Rw7G020290

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
Physical Location & Seq
Reverse (-)
22877455 .. 22887080
9626 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G020290.1

Sequence Viewer

Length: 1308 bp
ATGACTTGTTTTGCACTAAGCATTGTTATTTTCAACATATTAACTTGTGCATGGAGAGTGCTAAACTATGTGTGGAAGCAAGGACTCAAAGGCAACTCCTACATGCTTTTCATCGGAGACATGAAAGAGAGCTTTATGATGCGGAAACAAGCACAATCTAAACCAATCAACCTCTCATCCTGTAGGGATTCTTTTACTTGGAATGGCACCATTCCAAAGGTGAATATCACCAAGCCAGAAGATTTAAAAGAAATCTTCGAAAAACATGATGATTTTCATAAGGTTGTAAGCCCAATTACAACTTTACTAATATTAAGTTTTGCAATCTATGAGGGTGAGAAATGGGCTAGACACCAAACTATTATCAACCCAGCATTTCATTTAGAGAAGCTAAAGTGTATGTTACCGGCCGTTTCTCAAAGTTGTGGTGAGATGATTAATGAATTGGAGACATTGCTTACCGAAAATGATTCATTTGAGTTGGACGTGTGGCCTTATCTCCAAAATTTGACGGGTGATGTGATATCTCGAACAACATTTGGAAGTAGTTACAAAGAAGGACTAAAAATATTTGAACTCTTGAGGGAACAAGCAGTACTTATGAACAAGAGGATGAAGCAAAATGCCAAAGAAGTACAAGGTTTACTGGAGGGAATTATAAATAAAAGAAAAGAGGCAATTAAGGGTGGTGAAGCAACTAAAGATGACTTATTAGGAATACATTTGGAATCCAATTTTAAGAAAATTCAAGAACATGGGAACCGAAAAAATATTGGACTGTGTCTTCAAGACATCATTGATGAGTGTAAACTGTTTTACTTTGGAGGGCAAGAAACCACTTCAGTATTAGTTGTTTCGACAATAGTTTTGCTCTCTCAAAATCCGAATTGGCAAACTCGTGCAAGAGAAGAGGTTTTGCAAGTATTTGGAAACAAAAGACCAGACTTTCAGGGGATGACACAACTAAAAGTTATGACCATGGTTTTACGTGAAAAAACACAACTTGGAACGTTATCATTACCAGTTGGAGTTGAAATGTCCATACCCATATTGCTTATTCATCACAATAAGAAACTGTGGGGTGATGATGCGGAAGAGTCTAATCCAGAAAGATTTTCAGAGGGAGCAACTAAGGGACAAATTTTGTTCTTCCCTTTCAAGGGAGGTCCACGCATTTGCATTGTTGTGCTATCATTGATTTTGCAACACTTCACCTTTGAGCTTTCTCCATCATATGCTCATGCTCCTTCCTCATTTATAACTCTCCAGCCACAATACGACGTTCATATCGTCTTAAACAAACATTAA

Protein Analysis

435

Amino Acids

49.62

Weight (kDa)

7.62

Isoelectric Point (pI)

47.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 67 - 185 2.7e-09 Cytochrome P450
p450 PF00067 192 - 331 3.2e-16 Cytochrome P450
p450 PF00067 335 - 410 6.8e-09 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000133)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G14610 AT3G14620 AT3G14630 AT3G14630 AT3G14640 AT3G14640 AT3G14650 AT3G14660 AT3G14660 AT3G14660 AT3G14680 AT3G14690 AT3G14690
fragaria_vesca FvH4_1g08410 FvH4_2g31040 FvH4_3g17200 FvH4_3g17200 FvH4_3g17220 FvH4_3g17220 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17240 FvH4_3g17260 FvH4_3g17260 FvH4_3g17263 FvH4_3g17264 FvH4_3g17265 FvH4_3g17266 FvH4_5g18530 FvH4_5g19690 FvH4_7g03990 FvH4_7g03990 FvH4_7g03990 FvH4_7g03990 FvH4_7g03990 FvH4_7g17900 FvH4_7g17900
malus_domestica MD02G1088200.v1.1 MD03G1224800.v1.1 MD03G1224900.v1.1 MD03G1225000.v1.1 MD11G1274100.v1.1 MD11G1274200.v1.1 MD11G1274300.v1.1 MD11G1274500.v1.1 MD11G1274600.v1.1 MD15G1050400.v1.1 MD15G1050500.v1.1 MD15G1050600.v1.1 MD15G1050700.v1.1
prunus_persica Prupe.1G404900_v2.0.a1 Prupe.1G404900_v2.0.a1 Prupe.4G152600_v2.0.a1 Prupe.4G152700_v2.0.a1 Prupe.4G152800_v2.0.a1 Prupe.4G152900_v2.0.a1 Prupe.4G153000_v2.0.a1 Prupe.7G201400_v2.0.a1 Prupe.7G201400_v2.0.a1
pyrus_communis pycom03g17310 pycom03g17330 pycom11g21520 pycom11g21600 pycom11g24180 pycom11g24190 pycom11g24200 pycom11g24210 pycom15g04890
rosa_chinensis RchiOBHm_Chr1g0327671 RchiOBHm_Chr1g0327711 RchiOBHm_Chr1g0327721 RchiOBHm_Chr2g0094501 RchiOBHm_Chr5g0028601 RchiOBHm_Chr5g0028611 RchiOBHm_Chr5g0028621 RchiOBHm_Chr5g0028661 RchiOBHm_Chr5g0028671 RchiOBHm_Chr5g0028701 RchiOBHm_Chr5g0028721 RchiOBHm_Chr5g0028741 RchiOBHm_Chr5g0028751 RchiOBHm_Chr5g0028771 RchiOBHm_Chr5g0028821 RchiOBHm_Chr6g0311761 RchiOBHm_Chr7g0204421
rosa_laevigata RLG00000003223 RLG00000003462 RLG00000010376 RLG00000012452 RLG00000016496 RLG00000018531 RLG00000018532 RLG00000018536 RLG00000029973 RLG00000029976 RLG00000033105 RLG00000033106 RLG00000033107 RLG00000033109 RLG00000033110 RLG00000033111 RLG00000033112 RLG00000033113 RLG00000033114 RLG00000033116 RLG00000033124
rosa_multiflora Rmu_co8029584.1_g000001 Rmu_co8159878.1_g000001 Rmu_co8310611.1_g000001 Rmu_sc0001000.1_g000004 Rmu_sc0001000.1_g000016 Rmu_sc0001575.1_g000020 Rmu_sc0001575.1_g000021 Rmu_sc0001575.1_g000022 Rmu_sc0001575.1_g000027 Rmu_sc0001575.1_g000035 Rmu_sc0001575.1_g000040 Rmu_sc0002888.1_g000039 Rmu_sc0003951.1_g000001 Rmu_sc0004359.1_g000045 Rmu_sc0005178.1_g000001 Rmu_sc0005178.1_g000002 Rmu_sc0005178.1_g000004 Rmu_sc0023855.1_g000001 Rmu_sc0024393.1_g000001 Rmu_sc0035326.1_g000001
rosa_roxburghii Rroxscaffold_1G00051080 Rroxscaffold_1G00051100 Rroxscaffold_1G00051110 Rroxscaffold_1G00051120 Rroxscaffold_1G00051150 Rroxscaffold_1G00051160 Rroxscaffold_1G00051170 Rroxscaffold_1G00051180 Rroxscaffold_2G00123610 Rroxscaffold_2G00147120 Rroxscaffold_3G00250540 Rroxscaffold_3G00253110 Rroxscaffold_3G00253120 Rroxscaffold_4G00322410 Rroxscaffold_4G00322440 Rroxscaffold_4G00322470 Rroxscaffold_7G00157330
rosa_rugosa Rorug01G0069500 Rorug01G0069600 Rorug01G0069700 Rorug02G0044200 Rorug02G0227700 Rorug05G0109800 Rorug05G0109900 Rorug05G0110000 Rorug05G0110100 Rorug05G0110300 Rorug05G0110400 Rorug05G0110500 Rorug07G0083800 Rorug07G0083900.1 Rorug07G0103700
rosa_samantha Rh1BG069000 Rh1BG069100 Rh1BG069200 Rh1CG084000 Rh1DG090700 Rh1DG090800 Rh1DG090900 Rh2AG092500 Rh2DG091600 Rh2DG309400 Rh5AG202100 Rh5AG202200 Rh5AG202500 Rh5AG202800 Rh5AG202900 Rh5CG220600 Rh5CG220700 Rh5CG220800 Rh5CG220900 Rh5CG221600 Rh5CG221900 Rh5CG222000 Rh5CG222100 Rh5DG203300 Rh5DG203400 Rh5DG203500 Rh5DG204100 Rh5DG204300 Rh5DG204400 Rh5DG204600 Rh6BG517600 Rh6CG523400 Rh6DG509100 Rh7AG213600 Rh7BG211400 Rh7DG220800
rosa_wichuraiana Rw0G010630 Rw1G006750 Rw1G006770 Rw5G018300 Rw5G018310 Rw5G018330 Rw6G044090 Rw7G018510 Rw7G020290

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 659, 1259
AccB1I GGYRCC 1 cut(s) 206
AciI CCGC 2 cut(s) 142, 1091
AclI AACGTT 1 cut(s) 1010
AcoI YGGCCR 1 cut(s) 408
AcsI RAATTY 3 cut(s) 505, 744, 1140
AcuI CTGAAG 1 cut(s) 825
AfaI GTAC 2 cut(s) 597, 636
AfiI CCNNNNNNNGG 2 cut(s) 1159, 1160
AflIII ACRYGT 1 cut(s) 486
AgsI TTSAA 6 cut(s) 34, 575, 749, 788, 1034, 1159
AjiI CACGTC 1 cut(s) 487
AluBI AGCT 3 cut(s) 132, 391, 1222
AluI AGCT 3 cut(s) 132, 391, 1222
Alw26I GTCTC 2 cut(s) 111, 443
AoxI GGCC 2 cut(s) 408, 491
ApoI RAATTY 3 cut(s) 505, 744, 1140
ArsI GACNNNNNNTTYG 2 cut(s) 850, 882
AseI ATTAAT 1 cut(s) 438
AspS9I GGNCC 1 cut(s) 1166
AsuHPI GGTGA 8 cut(s) 220, 232, 347, 440, 527, 701, 1094, 1204
AsuII TTCGAA 1 cut(s) 258
AvaII GGWCC 1 cut(s) 1166
BanI GGYRCC 1 cut(s) 206
BauI CACGAG 1 cut(s) 897
BbsI GAAGAC 1 cut(s) 776
BccI CCATC 1 cut(s) 1237
BceAI ACGGC 1 cut(s) 395
BcoDI GTCTC 2 cut(s) 111, 443
BfaI CTAG 1 cut(s) 348
BfmI CTRYAG 1 cut(s) 181
BmcAI AGTACT 1 cut(s) 597
Bme18I GGWCC 1 cut(s) 1166
BmgBI CACGTC 1 cut(s) 487
BmgT120I GGNCC 1 cut(s) 1166
BmiI GGNNCC 2 cut(s) 208, 761
BmsI GCATC 2 cut(s) 129, 1078
BpiI GAAGAC 1 cut(s) 776
BpmI CTGGAG 2 cut(s) 668, 1250
Bpu14I TTCGAA 1 cut(s) 258
BpuEI CTTGAG 1 cut(s) 601
BsaAI YACGTR 1 cut(s) 989
BsaJI CCNNGG 1 cut(s) 978
Bsc4I CCNNNNNNNGG 2 cut(s) 1159, 1160
Bse118I RCCGGY 1 cut(s) 406
Bse1I ACTGG 2 cut(s) 651, 1022
Bse3DI GCAATG 1 cut(s) 452
BseDI CCNNGG 1 cut(s) 978
BseGI GGATG 3 cut(s) 176, 618, 960
BseLI CCNNNNNNNGG 2 cut(s) 1159, 1160
BseMI GCAATG 1 cut(s) 452
BseNI ACTGG 2 cut(s) 651, 1022
BseX3I CGGCCG 1 cut(s) 408
BseYI CCCAGC 1 cut(s) 370
Bsh1285I CGRYCG 1 cut(s) 411
BshFI GGCC 2 cut(s) 410, 493
BshNI GGYRCC 1 cut(s) 206
BsiEI CGRYCG 1 cut(s) 411
BsiSI CCGG 1 cut(s) 407
BslFI GGGAC 1 cut(s) 1149
BslI CCNNNNNNNGG 2 cut(s) 1159, 1160
BsmAI GTCTC 2 cut(s) 111, 443
BsmFI GGGAC 1 cut(s) 1149
BsnI GGCC 2 cut(s) 410, 493
Bsp119I TTCGAA 1 cut(s) 258
Bsp19I CCATGG 1 cut(s) 978
BspACI CCGC 2 cut(s) 142, 1091
BspANI GGCC 2 cut(s) 410, 493
BspLI GGNNCC 2 cut(s) 208, 761
BspT104I TTCGAA 1 cut(s) 258
BspT107I GGYRCC 1 cut(s) 206
BsrDI GCAATG 1 cut(s) 452
BsrFI RCCGGY 1 cut(s) 406
BsrI ACTGG 2 cut(s) 651, 1022
BssAI RCCGGY 1 cut(s) 406
BssECI CCNNGG 1 cut(s) 978
BssSI CACGAG 1 cut(s) 897
BssT1I CCWWGG 1 cut(s) 978
Bst2BI CACGAG 1 cut(s) 897
Bst4CI ACNGT 3 cut(s) 780, 813, 1077
Bst6I CTCTTC 2 cut(s) 903, 1089
BstBAI YACGTR 1 cut(s) 989
BstBI TTCGAA 1 cut(s) 258
BstDEI CTNAG 2 cut(s) 17, 1131
BstDSI CCRYGG 1 cut(s) 978
BstF5I GGATG 3 cut(s) 176, 618, 960
BstMAI GTCTC 2 cut(s) 111, 443
BstMCI CGRYCG 1 cut(s) 411
BstNSI RCATGY 1 cut(s) 106
BstSFI CTRYAG 1 cut(s) 181
BstV2I GAAGAC 1 cut(s) 776
BstZI CGGCCG 1 cut(s) 408
BsuRI GGCC 2 cut(s) 410, 493
BtgI CCRYGG 1 cut(s) 978
BtrI CACGTC 1 cut(s) 487
BtsCI GGATG 3 cut(s) 176, 618, 960
Cfr10I RCCGGY 1 cut(s) 406
Cfr13I GGNCC 1 cut(s) 1166
Csp6I GTAC 2 cut(s) 596, 635
CviAII CATG 7 cut(s) 51, 103, 121, 266, 755, 979, 1241
CviJI RGCY 9 cut(s) 132, 235, 291, 347, 391, 410, 493, 1222, 1270
CviKI_1 RGCY 9 cut(s) 132, 235, 291, 347, 391, 410, 493, 1222, 1270
CviQI GTAC 2 cut(s) 596, 635
DdeI CTNAG 2 cut(s) 17, 1131
DraI TTTAAA 1 cut(s) 246
EaeI YGGCCR 1 cut(s) 408
EagI CGGCCG 1 cut(s) 408
Eam1104I CTCTTC 2 cut(s) 903, 1089
EarI CTCTTC 2 cut(s) 903, 1089
EclXI CGGCCG 1 cut(s) 408
Eco130I CCWWGG 1 cut(s) 978
Eco32I GATATC 1 cut(s) 525
Eco47I GGWCC 1 cut(s) 1166
Eco52I CGGCCG 1 cut(s) 408
Eco57I CTGAAG 1 cut(s) 825
EcoRV GATATC 1 cut(s) 525
EcoT14I CCWWGG 1 cut(s) 978
ErhI CCWWGG 1 cut(s) 978
FaeI CATG 7 cut(s) 54, 106, 124, 269, 758, 982, 1244
FalI AAGNNNNNCTT 2 cut(s) 582, 614
FaqI GGGAC 1 cut(s) 1149
FatI CATG 7 cut(s) 50, 102, 120, 265, 754, 978, 1240
FauNDI CATATG 1 cut(s) 1234
FokI GGATG 3 cut(s) 163, 625, 967
FspBI CTAG 1 cut(s) 348
GsaI CCCAGC 1 cut(s) 374
GsuI CTGGAG 2 cut(s) 668, 1250
HaeIII GGCC 2 cut(s) 410, 493
HapII CCGG 1 cut(s) 407
Hin1II CATG 7 cut(s) 54, 106, 124, 269, 758, 982, 1244
HinfI GANTC 5 cut(s) 84, 188, 470, 728, 1097
HpaII CCGG 1 cut(s) 407
HphI GGTGA 8 cut(s) 220, 232, 347, 440, 527, 701, 1094, 1204
Hpy166II GTNNAC 3 cut(s) 644, 809, 1169
Hpy188I TCNGA 3 cut(s) 116, 885, 1120
Hpy188III TCNNGA 5 cut(s) 528, 580, 749, 788, 1106
Hpy8I GTNNAC 3 cut(s) 644, 809, 1169
Hpy99I CGWCG 1 cut(s) 1283
HpyAV CCTTC 2 cut(s) 551, 1257
HpyCH4III ACNGT 3 cut(s) 780, 813, 1077
HpyCH4IV ACGT 4 cut(s) 486, 988, 1010, 1281
HpyCH4V TGCA 7 cut(s) 14, 50, 323, 902, 919, 1179, 1204
HpyF3I CTNAG 2 cut(s) 17, 1131
HpySE526I ACGT 4 cut(s) 486, 988, 1010, 1281
Hsp92II CATG 7 cut(s) 54, 106, 124, 269, 758, 982, 1244
LmnI GCTCC 2 cut(s) 1124, 1249
LweI GCATC 2 cut(s) 129, 1078
MaeI CTAG 1 cut(s) 348
MaeII ACGT 4 cut(s) 486, 988, 1010, 1281
MaeIII GTNAC 2 cut(s) 402, 548
MboII GAAGA 6 cut(s) 247, 251, 776, 920, 1106, 1141
MluCI AATT 9 cut(s) 294, 443, 505, 654, 678, 733, 744, 886, 1140
MlyI GAGTC 2 cut(s) 78, 1106
MmeI TCCRAC 2 cut(s) 462, 1006
MseI TTAA 8 cut(s) 41, 245, 314, 438, 681, 738, 1295, 1306
MslI CAYNNNNRTG 1 cut(s) 1184
MspI CCGG 1 cut(s) 407
NcoI CCATGG 1 cut(s) 978
NdeI CATATG 1 cut(s) 1234
NlaIII CATG 7 cut(s) 54, 106, 124, 269, 758, 982, 1244
NlaIV GGNNCC 2 cut(s) 208, 761
NspI RCATGY 1 cut(s) 106
NspV TTCGAA 1 cut(s) 258
PcsI WCGNNNNNNNCGW 1 cut(s) 1287
PfeI GAWTC 3 cut(s) 188, 470, 728
PflFI GACNNNGTC 1 cut(s) 780
PleI GAGTC 2 cut(s) 78, 1105
PpsI GAGTC 2 cut(s) 78, 1105
Ppu21I YACGTR 1 cut(s) 989
PshBI ATTAAT 1 cut(s) 438
PsiI TTATAA 2 cut(s) 659, 1259
Psp1406I AACGTT 1 cut(s) 1010
PspFI CCCAGC 1 cut(s) 370
PspN4I GGNNCC 2 cut(s) 208, 761
PspPI GGNCC 1 cut(s) 1166
PsrI GAACNNNNNNTAC 2 cut(s) 579, 611
PsyI GACNNNGTC 1 cut(s) 780
RsaI GTAC 2 cut(s) 597, 636
RsaNI GTAC 2 cut(s) 596, 635
RseI CAYNNNNRTG 1 cut(s) 1184
SaqAI TTAA 8 cut(s) 41, 245, 314, 438, 681, 738, 1295, 1306
Sau96I GGNCC 1 cut(s) 1166
ScaI AGTACT 1 cut(s) 597
SchI GAGTC 2 cut(s) 78, 1106
SfaNI GCATC 2 cut(s) 129, 1078
SfcI CTRYAG 1 cut(s) 181
SfuI TTCGAA 1 cut(s) 258
SinI GGWCC 1 cut(s) 1166
SmiMI CAYNNNNRTG 1 cut(s) 1184
SmlI CTYRAG 1 cut(s) 580
SmoI CTYRAG 1 cut(s) 580
Sse9I AATT 9 cut(s) 294, 443, 505, 654, 678, 733, 744, 886, 1140
SsiI CCGC 2 cut(s) 142, 1091
SspI AATATT 3 cut(s) 312, 570, 772
SspMI CTAG 1 cut(s) 348
StyI CCWWGG 1 cut(s) 978
TaaI ACNGT 3 cut(s) 780, 813, 1077
TaiI ACGT 4 cut(s) 489, 991, 1013, 1284
TaqI TCGA 3 cut(s) 258, 529, 857
TasI AATT 9 cut(s) 294, 443, 505, 654, 678, 733, 744, 886, 1140
TatI WGTACW 2 cut(s) 595, 634
TfiI GAWTC 3 cut(s) 188, 470, 728
Tru1I TTAA 8 cut(s) 41, 245, 314, 438, 681, 738, 1295, 1306
Tru9I TTAA 8 cut(s) 41, 245, 314, 438, 681, 738, 1295, 1306
Tth111I GACNNNGTC 1 cut(s) 780
VpaK11BI GGWCC 1 cut(s) 1166
VspI ATTAAT 1 cut(s) 438
XapI RAATTY 3 cut(s) 505, 744, 1140
XceI RCATGY 1 cut(s) 106
XspI CTAG 1 cut(s) 348
ZrmI AGTACT 1 cut(s) 597
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.