pycom11g24210

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
Physical Location & Seq
Reverse (-)
27185498 .. 27186654
1157 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g24210.3

Sequence Viewer

Length: 750 bp
ATGGAACTTTCCATAGAGCCTTTTAGTGTCGTTCTAAGTGTTGTTTTGGTTAGCATAGTTGCATGCGCATGGAGGGTGCTGAATTGGGTGTGGTTGAGGCCAAAGGACCTAGAAAAATGTCTGAGGCAGCAAGGACTTGCGGGAAATTCATACAGGCTTTGGTCAGGAGACCTGAGAGAAAGCTCCATAATGCTAAAAGAAGCAATGTCTAAACCCATGAACCTCTCCCACGATACAGCGCCACGAGTCCTCCCTTTTGTCCACCAATCTGTGAGCACTTATGGTAAGAATTCTTTTATGTGGATTGGCCCAACGCCAAGGGTTAATATCACAAATCCAGAAGATTTGAAAGACATCTTTACAAAGCACGAGGATTTTCCAAAGCCAGCACTAAATCCGCTAGTCAAGTTGTTAGCAACAGGTCTAGCAAACTATGAAGGTGATAAATGGGCAAAACACCGAAGAATTGTTAACCCAGCATTCCATTCAGAGAAGCTAAAGCGTATGTTACCGTCATTTTATCAAAGTTGTAGCGAGATGATTGAGGAATGGGAGAGCTTGGTGTCCAAAGACAGTTCATGTGAGTTAGATGTCTGGCCTTATCTTCAAAATGTGACAGCCGATGTAATTTCACGAACATCATTTGGAAGTAGCTACAAAGAAGGAAGGGAAATATTTCAACTCCTGAAAGTGCAAACCGAACTTACAATAAAAACGATACAAAGTGTTTACATTCCAGGATGGAGGTAA

Protein Analysis

250

Amino Acids

28.59

Weight (kDa)

8.59

Isoelectric Point (pI)

47.43

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000133)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G14610 AT3G14620 AT3G14630 AT3G14630 AT3G14640 AT3G14640 AT3G14650 AT3G14660 AT3G14660 AT3G14660 AT3G14680 AT3G14690 AT3G14690
fragaria_vesca FvH4_1g08410 FvH4_2g31040 FvH4_3g17200 FvH4_3g17200 FvH4_3g17220 FvH4_3g17220 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17260 FvH4_3g17260 FvH4_3g17263 FvH4_3g17264 FvH4_3g17265 FvH4_3g17266 FvH4_5g18530 FvH4_5g19690 FvH4_7g03990 FvH4_7g03990 FvH4_7g03990 FvH4_7g03990 FvH4_7g03990 FvH4_7g17900 FvH4_7g17900
malus_domestica MD02G1088200.v1.1 MD03G1224800.v1.1 MD03G1224900.v1.1 MD03G1225000.v1.1 MD11G1274100.v1.1 MD11G1274200.v1.1 MD11G1274300.v1.1 MD11G1274500.v1.1 MD11G1274600.v1.1 MD15G1050400.v1.1 MD15G1050500.v1.1 MD15G1050600.v1.1 MD15G1050700.v1.1
prunus_persica Prupe.1G404900_v2.0.a1 Prupe.1G404900_v2.0.a1 Prupe.4G152600_v2.0.a1 Prupe.4G152700_v2.0.a1 Prupe.4G152800_v2.0.a1 Prupe.4G152900_v2.0.a1 Prupe.4G153000_v2.0.a1 Prupe.7G201400_v2.0.a1 Prupe.7G201400_v2.0.a1
pyrus_communis pycom03g17310 pycom03g17330 pycom11g21520 pycom11g21600 pycom11g24180 pycom11g24190 pycom11g24200 pycom11g24210 pycom15g04890
rosa_chinensis RchiOBHm_Chr1g0327671 RchiOBHm_Chr1g0327711 RchiOBHm_Chr1g0327721 RchiOBHm_Chr2g0094501 RchiOBHm_Chr5g0028601 RchiOBHm_Chr5g0028611 RchiOBHm_Chr5g0028621 RchiOBHm_Chr5g0028661 RchiOBHm_Chr5g0028671 RchiOBHm_Chr5g0028701 RchiOBHm_Chr5g0028721 RchiOBHm_Chr5g0028741 RchiOBHm_Chr5g0028751 RchiOBHm_Chr5g0028771 RchiOBHm_Chr5g0028821 RchiOBHm_Chr6g0311761 RchiOBHm_Chr7g0204421
rosa_laevigata RLG00000003223 RLG00000003462 RLG00000010376 RLG00000012452 RLG00000016496 RLG00000018531 RLG00000018532 RLG00000018536 RLG00000029973 RLG00000029976 RLG00000033105 RLG00000033106 RLG00000033107 RLG00000033109 RLG00000033110 RLG00000033111 RLG00000033112 RLG00000033113 RLG00000033114 RLG00000033116 RLG00000033124
rosa_multiflora Rmu_co8029584.1_g000001 Rmu_co8159878.1_g000001 Rmu_co8310611.1_g000001 Rmu_sc0001000.1_g000004 Rmu_sc0001000.1_g000016 Rmu_sc0001575.1_g000020 Rmu_sc0001575.1_g000021 Rmu_sc0001575.1_g000022 Rmu_sc0001575.1_g000027 Rmu_sc0001575.1_g000035 Rmu_sc0001575.1_g000040 Rmu_sc0002888.1_g000039 Rmu_sc0003951.1_g000001 Rmu_sc0004359.1_g000045 Rmu_sc0005178.1_g000001 Rmu_sc0005178.1_g000002 Rmu_sc0005178.1_g000004 Rmu_sc0023855.1_g000001 Rmu_sc0024393.1_g000001 Rmu_sc0035326.1_g000001
rosa_roxburghii Rroxscaffold_1G00051080 Rroxscaffold_1G00051100 Rroxscaffold_1G00051110 Rroxscaffold_1G00051120 Rroxscaffold_1G00051150 Rroxscaffold_1G00051160 Rroxscaffold_1G00051170 Rroxscaffold_1G00051180 Rroxscaffold_2G00123610 Rroxscaffold_2G00147120 Rroxscaffold_3G00250540 Rroxscaffold_3G00253110 Rroxscaffold_3G00253120 Rroxscaffold_4G00322410 Rroxscaffold_4G00322440 Rroxscaffold_4G00322470 Rroxscaffold_7G00157330
rosa_rugosa Rorug01G0069500 Rorug01G0069600 Rorug01G0069700 Rorug02G0044200 Rorug02G0227700 Rorug05G0109800 Rorug05G0109900 Rorug05G0110000 Rorug05G0110100 Rorug05G0110300 Rorug05G0110400 Rorug05G0110500 Rorug07G0083800 Rorug07G0083900.1 Rorug07G0103700
rosa_samantha Rh1BG069000 Rh1BG069100 Rh1BG069200 Rh1CG084000 Rh1DG090700 Rh1DG090800 Rh1DG090900 Rh2AG092500 Rh2DG091600 Rh2DG309400 Rh5AG202100 Rh5AG202200 Rh5AG202500 Rh5AG202800 Rh5AG202900 Rh5CG220600 Rh5CG220700 Rh5CG220800 Rh5CG220900 Rh5CG221600 Rh5CG221900 Rh5CG222000 Rh5CG222100 Rh5DG203300 Rh5DG203400 Rh5DG203500 Rh5DG204100 Rh5DG204300 Rh5DG204400 Rh5DG204600 Rh6BG517600 Rh6CG523400 Rh6DG509100 Rh7AG213600 Rh7BG211400 Rh7DG220800
rosa_wichuraiana Rw0G010630 Rw1G006750 Rw1G006770 Rw5G018300 Rw5G018310 Rw5G018330 Rw6G044090 Rw7G018510 Rw7G020290

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 67
AciI CCGC 2 cut(s) 140, 398
AcsI RAATTY 2 cut(s) 145, 289
AgsI TTSAA 3 cut(s) 349, 608, 680
AjnI CCWGG 1 cut(s) 736
AluBI AGCT 4 cut(s) 183, 496, 558, 654
AluI AGCT 4 cut(s) 183, 496, 558, 654
Alw21I GWGCWC 1 cut(s) 278
Alw26I GTCTC 1 cut(s) 162
AoxI GGCC 3 cut(s) 98, 307, 596
ApeKI GCWGC 1 cut(s) 127
ApoI RAATTY 2 cut(s) 145, 289
Asp700I GAANNNNTTC 1 cut(s) 675
AspLEI GCGC 2 cut(s) 68, 241
AspS9I GGNCC 2 cut(s) 106, 308
AsuHPI GGTGA 1 cut(s) 452
AvaII GGWCC 1 cut(s) 106
BauI CACGAG 2 cut(s) 243, 368
Bbv12I GWGCWC 1 cut(s) 278
BbvI GCAGC 1 cut(s) 139
BccI CCATC 1 cut(s) 735
BciT130I CCWGG 1 cut(s) 738
BcoDI GTCTC 1 cut(s) 162
BfaI CTAG 3 cut(s) 110, 401, 425
BfoI RGCGCY 1 cut(s) 242
BisI GCNGC 1 cut(s) 128
BlsI GCNGC 1 cut(s) 129
Bme1390I CCNGG 1 cut(s) 738
Bme18I GGWCC 1 cut(s) 106
BmgT120I GGNCC 2 cut(s) 106, 308
BmrFI CCNGG 1 cut(s) 738
BsaI GGTCTC 1 cut(s) 162
BsaJI CCNNGG 1 cut(s) 317
BsaXI ACNNNNNCTCC 2 cut(s) 234, 264
Bse3DI GCAATG 1 cut(s) 210
BseBI CCWGG 1 cut(s) 738
BseDI CCNNGG 1 cut(s) 317
BseGI GGATG 1 cut(s) 746
BseMI GCAATG 1 cut(s) 210
BseMII CTCAG 2 cut(s) 113, 164
BseXI GCAGC 1 cut(s) 139
BseYI CCCAGC 1 cut(s) 475
BshFI GGCC 3 cut(s) 100, 309, 598
BsiHKAI GWGCWC 1 cut(s) 278
BsmAI GTCTC 1 cut(s) 162
BsmI GAATGC 1 cut(s) 479
BsnI GGCC 3 cut(s) 100, 309, 598
Bso31I GGTCTC 1 cut(s) 162
Bsp1286I GDGCHC 1 cut(s) 278
BspACI CCGC 2 cut(s) 140, 398
BspANI GGCC 3 cut(s) 100, 309, 598
BspCNI CTCAG 2 cut(s) 114, 165
BspTNI GGTCTC 1 cut(s) 162
BsrDI GCAATG 1 cut(s) 210
BssECI CCNNGG 1 cut(s) 317
BssSI CACGAG 2 cut(s) 243, 368
BssT1I CCWWGG 1 cut(s) 317
Bst2BI CACGAG 2 cut(s) 243, 368
Bst2UI CCWGG 1 cut(s) 738
Bst4CI ACNGT 2 cut(s) 513, 575
BstC8I GCNNGC 2 cut(s) 64, 387
BstDEI CTNAG 3 cut(s) 35, 122, 173
BstF5I GGATG 1 cut(s) 746
BstH2I RGCGCY 1 cut(s) 242
BstHHI GCGC 2 cut(s) 68, 241
BstMAI GTCTC 1 cut(s) 162
BstNI CCWGG 1 cut(s) 738
BstNSI RCATGY 1 cut(s) 66
BstSCI CCNGG 1 cut(s) 736
BstV1I GCAGC 1 cut(s) 139
BsuRI GGCC 3 cut(s) 100, 309, 598
BtsCI GGATG 1 cut(s) 746
Cac8I GCNNGC 2 cut(s) 64, 387
CfoI GCGC 2 cut(s) 68, 241
Cfr13I GGNCC 2 cut(s) 106, 308
CviAII CATG 4 cut(s) 63, 69, 217, 579
DdeI CTNAG 3 cut(s) 35, 122, 173
Eco130I CCWWGG 1 cut(s) 317
Eco31I GGTCTC 1 cut(s) 162
Eco47I GGWCC 1 cut(s) 106
EcoO109I RGGNCCY 1 cut(s) 106
EcoRI GAATTC 1 cut(s) 289
EcoRII CCWGG 1 cut(s) 736
EcoT14I CCWWGG 1 cut(s) 317
ErhI CCWWGG 1 cut(s) 317
FaeI CATG 4 cut(s) 66, 72, 220, 582
FatI CATG 4 cut(s) 62, 68, 216, 578
FauI CCCGC 1 cut(s) 133
Fnu4HI GCNGC 1 cut(s) 128
Fsp4HI GCNGC 1 cut(s) 128
FspAI RTGCGCAY 1 cut(s) 67
FspBI CTAG 3 cut(s) 110, 401, 425
FspI TGCGCA 1 cut(s) 67
GlaI GCGC 2 cut(s) 67, 240
GluI GCNGC 1 cut(s) 128
GsaI CCCAGC 1 cut(s) 479
HaeII RGCGCY 1 cut(s) 242
HaeIII GGCC 3 cut(s) 100, 309, 598
HhaI GCGC 2 cut(s) 68, 241
Hin1II CATG 4 cut(s) 66, 72, 220, 582
Hin6I GCGC 2 cut(s) 66, 239
HinP1I GCGC 2 cut(s) 66, 239
HincII GTYRAC 1 cut(s) 472
HindII GTYRAC 1 cut(s) 472
HinfI GANTC 1 cut(s) 246
HpaI GTTAAC 1 cut(s) 472
HphI GGTGA 1 cut(s) 452
Hpy166II GTNNAC 3 cut(s) 262, 472, 730
Hpy188I TCNGA 2 cut(s) 123, 490
Hpy188III TCNNGA 4 cut(s) 165, 338, 633, 685
Hpy8I GTNNAC 3 cut(s) 262, 472, 730
HpyAV CCTTC 3 cut(s) 431, 656, 660
HpyCH4III ACNGT 2 cut(s) 513, 575
HpyCH4V TGCA 2 cut(s) 62, 694
HpyF3I CTNAG 3 cut(s) 35, 122, 173
Hsp92II CATG 4 cut(s) 66, 72, 220, 582
HspAI GCGC 2 cut(s) 66, 239
KspAI GTTAAC 1 cut(s) 472
LmnI GCTCC 1 cut(s) 188
Lsp1109I GCAGC 1 cut(s) 139
MaeI CTAG 3 cut(s) 110, 401, 425
MaeIII GTNAC 2 cut(s) 507, 613
MboII GAAGA 3 cut(s) 353, 474, 596
MhlI GDGCHC 1 cut(s) 278
MluCI AATT 5 cut(s) 82, 145, 289, 465, 627
MlyI GAGTC 1 cut(s) 255
MnlI CCTC 8 cut(s) 66, 90, 117, 233, 260, 364, 538, 738
MroXI GAANNNNTTC 1 cut(s) 675
MseI TTAA 2 cut(s) 324, 471
MslI CAYNNNNRTG 1 cut(s) 67
MspR9I CCNGG 1 cut(s) 738
Mva1269I GAATGC 1 cut(s) 479
MvaI CCWGG 1 cut(s) 738
NlaIII CATG 4 cut(s) 66, 72, 220, 582
NmuCI GTSAC 1 cut(s) 613
NsbI TGCGCA 1 cut(s) 67
NspI RCATGY 1 cut(s) 66
PaeI GCATGC 1 cut(s) 66
PctI GAATGC 1 cut(s) 479
PdmI GAANNNNTTC 1 cut(s) 675
PfoI TCCNGGA 1 cut(s) 736
PkrI GCNGC 1 cut(s) 129
PleI GAGTC 1 cut(s) 254
PpsI GAGTC 1 cut(s) 254
PpuMI RGGWCCY 1 cut(s) 106
Psp5II RGGWCCY 1 cut(s) 106
Psp6I CCWGG 1 cut(s) 736
PspFI CCCAGC 1 cut(s) 475
PspGI CCWGG 1 cut(s) 736
PspPI GGNCC 2 cut(s) 106, 308
PspPPI RGGWCCY 1 cut(s) 106
RseI CAYNNNNRTG 1 cut(s) 67
SaqAI TTAA 2 cut(s) 324, 471
SatI GCNGC 1 cut(s) 128
Sau96I GGNCC 2 cut(s) 106, 308
SchI GAGTC 1 cut(s) 255
ScrFI CCNGG 1 cut(s) 738
SduI GDGCHC 1 cut(s) 278
SinI GGWCC 1 cut(s) 106
SmiMI CAYNNNNRTG 1 cut(s) 67
SphI GCATGC 1 cut(s) 66
Sse9I AATT 5 cut(s) 82, 145, 289, 465, 627
SsiI CCGC 2 cut(s) 140, 398
SspI AATATT 1 cut(s) 675
SspMI CTAG 3 cut(s) 110, 401, 425
StyD4I CCNGG 1 cut(s) 736
StyI CCWWGG 1 cut(s) 317
TaaI ACNGT 2 cut(s) 513, 575
TasI AATT 5 cut(s) 82, 145, 289, 465, 627
Tru1I TTAA 2 cut(s) 324, 471
Tru9I TTAA 2 cut(s) 324, 471
TseFI GTSAC 1 cut(s) 613
TseI GCWGC 1 cut(s) 127
Tsp45I GTSAC 1 cut(s) 613
TspDTI ATGAA 4 cut(s) 138, 233, 450, 567
VpaK11BI GGWCC 1 cut(s) 106
XapI RAATTY 2 cut(s) 145, 289
XceI RCATGY 1 cut(s) 66
XmnI GAANNNNTTC 1 cut(s) 675
XspI CTAG 3 cut(s) 110, 401, 425
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.