MD15G1050500.v1.1

Cytochrome p450

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
Physical Location & Seq
Reverse (-)
3444510 .. 3446397
1888 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1050500.v1.1.491

Sequence Viewer

Length: 837 bp
ATGGAAGATTATCTTATTTTTATCAAAACGTTGGTATTCTCCTTGGTTTCTGTTATTCTTGTTTCTGTTCCGAGAGTTGTTCATGTCCACTGGTTTAGACCCAGGAGCCTGGGGAAGCAGTTGAGAAAGCAAGGGATCAGAGGCAGATCTTACAGGCTTTTCCAGGATGACATGAAAGAGATTAGCATGTCCAGCAAGGAAACCTGGTCCAAACCCATGTCCCTCAACCACCAGATTGCTCCACGTGTCTTTCGATTTTTTCATCAAATAGTGCAGAATTATGTTGAACATGAAGGAAGATGTGAACTAGATGTAGCTCCTGAATTTCGAAACCTTGCTAGTGATTTTATAACTAGAACAGCCTTTGGAAGCAACTGCGAAGAGGGGAAGAAAATACTTGAGCTTCAAAAAAAGCAAGCTGTTTTAGTGCTTGAAGCCTACTATGATTTCTATTTTCCAGGCAAAAGGCATAATGCTACGTACTTATTAAAACTAACAACATTTTATCATGTAGTTTTTATCTGCACATTACTTTTTAGGCTAGCGACATTATGTTCTCGCTTTGTTAGAGCATGTCTTGATTTCAAATTTCATGGACATTTGTTAAACCTAGATAGTTTTCTCTCTCGACACATATTCAAACCCACTAAAAAGAACAGGATGAGGTACAAGTTGGACAACGAAACCAAAGCAATATTAAAGGGTACGATTATCAAGAAAGAGCAAGCAGCCATGGAAAATGGGGATGAGGCTGCAAATGATTTGCTGGGCTTACTATTACAATGCAACGAACAAGAGCAAACTAGCATGACAATTGAGGATGTCATAGAGGAGTGA

Protein Analysis

279

Amino Acids

32.57

Weight (kDa)

9.13

Isoelectric Point (pI)

43.71

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000133)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G14610 AT3G14620 AT3G14630 AT3G14630 AT3G14640 AT3G14640 AT3G14650 AT3G14660 AT3G14660 AT3G14660 AT3G14680 AT3G14690 AT3G14690
fragaria_vesca FvH4_1g08410 FvH4_2g31040 FvH4_3g17200 FvH4_3g17200 FvH4_3g17220 FvH4_3g17220 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17260 FvH4_3g17260 FvH4_3g17263 FvH4_3g17264 FvH4_3g17265 FvH4_3g17266 FvH4_5g18530 FvH4_5g19690 FvH4_7g03990 FvH4_7g03990 FvH4_7g03990 FvH4_7g03990 FvH4_7g03990 FvH4_7g17900 FvH4_7g17900
malus_domestica MD02G1088200.v1.1 MD03G1224800.v1.1 MD03G1224900.v1.1 MD03G1225000.v1.1 MD11G1274100.v1.1 MD11G1274200.v1.1 MD11G1274300.v1.1 MD11G1274500.v1.1 MD11G1274600.v1.1 MD15G1050400.v1.1 MD15G1050500.v1.1 MD15G1050600.v1.1 MD15G1050700.v1.1
prunus_persica Prupe.1G404900_v2.0.a1 Prupe.1G404900_v2.0.a1 Prupe.4G152600_v2.0.a1 Prupe.4G152700_v2.0.a1 Prupe.4G152800_v2.0.a1 Prupe.4G152900_v2.0.a1 Prupe.4G153000_v2.0.a1 Prupe.7G201400_v2.0.a1 Prupe.7G201400_v2.0.a1
pyrus_communis pycom03g17310 pycom03g17330 pycom11g21520 pycom11g21600 pycom11g24180 pycom11g24190 pycom11g24200 pycom11g24210 pycom15g04890
rosa_chinensis RchiOBHm_Chr1g0327671 RchiOBHm_Chr1g0327711 RchiOBHm_Chr1g0327721 RchiOBHm_Chr2g0094501 RchiOBHm_Chr5g0028601 RchiOBHm_Chr5g0028611 RchiOBHm_Chr5g0028621 RchiOBHm_Chr5g0028661 RchiOBHm_Chr5g0028671 RchiOBHm_Chr5g0028701 RchiOBHm_Chr5g0028721 RchiOBHm_Chr5g0028741 RchiOBHm_Chr5g0028751 RchiOBHm_Chr5g0028771 RchiOBHm_Chr5g0028821 RchiOBHm_Chr6g0311761 RchiOBHm_Chr7g0204421
rosa_laevigata RLG00000003223 RLG00000003462 RLG00000010376 RLG00000012452 RLG00000016496 RLG00000018531 RLG00000018532 RLG00000018536 RLG00000029973 RLG00000029976 RLG00000033105 RLG00000033106 RLG00000033107 RLG00000033109 RLG00000033110 RLG00000033111 RLG00000033112 RLG00000033113 RLG00000033114 RLG00000033116 RLG00000033124
rosa_multiflora Rmu_co8029584.1_g000001 Rmu_co8159878.1_g000001 Rmu_co8310611.1_g000001 Rmu_sc0001000.1_g000004 Rmu_sc0001000.1_g000016 Rmu_sc0001575.1_g000020 Rmu_sc0001575.1_g000021 Rmu_sc0001575.1_g000022 Rmu_sc0001575.1_g000027 Rmu_sc0001575.1_g000035 Rmu_sc0001575.1_g000040 Rmu_sc0002888.1_g000039 Rmu_sc0003951.1_g000001 Rmu_sc0004359.1_g000045 Rmu_sc0005178.1_g000001 Rmu_sc0005178.1_g000002 Rmu_sc0005178.1_g000004 Rmu_sc0023855.1_g000001 Rmu_sc0024393.1_g000001 Rmu_sc0035326.1_g000001
rosa_roxburghii Rroxscaffold_1G00051080 Rroxscaffold_1G00051100 Rroxscaffold_1G00051110 Rroxscaffold_1G00051120 Rroxscaffold_1G00051150 Rroxscaffold_1G00051160 Rroxscaffold_1G00051170 Rroxscaffold_1G00051180 Rroxscaffold_2G00123610 Rroxscaffold_2G00147120 Rroxscaffold_3G00250540 Rroxscaffold_3G00253110 Rroxscaffold_3G00253120 Rroxscaffold_4G00322410 Rroxscaffold_4G00322440 Rroxscaffold_4G00322470 Rroxscaffold_7G00157330
rosa_rugosa Rorug01G0069500 Rorug01G0069600 Rorug01G0069700 Rorug02G0044200 Rorug02G0227700 Rorug05G0109800 Rorug05G0109900 Rorug05G0110000 Rorug05G0110100 Rorug05G0110300 Rorug05G0110400 Rorug05G0110500 Rorug07G0083800 Rorug07G0083900.1 Rorug07G0103700
rosa_samantha Rh1BG069000 Rh1BG069100 Rh1BG069200 Rh1CG084000 Rh1DG090700 Rh1DG090800 Rh1DG090900 Rh2AG092500 Rh2DG091600 Rh2DG309400 Rh5AG202100 Rh5AG202200 Rh5AG202500 Rh5AG202800 Rh5AG202900 Rh5CG220600 Rh5CG220700 Rh5CG220800 Rh5CG220900 Rh5CG221600 Rh5CG221900 Rh5CG222000 Rh5CG222100 Rh5DG203300 Rh5DG203400 Rh5DG203500 Rh5DG204100 Rh5DG204300 Rh5DG204400 Rh5DG204600 Rh6BG517600 Rh6CG523400 Rh6DG509100 Rh7AG213600 Rh7BG211400 Rh7DG220800
rosa_wichuraiana Rw0G010630 Rw1G006750 Rw1G006770 Rw5G018300 Rw5G018310 Rw5G018330 Rw6G044090 Rw7G018510 Rw7G020290

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 350
AclI AACGTT 1 cut(s) 29
AclWI GGATC 1 cut(s) 143
AcsI RAATTY 2 cut(s) 323, 587
AcvI CACGTG 1 cut(s) 245
AfaI GTAC 3 cut(s) 482, 668, 706
AflIII ACRYGT 1 cut(s) 244
AgsI TTSAA 5 cut(s) 287, 407, 434, 586, 640
AjnI CCWGG 5 cut(s) 101, 108, 162, 203, 457
AluBI AGCT 3 cut(s) 317, 403, 419
AluI AGCT 3 cut(s) 317, 403, 419
AlwI GGATC 1 cut(s) 143
ApeKI GCWGC 2 cut(s) 728, 752
ApoI RAATTY 2 cut(s) 323, 587
AspS9I GGNCC 1 cut(s) 207
AsuII TTCGAA 1 cut(s) 328
AsuNHI GCTAGC 1 cut(s) 541
AvaII GGWCC 1 cut(s) 207
BbrPI CACGTG 1 cut(s) 245
BbvI GCAGC 2 cut(s) 739, 740
BciT130I CCWGG 5 cut(s) 103, 110, 164, 205, 459
BfaI CTAG 6 cut(s) 308, 339, 354, 542, 611, 804
BglII AGATCT 1 cut(s) 146
BisI GCNGC 2 cut(s) 729, 753
BlsI GCNGC 2 cut(s) 730, 754
Bme1390I CCNGG 5 cut(s) 103, 110, 164, 205, 459
Bme18I GGWCC 1 cut(s) 207
BmgT120I GGNCC 1 cut(s) 207
BmiI GGNNCC 1 cut(s) 107
BmrFI CCNGG 5 cut(s) 103, 110, 164, 205, 459
BmtI GCTAGC 1 cut(s) 545
Bpu14I TTCGAA 1 cut(s) 328
BpuEI CTTGAG 1 cut(s) 419
BsaAI YACGTR 2 cut(s) 245, 480
BsaJI CCNNGG 4 cut(s) 42, 101, 109, 732
Bse1I ACTGG 1 cut(s) 95
BseBI CCWGG 5 cut(s) 103, 110, 164, 205, 459
BseDI CCNNGG 4 cut(s) 42, 101, 109, 732
BseGI GGATG 4 cut(s) 172, 666, 751, 826
BseNI ACTGG 1 cut(s) 95
BseXI GCAGC 2 cut(s) 739, 740
BseYI CCCAGC 1 cut(s) 766
BsgI GTGCAG 2 cut(s) 293, 508
BslFI GGGAC 1 cut(s) 205
BsmFI GGGAC 1 cut(s) 205
Bsp119I TTCGAA 1 cut(s) 328
Bsp143I GATC 2 cut(s) 135, 146
Bsp19I CCATGG 1 cut(s) 732
BspLI GGNNCC 1 cut(s) 107
BspOI GCTAGC 1 cut(s) 545
BspPI GGATC 1 cut(s) 143
BspT104I TTCGAA 1 cut(s) 328
BsrI ACTGG 1 cut(s) 95
BssECI CCNNGG 4 cut(s) 42, 101, 109, 732
BssMI GATC 2 cut(s) 135, 146
BssT1I CCWWGG 2 cut(s) 42, 732
Bst2UI CCWGG 5 cut(s) 103, 110, 164, 205, 459
Bst6I CTCTTC 1 cut(s) 375
BstBAI YACGTR 2 cut(s) 245, 480
BstBI TTCGAA 1 cut(s) 328
BstC8I GCNNGC 3 cut(s) 417, 543, 726
BstDSI CCRYGG 1 cut(s) 732
BstF5I GGATG 4 cut(s) 172, 666, 751, 826
BstKTI GATC 2 cut(s) 138, 149
BstMBI GATC 2 cut(s) 135, 146
BstMWI GCNNNNNNNGC 1 cut(s) 192
BstNI CCWGG 5 cut(s) 103, 110, 164, 205, 459
BstNSI RCATGY 2 cut(s) 190, 576
BstSCI CCNGG 5 cut(s) 101, 108, 162, 203, 457
BstSNI TACGTA 1 cut(s) 480
BstV1I GCAGC 2 cut(s) 739, 740
BstX2I RGATCY 1 cut(s) 146
BstXI CCANNNNNNTGG 1 cut(s) 109
BstYI RGATCY 1 cut(s) 146
BtgI CCRYGG 1 cut(s) 732
BtsCI GGATG 4 cut(s) 172, 666, 751, 826
BtsIMutI CAGTG 1 cut(s) 88
Cac8I GCNNGC 3 cut(s) 417, 543, 726
Cfr13I GGNCC 1 cut(s) 207
CsiI ACCWGGT 1 cut(s) 203
Csp6I GTAC 3 cut(s) 481, 667, 705
CviQI GTAC 3 cut(s) 481, 667, 705
DpnI GATC 2 cut(s) 137, 148
DpnII GATC 2 cut(s) 135, 146
Eam1104I CTCTTC 1 cut(s) 375
EarI CTCTTC 1 cut(s) 375
Eco105I TACGTA 1 cut(s) 480
Eco130I CCWWGG 2 cut(s) 42, 732
Eco47I GGWCC 1 cut(s) 207
Eco72I CACGTG 1 cut(s) 245
EcoRII CCWGG 5 cut(s) 101, 108, 162, 203, 457
EcoT14I CCWWGG 2 cut(s) 42, 732
ErhI CCWWGG 2 cut(s) 42, 732
FalI AAGNNNNNCTT 1 cut(s) 29
FaqI GGGAC 1 cut(s) 205
Fnu4HI GCNGC 2 cut(s) 729, 753
FokI GGATG 4 cut(s) 179, 673, 758, 833
Fsp4HI GCNGC 2 cut(s) 729, 753
FspBI CTAG 6 cut(s) 308, 339, 354, 542, 611, 804
GluI GCNGC 2 cut(s) 729, 753
GsaI CCCAGC 1 cut(s) 770
Hpy166II GTNNAC 2 cut(s) 88, 305
Hpy188I TCNGA 2 cut(s) 72, 140
Hpy188III TCNNGA 4 cut(s) 320, 578, 627, 715
Hpy8I GTNNAC 2 cut(s) 88, 305
HpyAV CCTTC 1 cut(s) 287
HpyCH4IV ACGT 3 cut(s) 29, 244, 479
HpyCH4V TGCA 4 cut(s) 274, 525, 755, 786
HpyF10VI GCNNNNNNNGC 1 cut(s) 192
HpySE526I ACGT 3 cut(s) 29, 244, 479
Kzo9I GATC 2 cut(s) 135, 146
LmnI GCTCC 3 cut(s) 105, 244, 322
Lsp1109I GCAGC 2 cut(s) 739, 740
MabI ACCWGGT 1 cut(s) 203
MaeI CTAG 6 cut(s) 308, 339, 354, 542, 611, 804
MaeII ACGT 3 cut(s) 29, 244, 479
MalI GATC 2 cut(s) 137, 148
MboI GATC 2 cut(s) 135, 146
MboII GAAGA 4 cut(s) 17, 309, 392, 400
MfeI CAATTG 1 cut(s) 813
MflI RGATCY 1 cut(s) 146
MluCI AATT 4 cut(s) 277, 323, 587, 813
MmeI TCCRAC 1 cut(s) 654
MnlI CCTC 7 cut(s) 134, 233, 376, 657, 742, 811, 823
MseI TTAA 3 cut(s) 488, 605, 698
MspR9I CCNGG 5 cut(s) 103, 110, 164, 205, 459
MunI CAATTG 1 cut(s) 813
MvaI CCWGG 5 cut(s) 103, 110, 164, 205, 459
MwoI GCNNNNNNNGC 1 cut(s) 192
NcoI CCATGG 1 cut(s) 732
NdeII GATC 2 cut(s) 135, 146
NheI GCTAGC 1 cut(s) 541
NlaIV GGNNCC 1 cut(s) 107
NspI RCATGY 2 cut(s) 190, 576
NspV TTCGAA 1 cut(s) 328
PcsI WCGNNNNNNNCGW 1 cut(s) 250
PfoI TCCNGGA 1 cut(s) 162
PkrI GCNGC 2 cut(s) 730, 754
PmaCI CACGTG 1 cut(s) 245
PmlI CACGTG 1 cut(s) 245
Ppu21I YACGTR 2 cut(s) 245, 480
PsiI TTATAA 1 cut(s) 350
Psp1406I AACGTT 1 cut(s) 29
Psp6I CCWGG 5 cut(s) 101, 108, 162, 203, 457
PspCI CACGTG 1 cut(s) 245
PspFI CCCAGC 1 cut(s) 766
PspGI CCWGG 5 cut(s) 101, 108, 162, 203, 457
PspN4I GGNNCC 1 cut(s) 107
PspPI GGNCC 1 cut(s) 207
PsuI RGATCY 1 cut(s) 146
RsaI GTAC 3 cut(s) 482, 668, 706
RsaNI GTAC 3 cut(s) 481, 667, 705
SaqAI TTAA 3 cut(s) 488, 605, 698
SatI GCNGC 2 cut(s) 729, 753
Sau3AI GATC 2 cut(s) 135, 146
Sau96I GGNCC 1 cut(s) 207
ScrFI CCNGG 5 cut(s) 103, 110, 164, 205, 459
SexAI ACCWGGT 1 cut(s) 203
SfuI TTCGAA 1 cut(s) 328
SinI GGWCC 1 cut(s) 207
SmlI CTYRAG 1 cut(s) 398
SmoI CTYRAG 1 cut(s) 398
SnaBI TACGTA 1 cut(s) 480
Sse9I AATT 4 cut(s) 277, 323, 587, 813
SspI AATATT 1 cut(s) 696
SspMI CTAG 6 cut(s) 308, 339, 354, 542, 611, 804
StyD4I CCNGG 5 cut(s) 101, 108, 162, 203, 457
StyI CCWWGG 2 cut(s) 42, 732
TaiI ACGT 3 cut(s) 32, 247, 482
TaqI TCGA 3 cut(s) 253, 328, 628
TasI AATT 4 cut(s) 277, 323, 587, 813
Tru1I TTAA 3 cut(s) 488, 605, 698
Tru9I TTAA 3 cut(s) 488, 605, 698
TscAI CASTG 1 cut(s) 95
TseI GCWGC 2 cut(s) 728, 752
TspDTI ATGAA 5 cut(s) 71, 188, 251, 306, 581
TspRI CASTG 1 cut(s) 95
VpaK11BI GGWCC 1 cut(s) 207
XapI RAATTY 2 cut(s) 323, 587
XceI RCATGY 2 cut(s) 190, 576
XspI CTAG 6 cut(s) 308, 339, 354, 542, 611, 804
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.