Rh7BG449800
BZIP Family

ABSCISIC ACID-INSENSITIVE 5-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0000739
Physical Location & Seq
Reverse (-)
52654306 .. 52655470
1165 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG449800.1

Sequence Viewer

Length: 300 bp
ATGCATATGATTAACACCCGTATATGCCTAATTCTGGTGGTTAAGATGGCAGAAGAGAATGATAAAGAACCGGGAATCTGCTGCTCGTTCACGTGCAAGGAAGCAGGTCTAGTTTTCATTCTTTTATTGTTGATCTTAGATTCCACCTGTGCTTTTCTTTTGTTACTTTTATCTGAAAAGAGAGAGTTGCAACAGGCTTATACAAATGAACTGGAGAACAAAGTTTCACGTCTGGAGGAGGAAAATGAAAGGCTAAGGAAGCAAAAGAGGCATTGTTGGGAATTAAGGATTTATTCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04075 map04075
Pfam Domains
Protein Families
bZIP_1

Protein Analysis

99

Amino Acids

11.67

Weight (kDa)

6.12

Isoelectric Point (pI)

64.4

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 95
AcvI CACGTG 1 cut(s) 93
AfiI CCNNNNNNNGG 1 cut(s) 34
AjiI CACGTC 1 cut(s) 230
ApeKI GCWGC 1 cut(s) 81
AsuC2I CCSGG 1 cut(s) 72
BbrPI CACGTG 1 cut(s) 93
BbvI GCAGC 1 cut(s) 68
BccI CCATC 1 cut(s) 40
BcnI CCSGG 1 cut(s) 72
BfaI CTAG 1 cut(s) 110
BfuAI ACCTGC 1 cut(s) 95
BisI GCNGC 1 cut(s) 82
BlsI GCNGC 1 cut(s) 83
Bme1390I CCNGG 1 cut(s) 72
BmgBI CACGTC 1 cut(s) 230
BmrFI CCNGG 1 cut(s) 72
BpmI CTGGAG 2 cut(s) 233, 254
Bpu10I CCTNAGC 1 cut(s) 254
BpuMI CCSGG 1 cut(s) 72
BsaAI YACGTR 1 cut(s) 93
Bsc4I CCNNNNNNNGG 1 cut(s) 34
Bse1I ACTGG 1 cut(s) 216
BseLI CCNNNNNNNGG 1 cut(s) 34
BseNI ACTGG 1 cut(s) 216
BseRI GAGGAG 1 cut(s) 251
BseXI GCAGC 1 cut(s) 68
BsiSI CCGG 1 cut(s) 71
BslI CCNNNNNNNGG 1 cut(s) 34
Bsp143I GATC 1 cut(s) 132
BspMI ACCTGC 1 cut(s) 95
BsrI ACTGG 1 cut(s) 216
BssMI GATC 1 cut(s) 132
Bst6I CTCTTC 1 cut(s) 48
BstBAI YACGTR 1 cut(s) 93
BstDEI CTNAG 2 cut(s) 136, 254
BstKTI GATC 1 cut(s) 135
BstMBI GATC 1 cut(s) 132
BstMWI GCNNNNNNNGC 2 cut(s) 259, 268
BstSCI CCNGG 1 cut(s) 70
BstV1I GCAGC 1 cut(s) 68
BtrI CACGTC 1 cut(s) 230
BveI ACCTGC 1 cut(s) 95
CviJI RGCY 2 cut(s) 197, 253
CviKI_1 RGCY 2 cut(s) 197, 253
DdeI CTNAG 2 cut(s) 136, 254
DpnI GATC 1 cut(s) 134
DpnII GATC 1 cut(s) 132
Eam1104I CTCTTC 1 cut(s) 48
EarI CTCTTC 1 cut(s) 48
Eco72I CACGTG 1 cut(s) 93
EcoT22I ATGCAT 1 cut(s) 6
FaiI YATR 5 cut(s) 6, 8, 23, 25, 201
FauNDI CATATG 1 cut(s) 6
Fnu4HI GCNGC 1 cut(s) 82
Fsp4HI GCNGC 1 cut(s) 82
FspBI CTAG 1 cut(s) 110
GluI GCNGC 1 cut(s) 82
GsuI CTGGAG 2 cut(s) 233, 254
HapII CCGG 1 cut(s) 71
HinfI GANTC 2 cut(s) 75, 140
HpaII CCGG 1 cut(s) 71
Hpy166II GTNNAC 1 cut(s) 90
Hpy188I TCNGA 1 cut(s) 175
Hpy188III TCNNGA 2 cut(s) 233, 297
Hpy8I GTNNAC 1 cut(s) 90
HpyCH4IV ACGT 2 cut(s) 92, 229
HpyCH4V TGCA 3 cut(s) 4, 96, 190
HpyF10VI GCNNNNNNNGC 2 cut(s) 259, 268
HpyF3I CTNAG 2 cut(s) 136, 254
HpySE526I ACGT 2 cut(s) 92, 229
Kzo9I GATC 1 cut(s) 132
LpnPI CCDG 7 cut(s) 20, 84, 90, 160, 179, 197, 218
Lsp1109I GCAGC 1 cut(s) 68
MaeI CTAG 1 cut(s) 110
MaeII ACGT 2 cut(s) 92, 229
MaeIII GTNAC 1 cut(s) 162
MalI GATC 1 cut(s) 134
MboI GATC 1 cut(s) 132
MboII GAAGA 1 cut(s) 65
MluCI AATT 2 cut(s) 30, 281
MnlI CCTC 3 cut(s) 229, 232, 261
Mph1103I ATGCAT 1 cut(s) 6
MseI TTAA 3 cut(s) 12, 42, 284
MspI CCGG 1 cut(s) 71
MspR9I CCNGG 1 cut(s) 72
MwoI GCNNNNNNNGC 2 cut(s) 259, 268
NciI CCSGG 1 cut(s) 72
NdeI CATATG 1 cut(s) 6
NdeII GATC 1 cut(s) 132
NsiI ATGCAT 1 cut(s) 6
PfeI GAWTC 2 cut(s) 75, 140
PkrI GCNGC 1 cut(s) 83
PmaCI CACGTG 1 cut(s) 93
PmlI CACGTG 1 cut(s) 93
Ppu21I YACGTR 1 cut(s) 93
PspCI CACGTG 1 cut(s) 93
SaqAI TTAA 3 cut(s) 12, 42, 284
SatI GCNGC 1 cut(s) 82
Sau3AI GATC 1 cut(s) 132
ScrFI CCNGG 1 cut(s) 72
SetI ASST 4 cut(s) 95, 109, 149, 232
Sse9I AATT 2 cut(s) 30, 281
SspMI CTAG 1 cut(s) 110
StyD4I CCNGG 1 cut(s) 70
TaiI ACGT 2 cut(s) 95, 232
TasI AATT 2 cut(s) 30, 281
TfiI GAWTC 2 cut(s) 75, 140
Tru1I TTAA 3 cut(s) 12, 42, 284
Tru9I TTAA 3 cut(s) 12, 42, 284
TseI GCWGC 1 cut(s) 81
TspDTI ATGAA 3 cut(s) 106, 222, 261
XspI CTAG 1 cut(s) 110
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.