Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0000739

Physical Location & Seq

Genomic Coordinates Reverse (-)

17373758 .. 17375071

Gene Structure 1314 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G173300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 972 bp

ATGTTGTCATCAACATCAACTGGTAGAGGTAGTAGTGACCAAACCAACTACAACACAACCAGCAACAACAGTACTAATACCCCAAAGAGAGTAGCTTCTTCATCCACCAATTCATCTTGGTCCTCATCATCCCCTTCCCCTTTTTCACACCAACCCTTTTCCCTCCAAACCCCCCAGAGAACCATGGAAGAGGTTTGGAAAGACATCAATCTTGCCTCTCTCTCTGAGACCACCCCAAACAGGAGATCATCACTCCTTCACCACATTAATCTCCCTCATGGAACCCACGACCCAAACTTCAGAAATCTTCAAGACTTCCTTGCTAGACCCTTTTCCCACAATGAACCTCCAGTCAGCTTGGTCTCCACACCCACTGAACAGGCCACTCTCAACAGCCCTGCCTCTCCTCCTCTGCCTCCACCAGGCCCTCCCCCTGTTCTCAGCTTGACCAATTCTGGCTCTGATCACTTTCAGCTTTTCTATGTCTCTGACCCTCTTATTAGGCCTCCCTCCTCAGAGTTTCATCCTCATCACCGTCAGTCTAACCCCAACAACATTTCTAGTAGTGTTTCTAATTCTTTCAGTGCTTCCCCATTTGAGAGCTTGGCTGCTTCCTCTTCTGGCTTGCCTTCTTTTGGGAAGAGAGCATTCCCTGACTCTGATCACAGCAACTCGGGAGGAGATCGAAGACATAATCGCATGATCAAGAACAGAGAATCTGCTGCTCGATCTAGAGCCAGGAAGCAGGAATTCTTGCTTTTTTTGTGTTTTGGACTGTCTTTTGCTTTTTATGTTTTTATGATTTCTGGTTGGTACCAACAGGCTTACACAAATGAGTTGGAGCTAGAAGTTGCACATTTGATGGAAGAAAATACAAGACTCAAAAGGCAGCAAGAACAGTTATGTTTTGCAGCAGCTTCTCAACAACCCAAAAAGCACAATCTTCATCGATCCTCAACAGCTCCATTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009314 GO:0009416 GO:0009628 GO:0009648 GO:0009889 GO:0009891 GO:0009893 GO:0009909 GO:0009911 GO:0010033 GO:0010200 GO:0010243 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0042221 GO:0042493 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043621 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0048580 GO:0048582 GO:0048583 GO:0048831 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051171 GO:0051173 GO:0051239 GO:0051240 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1901698 GO:1901700 GO:1902680 GO:1903506 GO:1903508 GO:2000026 GO:2000028 GO:2000112 GO:2000241 GO:2000243 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

bZIP_1

Protein Analysis

324

Amino Acids

35.88

Weight (kDa)

9.2

Isoelectric Point (pI)

72.0

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000739)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G35900 AT4G35900
fragaria_vesca	FvH4_1g11270 FvH4_1g11270 FvH4_2g38080 FvH4_2g38080
malus_domestica	MD02G1125100.v1.1 MD15G1008300.v1.1 MD15G1240800.v1.1
prunus_persica	Prupe.1G361100_v2.0.a1 Prupe.7G173300_v2.0.a1
pyrus_communis	pycom02g09770 pycom08g00780 pycom15g00670 pycom15g21240
rosa_chinensis	RchiOBHm_Chr2g0098731 RchiOBHm_Chr5g0020811 RchiOBHm_Chr5g0069801 RchiOBHm_Chr6g0303481
rosa_laevigata	RLG00000001084 RLG00000001969 RLG00000004672 RLG00000011081 RLG00000015050 RLG00000015656 RLG00000016824 RLG00000024869 RLG00000030190 RLG00000033969 RLG00000035356
rosa_multiflora	Rmu_sc0002776.1_g000024 Rmu_ssc0000114.1_g000047
rosa_roxburghii	Rroxscaffold_2G00107580 Rroxscaffold_2G00143780 Rroxscaffold_7G00164710 Rroxscaffold_7G00172730
rosa_rugosa	Rorug02G0074200 Rorug06G0321600 Rorug06G0321700
rosa_samantha	Rh1AG062500 Rh1BG080000 Rh1DG103800 Rh2AG122100 Rh2BG125600 Rh2CG116700 Rh2CG126700 Rh2CG345200 Rh2DG127700 Rh3DG072100 Rh5CG499500 Rh6AG436100 Rh6BG117000 Rh6BG117100 Rh6BG117200 Rh6BG467400 Rh6CG115500 Rh6CG115600 Rh6CG198000 Rh6CG448100 Rh6DG104000 Rh6DG434700 Rh7AG017700 Rh7AG193200 Rh7AG263200 Rh7BG017300 Rh7BG449800 Rh7DG018000 Rh7DG269900
rosa_wichuraiana	Rw0G004200 Rw5G015480 Rw6G037740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	813
AccB1I	GGYRCC	1 cut(s)	813
AclWI	GGATC	1 cut(s)	945
AcsI	RAATTY	1 cut(s)	749
AcuI	CTGAAG	1 cut(s)	283
AfaI	GTAC	2 cut(s)	73, 815
AfiI	CCNNNNNNNGG	3 cut(s)	240, 422, 635
AgsI	TTSAA	1 cut(s)	311
AjnI	CCWGG	2 cut(s)	421, 737
AluBI	AGCT	8 cut(s)	95, 357, 444, 475, 603, 844, 917, 962
AluI	AGCT	8 cut(s)	95, 357, 444, 475, 603, 844, 917, 962
Alw26I	GTCTC	3 cut(s)	221, 367, 490
AlwI	GGATC	1 cut(s)	945
Ama87I	CYCGRG	1 cut(s)	673
AoxI	GGCC	3 cut(s)	381, 424, 503
ApeKI	GCWGC	5 cut(s)	608, 722, 889, 911, 914
ApoI	RAATTY	1 cut(s)	749
AseI	ATTAAT	1 cut(s)	267
Asp718I	GGTACC	1 cut(s)	813
AspS9I	GGNCC	2 cut(s)	120, 425
AsuHPI	GGTGA	2 cut(s)	251, 524
AvaI	CYCGRG	1 cut(s)	673
AvaII	GGWCC	1 cut(s)	120
BanI	GGYRCC	1 cut(s)	813
BbsI	GAAGAC	1 cut(s)	694
BbvI	GCAGC	5 cut(s)	595, 709, 901, 923, 926
BccI	CCATC	1 cut(s)	856
BciT130I	CCWGG	2 cut(s)	423, 739
BclI	TGATCA	3 cut(s)	463, 661, 702
BcoDI	GTCTC	3 cut(s)	221, 367, 490
BfaI	CTAG	4 cut(s)	324, 561, 732, 845
BisI	GCNGC	5 cut(s)	609, 723, 890, 912, 915
BlsI	GCNGC	5 cut(s)	610, 724, 891, 913, 916
BmcAI	AGTACT	1 cut(s)	73
Bme1390I	CCNGG	2 cut(s)	423, 739
Bme18I	GGWCC	1 cut(s)	120
BmeT110I	CYCGRG	1 cut(s)	673
BmgT120I	GGNCC	2 cut(s)	120, 425
BmiI	GGNNCC	2 cut(s)	283, 815
BmrFI	CCNGG	2 cut(s)	423, 739
BpiI	GAAGAC	1 cut(s)	694
BpmI	CTGGAG	1 cut(s)	333
Bsa29I	ATCGAT	1 cut(s)	949
BsaI	GGTCTC	2 cut(s)	221, 367
BsaJI	CCNNGG	1 cut(s)	183
Bsc4I	CCNNNNNNNGG	3 cut(s)	240, 422, 635
Bse1I	ACTGG	2 cut(s)	25, 350
BseBI	CCWGG	2 cut(s)	423, 739
BseCI	ATCGAT	1 cut(s)	949
BseDI	CCNNGG	1 cut(s)	183
BseGI	GGATG	3 cut(s)	101, 128, 523
BseLI	CCNNNNNNNGG	3 cut(s)	240, 422, 635
BseMII	CTCAG	3 cut(s)	216, 454, 528
BseNI	ACTGG	2 cut(s)	25, 350
BseRI	GAGGAG	4 cut(s)	396, 399, 502, 693
BseXI	GCAGC	5 cut(s)	595, 709, 901, 923, 926
BshFI	GGCC	3 cut(s)	383, 426, 505
BshNI	GGYRCC	1 cut(s)	813
BshVI	ATCGAT	1 cut(s)	949
BsiHKCI	CYCGRG	1 cut(s)	673
BslI	CCNNNNNNNGG	3 cut(s)	240, 422, 635
BsmAI	GTCTC	3 cut(s)	221, 367, 490
BsmI	GAATGC	1 cut(s)	647
BsnI	GGCC	3 cut(s)	383, 426, 505
Bso31I	GGTCTC	2 cut(s)	221, 367
BsoBI	CYCGRG	1 cut(s)	673
Bsp143I	GATC	7 cut(s)	245, 463, 661, 682, 702, 728, 950
Bsp19I	CCATGG	1 cut(s)	183
BspANI	GGCC	3 cut(s)	383, 426, 505
BspCNI	CTCAG	3 cut(s)	217, 453, 527
BspDI	ATCGAT	1 cut(s)	949
BspLI	GGNNCC	2 cut(s)	283, 815
BspPI	GGATC	1 cut(s)	945
BspT107I	GGYRCC	1 cut(s)	813
BspTNI	GGTCTC	2 cut(s)	221, 367
BsrI	ACTGG	2 cut(s)	25, 350
BssECI	CCNNGG	1 cut(s)	183
BssMI	GATC	7 cut(s)	245, 463, 661, 682, 702, 728, 950
BssT1I	CCWWGG	1 cut(s)	183
Bst2UI	CCWGG	2 cut(s)	423, 739
Bst4CI	ACNGT	4 cut(s)	71, 536, 777, 900
Bst6I	CTCTTC	3 cut(s)	183, 622, 635
BstC8I	GCNNGC	1 cut(s)	626
BstDEI	CTNAG	3 cut(s)	225, 440, 514
BstDSI	CCRYGG	1 cut(s)	183
BstENI	CCTNNNNNAGG	1 cut(s)	420
BstF5I	GGATG	3 cut(s)	101, 128, 523
BstKTI	GATC	7 cut(s)	248, 466, 664, 685, 705, 731, 953
BstMAI	GTCTC	3 cut(s)	221, 367, 490
BstMBI	GATC	7 cut(s)	245, 463, 661, 682, 702, 728, 950
BstNI	CCWGG	2 cut(s)	423, 739
BstSCI	CCNGG	2 cut(s)	421, 737
BstV1I	GCAGC	5 cut(s)	595, 709, 901, 923, 926
BstV2I	GAAGAC	1 cut(s)	694
Bsu15I	ATCGAT	1 cut(s)	949
BsuRI	GGCC	3 cut(s)	383, 426, 505
BsuTUI	ATCGAT	1 cut(s)	949
BtgI	CCRYGG	1 cut(s)	183
BtsCI	GGATG	3 cut(s)	101, 128, 523
BtsIMutI	CAGTG	2 cut(s)	372, 589
Cac8I	GCNNGC	1 cut(s)	626
Cfr13I	GGNCC	2 cut(s)	120, 425
ClaI	ATCGAT	1 cut(s)	949
Csp6I	GTAC	2 cut(s)	72, 814
CviAII	CATG	3 cut(s)	184, 278, 700
CviQI	GTAC	2 cut(s)	72, 814
DdeI	CTNAG	3 cut(s)	225, 440, 514
DpnI	GATC	7 cut(s)	247, 465, 663, 684, 704, 730, 952
DpnII	GATC	7 cut(s)	245, 463, 661, 682, 702, 728, 950
Eam1104I	CTCTTC	3 cut(s)	183, 622, 635
EarI	CTCTTC	3 cut(s)	183, 622, 635
Eco130I	CCWWGG	1 cut(s)	183
Eco147I	AGGCCT	1 cut(s)	505
Eco31I	GGTCTC	2 cut(s)	221, 367
Eco47I	GGWCC	1 cut(s)	120
Eco57I	CTGAAG	1 cut(s)	283
Eco88I	CYCGRG	1 cut(s)	673
EcoNI	CCTNNNNNAGG	1 cut(s)	420
EcoO109I	RGGNCCY	1 cut(s)	425
EcoRI	GAATTC	1 cut(s)	749
EcoRII	CCWGG	2 cut(s)	421, 737
EcoT14I	CCWWGG	1 cut(s)	183
ErhI	CCWWGG	1 cut(s)	183
FaeI	CATG	3 cut(s)	187, 281, 703
FaiI	YATR	8 cut(s)	185, 279, 483, 693, 701, 792, 800, 904
FalI	AAGNNNNNCTT	2 cut(s)	303, 335
FatI	CATG	3 cut(s)	183, 277, 699
FbaI	TGATCA	3 cut(s)	463, 661, 702
Fnu4HI	GCNGC	5 cut(s)	609, 723, 890, 912, 915
FokI	GGATG	3 cut(s)	88, 115, 510
Fsp4HI	GCNGC	5 cut(s)	609, 723, 890, 912, 915
FspBI	CTAG	4 cut(s)	324, 561, 732, 845
GluI	GCNGC	5 cut(s)	609, 723, 890, 912, 915
GsuI	CTGGAG	1 cut(s)	333
HaeIII	GGCC	3 cut(s)	383, 426, 505
Hin1II	CATG	3 cut(s)	187, 281, 703
HinfI	GANTC	3 cut(s)	656, 716, 879
HphI	GGTGA	2 cut(s)	251, 524
Hpy188I	TCNGA	6 cut(s)	226, 302, 463, 490, 517, 661
Hpy188III	TCNNGA	4 cut(s)	311, 675, 706, 732
HpyAV	CCTTC	3 cut(s)	144, 266, 639
HpyCH4III	ACNGT	4 cut(s)	71, 536, 777, 900
HpyCH4V	TGCA	2 cut(s)	854, 911
HpyF3I	CTNAG	3 cut(s)	225, 440, 514
Hsp92II	CATG	3 cut(s)	187, 281, 703
KpnI	GGTACC	1 cut(s)	817
Ksp22I	TGATCA	3 cut(s)	463, 661, 702
Kzo9I	GATC	7 cut(s)	245, 463, 661, 682, 702, 728, 950
LmnI	GCTCC	2 cut(s)	841, 967
Lsp1109I	GCAGC	5 cut(s)	595, 709, 901, 923, 926
MaeI	CTAG	4 cut(s)	324, 561, 732, 845
MaeIII	GTNAC	1 cut(s)	35
MalI	GATC	7 cut(s)	247, 465, 663, 684, 704, 730, 952
MboI	GATC	7 cut(s)	245, 463, 661, 682, 702, 728, 950
MboII	GAAGA	8 cut(s)	90, 200, 299, 609, 652, 699, 878, 935
MluCI	AATT	4 cut(s)	109, 451, 574, 749
MlyI	GAGTC	2 cut(s)	650, 873
MmeI	TCCRAC	1 cut(s)	819
MseI	TTAA	1 cut(s)	267
MspR9I	CCNGG	2 cut(s)	423, 739
Mva1269I	GAATGC	1 cut(s)	647
MvaI	CCWGG	2 cut(s)	423, 739
NcoI	CCATGG	1 cut(s)	183
NdeII	GATC	7 cut(s)	245, 463, 661, 682, 702, 728, 950
NlaIII	CATG	3 cut(s)	187, 281, 703
NlaIV	GGNNCC	2 cut(s)	283, 815
NmuCI	GTSAC	1 cut(s)	35
PceI	AGGCCT	1 cut(s)	505
PctI	GAATGC	1 cut(s)	647
PfeI	GAWTC	1 cut(s)	716
PkrI	GCNGC	5 cut(s)	610, 724, 891, 913, 916
PleI	GAGTC	2 cut(s)	650, 873
PpsI	GAGTC	2 cut(s)	650, 873
PshBI	ATTAAT	1 cut(s)	267
Psp6I	CCWGG	2 cut(s)	421, 737
PspGI	CCWGG	2 cut(s)	421, 737
PspN4I	GGNNCC	2 cut(s)	283, 815
PspPI	GGNCC	2 cut(s)	120, 425
RsaI	GTAC	2 cut(s)	73, 815
RsaNI	GTAC	2 cut(s)	72, 814
SaqAI	TTAA	1 cut(s)	267
SatI	GCNGC	5 cut(s)	609, 723, 890, 912, 915
Sau3AI	GATC	7 cut(s)	245, 463, 661, 682, 702, 728, 950
Sau96I	GGNCC	2 cut(s)	120, 425
ScaI	AGTACT	1 cut(s)	73
SchI	GAGTC	2 cut(s)	650, 873
ScrFI	CCNGG	2 cut(s)	423, 739
SinI	GGWCC	1 cut(s)	120
Sse9I	AATT	4 cut(s)	109, 451, 574, 749
SseBI	AGGCCT	1 cut(s)	505
SspMI	CTAG	4 cut(s)	324, 561, 732, 845
StuI	AGGCCT	1 cut(s)	505
StyD4I	CCNGG	2 cut(s)	421, 737
StyI	CCWWGG	1 cut(s)	183
TaaI	ACNGT	4 cut(s)	71, 536, 777, 900
TaqI	TCGA	3 cut(s)	685, 727, 949
TasI	AATT	4 cut(s)	109, 451, 574, 749
TatI	WGTACW	1 cut(s)	71
TfiI	GAWTC	1 cut(s)	716
Tru1I	TTAA	1 cut(s)	267
Tru9I	TTAA	1 cut(s)	267
TscAI	CASTG	2 cut(s)	379, 589
TseFI	GTSAC	1 cut(s)	35
TseI	GCWGC	5 cut(s)	608, 722, 889, 911, 914
Tsp45I	GTSAC	1 cut(s)	35
TspDTI	ATGAA	5 cut(s)	90, 102, 357, 512, 935
TspRI	CASTG	2 cut(s)	379, 589
VpaK11BI	GGWCC	1 cut(s)	120
VspI	ATTAAT	1 cut(s)	267
XagI	CCTNNNNNAGG	1 cut(s)	420
XapI	RAATTY	1 cut(s)	749
XbaI	TCTAGA	1 cut(s)	731
XspI	CTAG	4 cut(s)	324, 561, 732, 845
ZrmI	AGTACT	1 cut(s)	73

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.