Rorug02G0227700

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Forward (+)
22492557 .. 22493144
588 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0227700.1

Sequence Viewer

Length: 588 bp
ATGAATCCCGCATCAATGGCTGGGTGGATTTCAAATAACGCAAAGATGAATCTTAAAGCTGTGGATGGGAATGAAATATTTCAGGGTCTATCCAAGTCTGCTGGTTTGGACCTTATACAGAATTGTGATCTTCCTCCACCCATGAAAGTCTTCACAGGTTCTGCAGACAAGACTGTTGTGTCATCCATGAACAGAATTTGCAGCATGATGGCCCGAGAAGATCACGAAAACAGCCACGAGTTAATCGACATGTATAGAGGAGACGGCGATCAGAATTATGGGAAGCTGGAGCTCTTGAAAGCCTTGAGGCTTTCGCAAACAAGAGCGAGGGAGGCAGAGAAGAAGGCTGAGAAGTTGGCAAAGGAAAAGGAATGTCTTTCCAATGCTCTGCTCGCTGAGGCGAAAGAGCTTTTTGCTTACCGGCAATGGGTGAGGTTGCTTGAGCTAAAAGTTTCGAAGCTGCATTCACAATTTGCAGAACAAGAACATCAGGAATGCTGTGGCTGTGAGACTTGGATTGTAGCTTTGGCACTTTGTTTGGGGATTGCTGGTGTTGGGTTTGCATTTGGCAGCAGATACTTGTATTGA

Protein Analysis

195

Amino Acids

21.75

Weight (kDa)

6.44

Isoelectric Point (pI)

23.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000133)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G14610 AT3G14620 AT3G14630 AT3G14630 AT3G14640 AT3G14640 AT3G14650 AT3G14660 AT3G14660 AT3G14660 AT3G14680 AT3G14690 AT3G14690
fragaria_vesca FvH4_1g08410 FvH4_2g31040 FvH4_3g17200 FvH4_3g17200 FvH4_3g17220 FvH4_3g17220 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17260 FvH4_3g17260 FvH4_3g17263 FvH4_3g17264 FvH4_3g17265 FvH4_3g17266 FvH4_5g18530 FvH4_5g19690 FvH4_7g03990 FvH4_7g03990 FvH4_7g03990 FvH4_7g03990 FvH4_7g03990 FvH4_7g17900 FvH4_7g17900
malus_domestica MD02G1088200.v1.1 MD03G1224800.v1.1 MD03G1224900.v1.1 MD03G1225000.v1.1 MD11G1274100.v1.1 MD11G1274200.v1.1 MD11G1274300.v1.1 MD11G1274500.v1.1 MD11G1274600.v1.1 MD15G1050400.v1.1 MD15G1050500.v1.1 MD15G1050600.v1.1 MD15G1050700.v1.1
prunus_persica Prupe.1G404900_v2.0.a1 Prupe.1G404900_v2.0.a1 Prupe.4G152600_v2.0.a1 Prupe.4G152700_v2.0.a1 Prupe.4G152800_v2.0.a1 Prupe.4G152900_v2.0.a1 Prupe.4G153000_v2.0.a1 Prupe.7G201400_v2.0.a1 Prupe.7G201400_v2.0.a1
pyrus_communis pycom03g17310 pycom03g17330 pycom11g21520 pycom11g21600 pycom11g24180 pycom11g24190 pycom11g24200 pycom11g24210 pycom15g04890
rosa_chinensis RchiOBHm_Chr1g0327671 RchiOBHm_Chr1g0327711 RchiOBHm_Chr1g0327721 RchiOBHm_Chr2g0094501 RchiOBHm_Chr5g0028601 RchiOBHm_Chr5g0028611 RchiOBHm_Chr5g0028621 RchiOBHm_Chr5g0028661 RchiOBHm_Chr5g0028671 RchiOBHm_Chr5g0028701 RchiOBHm_Chr5g0028721 RchiOBHm_Chr5g0028741 RchiOBHm_Chr5g0028751 RchiOBHm_Chr5g0028771 RchiOBHm_Chr5g0028821 RchiOBHm_Chr6g0311761 RchiOBHm_Chr7g0204421
rosa_laevigata RLG00000003223 RLG00000003462 RLG00000010376 RLG00000012452 RLG00000016496 RLG00000018531 RLG00000018532 RLG00000018536 RLG00000029973 RLG00000029976 RLG00000033105 RLG00000033106 RLG00000033107 RLG00000033109 RLG00000033110 RLG00000033111 RLG00000033112 RLG00000033113 RLG00000033114 RLG00000033116 RLG00000033124
rosa_multiflora Rmu_co8029584.1_g000001 Rmu_co8159878.1_g000001 Rmu_co8310611.1_g000001 Rmu_sc0001000.1_g000004 Rmu_sc0001000.1_g000016 Rmu_sc0001575.1_g000020 Rmu_sc0001575.1_g000021 Rmu_sc0001575.1_g000022 Rmu_sc0001575.1_g000027 Rmu_sc0001575.1_g000035 Rmu_sc0001575.1_g000040 Rmu_sc0002888.1_g000039 Rmu_sc0003951.1_g000001 Rmu_sc0004359.1_g000045 Rmu_sc0005178.1_g000001 Rmu_sc0005178.1_g000002 Rmu_sc0005178.1_g000004 Rmu_sc0023855.1_g000001 Rmu_sc0024393.1_g000001 Rmu_sc0035326.1_g000001
rosa_roxburghii Rroxscaffold_1G00051080 Rroxscaffold_1G00051100 Rroxscaffold_1G00051110 Rroxscaffold_1G00051120 Rroxscaffold_1G00051150 Rroxscaffold_1G00051160 Rroxscaffold_1G00051170 Rroxscaffold_1G00051180 Rroxscaffold_2G00123610 Rroxscaffold_2G00147120 Rroxscaffold_3G00250540 Rroxscaffold_3G00253110 Rroxscaffold_3G00253120 Rroxscaffold_4G00322410 Rroxscaffold_4G00322440 Rroxscaffold_4G00322470 Rroxscaffold_7G00157330
rosa_rugosa Rorug01G0069500 Rorug01G0069600 Rorug01G0069700 Rorug02G0044200 Rorug02G0227700 Rorug05G0109800 Rorug05G0109900 Rorug05G0110000 Rorug05G0110100 Rorug05G0110300 Rorug05G0110400 Rorug05G0110500 Rorug07G0083800 Rorug07G0083900.1 Rorug07G0103700
rosa_samantha Rh1BG069000 Rh1BG069100 Rh1BG069200 Rh1CG084000 Rh1DG090700 Rh1DG090800 Rh1DG090900 Rh2AG092500 Rh2DG091600 Rh2DG309400 Rh5AG202100 Rh5AG202200 Rh5AG202500 Rh5AG202800 Rh5AG202900 Rh5CG220600 Rh5CG220700 Rh5CG220800 Rh5CG220900 Rh5CG221600 Rh5CG221900 Rh5CG222000 Rh5CG222100 Rh5DG203300 Rh5DG203400 Rh5DG203500 Rh5DG204100 Rh5DG204300 Rh5DG204400 Rh5DG204600 Rh6BG517600 Rh6CG523400 Rh6DG509100 Rh7AG213600 Rh7BG211400 Rh7DG220800
rosa_wichuraiana Rw0G010630 Rw1G006750 Rw1G006770 Rw5G018300 Rw5G018310 Rw5G018330 Rw6G044090 Rw7G018510 Rw7G020290

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 178
AciI CCGC 1 cut(s) 9
AcsI RAATTY 1 cut(s) 195
AfiI CCNNNNNNNGG 1 cut(s) 427
AflIII ACRYGT 1 cut(s) 249
AgsI TTSAA 2 cut(s) 33, 298
AluBI AGCT 7 cut(s) 59, 286, 292, 409, 445, 460, 524
AluI AGCT 7 cut(s) 59, 286, 292, 409, 445, 460, 524
Alw21I GWGCWC 1 cut(s) 294
Alw26I GTCTC 2 cut(s) 255, 503
AlwNI CAGNNNCTG 1 cut(s) 161
Ama87I CYCGRG 1 cut(s) 213
AoxI GGCC 1 cut(s) 210
ApeKI GCWGC 3 cut(s) 201, 460, 570
ApoI RAATTY 1 cut(s) 195
Asp700I GAANNNNTTC 2 cut(s) 78, 149
AspS9I GGNCC 2 cut(s) 109, 211
AsuHPI GGTGA 1 cut(s) 442
AsuII TTCGAA 1 cut(s) 455
AvaI CYCGRG 1 cut(s) 213
AvaII GGWCC 1 cut(s) 109
BanII GRGCYC 1 cut(s) 294
BauI CACGAG 1 cut(s) 236
BbsI GAAGAC 1 cut(s) 142
Bbv12I GWGCWC 1 cut(s) 294
BbvCI CCTCAGC 1 cut(s) 396
BbvI GCAGC 3 cut(s) 213, 447, 582
BccI CCATC 2 cut(s) 59, 202
BceAI ACGGC 1 cut(s) 280
BcoDI GTCTC 2 cut(s) 255, 503
BfmI CTRYAG 1 cut(s) 162
BisI GCNGC 3 cut(s) 202, 461, 571
BlsI GCNGC 3 cut(s) 203, 462, 572
Bme18I GGWCC 1 cut(s) 109
BmeT110I CYCGRG 1 cut(s) 213
BmgT120I GGNCC 2 cut(s) 109, 211
BmsI GCATC 1 cut(s) 20
BpiI GAAGAC 1 cut(s) 142
BpmI CTGGAG 1 cut(s) 308
Bpu10I CCTNAGC 1 cut(s) 396
Bpu14I TTCGAA 1 cut(s) 455
BpuEI CTTGAG 2 cut(s) 325, 461
Bsc4I CCNNNNNNNGG 1 cut(s) 427
Bse118I RCCGGY 1 cut(s) 420
Bse3DI GCAATG 1 cut(s) 431
BseGI GGATG 2 cut(s) 70, 182
BseLI CCNNNNNNNGG 1 cut(s) 427
BseMI GCAATG 1 cut(s) 431
BseMII CTCAG 2 cut(s) 339, 387
BseRI GAGGAG 1 cut(s) 273
BseXI GCAGC 3 cut(s) 213, 447, 582
BseYI CCCAGC 1 cut(s) 20
BshFI GGCC 1 cut(s) 212
BsiHKAI GWGCWC 1 cut(s) 294
BsiHKCI CYCGRG 1 cut(s) 213
BsiSI CCGG 1 cut(s) 421
BslI CCNNNNNNNGG 1 cut(s) 427
BsmAI GTCTC 2 cut(s) 255, 503
BsmBI CGTCTC 1 cut(s) 255
BsmI GAATGC 2 cut(s) 463, 500
BsnI GGCC 1 cut(s) 212
BsoBI CYCGRG 1 cut(s) 213
Bsp119I TTCGAA 1 cut(s) 455
Bsp1286I GDGCHC 1 cut(s) 294
Bsp143I GATC 3 cut(s) 127, 220, 268
BspACI CCGC 1 cut(s) 9
BspANI GGCC 1 cut(s) 212
BspCNI CTCAG 2 cut(s) 340, 388
BspMAI CTGCAG 1 cut(s) 166
BspT104I TTCGAA 1 cut(s) 455
BsrDI GCAATG 1 cut(s) 431
BsrFI RCCGGY 1 cut(s) 420
BssAI RCCGGY 1 cut(s) 420
BssMI GATC 3 cut(s) 127, 220, 268
BssSI CACGAG 1 cut(s) 236
Bst2BI CACGAG 1 cut(s) 236
Bst4CI ACNGT 1 cut(s) 175
BstBI TTCGAA 1 cut(s) 455
BstC8I GCNNGC 1 cut(s) 393
BstDEI CTNAG 2 cut(s) 348, 396
BstF5I GGATG 2 cut(s) 70, 182
BstKTI GATC 3 cut(s) 130, 223, 271
BstMAI GTCTC 2 cut(s) 255, 503
BstMBI GATC 3 cut(s) 127, 220, 268
BstMWI GCNNNNNNNGC 3 cut(s) 17, 332, 392
BstNSI RCATGY 1 cut(s) 253
BstSFI CTRYAG 1 cut(s) 162
BstV1I GCAGC 3 cut(s) 213, 447, 582
BstV2I GAAGAC 1 cut(s) 142
BsuRI GGCC 1 cut(s) 212
BtsCI GGATG 2 cut(s) 70, 182
Cac8I GCNNGC 1 cut(s) 393
CaiI CAGNNNCTG 1 cut(s) 161
Cfr10I RCCGGY 1 cut(s) 420
Cfr13I GGNCC 2 cut(s) 109, 211
CviAII CATG 4 cut(s) 142, 187, 205, 250
DdeI CTNAG 2 cut(s) 348, 396
DpnI GATC 3 cut(s) 129, 222, 270
DpnII GATC 3 cut(s) 127, 220, 268
DrdI GACNNNNNNGTC 1 cut(s) 178
DseDI GACNNNNNNGTC 1 cut(s) 178
Ecl136II GAGCTC 1 cut(s) 292
Eco24I GRGCYC 1 cut(s) 294
Eco47I GGWCC 1 cut(s) 109
Eco53kI GAGCTC 1 cut(s) 292
Eco88I CYCGRG 1 cut(s) 213
EcoICRI GAGCTC 1 cut(s) 292
EcoT38I GRGCYC 1 cut(s) 294
Esp3I CGTCTC 1 cut(s) 255
FaeI CATG 4 cut(s) 145, 190, 208, 253
FaiI YATR 7 cut(s) 116, 143, 188, 206, 251, 255, 279
FatI CATG 4 cut(s) 141, 186, 204, 249
FauI CCCGC 1 cut(s) 16
Fnu4HI GCNGC 3 cut(s) 202, 461, 571
FokI GGATG 2 cut(s) 77, 169
FriOI GRGCYC 1 cut(s) 294
Fsp4HI GCNGC 3 cut(s) 202, 461, 571
GluI GCNGC 3 cut(s) 202, 461, 571
GsaI CCCAGC 1 cut(s) 24
GsuI CTGGAG 1 cut(s) 308
HaeIII GGCC 1 cut(s) 212
HapII CCGG 1 cut(s) 421
Hin1II CATG 4 cut(s) 145, 190, 208, 253
HinfI GANTC 2 cut(s) 4, 49
HpaII CCGG 1 cut(s) 421
HphI GGTGA 1 cut(s) 442
Hpy188I TCNGA 1 cut(s) 273
Hpy188III TCNNGA 3 cut(s) 224, 295, 491
HpyAV CCTTC 1 cut(s) 337
HpyCH4III ACNGT 1 cut(s) 175
HpyCH4V TGCA 5 cut(s) 164, 201, 463, 476, 563
HpyF10VI GCNNNNNNNGC 3 cut(s) 17, 332, 392
HpyF3I CTNAG 2 cut(s) 348, 396
Hsp92II CATG 4 cut(s) 145, 190, 208, 253
Kzo9I GATC 3 cut(s) 127, 220, 268
LmnI GCTCC 1 cut(s) 289
LpnPI CCDG 8 cut(s) 6, 68, 87, 141, 272, 434, 476, 534
Lsp1109I GCAGC 3 cut(s) 213, 447, 582
LweI GCATC 1 cut(s) 20
MalI GATC 3 cut(s) 129, 222, 270
MboI GATC 3 cut(s) 127, 220, 268
MboII GAAGA 4 cut(s) 122, 142, 230, 352
MhlI GDGCHC 1 cut(s) 294
MluCI AATT 4 cut(s) 121, 195, 274, 470
MnlI CCTC 7 cut(s) 144, 251, 300, 321, 325, 391, 426
MroXI GAANNNNTTC 2 cut(s) 78, 149
MseI TTAA 2 cut(s) 54, 242
MspI CCGG 1 cut(s) 421
Mva1269I GAATGC 2 cut(s) 463, 500
MwoI GCNNNNNNNGC 3 cut(s) 17, 332, 392
NdeII GATC 3 cut(s) 127, 220, 268
NlaIII CATG 4 cut(s) 145, 190, 208, 253
NspI RCATGY 1 cut(s) 253
NspV TTCGAA 1 cut(s) 455
PciI ACATGT 1 cut(s) 249
PcsI WCGNNNNNNNCGW 1 cut(s) 243
PctI GAATGC 2 cut(s) 463, 500
PdmI GAANNNNTTC 2 cut(s) 78, 149
PfeI GAWTC 2 cut(s) 4, 49
PkrI GCNGC 3 cut(s) 203, 462, 572
PscI ACATGT 1 cut(s) 249
Psp124BI GAGCTC 1 cut(s) 294
PspFI CCCAGC 1 cut(s) 20
PspPI GGNCC 2 cut(s) 109, 211
PstI CTGCAG 1 cut(s) 166
PstNI CAGNNNCTG 1 cut(s) 161
SacI GAGCTC 1 cut(s) 294
SaqAI TTAA 2 cut(s) 54, 242
SatI GCNGC 3 cut(s) 202, 461, 571
Sau3AI GATC 3 cut(s) 127, 220, 268
Sau96I GGNCC 2 cut(s) 109, 211
SduI GDGCHC 1 cut(s) 294
SfaNI GCATC 1 cut(s) 20
SfcI CTRYAG 1 cut(s) 162
SfuI TTCGAA 1 cut(s) 455
SinI GGWCC 1 cut(s) 109
SmlI CTYRAG 2 cut(s) 304, 440
SmoI CTYRAG 2 cut(s) 304, 440
Sse9I AATT 4 cut(s) 121, 195, 274, 470
SsiI CCGC 1 cut(s) 9
SspI AATATT 1 cut(s) 78
SstI GAGCTC 1 cut(s) 294
TaaI ACNGT 1 cut(s) 175
TaqI TCGA 2 cut(s) 246, 455
TasI AATT 4 cut(s) 121, 195, 274, 470
TfiI GAWTC 2 cut(s) 4, 49
Tru1I TTAA 2 cut(s) 54, 242
Tru9I TTAA 2 cut(s) 54, 242
TseI GCWGC 3 cut(s) 201, 460, 570
TspDTI ATGAA 5 cut(s) 17, 62, 87, 158, 203
VpaK11BI GGWCC 1 cut(s) 109
XapI RAATTY 1 cut(s) 195
XceI RCATGY 1 cut(s) 253
XmnI GAANNNNTTC 2 cut(s) 78, 149
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.