 2 cut(s) 128, 483
HphI GGTGA 4 cut(s) 101, 356, 506, 548
Hpy166II GTNNAC 3 cut(s) 25, 44, 119
Hpy188I TCNGA 2 cut(s) 288, 623
Hpy188III TCNNGA 3 cut(s) 149, 432, 460
Hpy8I GTNNAC 3 cut(s) 25, 44, 119
HpyCH4III ACNGT 2 cut(s) 518, 531
HpyCH4IV ACGT 1 cut(s) 195
HpyCH4V TGCA 4 cut(s) 119, 322, 545, 642
HpyF10VI GCNNNNNNNGC 2 cut(s) 83, 92
HpyF3I CTNAG 1 cut(s) 585
HpySE526I ACGT 1 cut(s) 195
Hsp92II CATG 2 cut(s) 158, 385
HspAI GCGC 1 cut(s) 659
Kzo9I GATC 1 cut(s) 298
LweI GCATC 2 cut(s) 163, 532
MaeII ACGT 1 cut(s) 195
MaeIII GTNAC 1 cut(s) 376
MalI GATC 1 cut(s) 300
MboI GATC 1 cut(s) 298
MboII GAAGA 3 cut(s) 172, 203, 392
MhlI GDGCHC 1 cut(s) 121
MluCI AATT 2 cut(s) 464, 636
MlyI GAGTC 1 cut(s) 492
MnlI CCTC 5 cut(s) 307, 558, 617, 642, 661
MroXI GAANNNNTTC 1 cut(s) 399
MseI TTAA 2 cut(s) 81, 369
MspA1I CMGCKG 1 cut(s) 479
MwoI GCNNNNNNNGC 2 cut(s) 83, 92
NdeII GATC 1 cut(s) 298
NlaIII CATG 2 cut(s) 158, 385
PaqCI CACCTGC 1 cut(s) 77
PdmI GAANNNNTTC 1 cut(s) 399
PfeI GAWTC 1 cut(s) 128
PleI GAGTC 1 cut(s) 491
PpsI GAGTC 1 cut(s) 491
PsiI TTATAA 1 cut(s) 59
PspFI CCCAGC 3 cut(s) 176, 227, 412
PspPI GGNCC 1 cut(s) 629
PvuII CAGCTG 1 cut(s) 479
RsaI GTAC 2 cut(s) 187, 410
RsaNI GTAC 2 cut(s) 186, 409
SaqAI TTAA 2 cut(s) 81, 369
Sau3AI GATC 1 cut(s) 298
Sau96I GGNCC 1 cut(s) 629
ScaI AGTACT 1 cut(s) 187
SchI GAGTC 1 cut(s) 492
SduI GDGCHC 1 cut(s) 121
SetI ASST 9 cut(s) 43, 91, 118, 198, 216, 318, 369, 481, 569
SfaNI GCATC 2 cut(s) 163, 532
SinI GGWCC 1 cut(s) 629
SmlI CTYRAG 1 cut(s) 47
SmoI CTYRAG 1 cut(s) 47
Sse9I AATT 2 cut(s) 464, 636
SsiI CCGC 1 cut(s) 627
TaaI ACNGT 2 cut(s) 518, 531
TaiI ACGT 1 cut(s) 198
TaqI TCGA 5 cut(s) 301, 403, 433, 486, 634
TasI AATT 2 cut(s) 464, 636
TatI WGTACW 1 cut(s) 185
TfiI GAWTC 1 cut(s) 128
Tru1I TTAA 2 cut(s) 81, 369
Tru9I TTAA 2 cut(s) 81, 369
TscAI CASTG 1 cut(s) 510
TspDTI ATGAA 2 cut(s) 17, 601
TspRI CASTG 1 cut(s) 510
VneI GTGCAC 1 cut(s) 117
VpaK11BI GGWCC 1 cut(s) 629
XagI CCTNNNNNAGG 1 cut(s) 621
XapI RAATTY 2 cut(s) 464, 636
XmnI GAANNNNTTC 1 cut(s) 399
ZrmI AGTACT 1 cut(s) 187
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.