Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0000739

Physical Location & Seq

Genomic Coordinates Forward (+)

33276739 .. 33278458

Gene Structure 1720 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G361100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 582 bp

ATGATCCCTACAACCACAACATCCCCAAGAAGCATAAAGTCCATGGAAGATGTGTGGAAAGAAATAAGCCTTGCTTCTCTTTCTCATGCTAATGACCACCACGGTCACTGCCCTCCGGCTGCTGCTGCTGCTTTTCGTGGCATGATTTTTCAAGATTTCTTCGCTACTTGTGCTTCTTCCAACAAAGACAAGGGCCGACCACCACCTCAACCAACAATTGCAGCACCAGCCACTGTTCTTAGCTTGAATTCCGATATTCAACTCCTTCCTGAAAGTGAAAGCACTACTAGTACCGCTCCTGCTCCTCTATTGAAGCACCCACTTAACCCACAACTTTTGCAAACTAGTCATGCCGCTACGCCTTCCTTTCATTTTCTCAACTCTTCCAGCTGCTCCGATGCTTTGGATTCCTCTTCACTCTTTCATGTGCCTTCTTACTACAACAAAAGGAAAAGGCCCATAGATCATCATCATCATCATCAAAGTAATGATCAGAATTCCAGAGACCGCCGGCATAAGCGCATGATCAAGAATAGAGAGTCAGCTGCTCGCTCCAGAGCCCGAAAGCAGGAACCTTTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009314 GO:0009416 GO:0009628 GO:0009648 GO:0009889 GO:0009891 GO:0009893 GO:0009909 GO:0009911 GO:0010033 GO:0010200 GO:0010243 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0042221 GO:0042493 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043621 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0048580 GO:0048582 GO:0048583 GO:0048831 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051171 GO:0051173 GO:0051239 GO:0051240 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1901698 GO:1901700 GO:1902680 GO:1903506 GO:1903508 GO:2000026 GO:2000028 GO:2000112 GO:2000241 GO:2000243 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

bZIP_1

Protein Analysis

194

Amino Acids

21.44

Weight (kDa)

9.62

Isoelectric Point (pI)

69.5

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000739)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G35900 AT4G35900
fragaria_vesca	FvH4_1g11270 FvH4_1g11270 FvH4_2g38080 FvH4_2g38080
malus_domestica	MD02G1125100.v1.1 MD15G1008300.v1.1 MD15G1240800.v1.1
prunus_persica	Prupe.1G361100_v2.0.a1 Prupe.7G173300_v2.0.a1
pyrus_communis	pycom02g09770 pycom08g00780 pycom15g00670 pycom15g21240
rosa_chinensis	RchiOBHm_Chr2g0098731 RchiOBHm_Chr5g0020811 RchiOBHm_Chr5g0069801 RchiOBHm_Chr6g0303481
rosa_laevigata	RLG00000001084 RLG00000001969 RLG00000004672 RLG00000011081 RLG00000015050 RLG00000015656 RLG00000016824 RLG00000024869 RLG00000030190 RLG00000033969 RLG00000035356
rosa_multiflora	Rmu_sc0002776.1_g000024 Rmu_ssc0000114.1_g000047
rosa_roxburghii	Rroxscaffold_2G00107580 Rroxscaffold_2G00143780 Rroxscaffold_7G00164710 Rroxscaffold_7G00172730
rosa_rugosa	Rorug02G0074200 Rorug06G0321600 Rorug06G0321700
rosa_samantha	Rh1AG062500 Rh1BG080000 Rh1DG103800 Rh2AG122100 Rh2BG125600 Rh2CG116700 Rh2CG126700 Rh2CG345200 Rh2DG127700 Rh3DG072100 Rh5CG499500 Rh6AG436100 Rh6BG117000 Rh6BG117100 Rh6BG117200 Rh6BG467400 Rh6CG115500 Rh6CG115600 Rh6CG198000 Rh6CG448100 Rh6DG104000 Rh6DG434700 Rh7AG017700 Rh7AG193200 Rh7AG263200 Rh7BG017300 Rh7BG449800 Rh7DG018000 Rh7DG269900
rosa_wichuraiana	Rw0G004200 Rw5G015480 Rw6G037740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	296
AciI	CCGC	3 cut(s)	294, 354, 508
AcsI	RAATTY	2 cut(s)	247, 496
AfaI	GTAC	1 cut(s)	292
AfiI	CCNNNNNNNGG	1 cut(s)	568
AgsI	TTSAA	4 cut(s)	152, 247, 260, 313
AhlI	ACTAGT	2 cut(s)	287, 344
AluBI	AGCT	3 cut(s)	243, 390, 545
AluI	AGCT	3 cut(s)	243, 390, 545
Alw26I	GTCTC	1 cut(s)	498
AlwNI	CAGNNNCTG	1 cut(s)	233
AoxI	GGCC	2 cut(s)	193, 455
ApeKI	GCWGC	7 cut(s)	119, 122, 125, 128, 221, 390, 545
ApoI	RAATTY	2 cut(s)	247, 496
AspLEI	GCGC	1 cut(s)	522
AspS9I	GGNCC	2 cut(s)	193, 456
BanII	GRGCYC	1 cut(s)	562
BbvI	GCAGC	7 cut(s)	106, 109, 112, 115, 233, 377, 532
BclI	TGATCA	2 cut(s)	490, 525
BcoDI	GTCTC	1 cut(s)	498
BcuI	ACTAGT	2 cut(s)	287, 344
BfaI	CTAG	2 cut(s)	288, 345
BisI	GCNGC	8 cut(s)	120, 123, 126, 129, 222, 354, 391, 546
BlsI	GCNGC	8 cut(s)	121, 124, 127, 130, 223, 355, 392, 547
BmgT120I	GGNCC	2 cut(s)	193, 456
BmiI	GGNNCC	1 cut(s)	573
BmsI	GCATC	1 cut(s)	388
BpmI	CTGGAG	1 cut(s)	538
BsaBI	GATNNNNATC	1 cut(s)	468
BsaI	GGTCTC	1 cut(s)	498
BsaJI	CCNNGG	2 cut(s)	42, 100
Bsc4I	CCNNNNNNNGG	1 cut(s)	568
Bse118I	RCCGGY	1 cut(s)	510
Bse8I	GATNNNNATC	1 cut(s)	468
BseDI	CCNNGG	2 cut(s)	42, 100
BseGI	GGATG	1 cut(s)	20
BseJI	GATNNNNATC	1 cut(s)	468
BseLI	CCNNNNNNNGG	1 cut(s)	568
BseRI	GAGGAG	1 cut(s)	294
BseXI	GCAGC	7 cut(s)	106, 109, 112, 115, 233, 377, 532
BshFI	GGCC	2 cut(s)	195, 457
BsiSI	CCGG	2 cut(s)	116, 511
BslI	CCNNNNNNNGG	1 cut(s)	568
BsmAI	GTCTC	1 cut(s)	498
BsnI	GGCC	2 cut(s)	195, 457
Bso31I	GGTCTC	1 cut(s)	498
Bsp1286I	GDGCHC	1 cut(s)	562
Bsp143I	GATC	4 cut(s)	3, 463, 490, 525
Bsp19I	CCATGG	1 cut(s)	42
BspACI	CCGC	3 cut(s)	294, 354, 508
BspANI	GGCC	2 cut(s)	195, 457
BspLI	GGNNCC	1 cut(s)	573
BspTNI	GGTCTC	1 cut(s)	498
BsrBI	CCGCTC	1 cut(s)	296
BsrFI	RCCGGY	1 cut(s)	510
BssAI	RCCGGY	1 cut(s)	510
BssECI	CCNNGG	2 cut(s)	42, 100
BssMI	GATC	4 cut(s)	3, 463, 490, 525
BssT1I	CCWWGG	1 cut(s)	42
Bst4CI	ACNGT	2 cut(s)	104, 235
Bst6I	CTCTTC	2 cut(s)	388, 418
BstC8I	GCNNGC	2 cut(s)	512, 550
BstDEI	CTNAG	1 cut(s)	239
BstDSI	CCRYGG	2 cut(s)	42, 100
BstF5I	GGATG	1 cut(s)	20
BstHHI	GCGC	1 cut(s)	522
BstKTI	GATC	4 cut(s)	6, 466, 493, 528
BstMAI	GTCTC	1 cut(s)	498
BstMBI	GATC	4 cut(s)	3, 463, 490, 525
BstMWI	GCNNNNNNNGC	4 cut(s)	125, 128, 170, 227
BstV1I	GCAGC	7 cut(s)	106, 109, 112, 115, 233, 377, 532
BsuRI	GGCC	2 cut(s)	195, 457
BtgI	CCRYGG	2 cut(s)	42, 100
BtsCI	GGATG	1 cut(s)	20
BtsI	GCAGTG	1 cut(s)	106
BtsIMutI	CAGTG	2 cut(s)	106, 231
Cac8I	GCNNGC	2 cut(s)	512, 550
CaiI	CAGNNNCTG	1 cut(s)	233
CfoI	GCGC	1 cut(s)	522
Cfr10I	RCCGGY	1 cut(s)	510
Cfr13I	GGNCC	2 cut(s)	193, 456
Csp6I	GTAC	1 cut(s)	291
CspCI	CAANNNNNGTGG	2 cut(s)	318, 353
CviAII	CATG	6 cut(s)	43, 86, 142, 350, 425, 523
CviJI	RGCY	9 cut(s)	69, 119, 195, 230, 243, 390, 457, 545, 560
CviKI_1	RGCY	9 cut(s)	69, 119, 195, 230, 243, 390, 457, 545, 560
CviQI	GTAC	1 cut(s)	291
DdeI	CTNAG	1 cut(s)	239
DpnI	GATC	4 cut(s)	5, 465, 492, 527
DpnII	GATC	4 cut(s)	3, 463, 490, 525
Eam1104I	CTCTTC	2 cut(s)	388, 418
EarI	CTCTTC	2 cut(s)	388, 418
Eco130I	CCWWGG	1 cut(s)	42
Eco24I	GRGCYC	1 cut(s)	562
Eco31I	GGTCTC	1 cut(s)	498
EcoRI	GAATTC	2 cut(s)	247, 496
EcoT14I	CCWWGG	1 cut(s)	42
EcoT38I	GRGCYC	1 cut(s)	562
ErhI	CCWWGG	1 cut(s)	42
FaeI	CATG	6 cut(s)	46, 89, 145, 353, 428, 526
FaiI	YATR	9 cut(s)	35, 44, 87, 143, 351, 426, 461, 516, 524
FalI	AAGNNNNNCTT	2 cut(s)	58, 90
FatI	CATG	6 cut(s)	42, 85, 141, 349, 424, 522
FbaI	TGATCA	2 cut(s)	490, 525
Fnu4HI	GCNGC	8 cut(s)	120, 123, 126, 129, 222, 354, 391, 546
FokI	GGATG	1 cut(s)	7
FriOI	GRGCYC	1 cut(s)	562
Fsp4HI	GCNGC	8 cut(s)	120, 123, 126, 129, 222, 354, 391, 546
FspBI	CTAG	2 cut(s)	288, 345
GlaI	GCGC	1 cut(s)	521
GluI	GCNGC	8 cut(s)	120, 123, 126, 129, 222, 354, 391, 546
GsuI	CTGGAG	1 cut(s)	538
HaeIII	GGCC	2 cut(s)	195, 457
HapII	CCGG	2 cut(s)	116, 511
HhaI	GCGC	1 cut(s)	522
Hin1II	CATG	6 cut(s)	46, 89, 145, 353, 428, 526
Hin6I	GCGC	1 cut(s)	520
HinP1I	GCGC	1 cut(s)	520
HinfI	GANTC	2 cut(s)	407, 539
HpaII	CCGG	2 cut(s)	116, 511
Hpy188I	TCNGA	3 cut(s)	253, 397, 495
Hpy188III	TCNNGA	5 cut(s)	152, 269, 501, 529, 555
HpyAV	CCTTC	3 cut(s)	275, 372, 441
HpyCH4III	ACNGT	2 cut(s)	104, 235
HpyCH4V	TGCA	2 cut(s)	221, 340
HpyF10VI	GCNNNNNNNGC	4 cut(s)	125, 128, 170, 227
HpyF3I	CTNAG	1 cut(s)	239
Hsp92II	CATG	6 cut(s)	46, 89, 145, 353, 428, 526
HspAI	GCGC	1 cut(s)	520
KroI	GCCGGC	1 cut(s)	510
KroNI	GCCGGC	1 cut(s)	512
Ksp22I	TGATCA	2 cut(s)	490, 525
Kzo9I	GATC	4 cut(s)	3, 463, 490, 525
LmnI	GCTCC	4 cut(s)	301, 307, 398, 557
LpnPI	CCDG	9 cut(s)	129, 240, 282, 312, 400, 514, 524, 554, 568
Lsp1109I	GCAGC	7 cut(s)	106, 109, 112, 115, 233, 377, 532
LweI	GCATC	1 cut(s)	388
MaeI	CTAG	2 cut(s)	288, 345
MaeIII	GTNAC	1 cut(s)	104
MalI	GATC	4 cut(s)	5, 465, 492, 527
MbiI	CCGCTC	1 cut(s)	296
MboI	GATC	4 cut(s)	3, 463, 490, 525
MboII	GAAGA	5 cut(s)	59, 151, 168, 375, 405
MfeI	CAATTG	1 cut(s)	216
MhlI	GDGCHC	1 cut(s)	562
MluCI	AATT	3 cut(s)	216, 247, 496
MlyI	GAGTC	1 cut(s)	548
MmeI	TCCRAC	1 cut(s)	204
MnlI	CCTC	4 cut(s)	123, 216, 315, 421
MroNI	GCCGGC	1 cut(s)	510
MseI	TTAA	1 cut(s)	324
MslI	CAYNNNNRTG	1 cut(s)	90
MspA1I	CMGCKG	2 cut(s)	390, 545
MspI	CCGG	2 cut(s)	116, 511
MunI	CAATTG	1 cut(s)	216
MwoI	GCNNNNNNNGC	4 cut(s)	125, 128, 170, 227
NaeI	GCCGGC	1 cut(s)	512
NcoI	CCATGG	1 cut(s)	42
NdeII	GATC	4 cut(s)	3, 463, 490, 525
NgoMIV	GCCGGC	1 cut(s)	510
NlaIII	CATG	6 cut(s)	46, 89, 145, 353, 428, 526
NlaIV	GGNNCC	1 cut(s)	573
NmuCI	GTSAC	1 cut(s)	104
PdiI	GCCGGC	1 cut(s)	512
PfeI	GAWTC	1 cut(s)	407
PkrI	GCNGC	8 cut(s)	121, 124, 127, 130, 223, 355, 392, 547
PleI	GAGTC	1 cut(s)	547
PpsI	GAGTC	1 cut(s)	547
PspN4I	GGNNCC	1 cut(s)	573
PspPI	GGNCC	2 cut(s)	193, 456
PstNI	CAGNNNCTG	1 cut(s)	233
PvuII	CAGCTG	2 cut(s)	390, 545
RsaI	GTAC	1 cut(s)	292
RsaNI	GTAC	1 cut(s)	291
RseI	CAYNNNNRTG	1 cut(s)	90
SaqAI	TTAA	1 cut(s)	324
SatI	GCNGC	8 cut(s)	120, 123, 126, 129, 222, 354, 391, 546
Sau3AI	GATC	4 cut(s)	3, 463, 490, 525
Sau96I	GGNCC	2 cut(s)	193, 456
SchI	GAGTC	1 cut(s)	548
SduI	GDGCHC	1 cut(s)	562
SetI	ASST	5 cut(s)	208, 245, 392, 547, 577
SfaNI	GCATC	1 cut(s)	388
SmiMI	CAYNNNNRTG	1 cut(s)	90
SpeI	ACTAGT	2 cut(s)	287, 344
Sse9I	AATT	3 cut(s)	216, 247, 496
SsiI	CCGC	3 cut(s)	294, 354, 508
SspMI	CTAG	2 cut(s)	288, 345
StyI	CCWWGG	1 cut(s)	42
TaaI	ACNGT	2 cut(s)	104, 235
TasI	AATT	3 cut(s)	216, 247, 496
TauI	GCSGC	1 cut(s)	356
TfiI	GAWTC	1 cut(s)	407
Tru1I	TTAA	1 cut(s)	324
Tru9I	TTAA	1 cut(s)	324
TscAI	CASTG	2 cut(s)	113, 238
TseFI	GTSAC	1 cut(s)	104
TseI	GCWGC	7 cut(s)	119, 122, 125, 128, 221, 390, 545
Tsp45I	GTSAC	1 cut(s)	104
TspDTI	ATGAA	2 cut(s)	359, 413
TspRI	CASTG	2 cut(s)	113, 238
XapI	RAATTY	2 cut(s)	247, 496
XspI	CTAG	2 cut(s)	288, 345

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.