Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0000133

Physical Location & Seq

Genomic Coordinates Forward (+)

9831641 .. 9834000

Gene Structure 2360 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0110400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1029 bp

ATGAGTCTAATCGCCGGCTCCTACGAGAAATTCCTATGGGGCTTCAAGCTCAAACCCCAAAACACCGACCCTAATTCCAAAACCCTAACCCTAATCCCCCTCTTCTCCTACCCCTCCCACCTCTCCGCCATCACCTCCGTCGCCACCGCCGGCCCCGCCGCCGCCTCCGGAGGCTCCGACGACACCATCCAGCTCTACGACCTCTCCCACGCCACCTCCGTCGGCTCCCTCAACGACCACGCCGCCACCGTCACCTCCCTCTCCTTCTTCGCCCCTCCCAACCTCCCCGTCCCCCTCAACCTCGTCTCCGGCGACGCCGACGGAACCTTCTGCATCTACGAGGCCGACCCCTTCGTCCTCCTCAAGAGCCTCAAGCCGCACCGCAAGGCCATAAACGACTTGTCGTTGCACCCCTCCGGGAAGCTGGCTTTGACTGTGGGGAAAGATGAGTGCTTGGCGATGATTAACTTGGTGAGGGGGAGGAGGAGCTTTTATTGCAGGTTGGGGAAGGAGGCTAGCTTGGTGGACTTCAATGGGTCCGGGGATAAGTTCTATTTGGCTACTGAGGAGAAAGTGACTGTTCATGAGGCTGAGGATGCCAAATTGGTTTGCGAAATGGAGAATCCGAAAAGGGTTCTTTGTGCTGAGCCCGGCGAGAATGGACTTCTATTTACTGGTGGTGAGGATCGGGGTATTACAGCTTGGGACACAAACACTGGGAAGGTTGCATATCGCATTGAGGATGCACATTCGACCCGCGTTAAGGGGATTGTGGTGTTGAAAAGCAGTTCCGGTGATGTGGACAATGAGGATCCGTATCTTGTAGCATCTGGGTCGTCGGATGGGGTTATACGAGTTTGGGATGTTCGCATGGCTGTTAAGGATAATAAGCCAAATCCCTTAGCTGAGGCTAATACAAAATCAAGGCTTACTTGTCTGGCCGGATCATCTCTTAAATCTTTCAAACAGCCACAGGTTGGAAAAAGAGTTCAGAAAGAAAAGCATGATGCAGCAAAAGATGGCAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004497 GO:0006082 GO:0006629 GO:0006720 GO:0006721 GO:0006722 GO:0008150 GO:0008152 GO:0008299 GO:0008300 GO:0008610 GO:0009056 GO:0009058 GO:0009987 GO:0016042 GO:0016053 GO:0016104 GO:0016105 GO:0016114 GO:0016115 GO:0016491 GO:0016705 GO:0016709 GO:0017144 GO:0019741 GO:0019742 GO:0019745 GO:0019752 GO:0032787 GO:0042180 GO:0042181 GO:0042182 GO:0043436 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044249 GO:0044255 GO:0044281 GO:0044282 GO:0044283 GO:0046394 GO:0055114 GO:0071704 GO:0072330 GO:1901360 GO:1901361 GO:1901362 GO:1901575 GO:1901576 GO:1901615 GO:1901617 GO:1902381 GO:1902382 GO:1902384 GO:1902386

KEGG Pathways

Metabolic & Signaling

ko00908 ko01100 ko01110 ko04726 map00908 map01100 map01110 map04726

Pfam Domains

Protein Families

p450

Protein Analysis

342

Amino Acids

36.79

Weight (kDa)

6.71

Isoelectric Point (pI)

23.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_WDR36-Utp21_1st	PF25171	39 - 154	4.5e-06	WDR36/Utp21 first beta-propeller
Beta-prop_WDR3_1st	PF25173	41 - 157	1.1e-10	WDR3 first beta-propeller domain
Beta-prop_WDR5	PF25175	49 - 161	2.2e-09	WDR5 beta-propeller domain
Beta-prop_THOC3	PF25174	49 - 247	3.6e-14	THOC3 beta-propeller domain
WD40_Prp19	PF24814	50 - 206	3.9e-15	Prp19 WD40 domain
Beta-prop_WDR3_2nd	PF25172	54 - 153	7.2e-06	WDR3 second beta-propeller domain
Beta-prop_WDR5	PF25175	124 - 291	4.2e-11	WDR5 beta-propeller domain
WD40_WDHD1_1st	PF24817	127 - 294	7.5e-08	WDHD1 first WD40 domain
WD40_CDC20-Fz	PF24807	146 - 292	6.6e-08	CDC20/Fizzy WD40 domain
Beta-prop_WDR3_1st	PF25173	192 - 291	1.1e-07	WDR3 first beta-propeller domain
Beta-prop_EML	PF23409	202 - 293	7.7e-07	Echinoderm microtubule-associated protein first beta-propeller
WD40_Prp19	PF24814	215 - 291	5.7e-07	Prp19 WD40 domain
WDR55	PF24796	222 - 292	2.3e-07	WDR55

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

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Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0000133)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G14610 AT3G14620 AT3G14630 AT3G14630 AT3G14640 AT3G14640 AT3G14650 AT3G14660 AT3G14660 AT3G14660 AT3G14680 AT3G14690 AT3G14690
fragaria_vesca	FvH4_1g08410 FvH4_2g31040 FvH4_3g17200 FvH4_3g17200 FvH4_3g17220 FvH4_3g17220 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17260 FvH4_3g17260 FvH4_3g17263 FvH4_3g17264 FvH4_3g17265 FvH4_3g17266 FvH4_5g18530 FvH4_5g19690 FvH4_7g03990 FvH4_7g03990 FvH4_7g03990 FvH4_7g03990 FvH4_7g03990 FvH4_7g17900 FvH4_7g17900
malus_domestica	MD02G1088200.v1.1 MD03G1224800.v1.1 MD03G1224900.v1.1 MD03G1225000.v1.1 MD11G1274100.v1.1 MD11G1274200.v1.1 MD11G1274300.v1.1 MD11G1274500.v1.1 MD11G1274600.v1.1 MD15G1050400.v1.1 MD15G1050500.v1.1 MD15G1050600.v1.1 MD15G1050700.v1.1
prunus_persica	Prupe.1G404900_v2.0.a1 Prupe.1G404900_v2.0.a1 Prupe.4G152600_v2.0.a1 Prupe.4G152700_v2.0.a1 Prupe.4G152800_v2.0.a1 Prupe.4G152900_v2.0.a1 Prupe.4G153000_v2.0.a1 Prupe.7G201400_v2.0.a1 Prupe.7G201400_v2.0.a1
pyrus_communis	pycom03g17310 pycom03g17330 pycom11g21520 pycom11g21600 pycom11g24180 pycom11g24190 pycom11g24200 pycom11g24210 pycom15g04890
rosa_chinensis	RchiOBHm_Chr1g0327671 RchiOBHm_Chr1g0327711 RchiOBHm_Chr1g0327721 RchiOBHm_Chr2g0094501 RchiOBHm_Chr5g0028601 RchiOBHm_Chr5g0028611 RchiOBHm_Chr5g0028621 RchiOBHm_Chr5g0028661 RchiOBHm_Chr5g0028671 RchiOBHm_Chr5g0028701 RchiOBHm_Chr5g0028721 RchiOBHm_Chr5g0028741 RchiOBHm_Chr5g0028751 RchiOBHm_Chr5g0028771 RchiOBHm_Chr5g0028821 RchiOBHm_Chr6g0311761 RchiOBHm_Chr7g0204421
rosa_laevigata	RLG00000003223 RLG00000003462 RLG00000010376 RLG00000012452 RLG00000016496 RLG00000018531 RLG00000018532 RLG00000018536 RLG00000029973 RLG00000029976 RLG00000033105 RLG00000033106 RLG00000033107 RLG00000033109 RLG00000033110 RLG00000033111 RLG00000033112 RLG00000033113 RLG00000033114 RLG00000033116 RLG00000033124
rosa_multiflora	Rmu_co8029584.1_g000001 Rmu_co8159878.1_g000001 Rmu_co8310611.1_g000001 Rmu_sc0001000.1_g000004 Rmu_sc0001000.1_g000016 Rmu_sc0001575.1_g000020 Rmu_sc0001575.1_g000021 Rmu_sc0001575.1_g000022 Rmu_sc0001575.1_g000027 Rmu_sc0001575.1_g000035 Rmu_sc0001575.1_g000040 Rmu_sc0002888.1_g000039 Rmu_sc0003951.1_g000001 Rmu_sc0004359.1_g000045 Rmu_sc0005178.1_g000001 Rmu_sc0005178.1_g000002 Rmu_sc0005178.1_g000004 Rmu_sc0023855.1_g000001 Rmu_sc0024393.1_g000001 Rmu_sc0035326.1_g000001
rosa_roxburghii	Rroxscaffold_1G00051080 Rroxscaffold_1G00051100 Rroxscaffold_1G00051110 Rroxscaffold_1G00051120 Rroxscaffold_1G00051150 Rroxscaffold_1G00051160 Rroxscaffold_1G00051170 Rroxscaffold_1G00051180 Rroxscaffold_2G00123610 Rroxscaffold_2G00147120 Rroxscaffold_3G00250540 Rroxscaffold_3G00253110 Rroxscaffold_3G00253120 Rroxscaffold_4G00322410 Rroxscaffold_4G00322440 Rroxscaffold_4G00322470 Rroxscaffold_7G00157330
rosa_rugosa	Rorug01G0069500 Rorug01G0069600 Rorug01G0069700 Rorug02G0044200 Rorug02G0227700 Rorug05G0109800 Rorug05G0109900 Rorug05G0110000 Rorug05G0110100 Rorug05G0110300 Rorug05G0110400 Rorug05G0110500 Rorug07G0083800 Rorug07G0083900.1 Rorug07G0103700
rosa_samantha	Rh1BG069000 Rh1BG069100 Rh1BG069200 Rh1CG084000 Rh1DG090700 Rh1DG090800 Rh1DG090900 Rh2AG092500 Rh2DG091600 Rh2DG309400 Rh5AG202100 Rh5AG202200 Rh5AG202500 Rh5AG202800 Rh5AG202900 Rh5CG220600 Rh5CG220700 Rh5CG220800 Rh5CG220900 Rh5CG221600 Rh5CG221900 Rh5CG222000 Rh5CG222100 Rh5DG203300 Rh5DG203400 Rh5DG203500 Rh5DG204100 Rh5DG204300 Rh5DG204400 Rh5DG204600 Rh6BG517600 Rh6CG523400 Rh6DG509100 Rh7AG213600 Rh7BG211400 Rh7DG220800
rosa_wichuraiana	Rw0G010630 Rw1G006750 Rw1G006770 Rw5G018300 Rw5G018310 Rw5G018330 Rw6G044090 Rw7G018510 Rw7G020290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	353
Acc36I	ACCTGC	1 cut(s)	489
AccB7I	CCANNNNNTGG	1 cut(s)	977
AccII	CGCG	1 cut(s)	759
AccIII	TCCGGA	1 cut(s)	167
AciI	CCGC	9 cut(s)	126, 147, 156, 159, 162, 243, 377, 382, 757
AclWI	GGATC	4 cut(s)	693, 806, 819, 952
AcoI	YGGCCR	1 cut(s)	939
AcsI	RAATTY	1 cut(s)	29
AcyI	GRCGYC	1 cut(s)	315
AfiI	CCNNNNNNNGG	2 cut(s)	763, 977
AgsI	TTSAA	4 cut(s)	46, 532, 781, 964
AloI	GAACNNNNNNTCC	2 cut(s)	972, 1004
AluBI	AGCT	7 cut(s)	49, 193, 424, 489, 519, 701, 905
AluI	AGCT	7 cut(s)	49, 193, 424, 489, 519, 701, 905
Alw26I	GTCTC	1 cut(s)	310
AlwI	GGATC	4 cut(s)	693, 806, 819, 952
Aor13HI	TCCGGA	1 cut(s)	167
AoxI	GGCC	4 cut(s)	151, 342, 387, 939
ApeKI	GCWGC	1 cut(s)	1010
ApoI	RAATTY	1 cut(s)	29
AspS9I	GGNCC	2 cut(s)	152, 537
AsuC2I	CCSGG	3 cut(s)	418, 541, 651
AsuHPI	GGTGA	5 cut(s)	124, 244, 484, 692, 806
AsuNHI	GCTAGC	1 cut(s)	515
AvaII	GGWCC	1 cut(s)	537
BamHI	GGATCC	1 cut(s)	811
BanII	GRGCYC	1 cut(s)	651
BbvCI	CCTCAGC	2 cut(s)	591, 906
BbvI	GCAGC	1 cut(s)	1022
BccI	CCATC	4 cut(s)	137, 194, 836, 1013
BcgI	CGANNNNNNTGC	2 cut(s)	816, 850
BcnI	CCSGG	3 cut(s)	418, 541, 651
BcoDI	GTCTC	1 cut(s)	310
BfaI	CTAG	1 cut(s)	516
BfuAI	ACCTGC	1 cut(s)	489
BisI	GCNGC	5 cut(s)	159, 162, 243, 377, 1011
BlpI	GCTNAGC	1 cut(s)	645
BlsI	GCNGC	5 cut(s)	160, 163, 244, 378, 1012
Bme1390I	CCNGG	3 cut(s)	418, 541, 651
Bme18I	GGWCC	1 cut(s)	537
BmgT120I	GGNCC	2 cut(s)	152, 537
BmiI	GGNNCC	7 cut(s)	19, 154, 175, 226, 325, 538, 813
BmrFI	CCNGG	3 cut(s)	418, 541, 651
BmrI	ACTGGG	1 cut(s)	726
BmsI	GCATC	5 cut(s)	342, 586, 733, 836, 997
BmtI	GCTAGC	1 cut(s)	519
BmuI	ACTGGG	1 cut(s)	726
Bpu10I	CCTNAGC	3 cut(s)	591, 901, 906
Bpu1102I	GCTNAGC	1 cut(s)	645
BpuEI	CTTGAG	2 cut(s)	347, 356
BpuMI	CCSGG	3 cut(s)	418, 541, 651
BsaBI	GATNNNNATC	1 cut(s)	816
BsaHI	GRCGYC	1 cut(s)	315
BsaJI	CCNNGG	1 cut(s)	540
BsaWI	WCCGGW	2 cut(s)	167, 791
BsaXI	ACNNNNNCTCC	6 cut(s)	188, 200, 218, 230, 290, 320
Bsc4I	CCNNNNNNNGG	2 cut(s)	763, 977
Bse118I	RCCGGY	2 cut(s)	14, 149
Bse1I	ACTGG	2 cut(s)	679, 721
Bse8I	GATNNNNATC	1 cut(s)	816
BseAI	TCCGGA	1 cut(s)	167
BseDI	CCNNGG	1 cut(s)	540
BseGI	GGATG	5 cut(s)	186, 601, 748, 847, 868
BseJI	GATNNNNATC	1 cut(s)	816
BseLI	CCNNNNNNNGG	2 cut(s)	763, 977
BseMII	CTCAG	4 cut(s)	555, 582, 636, 897
BseNI	ACTGG	2 cut(s)	679, 721
BseRI	GAGGAG	4 cut(s)	350, 496, 499, 581
BseXI	GCAGC	1 cut(s)	1022
Bsh1236I	CGCG	1 cut(s)	759
BshFI	GGCC	4 cut(s)	153, 344, 389, 941
BsiSI	CCGG	9 cut(s)	15, 150, 168, 309, 417, 540, 651, 792, 942
BslFI	GGGAC	2 cut(s)	275, 719
BslI	CCNNNNNNNGG	2 cut(s)	763, 977
BsmAI	GTCTC	1 cut(s)	310
BsmBI	CGTCTC	1 cut(s)	310
BsmFI	GGGAC	2 cut(s)	275, 719
BsnI	GGCC	4 cut(s)	153, 344, 389, 941
Bsp1286I	GDGCHC	1 cut(s)	651
Bsp13I	TCCGGA	1 cut(s)	167
Bsp143I	GATC	3 cut(s)	685, 811, 944
Bsp1720I	GCTNAGC	1 cut(s)	645
BspACI	CCGC	9 cut(s)	126, 147, 156, 159, 162, 243, 377, 382, 757
BspANI	GGCC	4 cut(s)	153, 344, 389, 941
BspCNI	CTCAG	4 cut(s)	556, 583, 637, 898
BspEI	TCCGGA	1 cut(s)	167
BspFNI	CGCG	1 cut(s)	759
BspHI	TCATGA	1 cut(s)	583
BspLI	GGNNCC	7 cut(s)	19, 154, 175, 226, 325, 538, 813
BspMI	ACCTGC	1 cut(s)	489
BspOI	GCTAGC	1 cut(s)	519
BspPI	GGATC	4 cut(s)	693, 806, 819, 952
BsrFI	RCCGGY	2 cut(s)	14, 149
BsrI	ACTGG	2 cut(s)	679, 721
BssAI	RCCGGY	2 cut(s)	14, 149
BssECI	CCNNGG	1 cut(s)	540
BssMI	GATC	3 cut(s)	685, 811, 944
BssNI	GRCGYC	1 cut(s)	315
Bst4CI	ACNGT	3 cut(s)	250, 436, 580
Bst6I	CTCTTC	1 cut(s)	107
BstACI	GRCGYC	1 cut(s)	315
BstC8I	GCNNGC	4 cut(s)	16, 151, 426, 517
BstDEI	CTNAG	5 cut(s)	564, 591, 645, 901, 906
BstF5I	GGATG	5 cut(s)	186, 601, 748, 847, 868
BstFNI	CGCG	1 cut(s)	759
BstKTI	GATC	3 cut(s)	688, 814, 947
BstMAI	GTCTC	1 cut(s)	310
BstMBI	GATC	3 cut(s)	685, 811, 944
BstMWI	GCNNNNNNNGC	3 cut(s)	155, 495, 596
BstSCI	CCNGG	3 cut(s)	416, 539, 649
BstUI	CGCG	1 cut(s)	759
BstV1I	GCAGC	1 cut(s)	1022
BstX2I	RGATCY	1 cut(s)	811
BstYI	RGATCY	1 cut(s)	811
BsuRI	GGCC	4 cut(s)	153, 344, 389, 941
BtgZI	GCGATG	1 cut(s)	473
BtsCI	GGATG	5 cut(s)	186, 601, 748, 847, 868
BtsIMutI	CAGTG	1 cut(s)	714
BveI	ACCTGC	1 cut(s)	489
Cac8I	GCNNGC	4 cut(s)	16, 151, 426, 517
CciI	TCATGA	1 cut(s)	583
Cfr10I	RCCGGY	2 cut(s)	14, 149
Cfr13I	GGNCC	2 cut(s)	152, 537
CseI	GACGC	1 cut(s)	323
CviAII	CATG	3 cut(s)	584, 871, 1004
DdeI	CTNAG	5 cut(s)	564, 591, 645, 901, 906
DpnI	GATC	3 cut(s)	687, 813, 946
DpnII	GATC	3 cut(s)	685, 811, 944
DrdI	GACNNNNNNGTC	1 cut(s)	353
DseDI	GACNNNNNNGTC	1 cut(s)	353
EaeI	YGGCCR	1 cut(s)	939
Eam1104I	CTCTTC	1 cut(s)	107
EarI	CTCTTC	1 cut(s)	107
EciI	GGCGGA	1 cut(s)	115
Eco24I	GRGCYC	1 cut(s)	651
Eco47I	GGWCC	1 cut(s)	537
EcoT38I	GRGCYC	1 cut(s)	651
Esp3I	CGTCTC	1 cut(s)	310
FaeI	CATG	3 cut(s)	587, 874, 1007
FaiI	YATR	7 cut(s)	37, 392, 585, 730, 851, 872, 1005
FalI	AAGNNNNNCTT	2 cut(s)	916, 948
FaqI	GGGAC	2 cut(s)	275, 719
FatI	CATG	3 cut(s)	583, 870, 1003
FauI	CCCGC	2 cut(s)	163, 764
Fnu4HI	GCNGC	5 cut(s)	159, 162, 243, 377, 1011
FokI	GGATG	5 cut(s)	173, 608, 755, 854, 875
FriOI	GRGCYC	1 cut(s)	651
Fsp4HI	GCNGC	5 cut(s)	159, 162, 243, 377, 1011
FspBI	CTAG	1 cut(s)	516
GluI	GCNGC	5 cut(s)	159, 162, 243, 377, 1011
HaeIII	GGCC	4 cut(s)	153, 344, 389, 941
HapII	CCGG	9 cut(s)	15, 150, 168, 309, 417, 540, 651, 792, 942
HgaI	GACGC	1 cut(s)	323
Hin1I	GRCGYC	1 cut(s)	315
Hin1II	CATG	3 cut(s)	587, 874, 1007
HinfI	GANTC	2 cut(s)	4, 622
HpaII	CCGG	9 cut(s)	15, 150, 168, 309, 417, 540, 651, 792, 942
HphI	GGTGA	5 cut(s)	124, 244, 484, 692, 806
Hpy166II	GTNNAC	2 cut(s)	526, 802
Hpy188I	TCNGA	4 cut(s)	178, 627, 841, 993
Hpy188III	TCNNGA	3 cut(s)	168, 364, 584
Hpy8I	GTNNAC	2 cut(s)	526, 802
Hpy99I	CGWCG	6 cut(s)	143, 182, 224, 317, 323, 841
HpyAV	CCTTC	5 cut(s)	274, 337, 361, 502, 715
HpyCH4III	ACNGT	3 cut(s)	250, 436, 580
HpyCH4V	TGCA	6 cut(s)	333, 409, 498, 728, 746, 1010
HpyF10VI	GCNNNNNNNGC	3 cut(s)	155, 495, 596
HpyF3I	CTNAG	5 cut(s)	564, 591, 645, 901, 906
Hsp92I	GRCGYC	1 cut(s)	315
Hsp92II	CATG	3 cut(s)	587, 874, 1007
Kpn2I	TCCGGA	1 cut(s)	167
KroI	GCCGGC	2 cut(s)	14, 149
KroNI	GCCGGC	2 cut(s)	16, 151
Kzo9I	GATC	3 cut(s)	685, 811, 944
LmnI	GCTCC	4 cut(s)	23, 179, 230, 486
Lsp1109I	GCAGC	1 cut(s)	1022
LweI	GCATC	5 cut(s)	342, 586, 733, 836, 997
MaeI	CTAG	1 cut(s)	516
MaeIII	GTNAC	2 cut(s)	250, 574
MalI	GATC	3 cut(s)	687, 813, 946
MboI	GATC	3 cut(s)	685, 811, 944
MboII	GAAGA	2 cut(s)	94, 259
MflI	RGATCY	1 cut(s)	811
MhlI	GDGCHC	1 cut(s)	651
MluCI	AATT	3 cut(s)	29, 73, 602
MlyI	GAGTC	1 cut(s)	13
MmeI	TCCRAC	3 cut(s)	201, 819, 958
MroI	TCCGGA	1 cut(s)	167
MroNI	GCCGGC	2 cut(s)	14, 149
MseI	TTAA	4 cut(s)	465, 762, 879, 954
MspI	CCGG	9 cut(s)	15, 150, 168, 309, 417, 540, 651, 792, 942
MspR9I	CCNGG	3 cut(s)	418, 541, 651
MvnI	CGCG	1 cut(s)	759
MwoI	GCNNNNNNNGC	3 cut(s)	155, 495, 596
NaeI	GCCGGC	2 cut(s)	16, 151
NciI	CCSGG	3 cut(s)	418, 541, 651
NdeII	GATC	3 cut(s)	685, 811, 944
NgoMIV	GCCGGC	2 cut(s)	14, 149
NheI	GCTAGC	1 cut(s)	515
NlaIII	CATG	3 cut(s)	587, 874, 1007
NlaIV	GGNNCC	7 cut(s)	19, 154, 175, 226, 325, 538, 813
NmuCI	GTSAC	2 cut(s)	250, 574
PagI	TCATGA	1 cut(s)	583
PcsI	WCGNNNNNNNCGW	3 cut(s)	216, 246, 309
PdiI	GCCGGC	2 cut(s)	16, 151
PfeI	GAWTC	1 cut(s)	622
PflMI	CCANNNNNTGG	1 cut(s)	977
PfoI	TCCNGGA	1 cut(s)	416
PkrI	GCNGC	5 cut(s)	160, 163, 244, 378, 1012
PleI	GAGTC	1 cut(s)	12
PpsI	GAGTC	1 cut(s)	12
PspN4I	GGNNCC	7 cut(s)	19, 154, 175, 226, 325, 538, 813
PspPI	GGNCC	2 cut(s)	152, 537
PsuI	RGATCY	1 cut(s)	811
SaqAI	TTAA	4 cut(s)	465, 762, 879, 954
SatI	GCNGC	5 cut(s)	159, 162, 243, 377, 1011
Sau3AI	GATC	3 cut(s)	685, 811, 944
Sau96I	GGNCC	2 cut(s)	152, 537
SchI	GAGTC	1 cut(s)	13
ScrFI	CCNGG	3 cut(s)	418, 541, 651
SduI	GDGCHC	1 cut(s)	651
SfaNI	GCATC	5 cut(s)	342, 586, 733, 836, 997
SinI	GGWCC	1 cut(s)	537
SmlI	CTYRAG	2 cut(s)	362, 371
SmoI	CTYRAG	2 cut(s)	362, 371
Sse9I	AATT	3 cut(s)	29, 73, 602
SsiI	CCGC	9 cut(s)	126, 147, 156, 159, 162, 243, 377, 382, 757
SspMI	CTAG	1 cut(s)	516
StyD4I	CCNGG	3 cut(s)	416, 539, 649
TaaI	ACNGT	3 cut(s)	250, 436, 580
TaqI	TCGA	1 cut(s)	752
TasI	AATT	3 cut(s)	29, 73, 602
TauI	GCSGC	4 cut(s)	161, 164, 245, 379
TfiI	GAWTC	1 cut(s)	622
Tru1I	TTAA	4 cut(s)	465, 762, 879, 954
Tru9I	TTAA	4 cut(s)	465, 762, 879, 954
TscAI	CASTG	1 cut(s)	721
TseFI	GTSAC	2 cut(s)	250, 574
TseI	GCWGC	1 cut(s)	1010
Tsp45I	GTSAC	2 cut(s)	250, 574
TspDTI	ATGAA	1 cut(s)	572
TspGWI	ACGGA	4 cut(s)	127, 208, 336, 804
TspRI	CASTG	1 cut(s)	721
Van91I	CCANNNNNTGG	1 cut(s)	977
VpaK11BI	GGWCC	1 cut(s)	537
XapI	RAATTY	1 cut(s)	29
XspI	CTAG	1 cut(s)	516

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.