Rorug05G0110000

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Reverse (-)
9787750 .. 9788571
822 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0110000.1

Sequence Viewer

Length: 822 bp
ATGGCACTTGAGCTAGTCCTACTCTTTGTTATGGGTATTATCTCTCTTCTTATCTTTACCAGGAGAGTACTATTCCACACTCACCGTGTTCAACACCTCCCTCCAAGCCCCTTTGCTTTTCCCATCATTGGCCATTTCCACCTCCTCAGCCCTCTCATCCACCGCTCTTTCCAATCCCTTTCGCTCCGGTTTGGCCCCATATTTTCCCTCCGCCTCGGTTCCGTCCCATGCATCGTCGTAACCTCGGCTGAGCTCGCAAAAGAGTTCCTCAAAACCCATGAACTGTCCTTCGTATCCCGCGTTCATAACACCGCCATCGAACGCATAACCTATGACTCTTCCTTAGCATTTTCGCCCTACGGAGCCTACTGGAAGTTTATCAAGAAGGTGACAGTGAATGAGCTCCTCAGCAGCCGCAGCGTCAGCAAGTTTCATTCCATTAGGGCGGATGAGTACTCTCGGCTCCTGAGGCTCTTCGCCGAGAGAGCTAAGAGTTGTCTAGCTGTGAACCTAAGCGAAGAGCTGCCGAGGCTTTGCCACAATGTGATAGGCCAGATGATGCTTGGGAAGTACTCCACTGCGGTTGCGAGCAACACAGAGCGGGCTGAGGAGGCGAGGTTGGTGGTTAGGGAGGCGACGAGGATCTTCGGAGAGTTGAACTTGTGTGATTTTAATATGGTATGCAAGAAACTGGATTTGCAGGGATTTGGAAAGAGAATCGAGGACACGCATGTCAAGTTTGATGAATTGGTGGAGAAGGTTGTTAATGAACGTGAACAACTGAGAATTAAGAATGTTAGCTTTGTGAGAGAGAAAATGTAA

Protein Analysis

273

Amino Acids

31.34

Weight (kDa)

9.53

Isoelectric Point (pI)

45.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 34 - 260 2.8e-20 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000133)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G14610 AT3G14620 AT3G14630 AT3G14630 AT3G14640 AT3G14640 AT3G14650 AT3G14660 AT3G14660 AT3G14660 AT3G14680 AT3G14690 AT3G14690
fragaria_vesca FvH4_1g08410 FvH4_2g31040 FvH4_3g17200 FvH4_3g17200 FvH4_3g17220 FvH4_3g17220 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17260 FvH4_3g17260 FvH4_3g17263 FvH4_3g17264 FvH4_3g17265 FvH4_3g17266 FvH4_5g18530 FvH4_5g19690 FvH4_7g03990 FvH4_7g03990 FvH4_7g03990 FvH4_7g03990 FvH4_7g03990 FvH4_7g17900 FvH4_7g17900
malus_domestica MD02G1088200.v1.1 MD03G1224800.v1.1 MD03G1224900.v1.1 MD03G1225000.v1.1 MD11G1274100.v1.1 MD11G1274200.v1.1 MD11G1274300.v1.1 MD11G1274500.v1.1 MD11G1274600.v1.1 MD15G1050400.v1.1 MD15G1050500.v1.1 MD15G1050600.v1.1 MD15G1050700.v1.1
prunus_persica Prupe.1G404900_v2.0.a1 Prupe.1G404900_v2.0.a1 Prupe.4G152600_v2.0.a1 Prupe.4G152700_v2.0.a1 Prupe.4G152800_v2.0.a1 Prupe.4G152900_v2.0.a1 Prupe.4G153000_v2.0.a1 Prupe.7G201400_v2.0.a1 Prupe.7G201400_v2.0.a1
pyrus_communis pycom03g17310 pycom03g17330 pycom11g21520 pycom11g21600 pycom11g24180 pycom11g24190 pycom11g24200 pycom11g24210 pycom15g04890
rosa_chinensis RchiOBHm_Chr1g0327671 RchiOBHm_Chr1g0327711 RchiOBHm_Chr1g0327721 RchiOBHm_Chr2g0094501 RchiOBHm_Chr5g0028601 RchiOBHm_Chr5g0028611 RchiOBHm_Chr5g0028621 RchiOBHm_Chr5g0028661 RchiOBHm_Chr5g0028671 RchiOBHm_Chr5g0028701 RchiOBHm_Chr5g0028721 RchiOBHm_Chr5g0028741 RchiOBHm_Chr5g0028751 RchiOBHm_Chr5g0028771 RchiOBHm_Chr5g0028821 RchiOBHm_Chr6g0311761 RchiOBHm_Chr7g0204421
rosa_laevigata RLG00000003223 RLG00000003462 RLG00000010376 RLG00000012452 RLG00000016496 RLG00000018531 RLG00000018532 RLG00000018536 RLG00000029973 RLG00000029976 RLG00000033105 RLG00000033106 RLG00000033107 RLG00000033109 RLG00000033110 RLG00000033111 RLG00000033112 RLG00000033113 RLG00000033114 RLG00000033116 RLG00000033124
rosa_multiflora Rmu_co8029584.1_g000001 Rmu_co8159878.1_g000001 Rmu_co8310611.1_g000001 Rmu_sc0001000.1_g000004 Rmu_sc0001000.1_g000016 Rmu_sc0001575.1_g000020 Rmu_sc0001575.1_g000021 Rmu_sc0001575.1_g000022 Rmu_sc0001575.1_g000027 Rmu_sc0001575.1_g000035 Rmu_sc0001575.1_g000040 Rmu_sc0002888.1_g000039 Rmu_sc0003951.1_g000001 Rmu_sc0004359.1_g000045 Rmu_sc0005178.1_g000001 Rmu_sc0005178.1_g000002 Rmu_sc0005178.1_g000004 Rmu_sc0023855.1_g000001 Rmu_sc0024393.1_g000001 Rmu_sc0035326.1_g000001
rosa_roxburghii Rroxscaffold_1G00051080 Rroxscaffold_1G00051100 Rroxscaffold_1G00051110 Rroxscaffold_1G00051120 Rroxscaffold_1G00051150 Rroxscaffold_1G00051160 Rroxscaffold_1G00051170 Rroxscaffold_1G00051180 Rroxscaffold_2G00123610 Rroxscaffold_2G00147120 Rroxscaffold_3G00250540 Rroxscaffold_3G00253110 Rroxscaffold_3G00253120 Rroxscaffold_4G00322410 Rroxscaffold_4G00322440 Rroxscaffold_4G00322470 Rroxscaffold_7G00157330
rosa_rugosa Rorug01G0069500 Rorug01G0069600 Rorug01G0069700 Rorug02G0044200 Rorug02G0227700 Rorug05G0109800 Rorug05G0109900 Rorug05G0110000 Rorug05G0110100 Rorug05G0110300 Rorug05G0110400 Rorug05G0110500 Rorug07G0083800 Rorug07G0083900.1 Rorug07G0103700
rosa_samantha Rh1BG069000 Rh1BG069100 Rh1BG069200 Rh1CG084000 Rh1DG090700 Rh1DG090800 Rh1DG090900 Rh2AG092500 Rh2DG091600 Rh2DG309400 Rh5AG202100 Rh5AG202200 Rh5AG202500 Rh5AG202800 Rh5AG202900 Rh5CG220600 Rh5CG220700 Rh5CG220800 Rh5CG220900 Rh5CG221600 Rh5CG221900 Rh5CG222000 Rh5CG222100 Rh5DG203300 Rh5DG203400 Rh5DG203500 Rh5DG204100 Rh5DG204300 Rh5DG204400 Rh5DG204600 Rh6BG517600 Rh6CG523400 Rh6DG509100 Rh7AG213600 Rh7BG211400 Rh7DG220800
rosa_wichuraiana Rw0G010630 Rw1G006750 Rw1G006770 Rw5G018300 Rw5G018310 Rw5G018330 Rw6G044090 Rw7G018510 Rw7G020290

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 731
AccBSI CCGCTC 2 cut(s) 165, 601
AccII CGCG 1 cut(s) 300
AciI CCGC 8 cut(s) 163, 211, 298, 312, 415, 446, 581, 601
AclWI GGATC 1 cut(s) 650
AcoI YGGCCR 1 cut(s) 130
AdeI CACNNNGTG 1 cut(s) 544
AfaI GTAC 3 cut(s) 69, 455, 572
AfiI CCNNNNNNNGG 1 cut(s) 128
AgsI TTSAA 2 cut(s) 92, 658
AjnI CCWGG 1 cut(s) 59
AluBI AGCT 7 cut(s) 13, 253, 403, 488, 503, 523, 801
AluI AGCT 7 cut(s) 13, 253, 403, 488, 503, 523, 801
Alw21I GWGCWC 2 cut(s) 255, 405
AlwI GGATC 1 cut(s) 650
AoxI GGCC 3 cut(s) 130, 193, 550
ApeKI GCWGC 3 cut(s) 411, 417, 523
AspS9I GGNCC 1 cut(s) 194
AsuHPI GGTGA 2 cut(s) 74, 400
AxyI CCTNAGG 1 cut(s) 467
BalI TGGCCA 1 cut(s) 132
BanII GRGCYC 2 cut(s) 255, 405
Bbv12I GWGCWC 2 cut(s) 255, 405
BbvCI CCTCAGC 3 cut(s) 146, 407, 606
BbvI GCAGC 3 cut(s) 423, 429, 510
BccI CCATC 2 cut(s) 131, 323
BciT130I CCWGG 1 cut(s) 61
BciVI GTATCC 1 cut(s) 304
BfaI CTAG 2 cut(s) 14, 500
BfuI GTATCC 1 cut(s) 304
BisI GCNGC 4 cut(s) 412, 415, 418, 524
BlpI GCTNAGC 1 cut(s) 249
BlsI GCNGC 4 cut(s) 413, 416, 419, 525
BmcAI AGTACT 3 cut(s) 69, 455, 572
Bme1390I CCNGG 1 cut(s) 61
BmgT120I GGNCC 1 cut(s) 194
BmiI GGNNCC 4 cut(s) 196, 220, 364, 464
BmrFI CCNGG 1 cut(s) 61
BmsI GCATC 2 cut(s) 240, 549
Bpu10I CCTNAGC 5 cut(s) 146, 343, 407, 512, 606
Bpu1102I GCTNAGC 1 cut(s) 249
BpuEI CTTGAG 1 cut(s) 29
BsaJI CCNNGG 3 cut(s) 214, 243, 527
BsaWI WCCGGW 1 cut(s) 186
BsaXI ACNNNNNCTCC 2 cut(s) 602, 632
Bsc4I CCNNNNNNNGG 1 cut(s) 128
Bse1I ACTGG 2 cut(s) 374, 696
Bse21I CCTNAGG 1 cut(s) 467
BseBI CCWGG 1 cut(s) 61
BseDI CCNNGG 3 cut(s) 214, 243, 527
BseGI GGATG 2 cut(s) 156, 454
BseLI CCNNNNNNNGG 1 cut(s) 128
BseMII CTCAG 6 cut(s) 160, 240, 421, 458, 597, 773
BseNI ACTGG 2 cut(s) 374, 696
BseRI GAGGAG 3 cut(s) 134, 395, 623
BseXI GCAGC 3 cut(s) 423, 429, 510
Bsh1236I CGCG 1 cut(s) 300
BshFI GGCC 3 cut(s) 132, 195, 552
BsiHKAI GWGCWC 2 cut(s) 255, 405
BsiSI CCGG 1 cut(s) 187
BslFI GGGAC 1 cut(s) 209
BslI CCNNNNNNNGG 1 cut(s) 128
BsmFI GGGAC 1 cut(s) 209
BsnI GGCC 3 cut(s) 132, 195, 552
Bsp1286I GDGCHC 2 cut(s) 255, 405
Bsp143I GATC 1 cut(s) 642
Bsp1720I GCTNAGC 1 cut(s) 249
BspACI CCGC 8 cut(s) 163, 211, 298, 312, 415, 446, 581, 601
BspANI GGCC 3 cut(s) 132, 195, 552
BspCNI CTCAG 6 cut(s) 159, 241, 420, 459, 598, 774
BspFNI CGCG 1 cut(s) 300
BspLI GGNNCC 4 cut(s) 196, 220, 364, 464
BspPI GGATC 1 cut(s) 650
BspQI GCTCTTC 2 cut(s) 479, 513
BsrBI CCGCTC 2 cut(s) 165, 601
BsrI ACTGG 2 cut(s) 374, 696
BssECI CCNNGG 3 cut(s) 214, 243, 527
BssMI GATC 1 cut(s) 642
Bst2UI CCWGG 1 cut(s) 61
Bst4CI ACNGT 3 cut(s) 86, 285, 394
Bst6I CTCTTC 4 cut(s) 51, 343, 479, 513
BstC8I GCNNGC 3 cut(s) 255, 589, 603
BstDEI CTNAG 9 cut(s) 146, 249, 343, 407, 467, 489, 512, 606, 782
BstF5I GGATG 2 cut(s) 156, 454
BstFNI CGCG 1 cut(s) 300
BstKTI GATC 1 cut(s) 645
BstMBI GATC 1 cut(s) 642
BstMWI GCNNNNNNNGC 7 cut(s) 254, 417, 423, 469, 485, 529, 611
BstNI CCWGG 1 cut(s) 61
BstNSI RCATGY 1 cut(s) 734
BstSCI CCNGG 1 cut(s) 59
BstUI CGCG 1 cut(s) 300
BstV1I GCAGC 3 cut(s) 423, 429, 510
BstX2I RGATCY 1 cut(s) 642
BstYI RGATCY 1 cut(s) 642
Bsu36I CCTNAGG 1 cut(s) 467
BsuI GTATCC 1 cut(s) 304
BsuRI GGCC 3 cut(s) 132, 195, 552
BtsCI GGATG 2 cut(s) 156, 454
BtsI GCAGTG 1 cut(s) 576
BtsIMutI CAGTG 2 cut(s) 399, 576
Cac8I GCNNGC 3 cut(s) 255, 589, 603
Cfr13I GGNCC 1 cut(s) 194
CseI GACGC 1 cut(s) 409
Csp6I GTAC 3 cut(s) 68, 454, 571
CspCI CAANNNNNGTGG 2 cut(s) 565, 600
CviAII CATG 3 cut(s) 228, 278, 731
CviQI GTAC 3 cut(s) 68, 454, 571
DdeI CTNAG 9 cut(s) 146, 249, 343, 407, 467, 489, 512, 606, 782
DpnI GATC 1 cut(s) 644
DpnII GATC 1 cut(s) 642
DraIII CACNNNGTG 1 cut(s) 544
DrdI GACNNNNNNGTC 1 cut(s) 731
DseDI GACNNNNNNGTC 1 cut(s) 731
EaeI YGGCCR 1 cut(s) 130
Eam1104I CTCTTC 4 cut(s) 51, 343, 479, 513
EarI CTCTTC 4 cut(s) 51, 343, 479, 513
EciI GGCGGA 2 cut(s) 200, 461
Ecl136II GAGCTC 2 cut(s) 253, 403
Eco24I GRGCYC 2 cut(s) 255, 405
Eco53kI GAGCTC 2 cut(s) 253, 403
Eco81I CCTNAGG 1 cut(s) 467
EcoICRI GAGCTC 2 cut(s) 253, 403
EcoRII CCWGG 1 cut(s) 59
EcoT22I ATGCAT 1 cut(s) 233
EcoT38I GRGCYC 2 cut(s) 255, 405
FaeI CATG 3 cut(s) 231, 281, 734
FaqI GGGAC 1 cut(s) 209
FatI CATG 3 cut(s) 227, 277, 730
FauI CCCGC 2 cut(s) 305, 594
Fnu4HI GCNGC 4 cut(s) 412, 415, 418, 524
FokI GGATG 2 cut(s) 143, 461
FriOI GRGCYC 2 cut(s) 255, 405
Fsp4HI GCNGC 4 cut(s) 412, 415, 418, 524
FspBI CTAG 2 cut(s) 14, 500
GluI GCNGC 4 cut(s) 412, 415, 418, 524
HaeIII GGCC 3 cut(s) 132, 195, 552
HapII CCGG 1 cut(s) 187
HgaI GACGC 1 cut(s) 409
Hin1II CATG 3 cut(s) 231, 281, 734
HinfI GANTC 2 cut(s) 335, 717
HpaII CCGG 1 cut(s) 187
HphI GGTGA 2 cut(s) 74, 400
Hpy166II GTNNAC 2 cut(s) 508, 776
Hpy188I TCNGA 1 cut(s) 650
Hpy188III TCNNGA 2 cut(s) 382, 466
Hpy8I GTNNAC 2 cut(s) 508, 776
Hpy99I CGWCG 2 cut(s) 239, 640
HpyAV CCTTC 3 cut(s) 298, 379, 751
HpyCH4III ACNGT 3 cut(s) 86, 285, 394
HpyCH4IV ACGT 1 cut(s) 772
HpyCH4V TGCA 3 cut(s) 231, 684, 700
HpyF10VI GCNNNNNNNGC 7 cut(s) 254, 417, 423, 469, 485, 529, 611
HpyF3I CTNAG 9 cut(s) 146, 249, 343, 407, 467, 489, 512, 606, 782
HpySE526I ACGT 1 cut(s) 772
Hsp92II CATG 3 cut(s) 231, 281, 734
Kzo9I GATC 1 cut(s) 642
LguI GCTCTTC 2 cut(s) 479, 513
LmnI GCTCC 4 cut(s) 189, 362, 408, 468
LpnPI CCDG 8 cut(s) 46, 73, 200, 355, 479, 566, 677, 686
Lsp1109I GCAGC 3 cut(s) 423, 429, 510
LweI GCATC 2 cut(s) 240, 549
MaeI CTAG 2 cut(s) 14, 500
MaeII ACGT 1 cut(s) 772
MaeIII GTNAC 2 cut(s) 238, 388
MalI GATC 1 cut(s) 644
MbiI CCGCTC 2 cut(s) 165, 601
MboI GATC 1 cut(s) 642
MboII GAAGA 5 cut(s) 38, 330, 466, 530, 637
MflI RGATCY 1 cut(s) 642
MhlI GDGCHC 2 cut(s) 255, 405
MlsI TGGCCA 1 cut(s) 132
MluCI AATT 2 cut(s) 746, 786
MluNI TGGCCA 1 cut(s) 132
MlyI GAGTC 1 cut(s) 329
Mox20I TGGCCA 1 cut(s) 132
Mph1103I ATGCAT 1 cut(s) 233
MscI TGGCCA 1 cut(s) 132
MseI TTAA 3 cut(s) 672, 765, 789
Msp20I TGGCCA 1 cut(s) 132
MspI CCGG 1 cut(s) 187
MspR9I CCNGG 1 cut(s) 61
MvaI CCWGG 1 cut(s) 61
MvnI CGCG 1 cut(s) 300
MwoI GCNNNNNNNGC 7 cut(s) 254, 417, 423, 469, 485, 529, 611
NdeII GATC 1 cut(s) 642
NlaIII CATG 3 cut(s) 231, 281, 734
NlaIV GGNNCC 4 cut(s) 196, 220, 364, 464
NmeAIII GCCGAG 4 cut(s) 224, 439, 505, 552
NmuCI GTSAC 1 cut(s) 388
NsiI ATGCAT 1 cut(s) 233
NspI RCATGY 1 cut(s) 734
PciSI GCTCTTC 2 cut(s) 479, 513
PcsI WCGNNNNNNNCGW 1 cut(s) 297
PfeI GAWTC 1 cut(s) 717
PkrI GCNGC 4 cut(s) 413, 416, 419, 525
PleI GAGTC 1 cut(s) 329
PpsI GAGTC 1 cut(s) 329
Psp124BI GAGCTC 2 cut(s) 255, 405
Psp6I CCWGG 1 cut(s) 59
PspGI CCWGG 1 cut(s) 59
PspN4I GGNNCC 4 cut(s) 196, 220, 364, 464
PspPI GGNCC 1 cut(s) 194
PsrI GAACNNNNNNTAC 2 cut(s) 285, 317
PsuI RGATCY 1 cut(s) 642
RsaI GTAC 3 cut(s) 69, 455, 572
RsaNI GTAC 3 cut(s) 68, 454, 571
SacI GAGCTC 2 cut(s) 255, 405
SapI GCTCTTC 2 cut(s) 479, 513
SaqAI TTAA 3 cut(s) 672, 765, 789
SatI GCNGC 4 cut(s) 412, 415, 418, 524
Sau3AI GATC 1 cut(s) 642
Sau96I GGNCC 1 cut(s) 194
ScaI AGTACT 3 cut(s) 69, 455, 572
SchI GAGTC 1 cut(s) 329
ScrFI CCNGG 1 cut(s) 61
SduI GDGCHC 2 cut(s) 255, 405
SfaNI GCATC 2 cut(s) 240, 549
SmlI CTYRAG 1 cut(s) 8
SmoI CTYRAG 1 cut(s) 8
Sse9I AATT 2 cut(s) 746, 786
SsiI CCGC 8 cut(s) 163, 211, 298, 312, 415, 446, 581, 601
SspMI CTAG 2 cut(s) 14, 500
SstI GAGCTC 2 cut(s) 255, 405
StyD4I CCNGG 1 cut(s) 59
TaaI ACNGT 3 cut(s) 86, 285, 394
TaiI ACGT 1 cut(s) 775
TaqI TCGA 2 cut(s) 318, 720
TasI AATT 2 cut(s) 746, 786
TatI WGTACW 3 cut(s) 67, 453, 570
TauI GCSGC 1 cut(s) 417
TfiI GAWTC 1 cut(s) 717
Tru1I TTAA 3 cut(s) 672, 765, 789
Tru9I TTAA 3 cut(s) 672, 765, 789
TscAI CASTG 2 cut(s) 399, 583
TseFI GTSAC 1 cut(s) 388
TseI GCWGC 3 cut(s) 411, 417, 523
Tsp45I GTSAC 1 cut(s) 388
TspDTI ATGAA 5 cut(s) 293, 294, 422, 759, 783
TspGWI ACGGA 2 cut(s) 211, 375
TspRI CASTG 2 cut(s) 399, 583
XceI RCATGY 1 cut(s) 734
XcmI CCANNNNNNNNNTGG 1 cut(s) 560
XspI CTAG 2 cut(s) 14, 500
ZrmI AGTACT 3 cut(s) 69, 455, 572
Zsp2I ATGCAT 1 cut(s) 233
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.