Rorug01G0069500

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Reverse (-)
11369665 .. 11372061
2397 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0069500.1

Sequence Viewer

Length: 750 bp
ATGCGCAGAAAGAGCATTACTGCTTATCCGGCGTCGCCGCCGTCGAGCACGTCCCGCTCAGCCGACGGTAGGGTCGAGTTTGCCTTTGGTTGTGCTCCTCCAATCCCTCAGTACCTCCCACGCGCCGCCCAGCGTCGGCTACGTCCTTACCAGTTCATCCTCTGCCTCGGCTCCGTCGACCGCGCCACCGACTCCACTCTAGTTGCCGACCTCGGTTGTCAATCTTTGACGCATTTCGACGGCCAAATTTCCGGTGTTACGGCTACGAAGGTGGTTTTGGTACGAGAGGATTTCTTTGCGAGGACGTTGACATTGAACAGGCCTCGGCAACTGAATGCCCTTAACTTTGAAATGTCTCTGCGTCACCTCCCTAGATGGAGCTCGGAAACTGTATCCACTAATGTCAATTGGGTTGTTGTGGGCACAACGTTTCAAGTCTCTGTACACAGTGGCAGTGCCAGAATGCCATTGACAATTGCACATAAAATTGCTAGCTTGGAGTCTCTACAAGAGATCCTTATGAGGCATTATACTCGCAACTTCGTCATGAGATGTTTAAGGGACTCAGAGGTCTTCTTCAACCACCGATCAATGGAGTTGAGAATCATGGTCTTCCTGTTGTGCTCTAAGTATCTATCGCGCAGGCGTAGCTTTAGATATTACAGGTTTCGTTGGCCAAACCAGCTGCTAGGATTCTTGAAGTTGCTGGAAAAACTGCACAGAGCATTAGAACCCGATAGGATCTATTGA

Protein Analysis

249

Amino Acids

28.83

Weight (kDa)

10.57

Isoelectric Point (pI)

55.6

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000133)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G14610 AT3G14620 AT3G14630 AT3G14630 AT3G14640 AT3G14640 AT3G14650 AT3G14660 AT3G14660 AT3G14660 AT3G14680 AT3G14690 AT3G14690
fragaria_vesca FvH4_1g08410 FvH4_2g31040 FvH4_3g17200 FvH4_3g17200 FvH4_3g17220 FvH4_3g17220 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17260 FvH4_3g17260 FvH4_3g17263 FvH4_3g17264 FvH4_3g17265 FvH4_3g17266 FvH4_5g18530 FvH4_5g19690 FvH4_7g03990 FvH4_7g03990 FvH4_7g03990 FvH4_7g03990 FvH4_7g03990 FvH4_7g17900 FvH4_7g17900
malus_domestica MD02G1088200.v1.1 MD03G1224800.v1.1 MD03G1224900.v1.1 MD03G1225000.v1.1 MD11G1274100.v1.1 MD11G1274200.v1.1 MD11G1274300.v1.1 MD11G1274500.v1.1 MD11G1274600.v1.1 MD15G1050400.v1.1 MD15G1050500.v1.1 MD15G1050600.v1.1 MD15G1050700.v1.1
prunus_persica Prupe.1G404900_v2.0.a1 Prupe.1G404900_v2.0.a1 Prupe.4G152600_v2.0.a1 Prupe.4G152700_v2.0.a1 Prupe.4G152800_v2.0.a1 Prupe.4G152900_v2.0.a1 Prupe.4G153000_v2.0.a1 Prupe.7G201400_v2.0.a1 Prupe.7G201400_v2.0.a1
pyrus_communis pycom03g17310 pycom03g17330 pycom11g21520 pycom11g21600 pycom11g24180 pycom11g24190 pycom11g24200 pycom11g24210 pycom15g04890
rosa_chinensis RchiOBHm_Chr1g0327671 RchiOBHm_Chr1g0327711 RchiOBHm_Chr1g0327721 RchiOBHm_Chr2g0094501 RchiOBHm_Chr5g0028601 RchiOBHm_Chr5g0028611 RchiOBHm_Chr5g0028621 RchiOBHm_Chr5g0028661 RchiOBHm_Chr5g0028671 RchiOBHm_Chr5g0028701 RchiOBHm_Chr5g0028721 RchiOBHm_Chr5g0028741 RchiOBHm_Chr5g0028751 RchiOBHm_Chr5g0028771 RchiOBHm_Chr5g0028821 RchiOBHm_Chr6g0311761 RchiOBHm_Chr7g0204421
rosa_laevigata RLG00000003223 RLG00000003462 RLG00000010376 RLG00000012452 RLG00000016496 RLG00000018531 RLG00000018532 RLG00000018536 RLG00000029973 RLG00000029976 RLG00000033105 RLG00000033106 RLG00000033107 RLG00000033109 RLG00000033110 RLG00000033111 RLG00000033112 RLG00000033113 RLG00000033114 RLG00000033116 RLG00000033124
rosa_multiflora Rmu_co8029584.1_g000001 Rmu_co8159878.1_g000001 Rmu_co8310611.1_g000001 Rmu_sc0001000.1_g000004 Rmu_sc0001000.1_g000016 Rmu_sc0001575.1_g000020 Rmu_sc0001575.1_g000021 Rmu_sc0001575.1_g000022 Rmu_sc0001575.1_g000027 Rmu_sc0001575.1_g000035 Rmu_sc0001575.1_g000040 Rmu_sc0002888.1_g000039 Rmu_sc0003951.1_g000001 Rmu_sc0004359.1_g000045 Rmu_sc0005178.1_g000001 Rmu_sc0005178.1_g000002 Rmu_sc0005178.1_g000004 Rmu_sc0023855.1_g000001 Rmu_sc0024393.1_g000001 Rmu_sc0035326.1_g000001
rosa_roxburghii Rroxscaffold_1G00051080 Rroxscaffold_1G00051100 Rroxscaffold_1G00051110 Rroxscaffold_1G00051120 Rroxscaffold_1G00051150 Rroxscaffold_1G00051160 Rroxscaffold_1G00051170 Rroxscaffold_1G00051180 Rroxscaffold_2G00123610 Rroxscaffold_2G00147120 Rroxscaffold_3G00250540 Rroxscaffold_3G00253110 Rroxscaffold_3G00253120 Rroxscaffold_4G00322410 Rroxscaffold_4G00322440 Rroxscaffold_4G00322470 Rroxscaffold_7G00157330
rosa_rugosa Rorug01G0069500 Rorug01G0069600 Rorug01G0069700 Rorug02G0044200 Rorug02G0227700 Rorug05G0109800 Rorug05G0109900 Rorug05G0110000 Rorug05G0110100 Rorug05G0110300 Rorug05G0110400 Rorug05G0110500 Rorug07G0083800 Rorug07G0083900.1 Rorug07G0103700
rosa_samantha Rh1BG069000 Rh1BG069100 Rh1BG069200 Rh1CG084000 Rh1DG090700 Rh1DG090800 Rh1DG090900 Rh2AG092500 Rh2DG091600 Rh2DG309400 Rh5AG202100 Rh5AG202200 Rh5AG202500 Rh5AG202800 Rh5AG202900 Rh5CG220600 Rh5CG220700 Rh5CG220800 Rh5CG220900 Rh5CG221600 Rh5CG221900 Rh5CG222000 Rh5CG222100 Rh5DG203300 Rh5DG203400 Rh5DG203500 Rh5DG204100 Rh5DG204300 Rh5DG204400 Rh5DG204600 Rh6BG517600 Rh6CG523400 Rh6DG509100 Rh7AG213600 Rh7BG211400 Rh7DG220800
rosa_wichuraiana Rw0G010630 Rw1G006750 Rw1G006770 Rw5G018300 Rw5G018310 Rw5G018330 Rw6G044090 Rw7G018510 Rw7G020290

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 71, 569
Acc16I TGCGCA 1 cut(s) 5
AccBSI CCGCTC 1 cut(s) 57
AccI GTMKAC 1 cut(s) 177
AccII CGCG 3 cut(s) 123, 183, 640
AciI CCGC 4 cut(s) 38, 55, 126, 181
AclI AACGTT 1 cut(s) 428
AclWI GGATC 2 cut(s) 508, 749
AcoI YGGCCR 2 cut(s) 241, 674
AcsI RAATTY 1 cut(s) 246
AcyI GRCGYC 1 cut(s) 32
AfaI GTAC 3 cut(s) 113, 282, 444
AfiI CCNNNNNNNGG 3 cut(s) 69, 135, 592
AgsI TTSAA 5 cut(s) 316, 350, 434, 580, 700
AjiI CACGTC 1 cut(s) 51
AjuI GAANNNNNNNTTGG 2 cut(s) 260, 292
AluBI AGCT 4 cut(s) 381, 495, 651, 685
AluI AGCT 4 cut(s) 381, 495, 651, 685
Alw21I GWGCWC 4 cut(s) 50, 97, 383, 626
Alw26I GTCTC 3 cut(s) 360, 442, 507
AlwI GGATC 2 cut(s) 508, 749
AoxI GGCC 3 cut(s) 241, 320, 674
ApeKI GCWGC 1 cut(s) 685
ApoI RAATTY 1 cut(s) 246
AspLEI GCGC 4 cut(s) 6, 125, 185, 642
AsuHPI GGTGA 1 cut(s) 356
AsuNHI GCTAGC 1 cut(s) 491
BaeGI GKGCMC 1 cut(s) 425
BalI TGGCCA 1 cut(s) 676
BanII GRGCYC 1 cut(s) 383
BbsI GAAGAC 2 cut(s) 565, 604
Bbv12I GWGCWC 4 cut(s) 50, 97, 383, 626
BbvI GCAGC 1 cut(s) 672
BccI CCATC 1 cut(s) 369
BceAI ACGGC 3 cut(s) 25, 256, 276
BcgI CGANNNNNNTGC 2 cut(s) 515, 549
BciVI GTATCC 1 cut(s) 403
BcoDI GTCTC 3 cut(s) 360, 442, 507
BfaI CTAG 4 cut(s) 200, 372, 492, 689
BfuI GTATCC 1 cut(s) 403
BisI GCNGC 3 cut(s) 38, 126, 686
BlpI GCTNAGC 1 cut(s) 58
BlsI GCNGC 3 cut(s) 39, 127, 687
BmgBI CACGTC 1 cut(s) 51
BmiI GGNNCC 1 cut(s) 172
BmtI GCTAGC 1 cut(s) 495
BpiI GAAGAC 2 cut(s) 565, 604
Bpu1102I GCTNAGC 1 cut(s) 58
BsaHI GRCGYC 1 cut(s) 32
BsaJI CCNNGG 3 cut(s) 166, 211, 323
BsaWI WCCGGW 1 cut(s) 251
Bsc4I CCNNNNNNNGG 3 cut(s) 69, 135, 592
Bse1I ACTGG 1 cut(s) 151
BseDI CCNNGG 3 cut(s) 166, 211, 323
BseGI GGATG 1 cut(s) 156
BseLI CCNNNNNNNGG 3 cut(s) 69, 135, 592
BseMII CTCAG 3 cut(s) 72, 122, 579
BseNI ACTGG 1 cut(s) 151
BseRI GAGGAG 1 cut(s) 87
BseSI GKGCMC 1 cut(s) 425
BseXI GCAGC 1 cut(s) 672
BseYI CCCAGC 1 cut(s) 129
BsgI GTGCAG 1 cut(s) 701
Bsh1236I CGCG 3 cut(s) 123, 183, 640
Bsh1285I CGRYCG 1 cut(s) 181
BshFI GGCC 3 cut(s) 243, 322, 676
BsiEI CGRYCG 1 cut(s) 181
BsiHKAI GWGCWC 4 cut(s) 50, 97, 383, 626
BsiSI CCGG 2 cut(s) 29, 252
BslFI GGGAC 2 cut(s) 37, 575
BslI CCNNNNNNNGG 3 cut(s) 69, 135, 592
BsmAI GTCTC 3 cut(s) 360, 442, 507
BsmFI GGGAC 2 cut(s) 37, 575
BsmI GAATGC 2 cut(s) 340, 468
BsnI GGCC 3 cut(s) 243, 322, 676
Bsp1286I GDGCHC 5 cut(s) 50, 97, 383, 425, 626
Bsp1407I TGTACA 1 cut(s) 442
Bsp143I GATC 3 cut(s) 513, 587, 741
Bsp1720I GCTNAGC 1 cut(s) 58
BspACI CCGC 4 cut(s) 38, 55, 126, 181
BspANI GGCC 3 cut(s) 243, 322, 676
BspCNI CTCAG 3 cut(s) 71, 121, 578
BspFNI CGCG 3 cut(s) 123, 183, 640
BspHI TCATGA 1 cut(s) 546
BspLI GGNNCC 1 cut(s) 172
BspOI GCTAGC 1 cut(s) 495
BspPI GGATC 2 cut(s) 508, 749
BsrBI CCGCTC 1 cut(s) 57
BsrGI TGTACA 1 cut(s) 442
BsrI ACTGG 1 cut(s) 151
BssECI CCNNGG 3 cut(s) 166, 211, 323
BssMI GATC 3 cut(s) 513, 587, 741
BssNI GRCGYC 1 cut(s) 32
Bst4CI ACNGT 3 cut(s) 68, 391, 449
BstACI GRCGYC 1 cut(s) 32
BstAUI TGTACA 1 cut(s) 442
BstC8I GCNNGC 2 cut(s) 493, 644
BstDEI CTNAG 4 cut(s) 58, 108, 565, 627
BstF5I GGATG 1 cut(s) 156
BstFNI CGCG 3 cut(s) 123, 183, 640
BstHHI GCGC 4 cut(s) 6, 125, 185, 642
BstKTI GATC 3 cut(s) 516, 590, 744
BstMAI GTCTC 3 cut(s) 360, 442, 507
BstMBI GATC 3 cut(s) 513, 587, 741
BstMCI CGRYCG 1 cut(s) 181
BstMWI GCNNNNNNNGC 5 cut(s) 12, 29, 54, 648, 682
BstSLI GKGCMC 1 cut(s) 425
BstUI CGCG 3 cut(s) 123, 183, 640
BstV1I GCAGC 1 cut(s) 672
BstV2I GAAGAC 2 cut(s) 565, 604
BstX2I RGATCY 2 cut(s) 513, 741
BstYI RGATCY 2 cut(s) 513, 741
BsuI GTATCC 1 cut(s) 403
BsuRI GGCC 3 cut(s) 243, 322, 676
BtrI CACGTC 1 cut(s) 51
BtsCI GGATG 1 cut(s) 156
BtsI GCAGTG 1 cut(s) 460
BtsIMutI CAGTG 2 cut(s) 454, 460
Cac8I GCNNGC 2 cut(s) 493, 644
CciI TCATGA 1 cut(s) 546
CfoI GCGC 4 cut(s) 6, 125, 185, 642
CseI GACGC 4 cut(s) 21, 122, 238, 350
Csp6I GTAC 3 cut(s) 112, 281, 443
CspCI CAANNNNNGTGG 2 cut(s) 184, 219
CviAII CATG 2 cut(s) 547, 607
CviQI GTAC 3 cut(s) 112, 281, 443
DdeI CTNAG 4 cut(s) 58, 108, 565, 627
DpnI GATC 3 cut(s) 515, 589, 743
DpnII GATC 3 cut(s) 513, 587, 741
DrdI GACNNNNNNGTC 2 cut(s) 71, 569
DseDI GACNNNNNNGTC 2 cut(s) 71, 569
EaeI YGGCCR 2 cut(s) 241, 674
Ecl136II GAGCTC 1 cut(s) 381
Eco147I AGGCCT 1 cut(s) 322
Eco24I GRGCYC 1 cut(s) 383
Eco53kI GAGCTC 1 cut(s) 381
EcoICRI GAGCTC 1 cut(s) 381
EcoT38I GRGCYC 1 cut(s) 383
FaeI CATG 2 cut(s) 550, 610
FaiI YATR 5 cut(s) 483, 521, 531, 548, 608
FalI AAGNNNNNCTT 2 cut(s) 501, 533
FaqI GGGAC 2 cut(s) 37, 575
FatI CATG 2 cut(s) 546, 606
FauI CCCGC 1 cut(s) 62
FblI GTMKAC 1 cut(s) 177
Fnu4HI GCNGC 3 cut(s) 38, 126, 686
FokI GGATG 1 cut(s) 143
FriOI GRGCYC 1 cut(s) 383
Fsp4HI GCNGC 3 cut(s) 38, 126, 686
FspBI CTAG 4 cut(s) 200, 372, 492, 689
FspI TGCGCA 1 cut(s) 5
GlaI GCGC 4 cut(s) 5, 124, 184, 641
GluI GCNGC 3 cut(s) 38, 126, 686
GsaI CCCAGC 1 cut(s) 133
HaeIII GGCC 3 cut(s) 243, 322, 676
HapII CCGG 2 cut(s) 29, 252
HgaI GACGC 4 cut(s) 21, 122, 238, 350
HhaI GCGC 4 cut(s) 6, 125, 185, 642
Hin1I GRCGYC 1 cut(s) 32
Hin1II CATG 2 cut(s) 550, 610
Hin6I GCGC 4 cut(s) 4, 123, 183, 640
HinP1I GCGC 4 cut(s) 4, 123, 183, 640
HincII GTYRAC 2 cut(s) 178, 309
HindII GTYRAC 2 cut(s) 178, 309
HinfI GANTC 5 cut(s) 191, 500, 563, 603, 693
HpaII CCGG 2 cut(s) 29, 252
HphI GGTGA 1 cut(s) 356
Hpy166II GTNNAC 3 cut(s) 178, 309, 445
Hpy188I TCNGA 2 cut(s) 385, 568
Hpy188III TCNNGA 2 cut(s) 547, 697
Hpy8I GTNNAC 3 cut(s) 178, 309, 445
Hpy99I CGWCG 6 cut(s) 37, 46, 68, 138, 179, 242
HpyAV CCTTC 1 cut(s) 262
HpyCH4III ACNGT 3 cut(s) 68, 391, 449
HpyCH4IV ACGT 4 cut(s) 50, 142, 305, 428
HpyCH4V TGCA 2 cut(s) 479, 718
HpyF10VI GCNNNNNNNGC 5 cut(s) 12, 29, 54, 648, 682
HpyF3I CTNAG 4 cut(s) 58, 108, 565, 627
HpySE526I ACGT 4 cut(s) 50, 142, 305, 428
Hsp92I GRCGYC 1 cut(s) 32
Hsp92II CATG 2 cut(s) 550, 610
HspAI GCGC 4 cut(s) 4, 123, 183, 640
Kzo9I GATC 3 cut(s) 513, 587, 741
LmnI GCTCC 3 cut(s) 100, 176, 378
Lsp1109I GCAGC 1 cut(s) 672
MaeI CTAG 4 cut(s) 200, 372, 492, 689
MaeII ACGT 4 cut(s) 50, 142, 305, 428
MaeIII GTNAC 2 cut(s) 256, 362
MalI GATC 3 cut(s) 515, 589, 743
MbiI CCGCTC 1 cut(s) 57
MboI GATC 3 cut(s) 513, 587, 741
MboII GAAGA 3 cut(s) 565, 568, 604
MfeI CAATTG 2 cut(s) 406, 474
MflI RGATCY 2 cut(s) 513, 741
MhlI GDGCHC 5 cut(s) 50, 97, 383, 425, 626
MlsI TGGCCA 1 cut(s) 676
MluCI AATT 4 cut(s) 246, 406, 474, 486
MluNI TGGCCA 1 cut(s) 676
MlyI GAGTC 3 cut(s) 185, 509, 557
Mox20I TGGCCA 1 cut(s) 676
MscI TGGCCA 1 cut(s) 676
MseI TTAA 2 cut(s) 342, 557
Msp20I TGGCCA 1 cut(s) 676
MspA1I CMGCKG 1 cut(s) 685
MspI CCGG 2 cut(s) 29, 252
MunI CAATTG 2 cut(s) 406, 474
Mva1269I GAATGC 2 cut(s) 340, 468
MvnI CGCG 3 cut(s) 123, 183, 640
MwoI GCNNNNNNNGC 5 cut(s) 12, 29, 54, 648, 682
NdeII GATC 3 cut(s) 513, 587, 741
NheI GCTAGC 1 cut(s) 491
NlaIII CATG 2 cut(s) 550, 610
NlaIV GGNNCC 1 cut(s) 172
NmeAIII GCCGAG 2 cut(s) 147, 304
NmuCI GTSAC 1 cut(s) 362
NsbI TGCGCA 1 cut(s) 5
PagI TCATGA 1 cut(s) 546
PceI AGGCCT 1 cut(s) 322
PcsI WCGNNNNNNNCGW 3 cut(s) 41, 72, 174
PctI GAATGC 2 cut(s) 340, 468
PfeI GAWTC 2 cut(s) 603, 693
PkrI GCNGC 3 cut(s) 39, 127, 687
PleI GAGTC 3 cut(s) 185, 508, 557
PpsI GAGTC 3 cut(s) 185, 508, 557
Psp124BI GAGCTC 1 cut(s) 383
Psp1406I AACGTT 1 cut(s) 428
PspFI CCCAGC 1 cut(s) 129
PspN4I GGNNCC 1 cut(s) 172
PsuI RGATCY 2 cut(s) 513, 741
PvuII CAGCTG 1 cut(s) 685
RsaI GTAC 3 cut(s) 113, 282, 444
RsaNI GTAC 3 cut(s) 112, 281, 443
SacI GAGCTC 1 cut(s) 383
SalI GTCGAC 1 cut(s) 176
SaqAI TTAA 2 cut(s) 342, 557
SatI GCNGC 3 cut(s) 38, 126, 686
Sau3AI GATC 3 cut(s) 513, 587, 741
SchI GAGTC 3 cut(s) 185, 509, 557
SduI GDGCHC 5 cut(s) 50, 97, 383, 425, 626
Sse9I AATT 4 cut(s) 246, 406, 474, 486
SseBI AGGCCT 1 cut(s) 322
SsiI CCGC 4 cut(s) 38, 55, 126, 181
SspMI CTAG 4 cut(s) 200, 372, 492, 689
SstI GAGCTC 1 cut(s) 383
StuI AGGCCT 1 cut(s) 322
TaaI ACNGT 3 cut(s) 68, 391, 449
TaiI ACGT 4 cut(s) 53, 145, 308, 431
TaqI TCGA 4 cut(s) 44, 75, 177, 237
TasI AATT 4 cut(s) 246, 406, 474, 486
TatI WGTACW 1 cut(s) 442
TauI GCSGC 2 cut(s) 40, 128
TfiI GAWTC 2 cut(s) 603, 693
Tru1I TTAA 2 cut(s) 342, 557
Tru9I TTAA 2 cut(s) 342, 557
TscAI CASTG 2 cut(s) 454, 460
TseFI GTSAC 1 cut(s) 362
TseI GCWGC 1 cut(s) 685
Tsp45I GTSAC 1 cut(s) 362
TspDTI ATGAA 1 cut(s) 145
TspGWI ACGGA 1 cut(s) 163
TspRI CASTG 2 cut(s) 454, 460
XapI RAATTY 1 cut(s) 246
XmiI GTMKAC 1 cut(s) 177
XspI CTAG 4 cut(s) 200, 372, 492, 689
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.