Rh7AG213600

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
Physical Location & Seq
Forward (+)
19691708 .. 19698319
6612 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG213600.1

Sequence Viewer

Length: 756 bp
ATGGAAGTTTCAGTGGCTGGTTTTGCACTGAGCGTTGTCCTTGTTGGCCTACTGAGTTGTTCATGGAGTGTACTCAACTGGGTGTGGCTGAGGCCAAAGAGACTTGAAAGATTGTTGAGACAACAAGGCTTTCAGGGAAATTCCTACAAGCTTTTCTATGGAGACGTGAAGGAGAGTTCTGCAATGTTGAGAGAAGCAAAATCTAAGCCAATGAAACTCTCGACCTGTCATGATATAGCCCCAAGAGTCATCCCGTTTGTGCATCGAACTGTCAACATCCATGCGTTTCACCAAAGTTGTAATGGGATGATTAAAGAATGGGAAAGCTTGGTTTCCAAAGAGGGTTCATGTGAGTTGGATGTTTGGCCTAGTCTCCAAAGTTTATCAGATGATGTGCTTTGTCGAACATCATTTGGAAGTAGCTATGAAGAAGGAAAGCATATATTTGAACTCTTGAAAGAGCAGGCAGTACTTTCAATAAAAGCTTTACAAAGTGTTAACATTCCAGGATGGAGGTTTGTACCAACTAAGATGAACAAGAAGATGATGTTGATTGATAAAGAAATTAAATGTTTACTCAAGGGAATTATAAATAAAAGAGAAGAGGCCATTAAGGCTGGTGAACCCTCTAAAGACGACCTACTAAGTCTACTTCTGGAATCCAATCTCAAGGAAATTCATGAACATAGGAACAACAAAAACTTTGGGATGAGTATTGAAGAAGTTATCGAGGACTGTGACCATGATTTTACGTGA

Protein Analysis

251

Amino Acids

28.64

Weight (kDa)

7.08

Isoelectric Point (pI)

56.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 95 - 243 5.1e-09 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000133)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G14610 AT3G14620 AT3G14630 AT3G14630 AT3G14640 AT3G14640 AT3G14650 AT3G14660 AT3G14660 AT3G14660 AT3G14680 AT3G14690 AT3G14690
fragaria_vesca FvH4_1g08410 FvH4_2g31040 FvH4_3g17200 FvH4_3g17200 FvH4_3g17220 FvH4_3g17220 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17260 FvH4_3g17260 FvH4_3g17263 FvH4_3g17264 FvH4_3g17265 FvH4_3g17266 FvH4_5g18530 FvH4_5g19690 FvH4_7g03990 FvH4_7g03990 FvH4_7g03990 FvH4_7g03990 FvH4_7g03990 FvH4_7g17900 FvH4_7g17900
malus_domestica MD02G1088200.v1.1 MD03G1224800.v1.1 MD03G1224900.v1.1 MD03G1225000.v1.1 MD11G1274100.v1.1 MD11G1274200.v1.1 MD11G1274300.v1.1 MD11G1274500.v1.1 MD11G1274600.v1.1 MD15G1050400.v1.1 MD15G1050500.v1.1 MD15G1050600.v1.1 MD15G1050700.v1.1
prunus_persica Prupe.1G404900_v2.0.a1 Prupe.1G404900_v2.0.a1 Prupe.4G152600_v2.0.a1 Prupe.4G152700_v2.0.a1 Prupe.4G152800_v2.0.a1 Prupe.4G152900_v2.0.a1 Prupe.4G153000_v2.0.a1 Prupe.7G201400_v2.0.a1 Prupe.7G201400_v2.0.a1
pyrus_communis pycom03g17310 pycom03g17330 pycom11g21520 pycom11g21600 pycom11g24180 pycom11g24190 pycom11g24200 pycom11g24210 pycom15g04890
rosa_chinensis RchiOBHm_Chr1g0327671 RchiOBHm_Chr1g0327711 RchiOBHm_Chr1g0327721 RchiOBHm_Chr2g0094501 RchiOBHm_Chr5g0028601 RchiOBHm_Chr5g0028611 RchiOBHm_Chr5g0028621 RchiOBHm_Chr5g0028661 RchiOBHm_Chr5g0028671 RchiOBHm_Chr5g0028701 RchiOBHm_Chr5g0028721 RchiOBHm_Chr5g0028741 RchiOBHm_Chr5g0028751 RchiOBHm_Chr5g0028771 RchiOBHm_Chr5g0028821 RchiOBHm_Chr6g0311761 RchiOBHm_Chr7g0204421
rosa_laevigata RLG00000003223 RLG00000003462 RLG00000010376 RLG00000012452 RLG00000016496 RLG00000018531 RLG00000018532 RLG00000018536 RLG00000029973 RLG00000029976 RLG00000033105 RLG00000033106 RLG00000033107 RLG00000033109 RLG00000033110 RLG00000033111 RLG00000033112 RLG00000033113 RLG00000033114 RLG00000033116 RLG00000033124
rosa_multiflora Rmu_co8029584.1_g000001 Rmu_co8159878.1_g000001 Rmu_co8310611.1_g000001 Rmu_sc0001000.1_g000004 Rmu_sc0001000.1_g000016 Rmu_sc0001575.1_g000020 Rmu_sc0001575.1_g000021 Rmu_sc0001575.1_g000022 Rmu_sc0001575.1_g000027 Rmu_sc0001575.1_g000035 Rmu_sc0001575.1_g000040 Rmu_sc0002888.1_g000039 Rmu_sc0003951.1_g000001 Rmu_sc0004359.1_g000045 Rmu_sc0005178.1_g000001 Rmu_sc0005178.1_g000002 Rmu_sc0005178.1_g000004 Rmu_sc0023855.1_g000001 Rmu_sc0024393.1_g000001 Rmu_sc0035326.1_g000001
rosa_roxburghii Rroxscaffold_1G00051080 Rroxscaffold_1G00051100 Rroxscaffold_1G00051110 Rroxscaffold_1G00051120 Rroxscaffold_1G00051150 Rroxscaffold_1G00051160 Rroxscaffold_1G00051170 Rroxscaffold_1G00051180 Rroxscaffold_2G00123610 Rroxscaffold_2G00147120 Rroxscaffold_3G00250540 Rroxscaffold_3G00253110 Rroxscaffold_3G00253120 Rroxscaffold_4G00322410 Rroxscaffold_4G00322440 Rroxscaffold_4G00322470 Rroxscaffold_7G00157330
rosa_rugosa Rorug01G0069500 Rorug01G0069600 Rorug01G0069700 Rorug02G0044200 Rorug02G0227700 Rorug05G0109800 Rorug05G0109900 Rorug05G0110000 Rorug05G0110100 Rorug05G0110300 Rorug05G0110400 Rorug05G0110500 Rorug07G0083800 Rorug07G0083900.1 Rorug07G0103700
rosa_samantha Rh1BG069000 Rh1BG069100 Rh1BG069200 Rh1CG084000 Rh1DG090700 Rh1DG090800 Rh1DG090900 Rh2AG092500 Rh2DG091600 Rh2DG309400 Rh5AG202100 Rh5AG202200 Rh5AG202500 Rh5AG202800 Rh5AG202900 Rh5CG220600 Rh5CG220700 Rh5CG220800 Rh5CG220900 Rh5CG221600 Rh5CG221900 Rh5CG222000 Rh5CG222100 Rh5DG203300 Rh5DG203400 Rh5DG203500 Rh5DG204100 Rh5DG204300 Rh5DG204400 Rh5DG204600 Rh6BG517600 Rh6CG523400 Rh6DG509100 Rh7AG213600 Rh7BG211400 Rh7DG220800
rosa_wichuraiana Rw0G010630 Rw1G006750 Rw1G006770 Rw5G018300 Rw5G018310 Rw5G018330 Rw6G044090 Rw7G018510 Rw7G020290

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 590
AccI GTMKAC 1 cut(s) 649
AcsI RAATTY 2 cut(s) 139, 675
AfaI GTAC 3 cut(s) 72, 471, 522
AgsI TTSAA 5 cut(s) 107, 449, 457, 477, 719
AjiI CACGTC 1 cut(s) 166
AjnI CCWGG 1 cut(s) 505
AluBI AGCT 4 cut(s) 151, 327, 423, 485
AluI AGCT 4 cut(s) 151, 327, 423, 485
Alw26I GTCTC 4 cut(s) 94, 112, 156, 377
AlwNI CAGNNNCTG 1 cut(s) 17
AoxI GGCC 4 cut(s) 46, 92, 365, 606
ApoI RAATTY 2 cut(s) 139, 675
AsuHPI GGTGA 2 cut(s) 281, 632
BbvCI CCTCAGC 1 cut(s) 89
BccI CCATC 1 cut(s) 504
BciT130I CCWGG 1 cut(s) 507
BcoDI GTCTC 4 cut(s) 94, 112, 156, 377
BfaI CTAG 1 cut(s) 369
BglI GCCNNNNNGGC 1 cut(s) 614
BmcAI AGTACT 1 cut(s) 471
Bme1390I CCNGG 1 cut(s) 507
BmgBI CACGTC 1 cut(s) 166
BmrFI CCNGG 1 cut(s) 507
BmrI ACTGGG 1 cut(s) 88
BmsI GCATC 1 cut(s) 271
BmuI ACTGGG 1 cut(s) 88
Bpu10I CCTNAGC 1 cut(s) 89
BpuEI CTTGAG 2 cut(s) 563, 653
BsaAI YACGTR 1 cut(s) 753
Bse1I ACTGG 1 cut(s) 83
Bse3DI GCAATG 1 cut(s) 189
BseBI CCWGG 1 cut(s) 507
BseGI GGATG 6 cut(s) 249, 276, 312, 364, 515, 714
BseMI GCAATG 1 cut(s) 189
BseMII CTCAG 3 cut(s) 20, 44, 80
BseNI ACTGG 1 cut(s) 83
BshFI GGCC 4 cut(s) 48, 94, 367, 608
BsmAI GTCTC 4 cut(s) 94, 112, 156, 377
BsmBI CGTCTC 1 cut(s) 156
BsnI GGCC 4 cut(s) 48, 94, 367, 608
BspANI GGCC 4 cut(s) 48, 94, 367, 608
BspCNI CTCAG 3 cut(s) 21, 45, 81
BspHI TCATGA 2 cut(s) 229, 679
BsrDI GCAATG 1 cut(s) 189
BsrI ACTGG 1 cut(s) 83
Bst2UI CCWGG 1 cut(s) 507
Bst4CI ACNGT 2 cut(s) 271, 737
Bst6I CTCTTC 1 cut(s) 597
BstBAI YACGTR 1 cut(s) 753
BstC8I GCNNGC 1 cut(s) 465
BstDEI CTNAG 6 cut(s) 29, 53, 89, 204, 528, 644
BstF5I GGATG 6 cut(s) 249, 276, 312, 364, 515, 714
BstMAI GTCTC 4 cut(s) 94, 112, 156, 377
BstMWI GCNNNNNNNGC 2 cut(s) 23, 614
BstNI CCWGG 1 cut(s) 507
BstSCI CCNGG 1 cut(s) 505
BsuRI GGCC 4 cut(s) 48, 94, 367, 608
BtrI CACGTC 1 cut(s) 166
BtsCI GGATG 6 cut(s) 249, 276, 312, 364, 515, 714
BtsIMutI CAGTG 2 cut(s) 18, 26
Cac8I GCNNGC 1 cut(s) 465
CaiI CAGNNNCTG 1 cut(s) 17
CciI TCATGA 2 cut(s) 229, 679
Csp6I GTAC 3 cut(s) 71, 470, 521
CviAII CATG 6 cut(s) 63, 230, 281, 348, 680, 743
CviQI GTAC 3 cut(s) 71, 470, 521
DdeI CTNAG 6 cut(s) 29, 53, 89, 204, 528, 644
Eam1104I CTCTTC 1 cut(s) 597
EarI CTCTTC 1 cut(s) 597
EcoRII CCWGG 1 cut(s) 505
Esp3I CGTCTC 1 cut(s) 156
FaeI CATG 6 cut(s) 66, 233, 284, 351, 683, 746
FatI CATG 6 cut(s) 62, 229, 280, 347, 679, 742
FblI GTMKAC 1 cut(s) 649
FokI GGATG 6 cut(s) 236, 263, 319, 371, 522, 721
FspBI CTAG 1 cut(s) 369
HaeIII GGCC 4 cut(s) 48, 94, 367, 608
Hin1II CATG 6 cut(s) 66, 233, 284, 351, 683, 746
HincII GTYRAC 2 cut(s) 274, 499
HindII GTYRAC 2 cut(s) 274, 499
HindIII AAGCTT 3 cut(s) 149, 325, 483
HinfI GANTC 2 cut(s) 246, 659
HpaI GTTAAC 1 cut(s) 499
HphI GGTGA 2 cut(s) 281, 632
Hpy166II GTNNAC 6 cut(s) 71, 274, 499, 575, 623, 650
Hpy188I TCNGA 1 cut(s) 388
Hpy188III TCNNGA 5 cut(s) 220, 230, 454, 656, 680
Hpy8I GTNNAC 6 cut(s) 71, 274, 499, 575, 623, 650
HpyAV CCTTC 2 cut(s) 163, 425
HpyCH4III ACNGT 2 cut(s) 271, 737
HpyCH4IV ACGT 2 cut(s) 165, 752
HpyCH4V TGCA 3 cut(s) 26, 182, 262
HpyF10VI GCNNNNNNNGC 2 cut(s) 23, 614
HpyF3I CTNAG 6 cut(s) 29, 53, 89, 204, 528, 644
HpySE526I ACGT 2 cut(s) 165, 752
Hsp92II CATG 6 cut(s) 66, 233, 284, 351, 683, 746
KspAI GTTAAC 1 cut(s) 499
LpnPI CCDG 9 cut(s) 3, 64, 119, 238, 449, 492, 519, 603, 641
LweI GCATC 1 cut(s) 271
MaeI CTAG 1 cut(s) 369
MaeII ACGT 2 cut(s) 165, 752
MaeIII GTNAC 1 cut(s) 737
MboII GAAGA 4 cut(s) 440, 553, 614, 731
MluCI AATT 4 cut(s) 139, 564, 585, 675
MlyI GAGTC 1 cut(s) 255
MmeI TCCRAC 1 cut(s) 336
MnlI CCTC 6 cut(s) 84, 334, 507, 598, 637, 724
MseI TTAA 4 cut(s) 312, 498, 567, 612
MspR9I CCNGG 1 cut(s) 507
MvaI CCWGG 1 cut(s) 507
MwoI GCNNNNNNNGC 2 cut(s) 23, 614
NlaIII CATG 6 cut(s) 66, 233, 284, 351, 683, 746
NmuCI GTSAC 1 cut(s) 737
PagI TCATGA 2 cut(s) 229, 679
PfeI GAWTC 1 cut(s) 659
PfoI TCCNGGA 1 cut(s) 505
PleI GAGTC 1 cut(s) 254
PpsI GAGTC 1 cut(s) 254
Ppu21I YACGTR 1 cut(s) 753
PsiI TTATAA 1 cut(s) 590
Psp6I CCWGG 1 cut(s) 505
PspGI CCWGG 1 cut(s) 505
PstNI CAGNNNCTG 1 cut(s) 17
RsaI GTAC 3 cut(s) 72, 471, 522
RsaNI GTAC 3 cut(s) 71, 470, 521
SaqAI TTAA 4 cut(s) 312, 498, 567, 612
ScaI AGTACT 1 cut(s) 471
SchI GAGTC 1 cut(s) 255
ScrFI CCNGG 1 cut(s) 507
SetI ASST 9 cut(s) 153, 168, 227, 329, 425, 487, 518, 642, 755
SfaNI GCATC 1 cut(s) 271
SmlI CTYRAG 2 cut(s) 578, 668
SmoI CTYRAG 2 cut(s) 578, 668
Sse9I AATT 4 cut(s) 139, 564, 585, 675
SspMI CTAG 1 cut(s) 369
StyD4I CCNGG 1 cut(s) 505
TaaI ACNGT 2 cut(s) 271, 737
TaiI ACGT 2 cut(s) 168, 755
TaqI TCGA 4 cut(s) 221, 265, 403, 729
TasI AATT 4 cut(s) 139, 564, 585, 675
TatI WGTACW 2 cut(s) 70, 469
TfiI GAWTC 1 cut(s) 659
Tru1I TTAA 4 cut(s) 312, 498, 567, 612
Tru9I TTAA 4 cut(s) 312, 498, 567, 612
TscAI CASTG 2 cut(s) 18, 33
TseFI GTSAC 1 cut(s) 737
Tsp45I GTSAC 1 cut(s) 737
TspDTI ATGAA 7 cut(s) 51, 227, 336, 441, 548, 668, 696
TspRI CASTG 2 cut(s) 18, 33
XapI RAATTY 2 cut(s) 139, 675
XcmI CCANNNNNNNNNTGG 1 cut(s) 299
XmiI GTMKAC 1 cut(s) 649
XspI CTAG 1 cut(s) 369
ZrmI AGTACT 1 cut(s) 471
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.