Rh7AG193200
BZIP Family

basic region leucin zipper

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
Physical Location & Seq
Reverse (-)
17276449 .. 17277932
1484 bp
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UTR
Exon/CDS
Intron
Rh7AG193200.1

Sequence Viewer

Length: 201 bp
ATGATGTTATCAGACAGATGGCAGAAGAGAATGATAAAGAACCGGGAATCTGCTGCTCGTTCACGTGCAAGGAAGCAGGCTTATACAAATGAACTGGAGAACAGAGTTTCACATCTGGAGGAGGAAAATGAAAGGCTAAGGAAGCAAAAGACGCATTGTTGGGAATTAAGGATTTATTCCTTAAGCATCCAGAAGAGATGA

Protein Analysis

66

Amino Acids

8.22

Weight (kDa)

10.41

Isoelectric Point (pI)

60.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
bZIP_2 PF07716 5 - 49 9.8e-14 Basic region leucine zipper
bZIP_1 PF00170 6 - 49 8.4e-16 bZIP transcription factor
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcvI CACGTG 1 cut(s) 65
AflII CTTAAG 1 cut(s) 181
ApeKI GCWGC 1 cut(s) 53
AsuC2I CCSGG 1 cut(s) 44
BbrPI CACGTG 1 cut(s) 65
BbvI GCAGC 1 cut(s) 40
BccI CCATC 1 cut(s) 12
BcnI CCSGG 1 cut(s) 44
BfrI CTTAAG 1 cut(s) 181
BisI GCNGC 1 cut(s) 54
BlsI GCNGC 1 cut(s) 55
Bme1390I CCNGG 1 cut(s) 44
BmrFI CCNGG 1 cut(s) 44
BmsI GCATC 1 cut(s) 195
BpmI CTGGAG 2 cut(s) 116, 137
Bpu10I CCTNAGC 1 cut(s) 137
BpuMI CCSGG 1 cut(s) 44
BsaAI YACGTR 1 cut(s) 65
Bse1I ACTGG 1 cut(s) 99
BseGI GGATG 1 cut(s) 186
BseNI ACTGG 1 cut(s) 99
BseRI GAGGAG 1 cut(s) 134
BseXI GCAGC 1 cut(s) 40
BsiSI CCGG 1 cut(s) 43
BspTI CTTAAG 1 cut(s) 181
BsrI ACTGG 1 cut(s) 99
Bst6I CTCTTC 2 cut(s) 20, 188
BstAFI CTTAAG 1 cut(s) 181
BstBAI YACGTR 1 cut(s) 65
BstC8I GCNNGC 1 cut(s) 78
BstDEI CTNAG 1 cut(s) 137
BstF5I GGATG 1 cut(s) 186
BstMWI GCNNNNNNNGC 2 cut(s) 142, 151
BstSCI CCNGG 1 cut(s) 42
BstV1I GCAGC 1 cut(s) 40
BtsCI GGATG 1 cut(s) 186
Cac8I GCNNGC 1 cut(s) 78
CseI GACGC 1 cut(s) 160
CviJI RGCY 2 cut(s) 80, 136
CviKI_1 RGCY 2 cut(s) 80, 136
DdeI CTNAG 1 cut(s) 137
Eam1104I CTCTTC 2 cut(s) 20, 188
EarI CTCTTC 2 cut(s) 20, 188
Eco72I CACGTG 1 cut(s) 65
FaiI YATR 1 cut(s) 84
Fnu4HI GCNGC 1 cut(s) 54
FokI GGATG 1 cut(s) 173
Fsp4HI GCNGC 1 cut(s) 54
GluI GCNGC 1 cut(s) 54
GsuI CTGGAG 2 cut(s) 116, 137
HapII CCGG 1 cut(s) 43
HgaI GACGC 1 cut(s) 160
HinfI GANTC 1 cut(s) 47
HpaII CCGG 1 cut(s) 43
Hpy166II GTNNAC 1 cut(s) 62
Hpy188I TCNGA 1 cut(s) 13
Hpy188III TCNNGA 2 cut(s) 116, 190
Hpy8I GTNNAC 1 cut(s) 62
HpyCH4IV ACGT 1 cut(s) 64
HpyCH4V TGCA 1 cut(s) 68
HpyF10VI GCNNNNNNNGC 2 cut(s) 142, 151
HpyF3I CTNAG 1 cut(s) 137
HpySE526I ACGT 1 cut(s) 64
LpnPI CCDG 4 cut(s) 56, 62, 80, 101
Lsp1109I GCAGC 1 cut(s) 40
LweI GCATC 1 cut(s) 195
MaeII ACGT 1 cut(s) 64
MboII GAAGA 1 cut(s) 37
MluCI AATT 1 cut(s) 164
MnlI CCTC 2 cut(s) 112, 115
MseI TTAA 2 cut(s) 167, 182
MspCI CTTAAG 1 cut(s) 181
MspI CCGG 1 cut(s) 43
MspR9I CCNGG 1 cut(s) 44
MwoI GCNNNNNNNGC 2 cut(s) 142, 151
NciI CCSGG 1 cut(s) 44
PfeI GAWTC 1 cut(s) 47
PkrI GCNGC 1 cut(s) 55
PmaCI CACGTG 1 cut(s) 65
PmlI CACGTG 1 cut(s) 65
Ppu21I YACGTR 1 cut(s) 65
PspCI CACGTG 1 cut(s) 65
SaqAI TTAA 2 cut(s) 167, 182
SatI GCNGC 1 cut(s) 54
ScrFI CCNGG 1 cut(s) 44
SetI ASST 1 cut(s) 67
SfaNI GCATC 1 cut(s) 195
SgeI CNNG 9 cut(s) 55, 56, 69, 75, 77, 81, 89, 107, 128
SmlI CTYRAG 1 cut(s) 181
SmoI CTYRAG 1 cut(s) 181
Sse9I AATT 1 cut(s) 164
StyD4I CCNGG 1 cut(s) 42
TaiI ACGT 1 cut(s) 67
TasI AATT 1 cut(s) 164
TfiI GAWTC 1 cut(s) 47
Tru1I TTAA 2 cut(s) 167, 182
Tru9I TTAA 2 cut(s) 167, 182
TseI GCWGC 1 cut(s) 53
TspDTI ATGAA 2 cut(s) 105, 144
Vha464I CTTAAG 1 cut(s) 181
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.