pycom03g17310

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
Physical Location & Seq
Forward (+)
18509046 .. 18518717
9672 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom03g17310.1

Sequence Viewer

Length: 1077 bp
ATGGAAGTATCAGTGTCTAACATTGGTGTTGTTTTGGTGGGCATCATTGTAACTGCATGGGCATGGAGGGTGGTCAACTGGTTATGGCTGAGGCCAAAGAAGCTAGAAAGATATCTGAGGCAGCAAGGCCTTGCCGGAAACTCATACAGGTTTTTGGTAGGAGACTTGAAAGAAAGAACCATGATGCTAAAACAAGCATATTCTAAACCGATGAACCTCTCTCATGACATAGCCCCACGAGTCCTCCCTTTTGAGTACCGCTCGGTGAACACTTACGGTAAGAATTCTTTTATTTGGGCGGGACCAGTACCAAGGGTGAACATTGCTAATCCAGAAGATTTGAAAGACATCCTAACAAAAATTGAGGATTTTCCAAAGTTGAAATCAAATCCATATATCAAGTTGCTAGTATCAGGTACTGCACACCATCAAGGTGAGAAATGGAGAAGACACCGAAGAATTATCAATCCAGCATTCCATTTAGACAAGTTAAAGGGCATGCTACCAGCATTTTACCTAAGTTCTAGTGAGATGATTAAAGAATGGGAGAGCTTGGTGTTGAAAGAAGGTTCATGTGAGTTGGATGTCCGGCCTTGTCTTGAAAATTTGACAGCCGATATGATTTCTCGATCAGCATTTGGAAGTAGCTATAAAGAAGGAAGAAAAATATTTCAACTTTTGAGAGAGCAAGCACAACTTGTAACAAAAGTTATACAAAATGTTTACATTCCGGGATGGAGGTTTCTACCGACCAAGACGAACAAGAAGATGAAAGGAATTGACAGAGAGATAAGAGCGTTACTTATGGGTATTATAAACAAAAGAGAAGAGGCGATTAAGGCAGGTAAAGCCACAAAAGATGACTTGTTGGGTGTGCTTATGGAATCCAACGTGAAGGAAATCAGGGAACATGGCAACAACAAAAAAGTTGGAATGAGTATGCATGATGTGATCGAGGAGTGCAAGCTGTTTTACTTTGCAGGGCAGGAGACCACTTCAGGGTTGCTAGTTTGGACAATGGTTTTGCTAGGTCAATATCAGGACTGGCAATCGATCATGCAAGAGAAGAGGTTATAG

Protein Analysis

359

Amino Acids

41.32

Weight (kDa)

9.66

Isoelectric Point (pI)

40.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 90 - 355 1.5e-32 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000133)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G14610 AT3G14620 AT3G14630 AT3G14630 AT3G14640 AT3G14640 AT3G14650 AT3G14660 AT3G14660 AT3G14660 AT3G14680 AT3G14690 AT3G14690
fragaria_vesca FvH4_1g08410 FvH4_2g31040 FvH4_3g17200 FvH4_3g17200 FvH4_3g17220 FvH4_3g17220 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17260 FvH4_3g17260 FvH4_3g17263 FvH4_3g17264 FvH4_3g17265 FvH4_3g17266 FvH4_5g18530 FvH4_5g19690 FvH4_7g03990 FvH4_7g03990 FvH4_7g03990 FvH4_7g03990 FvH4_7g03990 FvH4_7g17900 FvH4_7g17900
malus_domestica MD02G1088200.v1.1 MD03G1224800.v1.1 MD03G1224900.v1.1 MD03G1225000.v1.1 MD11G1274100.v1.1 MD11G1274200.v1.1 MD11G1274300.v1.1 MD11G1274500.v1.1 MD11G1274600.v1.1 MD15G1050400.v1.1 MD15G1050500.v1.1 MD15G1050600.v1.1 MD15G1050700.v1.1
prunus_persica Prupe.1G404900_v2.0.a1 Prupe.1G404900_v2.0.a1 Prupe.4G152600_v2.0.a1 Prupe.4G152700_v2.0.a1 Prupe.4G152800_v2.0.a1 Prupe.4G152900_v2.0.a1 Prupe.4G153000_v2.0.a1 Prupe.7G201400_v2.0.a1 Prupe.7G201400_v2.0.a1
pyrus_communis pycom03g17310 pycom03g17330 pycom11g21520 pycom11g21600 pycom11g24180 pycom11g24190 pycom11g24200 pycom11g24210 pycom15g04890
rosa_chinensis RchiOBHm_Chr1g0327671 RchiOBHm_Chr1g0327711 RchiOBHm_Chr1g0327721 RchiOBHm_Chr2g0094501 RchiOBHm_Chr5g0028601 RchiOBHm_Chr5g0028611 RchiOBHm_Chr5g0028621 RchiOBHm_Chr5g0028661 RchiOBHm_Chr5g0028671 RchiOBHm_Chr5g0028701 RchiOBHm_Chr5g0028721 RchiOBHm_Chr5g0028741 RchiOBHm_Chr5g0028751 RchiOBHm_Chr5g0028771 RchiOBHm_Chr5g0028821 RchiOBHm_Chr6g0311761 RchiOBHm_Chr7g0204421
rosa_laevigata RLG00000003223 RLG00000003462 RLG00000010376 RLG00000012452 RLG00000016496 RLG00000018531 RLG00000018532 RLG00000018536 RLG00000029973 RLG00000029976 RLG00000033105 RLG00000033106 RLG00000033107 RLG00000033109 RLG00000033110 RLG00000033111 RLG00000033112 RLG00000033113 RLG00000033114 RLG00000033116 RLG00000033124
rosa_multiflora Rmu_co8029584.1_g000001 Rmu_co8159878.1_g000001 Rmu_co8310611.1_g000001 Rmu_sc0001000.1_g000004 Rmu_sc0001000.1_g000016 Rmu_sc0001575.1_g000020 Rmu_sc0001575.1_g000021 Rmu_sc0001575.1_g000022 Rmu_sc0001575.1_g000027 Rmu_sc0001575.1_g000035 Rmu_sc0001575.1_g000040 Rmu_sc0002888.1_g000039 Rmu_sc0003951.1_g000001 Rmu_sc0004359.1_g000045 Rmu_sc0005178.1_g000001 Rmu_sc0005178.1_g000002 Rmu_sc0005178.1_g000004 Rmu_sc0023855.1_g000001 Rmu_sc0024393.1_g000001 Rmu_sc0035326.1_g000001
rosa_roxburghii Rroxscaffold_1G00051080 Rroxscaffold_1G00051100 Rroxscaffold_1G00051110 Rroxscaffold_1G00051120 Rroxscaffold_1G00051150 Rroxscaffold_1G00051160 Rroxscaffold_1G00051170 Rroxscaffold_1G00051180 Rroxscaffold_2G00123610 Rroxscaffold_2G00147120 Rroxscaffold_3G00250540 Rroxscaffold_3G00253110 Rroxscaffold_3G00253120 Rroxscaffold_4G00322410 Rroxscaffold_4G00322440 Rroxscaffold_4G00322470 Rroxscaffold_7G00157330
rosa_rugosa Rorug01G0069500 Rorug01G0069600 Rorug01G0069700 Rorug02G0044200 Rorug02G0227700 Rorug05G0109800 Rorug05G0109900 Rorug05G0110000 Rorug05G0110100 Rorug05G0110300 Rorug05G0110400 Rorug05G0110500 Rorug07G0083800 Rorug07G0083900.1 Rorug07G0103700
rosa_samantha Rh1BG069000 Rh1BG069100 Rh1BG069200 Rh1CG084000 Rh1DG090700 Rh1DG090800 Rh1DG090900 Rh2AG092500 Rh2DG091600 Rh2DG309400 Rh5AG202100 Rh5AG202200 Rh5AG202500 Rh5AG202800 Rh5AG202900 Rh5CG220600 Rh5CG220700 Rh5CG220800 Rh5CG220900 Rh5CG221600 Rh5CG221900 Rh5CG222000 Rh5CG222100 Rh5DG203300 Rh5DG203400 Rh5DG203500 Rh5DG204100 Rh5DG204300 Rh5DG204400 Rh5DG204600 Rh6BG517600 Rh6CG523400 Rh6DG509100 Rh7AG213600 Rh7BG211400 Rh7DG220800
rosa_wichuraiana Rw0G010630 Rw1G006750 Rw1G006770 Rw5G018300 Rw5G018310 Rw5G018330 Rw6G044090 Rw7G018510 Rw7G020290

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 815
Acc36I ACCTGC 1 cut(s) 833
AccBSI CCGCTC 1 cut(s) 261
AciI CCGC 2 cut(s) 259, 299
AcsI RAATTY 2 cut(s) 283, 604
AcuI CTGAAG 1 cut(s) 981
AfaI GTAC 3 cut(s) 257, 309, 418
AfiI CCNNNNNNNGG 1 cut(s) 999
AgsI TTSAA 6 cut(s) 169, 343, 382, 562, 602, 674
AluBI AGCT 4 cut(s) 103, 552, 648, 967
AluI AGCT 4 cut(s) 103, 552, 648, 967
Alw26I GTCTC 2 cut(s) 156, 983
AlwNI CAGNNNCTG 1 cut(s) 419
AoxI GGCC 3 cut(s) 92, 127, 590
ApeKI GCWGC 1 cut(s) 121
ApoI RAATTY 2 cut(s) 283, 604
ArsI GACNNNNNNTTYG 2 cut(s) 1006, 1038
AspS9I GGNCC 1 cut(s) 302
AsuC2I CCSGG 1 cut(s) 732
AsuHPI GGTGA 3 cut(s) 277, 328, 446
AvaII GGWCC 1 cut(s) 302
BauI CACGAG 1 cut(s) 237
BbsI GAAGAC 1 cut(s) 454
BbvCI CCTCAGC 1 cut(s) 89
BbvI GCAGC 1 cut(s) 133
BccI CCATC 2 cut(s) 435, 729
BcnI CCSGG 1 cut(s) 732
BcoDI GTCTC 2 cut(s) 156, 983
BfaI CTAG 5 cut(s) 104, 407, 525, 1007, 1028
BfuAI ACCTGC 1 cut(s) 833
BisI GCNGC 1 cut(s) 122
BlsI GCNGC 1 cut(s) 123
Bme1390I CCNGG 1 cut(s) 732
Bme18I GGWCC 1 cut(s) 302
BmgT120I GGNCC 1 cut(s) 302
BmiI GGNNCC 1 cut(s) 303
BmrFI CCNGG 1 cut(s) 732
BmsI GCATC 2 cut(s) 51, 174
BpiI GAAGAC 1 cut(s) 454
BplI GAGNNNNNCTC 2 cut(s) 245, 277
Bpu10I CCTNAGC 1 cut(s) 89
BpuMI CCSGG 1 cut(s) 732
Bsa29I ATCGAT 1 cut(s) 1052
BsaI GGTCTC 1 cut(s) 983
BsaJI CCNNGG 1 cut(s) 311
BsaXI ACNNNNNCTCC 2 cut(s) 228, 258
Bsc4I CCNNNNNNNGG 1 cut(s) 999
Bse1I ACTGG 3 cut(s) 83, 305, 1049
Bse3DI GCAATG 1 cut(s) 321
BseCI ATCGAT 1 cut(s) 1052
BseDI CCNNGG 1 cut(s) 311
BseGI GGATG 3 cut(s) 348, 589, 740
BseLI CCNNNNNNNGG 1 cut(s) 999
BseMI GCAATG 1 cut(s) 321
BseMII CTCAG 2 cut(s) 80, 107
BseNI ACTGG 3 cut(s) 83, 305, 1049
BseRI GAGGAG 1 cut(s) 971
BseXI GCAGC 1 cut(s) 133
BsgI GTGCAG 1 cut(s) 405
BshFI GGCC 3 cut(s) 94, 129, 592
BshVI ATCGAT 1 cut(s) 1052
BsiSI CCGG 3 cut(s) 135, 589, 731
BslFI GGGAC 1 cut(s) 315
BslI CCNNNNNNNGG 1 cut(s) 999
BsmAI GTCTC 2 cut(s) 156, 983
BsmFI GGGAC 1 cut(s) 315
BsmI GAATGC 1 cut(s) 473
BsnI GGCC 3 cut(s) 94, 129, 592
Bso31I GGTCTC 1 cut(s) 983
Bsp143I GATC 3 cut(s) 629, 951, 1053
BspACI CCGC 2 cut(s) 259, 299
BspANI GGCC 3 cut(s) 94, 129, 592
BspCNI CTCAG 2 cut(s) 81, 108
BspDI ATCGAT 1 cut(s) 1052
BspHI TCATGA 1 cut(s) 223
BspLI GGNNCC 1 cut(s) 303
BspMI ACCTGC 1 cut(s) 833
BspTNI GGTCTC 1 cut(s) 983
BsrBI CCGCTC 1 cut(s) 261
BsrDI GCAATG 1 cut(s) 321
BsrI ACTGG 3 cut(s) 83, 305, 1049
BssECI CCNNGG 1 cut(s) 311
BssMI GATC 3 cut(s) 629, 951, 1053
BssSI CACGAG 1 cut(s) 237
BssT1I CCWWGG 1 cut(s) 311
Bst2BI CACGAG 1 cut(s) 237
Bst4CI ACNGT 1 cut(s) 278
Bst6I CTCTTC 2 cut(s) 822, 1061
BstC8I GCNNGC 3 cut(s) 500, 690, 965
BstDEI CTNAG 3 cut(s) 89, 116, 518
BstF5I GGATG 3 cut(s) 348, 589, 740
BstKTI GATC 3 cut(s) 632, 954, 1056
BstMAI GTCTC 2 cut(s) 156, 983
BstMBI GATC 3 cut(s) 629, 951, 1053
BstMWI GCNNNNNNNGC 3 cut(s) 100, 839, 848
BstNSI RCATGY 1 cut(s) 502
BstSCI CCNGG 1 cut(s) 730
BstV1I GCAGC 1 cut(s) 133
BstV2I GAAGAC 1 cut(s) 454
Bsu15I ATCGAT 1 cut(s) 1052
BsuRI GGCC 3 cut(s) 94, 129, 592
BsuTUI ATCGAT 1 cut(s) 1052
BtsCI GGATG 3 cut(s) 348, 589, 740
BtsIMutI CAGTG 1 cut(s) 18
BveI ACCTGC 1 cut(s) 833
Cac8I GCNNGC 3 cut(s) 500, 690, 965
CaiI CAGNNNCTG 1 cut(s) 419
CciI TCATGA 1 cut(s) 223
Cfr13I GGNCC 1 cut(s) 302
ClaI ATCGAT 1 cut(s) 1052
Csp6I GTAC 3 cut(s) 256, 308, 417
CviAII CATG 9 cut(s) 57, 63, 181, 224, 499, 573, 911, 944, 1057
CviQI GTAC 3 cut(s) 256, 308, 417
DdeI CTNAG 3 cut(s) 89, 116, 518
DpnI GATC 3 cut(s) 631, 953, 1055
DpnII GATC 3 cut(s) 629, 951, 1053
Eam1104I CTCTTC 2 cut(s) 822, 1061
EarI CTCTTC 2 cut(s) 822, 1061
Eco130I CCWWGG 1 cut(s) 311
Eco147I AGGCCT 1 cut(s) 129
Eco31I GGTCTC 1 cut(s) 983
Eco32I GATATC 1 cut(s) 113
Eco47I GGWCC 1 cut(s) 302
Eco57I CTGAAG 1 cut(s) 981
EcoRI GAATTC 1 cut(s) 283
EcoRV GATATC 1 cut(s) 113
EcoT14I CCWWGG 1 cut(s) 311
EcoT22I ATGCAT 1 cut(s) 945
ErhI CCWWGG 1 cut(s) 311
FaeI CATG 9 cut(s) 60, 66, 184, 227, 502, 576, 914, 947, 1060
FalI AAGNNNNNCTT 2 cut(s) 681, 713
FaqI GGGAC 1 cut(s) 315
FatI CATG 9 cut(s) 56, 62, 180, 223, 498, 572, 910, 943, 1056
FauI CCCGC 1 cut(s) 292
Fnu4HI GCNGC 1 cut(s) 122
FokI GGATG 3 cut(s) 335, 596, 747
Fsp4HI GCNGC 1 cut(s) 122
FspBI CTAG 5 cut(s) 104, 407, 525, 1007, 1028
GluI GCNGC 1 cut(s) 122
HaeIII GGCC 3 cut(s) 94, 129, 592
HapII CCGG 3 cut(s) 135, 589, 731
Hin1II CATG 9 cut(s) 60, 66, 184, 227, 502, 576, 914, 947, 1060
HincII GTYRAC 1 cut(s) 76
HindII GTYRAC 1 cut(s) 76
HinfI GANTC 2 cut(s) 240, 884
HpaII CCGG 3 cut(s) 135, 589, 731
HphI GGTGA 3 cut(s) 277, 328, 446
Hpy166II GTNNAC 4 cut(s) 76, 268, 319, 724
Hpy188I TCNGA 1 cut(s) 117
Hpy188III TCNNGA 5 cut(s) 224, 332, 599, 627, 1040
Hpy8I GTNNAC 4 cut(s) 76, 268, 319, 724
HpyAV CCTTC 3 cut(s) 560, 650, 889
HpyCH4III ACNGT 1 cut(s) 278
HpyCH4IV ACGT 1 cut(s) 891
HpyCH4V TGCA 6 cut(s) 56, 422, 943, 963, 980, 1060
HpyF10VI GCNNNNNNNGC 3 cut(s) 100, 839, 848
HpyF3I CTNAG 3 cut(s) 89, 116, 518
HpySE526I ACGT 1 cut(s) 891
Hsp92II CATG 9 cut(s) 60, 66, 184, 227, 502, 576, 914, 947, 1060
Kzo9I GATC 3 cut(s) 629, 951, 1053
Lsp1109I GCAGC 1 cut(s) 133
LweI GCATC 2 cut(s) 51, 174
MaeI CTAG 5 cut(s) 104, 407, 525, 1007, 1028
MaeII ACGT 1 cut(s) 891
MaeIII GTNAC 3 cut(s) 49, 700, 798
MalI GATC 3 cut(s) 631, 953, 1055
MbiI CCGCTC 1 cut(s) 261
MboI GATC 3 cut(s) 629, 951, 1053
MboII GAAGA 6 cut(s) 347, 459, 468, 672, 778, 839
MluCI AATT 5 cut(s) 283, 360, 459, 604, 777
MlyI GAGTC 1 cut(s) 249
MmeI TCCRAC 3 cut(s) 561, 910, 912
Mph1103I ATGCAT 1 cut(s) 945
MseI TTAA 3 cut(s) 491, 537, 837
MslI CAYNNNNRTG 2 cut(s) 61, 432
MspI CCGG 3 cut(s) 135, 589, 731
MspR9I CCNGG 1 cut(s) 732
Mva1269I GAATGC 1 cut(s) 473
MwoI GCNNNNNNNGC 3 cut(s) 100, 839, 848
NciI CCSGG 1 cut(s) 732
NdeII GATC 3 cut(s) 629, 951, 1053
NlaIII CATG 9 cut(s) 60, 66, 184, 227, 502, 576, 914, 947, 1060
NlaIV GGNNCC 1 cut(s) 303
NsiI ATGCAT 1 cut(s) 945
NspI RCATGY 1 cut(s) 502
PaeI GCATGC 1 cut(s) 502
PagI TCATGA 1 cut(s) 223
PceI AGGCCT 1 cut(s) 129
PctI GAATGC 1 cut(s) 473
PfeI GAWTC 1 cut(s) 884
PfoI TCCNGGA 1 cut(s) 730
PkrI GCNGC 1 cut(s) 123
PleI GAGTC 1 cut(s) 248
PpsI GAGTC 1 cut(s) 248
PsiI TTATAA 1 cut(s) 815
PspN4I GGNNCC 1 cut(s) 303
PspPI GGNCC 1 cut(s) 302
PstNI CAGNNNCTG 1 cut(s) 419
RsaI GTAC 3 cut(s) 257, 309, 418
RsaNI GTAC 3 cut(s) 256, 308, 417
RseI CAYNNNNRTG 2 cut(s) 61, 432
SaqAI TTAA 3 cut(s) 491, 537, 837
SatI GCNGC 1 cut(s) 122
Sau3AI GATC 3 cut(s) 629, 951, 1053
Sau96I GGNCC 1 cut(s) 302
SchI GAGTC 1 cut(s) 249
ScrFI CCNGG 1 cut(s) 732
SfaNI GCATC 2 cut(s) 51, 174
SinI GGWCC 1 cut(s) 302
SmiMI CAYNNNNRTG 2 cut(s) 61, 432
SphI GCATGC 1 cut(s) 502
Sse9I AATT 5 cut(s) 283, 360, 459, 604, 777
SseBI AGGCCT 1 cut(s) 129
SsiI CCGC 2 cut(s) 259, 299
SspI AATATT 1 cut(s) 669
SspMI CTAG 5 cut(s) 104, 407, 525, 1007, 1028
StuI AGGCCT 1 cut(s) 129
StyD4I CCNGG 1 cut(s) 730
StyI CCWWGG 1 cut(s) 311
TaaI ACNGT 1 cut(s) 278
TaiI ACGT 1 cut(s) 894
TaqI TCGA 3 cut(s) 628, 954, 1052
TasI AATT 5 cut(s) 283, 360, 459, 604, 777
TfiI GAWTC 1 cut(s) 884
Tru1I TTAA 3 cut(s) 491, 537, 837
Tru9I TTAA 3 cut(s) 491, 537, 837
TscAI CASTG 1 cut(s) 18
TseI GCWGC 1 cut(s) 121
TspDTI ATGAA 3 cut(s) 227, 561, 785
TspRI CASTG 1 cut(s) 18
VpaK11BI GGWCC 1 cut(s) 302
XapI RAATTY 2 cut(s) 283, 604
XceI RCATGY 1 cut(s) 502
XspI CTAG 5 cut(s) 104, 407, 525, 1007, 1028
Zsp2I ATGCAT 1 cut(s) 945
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.