RchiOBHm_Chr5g0028611

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Forward (+)
22397311 .. 22399094
1784 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ30803

Sequence Viewer

Length: 993 bp
ATGTCTTCACAAGACTTGATGCATGATTTTCGTAGGCCAGTATTAAACCCACTTTCCAAGTTGCTAGTAACGGGTCTTGCAAGCTATGAAGGTGAAAAATGGGCTAAACACAGGAGGATTGTCAACCCATCATTCCATGTAGAGAAATTAAAGGAATGGGAGAGCTTGGCGTCCAAAGAGGGCTCACCATGTCTATTGGATGTTTGGCCATCTCTACAACACTTGATGGCTGATGTGATTTCTCGAACATCATTTGGAAGTAGTTATCAGGAAGGAAGGAAAATATTTGAACTCCTTAAAGAGCAAGCAACGCTTGTAATAAATGCATTACAAAGTGTTTACATACCAGGATGGAGGTTTCTACCAACTAAGGTGAACAAGAGGATGAAGAAAATTGACAAAGAGGTAAAAGGTTTACTCAAGAGTATAATAAATAAAAGAGAGAAGGCCATTGGGGCAGGAGAAGCCTCTAAAGATGACTTATTAGGTGCACTTATGGAGTCAAAATTCAAGGACATCCAGGGTGATGGGAAGACTACTTCAGTATTTCTGGTTTGGACAATGATATTACTTGGTCAAAGTCAGAATTGGCAAGATCGAGCAAGACAAGAGGTTTTGCAAGTCTTTGGGAGCAACAAGCCAGACTTTGATGTACTATCTCACCTAAAAGTACTGGAGTCCAAGTCGGCTTACCAACACTGCTCATTCACCGTGACAAGGAACTGTGGGGGTGATGATGCAAACGAGTTCAATCCTGAGAGGTTTTCAGAAGGAGTTTCCAAGGCAACAAAGAGCCAACTCTCATTCTTCCCTTTTGGAGGCGGTCCCCGGATTTGCATTGGACAAAACTTTGCTATGATGGAAGCGAAGATGGCCTTATCATTGATTTTGCTACACTTTGACTTTGAGCTTTCTCCATCTTATGCTCATGCTCCTTCCGCACCTATGATTCGACCACAGTATGGAGCTCTGATCATTTTACACAGACGTTAA

Protein Analysis

330

Amino Acids

37.22

Weight (kDa)

9.29

Isoelectric Point (pI)

42.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 22 - 226 3.2e-17 Cytochrome P450
p450 PF00067 246 - 307 7.4e-19 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000133)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G14610 AT3G14620 AT3G14630 AT3G14630 AT3G14640 AT3G14640 AT3G14650 AT3G14660 AT3G14660 AT3G14660 AT3G14680 AT3G14690 AT3G14690
fragaria_vesca FvH4_1g08410 FvH4_2g31040 FvH4_3g17200 FvH4_3g17200 FvH4_3g17220 FvH4_3g17220 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17260 FvH4_3g17260 FvH4_3g17263 FvH4_3g17264 FvH4_3g17265 FvH4_3g17266 FvH4_5g18530 FvH4_5g19690 FvH4_7g03990 FvH4_7g03990 FvH4_7g03990 FvH4_7g03990 FvH4_7g03990 FvH4_7g17900 FvH4_7g17900
malus_domestica MD02G1088200.v1.1 MD03G1224800.v1.1 MD03G1224900.v1.1 MD03G1225000.v1.1 MD11G1274100.v1.1 MD11G1274200.v1.1 MD11G1274300.v1.1 MD11G1274500.v1.1 MD11G1274600.v1.1 MD15G1050400.v1.1 MD15G1050500.v1.1 MD15G1050600.v1.1 MD15G1050700.v1.1
prunus_persica Prupe.1G404900_v2.0.a1 Prupe.1G404900_v2.0.a1 Prupe.4G152600_v2.0.a1 Prupe.4G152700_v2.0.a1 Prupe.4G152800_v2.0.a1 Prupe.4G152900_v2.0.a1 Prupe.4G153000_v2.0.a1 Prupe.7G201400_v2.0.a1 Prupe.7G201400_v2.0.a1
pyrus_communis pycom03g17310 pycom03g17330 pycom11g21520 pycom11g21600 pycom11g24180 pycom11g24190 pycom11g24200 pycom11g24210 pycom15g04890
rosa_chinensis RchiOBHm_Chr1g0327671 RchiOBHm_Chr1g0327711 RchiOBHm_Chr1g0327721 RchiOBHm_Chr2g0094501 RchiOBHm_Chr5g0028601 RchiOBHm_Chr5g0028611 RchiOBHm_Chr5g0028621 RchiOBHm_Chr5g0028661 RchiOBHm_Chr5g0028671 RchiOBHm_Chr5g0028701 RchiOBHm_Chr5g0028721 RchiOBHm_Chr5g0028741 RchiOBHm_Chr5g0028751 RchiOBHm_Chr5g0028771 RchiOBHm_Chr5g0028821 RchiOBHm_Chr6g0311761 RchiOBHm_Chr7g0204421
rosa_laevigata RLG00000003223 RLG00000003462 RLG00000010376 RLG00000012452 RLG00000016496 RLG00000018531 RLG00000018532 RLG00000018536 RLG00000029973 RLG00000029976 RLG00000033105 RLG00000033106 RLG00000033107 RLG00000033109 RLG00000033110 RLG00000033111 RLG00000033112 RLG00000033113 RLG00000033114 RLG00000033116 RLG00000033124
rosa_multiflora Rmu_co8029584.1_g000001 Rmu_co8159878.1_g000001 Rmu_co8310611.1_g000001 Rmu_sc0001000.1_g000004 Rmu_sc0001000.1_g000016 Rmu_sc0001575.1_g000020 Rmu_sc0001575.1_g000021 Rmu_sc0001575.1_g000022 Rmu_sc0001575.1_g000027 Rmu_sc0001575.1_g000035 Rmu_sc0001575.1_g000040 Rmu_sc0002888.1_g000039 Rmu_sc0003951.1_g000001 Rmu_sc0004359.1_g000045 Rmu_sc0005178.1_g000001 Rmu_sc0005178.1_g000002 Rmu_sc0005178.1_g000004 Rmu_sc0023855.1_g000001 Rmu_sc0024393.1_g000001 Rmu_sc0035326.1_g000001
rosa_roxburghii Rroxscaffold_1G00051080 Rroxscaffold_1G00051100 Rroxscaffold_1G00051110 Rroxscaffold_1G00051120 Rroxscaffold_1G00051150 Rroxscaffold_1G00051160 Rroxscaffold_1G00051170 Rroxscaffold_1G00051180 Rroxscaffold_2G00123610 Rroxscaffold_2G00147120 Rroxscaffold_3G00250540 Rroxscaffold_3G00253110 Rroxscaffold_3G00253120 Rroxscaffold_4G00322410 Rroxscaffold_4G00322440 Rroxscaffold_4G00322470 Rroxscaffold_7G00157330
rosa_rugosa Rorug01G0069500 Rorug01G0069600 Rorug01G0069700 Rorug02G0044200 Rorug02G0227700 Rorug05G0109800 Rorug05G0109900 Rorug05G0110000 Rorug05G0110100 Rorug05G0110300 Rorug05G0110400 Rorug05G0110500 Rorug07G0083800 Rorug07G0083900.1 Rorug07G0103700
rosa_samantha Rh1BG069000 Rh1BG069100 Rh1BG069200 Rh1CG084000 Rh1DG090700 Rh1DG090800 Rh1DG090900 Rh2AG092500 Rh2DG091600 Rh2DG309400 Rh5AG202100 Rh5AG202200 Rh5AG202500 Rh5AG202800 Rh5AG202900 Rh5CG220600 Rh5CG220700 Rh5CG220800 Rh5CG220900 Rh5CG221600 Rh5CG221900 Rh5CG222000 Rh5CG222100 Rh5DG203300 Rh5DG203400 Rh5DG203500 Rh5DG204100 Rh5DG204300 Rh5DG204400 Rh5DG204600 Rh6BG517600 Rh6CG523400 Rh6DG509100 Rh7AG213600 Rh7BG211400 Rh7DG220800
rosa_wichuraiana Rw0G010630 Rw1G006750 Rw1G006770 Rw5G018300 Rw5G018310 Rw5G018330 Rw6G044090 Rw7G018510 Rw7G020290

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 962
AciI CCGC 2 cut(s) 822, 939
AcoI YGGCCR 1 cut(s) 206
AcsI RAATTY 1 cut(s) 506
AcuI CTGAAG 1 cut(s) 525
AcyI GRCGYC 1 cut(s) 170
AfaI GTAC 2 cut(s) 654, 672
AfiI CCNNNNNNNGG 3 cut(s) 717, 818, 962
AgsI TTSAA 3 cut(s) 290, 511, 751
AjnI CCWGG 2 cut(s) 346, 519
AluBI AGCT 4 cut(s) 84, 165, 910, 968
AluI AGCT 4 cut(s) 84, 165, 910, 968
Alw21I GWGCWC 2 cut(s) 493, 970
Alw44I GTGCAC 1 cut(s) 489
AoxI GGCC 4 cut(s) 35, 206, 447, 873
ApaLI GTGCAC 1 cut(s) 489
ApoI RAATTY 1 cut(s) 506
AspS9I GGNCC 1 cut(s) 824
AsuC2I CCSGG 1 cut(s) 829
AsuHPI GGTGA 7 cut(s) 104, 177, 385, 536, 653, 700, 743
AvaII GGWCC 1 cut(s) 824
BaeGI GKGCMC 1 cut(s) 493
BalI TGGCCA 1 cut(s) 208
BanII GRGCYC 2 cut(s) 185, 970
BbsI GAAGAC 1 cut(s) 539
Bbv12I GWGCWC 2 cut(s) 493, 970
BccI CCATC 8 cut(s) 136, 217, 220, 345, 521, 853, 865, 925
BcgI CGANNNNNNTGC 2 cut(s) 11, 45
BciT130I CCWGG 2 cut(s) 348, 521
BclI TGATCA 1 cut(s) 972
BcnI CCSGG 1 cut(s) 829
BfaI CTAG 1 cut(s) 65
BglI GCCNNNNNGGC 1 cut(s) 455
BmcAI AGTACT 1 cut(s) 672
Bme1390I CCNGG 3 cut(s) 348, 521, 829
Bme18I GGWCC 1 cut(s) 824
BmgT120I GGNCC 1 cut(s) 824
BmiI GGNNCC 1 cut(s) 826
BmrFI CCNGG 3 cut(s) 348, 521, 829
BmsI GCATC 2 cut(s) 9, 727
BpiI GAAGAC 1 cut(s) 539
BpmI CTGGAG 1 cut(s) 695
BpuEI CTTGAG 1 cut(s) 404
BpuMI CCSGG 1 cut(s) 829
BsaHI GRCGYC 1 cut(s) 170
BsaJI CCNNGG 3 cut(s) 520, 780, 827
BsaXI ACNNNNNCTCC 2 cut(s) 668, 698
Bsc4I CCNNNNNNNGG 3 cut(s) 717, 818, 962
Bse1I ACTGG 2 cut(s) 38, 678
BseBI CCWGG 2 cut(s) 348, 521
BseDI CCNNGG 3 cut(s) 520, 780, 827
BseGI GGATG 4 cut(s) 205, 356, 390, 516
BseLI CCNNNNNNNGG 3 cut(s) 717, 818, 962
BseMII CTCAG 1 cut(s) 747
BseNI ACTGG 2 cut(s) 38, 678
BseSI GKGCMC 1 cut(s) 493
BshFI GGCC 4 cut(s) 37, 208, 449, 875
BsiHKAI GWGCWC 2 cut(s) 493, 970
BsiSI CCGG 1 cut(s) 829
BslFI GGGAC 1 cut(s) 810
BslI CCNNNNNNNGG 3 cut(s) 717, 818, 962
BsmFI GGGAC 1 cut(s) 810
BsnI GGCC 4 cut(s) 37, 208, 449, 875
Bsp1286I GDGCHC 3 cut(s) 185, 493, 970
Bsp143I GATC 2 cut(s) 595, 972
BspACI CCGC 2 cut(s) 822, 939
BspANI GGCC 4 cut(s) 37, 208, 449, 875
BspCNI CTCAG 1 cut(s) 748
BspLI GGNNCC 1 cut(s) 826
BsrI ACTGG 2 cut(s) 38, 678
BssECI CCNNGG 3 cut(s) 520, 780, 827
BssMI GATC 2 cut(s) 595, 972
BssNI GRCGYC 1 cut(s) 170
BssT1I CCWWGG 1 cut(s) 780
Bst2UI CCWGG 2 cut(s) 348, 521
Bst4CI ACNGT 3 cut(s) 712, 725, 960
BstACI GRCGYC 1 cut(s) 170
BstC8I GCNNGC 2 cut(s) 82, 306
BstDEI CTNAG 2 cut(s) 369, 756
BstENI CCTNNNNNAGG 1 cut(s) 816
BstF5I GGATG 4 cut(s) 205, 356, 390, 516
BstKTI GATC 2 cut(s) 598, 975
BstMBI GATC 2 cut(s) 595, 972
BstMWI GCNNNNNNNGC 5 cut(s) 310, 455, 464, 872, 938
BstNI CCWGG 2 cut(s) 348, 521
BstSCI CCNGG 3 cut(s) 346, 519, 827
BstSLI GKGCMC 1 cut(s) 493
BstV2I GAAGAC 1 cut(s) 539
BstXI CCANNNNNNTGG 1 cut(s) 527
BsuRI GGCC 4 cut(s) 37, 208, 449, 875
BtsCI GGATG 4 cut(s) 205, 356, 390, 516
BtsI GCAGTG 1 cut(s) 697
BtsIMutI CAGTG 1 cut(s) 697
Cac8I GCNNGC 2 cut(s) 82, 306
Cfr13I GGNCC 1 cut(s) 824
CseI GACGC 1 cut(s) 159
Csp6I GTAC 2 cut(s) 653, 671
CviAII CATG 4 cut(s) 23, 137, 189, 929
CviQI GTAC 2 cut(s) 653, 671
DdeI CTNAG 2 cut(s) 369, 756
DpnI GATC 2 cut(s) 597, 974
DpnII GATC 2 cut(s) 595, 972
EaeI YGGCCR 1 cut(s) 206
Ecl136II GAGCTC 1 cut(s) 968
Eco130I CCWWGG 1 cut(s) 780
Eco24I GRGCYC 2 cut(s) 185, 970
Eco47I GGWCC 1 cut(s) 824
Eco53kI GAGCTC 1 cut(s) 968
Eco57I CTGAAG 1 cut(s) 525
EcoICRI GAGCTC 1 cut(s) 968
EcoNI CCTNNNNNAGG 1 cut(s) 816
EcoRII CCWGG 2 cut(s) 346, 519
EcoT14I CCWWGG 1 cut(s) 780
EcoT22I ATGCAT 2 cut(s) 24, 328
EcoT38I GRGCYC 2 cut(s) 185, 970
ErhI CCWWGG 1 cut(s) 780
FaeI CATG 4 cut(s) 26, 140, 192, 932
FalI AAGNNNNNCTT 6 cut(s) 297, 329, 629, 661, 860, 892
FaqI GGGAC 1 cut(s) 810
FatI CATG 4 cut(s) 22, 136, 188, 928
FbaI TGATCA 1 cut(s) 972
FokI GGATG 4 cut(s) 212, 363, 397, 503
FriOI GRGCYC 2 cut(s) 185, 970
FspBI CTAG 1 cut(s) 65
GsuI CTGGAG 1 cut(s) 695
HaeIII GGCC 4 cut(s) 37, 208, 449, 875
HapII CCGG 1 cut(s) 829
HgaI GACGC 1 cut(s) 159
Hin1I GRCGYC 1 cut(s) 170
Hin1II CATG 4 cut(s) 26, 140, 192, 932
HincII GTYRAC 1 cut(s) 124
HindII GTYRAC 1 cut(s) 124
HinfI GANTC 3 cut(s) 500, 677, 949
HpaII CCGG 1 cut(s) 829
HphI GGTGA 7 cut(s) 104, 177, 385, 536, 653, 700, 743
Hpy166II GTNNAC 5 cut(s) 124, 340, 376, 416, 491
Hpy188I TCNGA 3 cut(s) 585, 769, 972
Hpy188III TCNNGA 4 cut(s) 243, 269, 421, 755
Hpy8I GTNNAC 5 cut(s) 124, 340, 376, 416, 491
HpyAV CCTTC 6 cut(s) 83, 266, 270, 439, 764, 945
HpyCH4III ACNGT 3 cut(s) 712, 725, 960
HpyCH4IV ACGT 1 cut(s) 988
HpyCH4V TGCA 7 cut(s) 22, 80, 326, 491, 619, 740, 837
HpyF10VI GCNNNNNNNGC 5 cut(s) 310, 455, 464, 872, 938
HpyF3I CTNAG 2 cut(s) 369, 756
HpySE526I ACGT 1 cut(s) 988
Hsp92I GRCGYC 1 cut(s) 170
Hsp92II CATG 4 cut(s) 26, 140, 192, 932
Ksp22I TGATCA 1 cut(s) 972
Kzo9I GATC 2 cut(s) 595, 972
LmnI GCTCC 3 cut(s) 630, 937, 965
LweI GCATC 2 cut(s) 9, 727
MaeI CTAG 1 cut(s) 65
MaeII ACGT 1 cut(s) 988
MaeIII GTNAC 2 cut(s) 67, 712
MalI GATC 2 cut(s) 597, 974
MboI GATC 2 cut(s) 595, 972
MboII GAAGA 4 cut(s) 400, 544, 799, 880
MhlI GDGCHC 3 cut(s) 185, 493, 970
MlsI TGGCCA 1 cut(s) 208
MluCI AATT 4 cut(s) 146, 393, 506, 586
MluNI TGGCCA 1 cut(s) 208
MlyI GAGTC 2 cut(s) 509, 686
MnlI CCTC 9 cut(s) 108, 172, 348, 375, 397, 478, 604, 753, 812
Mox20I TGGCCA 1 cut(s) 208
Mph1103I ATGCAT 2 cut(s) 24, 328
MscI TGGCCA 1 cut(s) 208
MseI TTAA 4 cut(s) 44, 149, 297, 991
Msp20I TGGCCA 1 cut(s) 208
MspI CCGG 1 cut(s) 829
MspR9I CCNGG 3 cut(s) 348, 521, 829
MvaI CCWGG 2 cut(s) 348, 521
MwoI GCNNNNNNNGC 5 cut(s) 310, 455, 464, 872, 938
NciI CCSGG 1 cut(s) 829
NdeII GATC 2 cut(s) 595, 972
NlaIII CATG 4 cut(s) 26, 140, 192, 932
NlaIV GGNNCC 1 cut(s) 826
NmuCI GTSAC 1 cut(s) 712
NsiI ATGCAT 2 cut(s) 24, 328
PfeI GAWTC 1 cut(s) 949
PflMI CCANNNNNTGG 1 cut(s) 962
PleI GAGTC 2 cut(s) 508, 685
PpsI GAGTC 2 cut(s) 508, 685
Psp124BI GAGCTC 1 cut(s) 970
Psp6I CCWGG 2 cut(s) 346, 519
PspGI CCWGG 2 cut(s) 346, 519
PspN4I GGNNCC 1 cut(s) 826
PspPI GGNCC 1 cut(s) 824
RsaI GTAC 2 cut(s) 654, 672
RsaNI GTAC 2 cut(s) 653, 671
SacI GAGCTC 1 cut(s) 970
SaqAI TTAA 4 cut(s) 44, 149, 297, 991
Sau3AI GATC 2 cut(s) 595, 972
Sau96I GGNCC 1 cut(s) 824
ScaI AGTACT 1 cut(s) 672
SchI GAGTC 2 cut(s) 509, 686
ScrFI CCNGG 3 cut(s) 348, 521, 829
SduI GDGCHC 3 cut(s) 185, 493, 970
SfaNI GCATC 2 cut(s) 9, 727
SinI GGWCC 1 cut(s) 824
SmlI CTYRAG 1 cut(s) 419
SmoI CTYRAG 1 cut(s) 419
Sse9I AATT 4 cut(s) 146, 393, 506, 586
SsiI CCGC 2 cut(s) 822, 939
SspI AATATT 1 cut(s) 285
SspMI CTAG 1 cut(s) 65
SstI GAGCTC 1 cut(s) 970
StyD4I CCNGG 3 cut(s) 346, 519, 827
StyI CCWWGG 1 cut(s) 780
TaaI ACNGT 3 cut(s) 712, 725, 960
TaiI ACGT 1 cut(s) 991
TaqI TCGA 3 cut(s) 244, 598, 952
TasI AATT 4 cut(s) 146, 393, 506, 586
TatI WGTACW 2 cut(s) 652, 670
TfiI GAWTC 1 cut(s) 949
Tru1I TTAA 4 cut(s) 44, 149, 297, 991
Tru9I TTAA 4 cut(s) 44, 149, 297, 991
TscAI CASTG 1 cut(s) 704
TseFI GTSAC 1 cut(s) 712
Tsp45I GTSAC 1 cut(s) 712
TspDTI ATGAA 2 cut(s) 102, 401
TspRI CASTG 1 cut(s) 704
Van91I CCANNNNNTGG 1 cut(s) 962
VneI GTGCAC 1 cut(s) 489
VpaK11BI GGWCC 1 cut(s) 824
XagI CCTNNNNNAGG 1 cut(s) 816
XapI RAATTY 1 cut(s) 506
XspI CTAG 1 cut(s) 65
ZrmI AGTACT 1 cut(s) 672
Zsp2I ATGCAT 2 cut(s) 24, 328
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.