pycom11g13920

germin-like protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
Physical Location & Seq
Forward (+)
13725418 .. 13728784
3367 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2412 bp
ATGATTTTTCTAATATCCGACACCATCATCCGCCACCTAAAAAAATTAACTAAACCTTACACAACATTCTCAAGTGTAATGAGTGAAATAACCAATATCAATACAACTTACTCAACCCGGATAGGTATATGCAAACCAAAGCTTCCTCTTCAAATCCTCTACCATGAATATAACTTTGAAGGAAATCACACATTAAAGGGCAAAGCTTGCTCTTCATATCAACTCTCCACTAATGTAAGTCAATGCAACACCAAAGATCAAAGAAAGGATATGGAAAAACTAAAGCTTAAGAAATACCAAGATATCTTCATAATTGGCGTCCAGGACTCGTGTCATAAGGATGGAACAATTTCGAACTCTTCTTTTCTAATTCTTTTGAATTTTTTTCTTTTCTCTCTCTCTCTCTCTCCTTTTTTTTTTTTTTTTTTTTTTTTAAGAAGAATAAAAATAGTACTATGCATGGTACCTCGGTACACGCTACATCTTCGATCTAGAACCCAACCTTTATCTTTCCTTGATATCCACTTGGTATCCCTTAAATGCATAATGAAAGAAAAGACTGAGTGTTTGGCTTCAAAAGGCTCAAACGATCTGAACATGGCCTTAATCATCTCTCTAATGTTGCATGACTTAGGATTTCGTTATCTTGAAACTCACAAGAAAGAATATGCAAGAGGCTCAAAATCTCACAAGGGTTCAATAAGACCAACACCATTCGAAGGTGGTGGCCTGCCTTGCCTAAATCAGTCATGTTTGACTGAGCTTGCACGTATTCTTGTGTACTGTGATTCAATGGATCTAAAAAGATTTCTGGAAGAAGGTTTAAATAATTTCAAAGAGCTTCACAGTGATGGAAGCCTCACACTCATTTTATTGAAATTGCTCACTCTCTCTCTTACATGGCAAAATGAATATTACCGTTGCACTGGGGAGGGAATATCTCATGTTATCTATCCTATGAGACAGTTACATGTGTCATGCAACACTACTTACTCTAACTTAATCTTGAGCATCCATTTGGAATGTAATCCAAGGGCTCTAATTAAAACAATACCCAGTACAGTGGAGCACCAAAGAGAGTCCCAACAAATAGACAATAAGAAAGTTTGGCAAGTCTCTGTACAAAGCTGTTCTCTCTATAAACAAAGGTTAAGCTGGAACGTTTGTGAACAAAGCCAAATGCTCGTAAGCATATACTTCTGTTCTACTTCATCTATATATTTAATGCTGATCACGATAATTAACACGAGAAAAATTAATATTGTAAACTCCAACTACAACAAGGCCTGCAGCAACAAATTAATAAATTTGAATATAGTCCCTAGAAGCACAACTATCTCGTCCAACTCAAATTTAGTTAATCAGGTTTCAACAATGGCCTCCAGAACTTCAAGCCTCAGATTCTTCTCACTAATAATTTTTTCATTTGCCATTGTCCAAATGGCAATAGCCGGAGACCCGGACATTATTACTGACTTCATAGTGCCGCCAAATGCAAATGGAACTGTAGATGGAAACTTCTTTACATACACCGGCTTTCGTGCCCTTGTTGAAGGAGACCCTCCCACAGCCTTCAAGGTTATGAAGGCATCCTTGATTGAATTCCCTGCTCTTAATGGGCAGAGTGTTTCATATGCCGTCCTTCAGTTCCCAAATGGCACTACCAACCCACCACACACTCATCCTCGCTCGGCTGAGCTACTTTTCCTCGTTAGTGGTACCCTTGAAGTTGGCTTGGTTGACACCAAAAACAACCTCTTTACGCAGACGCTTCAGACAGGTGATCTGTTTGTGTTTCCCAAGGGACTTGCGCACTTCCAGTACAATGTTGATGCAGAAAACCCAGCCATAGCAATTTCTGCATTTGGAAGTGCAAATGCAGGAACTGTATCAATACCCTCCACCTTGTTCACCACCGGCATCGACGACAATGTGTTGGCTATCTCCTTCAAGACTGATGTTGGCACCATTCAAAAGCTCAAGGCTGGTCTTGCTCCCAAGCCAATTACCAGTAATGTGTTCAAGGGTTATTCTCGACTATATCATAACATTTCCTTGATTATTTGTGGTGGATTAATGTTTTTTTTTGTATTAAATAATATTTTGCTTTTACAATTCAGTATAAAAGTTTTTTTTTTTTTTGTTAAAAAGGGCGCATGTCTGATTCTAAACAAGAAGGGTTGTTCGATGTGGGTGTATGCGGAGGGTGTGAGGTGTATGTATAAGGAGTTGGATTCTCTCCCCTCTTTTTTTCCTTTCCTTTCACTCCCCTCCTATTTGAACGATCACGAAGAGGGAAGGGAAAGGGATGGAAAGAGGAGGGGAGATAATTCTAAATCCATATGTATAGTGCGGAGTGTGCAGGTAGTAGTGGAAAATATGTGGATGGAGAATGTGAGGTGCATTGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

804

Amino Acids

90.64

Weight (kDa)

9.09

Isoelectric Point (pI)

37.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cupin_1 PF00190 529 - 654 3.7e-29 Cupin
Cupin_2 PF07883 549 - 620 7.4e-11 Cupin domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000346)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g08590 FvH4_3g08600 FvH4_3g25280 FvH4_3g25310 FvH4_3g25320 FvH4_3g25340
malus_domestica MD03G1148000.v1.1 MD11G1166800.v1.1 MD11G1166900.v1.1 MD11G1167000.v1.1 MD11G1167300.v1.1 MD11G1167400.v1.1 MD11G1169200.v1.1 MD11G1169300.v1.1
prunus_persica Prupe.2G051900_v2.0.a1 Prupe.2G052000_v2.0.a1 Prupe.6G132900_v2.0.a1 Prupe.6G133000_v2.0.a1 Prupe.6G133100_v2.0.a1 Prupe.6G133200_v2.0.a1 Prupe.6G133300_v2.0.a1 Prupe.6G133400_v2.0.a1
pyrus_communis pycom02g19060 pycom11g13850 pycom11g13920 pycom11g13930 pycom13g26450
rosa_chinensis RchiOBHm_Chr5g0046741 RchiOBHm_Chr5g0046751 RchiOBHm_Chr5g0046771 RchiOBHm_Chr5g0046781 RchiOBHm_Chr5g0046791 RchiOBHm_Chr5g0046801 RchiOBHm_Chr5g0046811 RchiOBHm_Chr5g0046821
rosa_laevigata RLG00000029833 RLG00000029836 RLG00000034439 RLG00000034440 RLG00000034441 RLG00000034442 RLG00000034446 RLG00000034447 RLG00000034448 RLG00000034449 RLG00000034450
rosa_multiflora Rmu_co8272763.1_g000001 Rmu_co8405265.1_g000001 Rmu_sc0002264.1_g000001 Rmu_sc0002264.1_g000009 Rmu_sc0002264.1_g000010 Rmu_sc0002264.1_g000013 Rmu_sc0002264.1_g000024 Rmu_sc0004673.1_g000002 Rmu_sc0006050.1_g000018 Rmu_sc0006050.1_g000030 Rmu_sc0010683.1_g000003 Rmu_sc0010683.1_g000005 Rmu_sc0015021.1_g000001 Rmu_sc0019490.1_g000007 Rmu_sc0025079.1_g000001
rosa_roxburghii Rroxscaffold_1G00034530 Rroxscaffold_1G00034540 Rroxscaffold_1G00034550 Rroxscaffold_1G00034610 Rroxscaffold_1G00034620 Rroxscaffold_1G00034630
rosa_rugosa Rorug01G0085700 Rorug01G0085700 Rorug05G0231300 Rorug05G0231300 Rorug05G0231500 Rorug05G0231900 Rorug05G0232000 Rorug05G0232100 Rorug05G0232200
rosa_samantha Rh1AG104300 Rh1BG082600 Rh5AG311400 Rh5BG319600 Rh5BG319700 Rh5BG319800 Rh5BG319900 Rh5BG320100 Rh5BG320200 Rh5BG320400 Rh5CG345600 Rh5CG345700 Rh5CG345800 Rh5CG345900 Rh5CG346100 Rh5CG346400 Rh5CG346500 Rh5CG346600 Rh5DG330400 Rh5DG330500 Rh5DG330600 Rh5DG330700 Rh5DG330800 Rh5DG330900 Rh5DG331000 Rh5DG331100
rosa_wichuraiana Rw0G015910 Rw5G029040 Rw5G029050 Rw5G029060 Rw5G029070 Rw5G029100 Rw5G029110

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1812
Acc36I ACCTGC 1 cut(s) 2353
Acc65I GGTACC 2 cut(s) 463, 1718
AccB1I GGYRCC 3 cut(s) 463, 1718, 1964
AciI CCGC 4 cut(s) 31, 1487, 2201, 2353
AclI AACGTT 1 cut(s) 1161
AclWI GGATC 1 cut(s) 804
AcsI RAATTY 4 cut(s) 379, 1306, 1351, 1601
AcuI CTGAAG 2 cut(s) 1628, 1757
AcyI GRCGYC 1 cut(s) 318
AfaI GTAC 8 cut(s) 453, 465, 473, 782, 1060, 1122, 1720, 1823
AfiI CCNNNNNNNGG 1 cut(s) 719
AflII CTTAAG 1 cut(s) 287
AflIII ACRYGT 1 cut(s) 970
AjnI CCWGG 1 cut(s) 321
AluBI AGCT 9 cut(s) 142, 206, 286, 763, 841, 1128, 1155, 1699, 1978
AluI AGCT 9 cut(s) 142, 206, 286, 763, 841, 1128, 1155, 1699, 1978
Alw21I GWGCWC 1 cut(s) 1071
Alw26I GTCTC 4 cut(s) 955, 1120, 1449, 1551
AlwI GGATC 1 cut(s) 804
AlwNI CAGNNNCTG 1 cut(s) 1886
AoxI GGCC 4 cut(s) 600, 727, 1284, 1377
ApeKI GCWGC 1 cut(s) 1290
ApoI RAATTY 4 cut(s) 379, 1306, 1351, 1601
ArsI GACNNNNNNTTYG 2 cut(s) 550, 582
AseI ATTAAT 3 cut(s) 1257, 1301, 2075
Asp700I GAANNNNTTC 1 cut(s) 349
Asp718I GGTACC 2 cut(s) 463, 1718
AspLEI GCGC 2 cut(s) 1813, 2156
AsuC2I CCSGG 2 cut(s) 118, 1460
AsuHPI GGTGA 2 cut(s) 1793, 1903
AsuII TTCGAA 2 cut(s) 353, 717
BaeGI GKGCMC 1 cut(s) 1546
BaeI ACNNNNGTAYC 2 cut(s) 455, 488
BanI GGYRCC 3 cut(s) 463, 1718, 1964
BanII GRGCYC 1 cut(s) 1039
BauI CACGAG 2 cut(s) 328, 1246
Bbv12I GWGCWC 1 cut(s) 1071
BbvI GCAGC 1 cut(s) 1302
BccI CCATC 6 cut(s) 32, 335, 845, 1505, 2303, 2380
BceAI ACGGC 1 cut(s) 1622
BciT130I CCWGG 1 cut(s) 323
BciVI GTATCC 1 cut(s) 541
BclI TGATCA 1 cut(s) 1230
BcnI CCSGG 2 cut(s) 118, 1460
BcoDI GTCTC 4 cut(s) 955, 1120, 1449, 1551
BfaI CTAG 2 cut(s) 492, 1323
BfmI CTRYAG 2 cut(s) 1288, 1506
BfrI CTTAAG 1 cut(s) 287
BfuAI ACCTGC 1 cut(s) 2353
BfuI GTATCC 1 cut(s) 541
BisI GCNGC 2 cut(s) 1291, 1487
BlpI GCTNAGC 1 cut(s) 1695
BlsI GCNGC 2 cut(s) 1292, 1488
BmcAI AGTACT 1 cut(s) 453
Bme1390I CCNGG 3 cut(s) 118, 323, 1460
BmiI GGNNCC 3 cut(s) 465, 1720, 1966
BmrFI CCNGG 3 cut(s) 118, 323, 1460
BmrI ACTGGG 2 cut(s) 936, 1050
BmsI GCATC 4 cut(s) 1020, 1598, 1822, 1929
BmuI ACTGGG 2 cut(s) 936, 1050
BoxI GACNNNNGTC 1 cut(s) 330
BpmI CTGGAG 1 cut(s) 1366
Bpu1102I GCTNAGC 1 cut(s) 1695
Bpu14I TTCGAA 2 cut(s) 353, 717
BpuEI CTTGAG 3 cut(s) 55, 1027, 1964
BpuMI CCSGG 2 cut(s) 118, 1460
BsaAI YACGTR 1 cut(s) 770
BsaHI GRCGYC 1 cut(s) 318
BsaI GGTCTC 2 cut(s) 1449, 1551
BsaJI CCNNGG 3 cut(s) 467, 1031, 1800
Bsc4I CCNNNNNNNGG 1 cut(s) 719
Bse118I RCCGGY 2 cut(s) 1532, 1916
Bse1I ACTGG 4 cut(s) 931, 1056, 1819, 2010
BseBI CCWGG 1 cut(s) 323
BseDI CCNNGG 3 cut(s) 467, 1031, 1800
BseGI GGATG 7 cut(s) 27, 346, 1011, 1589, 1681, 2314, 2391
BseLI CCNNNNNNNGG 1 cut(s) 719
BseMII CTCAG 4 cut(s) 552, 750, 1411, 1686
BseNI ACTGG 4 cut(s) 931, 1056, 1819, 2010
BseRI GAGGAG 1 cut(s) 2332
BseSI GKGCMC 1 cut(s) 1546
BseXI GCAGC 1 cut(s) 1302
BseYI CCCAGC 1 cut(s) 1843
BsgI GTGCAG 1 cut(s) 2381
BshFI GGCC 4 cut(s) 602, 729, 1286, 1379
BshNI GGYRCC 3 cut(s) 463, 1718, 1964
BsiHKAI GWGCWC 1 cut(s) 1071
BsiSI CCGG 5 cut(s) 118, 1452, 1460, 1533, 1917
BslFI GGGAC 3 cut(s) 1066, 1304, 1818
BslI CCNNNNNNNGG 1 cut(s) 719
BsmAI GTCTC 4 cut(s) 955, 1120, 1449, 1551
BsmFI GGGAC 3 cut(s) 1066, 1304, 1818
BsnI GGCC 4 cut(s) 602, 729, 1286, 1379
Bso31I GGTCTC 2 cut(s) 1449, 1551
Bsp119I TTCGAA 2 cut(s) 353, 717
Bsp1286I GDGCHC 3 cut(s) 1039, 1071, 1546
Bsp1407I TGTACA 1 cut(s) 1120
Bsp143I GATC 7 cut(s) 256, 488, 589, 796, 1230, 1783, 2284
Bsp1720I GCTNAGC 1 cut(s) 1695
BspACI CCGC 4 cut(s) 31, 1487, 2201, 2353
BspANI GGCC 4 cut(s) 602, 729, 1286, 1379
BspCNI CTCAG 4 cut(s) 553, 751, 1410, 1687
BspLI GGNNCC 3 cut(s) 465, 1720, 1966
BspMAI CTGCAG 1 cut(s) 1292
BspMI ACCTGC 1 cut(s) 2353
BspPI GGATC 1 cut(s) 804
BspQI GCTCTTC 1 cut(s) 217
BspT104I TTCGAA 2 cut(s) 353, 717
BspT107I GGYRCC 3 cut(s) 463, 1718, 1964
BspTI CTTAAG 1 cut(s) 287
BspTNI GGTCTC 2 cut(s) 1449, 1551
BsrFI RCCGGY 2 cut(s) 1532, 1916
BsrGI TGTACA 1 cut(s) 1120
BsrI ACTGG 4 cut(s) 931, 1056, 1819, 2010
BssAI RCCGGY 2 cut(s) 1532, 1916
BssECI CCNNGG 3 cut(s) 467, 1031, 1800
BssMI GATC 7 cut(s) 256, 488, 589, 796, 1230, 1783, 2284
BssNI GRCGYC 1 cut(s) 318
BssSI CACGAG 2 cut(s) 328, 1246
BssT1I CCWWGG 2 cut(s) 1031, 1800
Bst2BI CACGAG 2 cut(s) 328, 1246
Bst2UI CCWGG 1 cut(s) 323
Bst4CI ACNGT 7 cut(s) 785, 848, 920, 966, 1063, 1507, 1888
Bst6I CTCTTC 4 cut(s) 153, 217, 364, 2286
BstACI GRCGYC 1 cut(s) 318
BstAFI CTTAAG 1 cut(s) 287
BstAPI GCANNNNNTGC 2 cut(s) 207, 1859
BstAUI TGTACA 1 cut(s) 1120
BstBAI YACGTR 1 cut(s) 770
BstBI TTCGAA 2 cut(s) 353, 717
BstC8I GCNNGC 4 cut(s) 208, 731, 765, 1288
BstDEI CTNAG 5 cut(s) 561, 631, 759, 1397, 1695
BstF5I GGATG 7 cut(s) 27, 346, 1011, 1589, 1681, 2314, 2391
BstHHI GCGC 2 cut(s) 1813, 2156
BstKTI GATC 7 cut(s) 259, 491, 592, 799, 1233, 1786, 2287
BstMAI GTCTC 4 cut(s) 955, 1120, 1449, 1551
BstMBI GATC 7 cut(s) 256, 488, 589, 796, 1230, 1783, 2284
BstMWI GCNNNNNNNGC 5 cut(s) 207, 735, 1859, 1991, 2359
BstNI CCWGG 1 cut(s) 323
BstNSI RCATGY 2 cut(s) 974, 2160
BstPAI GACNNNNGTC 1 cut(s) 330
BstSCI CCNGG 3 cut(s) 116, 321, 1458
BstSFI CTRYAG 2 cut(s) 1288, 1506
BstSLI GKGCMC 1 cut(s) 1546
BstV1I GCAGC 1 cut(s) 1302
BstX2I RGATCY 1 cut(s) 796
BstXI CCANNNNNNTGG 1 cut(s) 1063
BstYI RGATCY 1 cut(s) 796
BsuI GTATCC 1 cut(s) 541
BsuRI GGCC 4 cut(s) 602, 729, 1286, 1379
BtsCI GGATG 7 cut(s) 27, 346, 1011, 1589, 1681, 2314, 2391
BtsIMutI CAGTG 3 cut(s) 853, 924, 1068
BveI ACCTGC 1 cut(s) 2353
Cac8I GCNNGC 4 cut(s) 208, 731, 765, 1288
CaiI CAGNNNCTG 1 cut(s) 1886
CfoI GCGC 2 cut(s) 1813, 2156
Cfr10I RCCGGY 2 cut(s) 1532, 1916
CseI GACGC 2 cut(s) 307, 1777
Csp6I GTAC 8 cut(s) 452, 464, 472, 781, 1059, 1121, 1719, 1822
CviQI GTAC 8 cut(s) 452, 464, 472, 781, 1059, 1121, 1719, 1822
DdeI CTNAG 5 cut(s) 561, 631, 759, 1397, 1695
DpnI GATC 7 cut(s) 258, 490, 591, 798, 1232, 1785, 2286
DpnII GATC 7 cut(s) 256, 488, 589, 796, 1230, 1783, 2284
DraI TTTAAA 1 cut(s) 825
Eam1104I CTCTTC 4 cut(s) 153, 217, 364, 2286
EarI CTCTTC 4 cut(s) 153, 217, 364, 2286
EciI GGCGGA 1 cut(s) 20
Eco130I CCWWGG 2 cut(s) 1031, 1800
Eco147I AGGCCT 1 cut(s) 1286
Eco24I GRGCYC 1 cut(s) 1039
Eco31I GGTCTC 2 cut(s) 1449, 1551
Eco32I GATATC 2 cut(s) 304, 520
Eco57I CTGAAG 2 cut(s) 1628, 1757
EcoRI GAATTC 1 cut(s) 1601
EcoRII CCWGG 1 cut(s) 321
EcoRV GATATC 2 cut(s) 304, 520
EcoT14I CCWWGG 2 cut(s) 1031, 1800
EcoT22I ATGCAT 2 cut(s) 461, 545
EcoT38I GRGCYC 1 cut(s) 1039
ErhI CCWWGG 2 cut(s) 1031, 1800
FalI AAGNNNNNCTT 2 cut(s) 1577, 1609
FaqI GGGAC 3 cut(s) 1066, 1304, 1818
FauNDI CATATG 2 cut(s) 1633, 2342
FbaI TGATCA 1 cut(s) 1230
Fnu4HI GCNGC 2 cut(s) 1291, 1487
FokI GGATG 7 cut(s) 14, 353, 998, 1576, 1668, 2321, 2398
FriOI GRGCYC 1 cut(s) 1039
Fsp4HI GCNGC 2 cut(s) 1291, 1487
FspBI CTAG 2 cut(s) 492, 1323
FspI TGCGCA 1 cut(s) 1812
GlaI GCGC 2 cut(s) 1812, 2155
GluI GCNGC 2 cut(s) 1291, 1487
GsaI CCCAGC 1 cut(s) 1847
GsuI CTGGAG 1 cut(s) 1366
HaeIII GGCC 4 cut(s) 602, 729, 1286, 1379
HapII CCGG 5 cut(s) 118, 1452, 1460, 1533, 1917
HgaI GACGC 2 cut(s) 307, 1777
HhaI GCGC 2 cut(s) 1813, 2156
Hin1I GRCGYC 1 cut(s) 318
Hin6I GCGC 2 cut(s) 1811, 2154
HinP1I GCGC 2 cut(s) 1811, 2154
HincII GTYRAC 1 cut(s) 1741
HindII GTYRAC 1 cut(s) 1741
HindIII AAGCTT 3 cut(s) 140, 204, 284
HinfI GANTC 6 cut(s) 326, 788, 1079, 1401, 2164, 2234
HpaII CCGG 5 cut(s) 118, 1452, 1460, 1533, 1917
HphI GGTGA 2 cut(s) 1793, 1903
Hpy166II GTNNAC 6 cut(s) 474, 781, 1169, 1267, 1741, 1911
Hpy188I TCNGA 5 cut(s) 19, 594, 1400, 1776, 2163
Hpy188III TCNNGA 9 cut(s) 492, 647, 812, 1006, 1234, 1383, 1951, 2034, 2288
Hpy8I GTNNAC 6 cut(s) 474, 781, 1169, 1267, 1741, 1911
Hpy99I CGWCG 1 cut(s) 1928
HpyCH4III ACNGT 7 cut(s) 785, 848, 920, 966, 1063, 1507, 1888
HpyCH4IV ACGT 2 cut(s) 769, 1161
HpyF10VI GCNNNNNNNGC 5 cut(s) 207, 735, 1859, 1991, 2359
HpyF3I CTNAG 5 cut(s) 561, 631, 759, 1397, 1695
HpySE526I ACGT 2 cut(s) 769, 1161
Hsp92I GRCGYC 1 cut(s) 318
HspAI GCGC 2 cut(s) 1811, 2154
KpnI GGTACC 2 cut(s) 467, 1722
Ksp22I TGATCA 1 cut(s) 1230
Kzo9I GATC 7 cut(s) 256, 488, 589, 796, 1230, 1783, 2284
LguI GCTCTTC 1 cut(s) 217
LmnI GCTCC 2 cut(s) 1066, 1999
Lsp1109I GCAGC 1 cut(s) 1302
LweI GCATC 4 cut(s) 1020, 1598, 1822, 1929
MaeI CTAG 2 cut(s) 492, 1323
MaeII ACGT 2 cut(s) 769, 1161
MaeIII GTNAC 1 cut(s) 966
MalI GATC 7 cut(s) 258, 490, 591, 798, 1232, 1785, 2286
MboI GATC 7 cut(s) 256, 488, 589, 796, 1230, 1783, 2284
MboII GAAGA 9 cut(s) 140, 204, 298, 351, 450, 476, 827, 1396, 2303
MflI RGATCY 1 cut(s) 796
MhlI GDGCHC 3 cut(s) 1039, 1071, 1546
MlyI GAGTC 2 cut(s) 320, 1088
MmeI TCCRAC 4 cut(s) 42, 1296, 1368, 2211
Mph1103I ATGCAT 2 cut(s) 461, 545
MroXI GAANNNNTTC 1 cut(s) 349
MslI CAYNNNNRTG 2 cut(s) 339, 849
MspCI CTTAAG 1 cut(s) 287
MspI CCGG 5 cut(s) 118, 1452, 1460, 1533, 1917
MspR9I CCNGG 3 cut(s) 118, 323, 1460
MvaI CCWGG 1 cut(s) 323
MwoI GCNNNNNNNGC 5 cut(s) 207, 735, 1859, 1991, 2359
NciI CCSGG 2 cut(s) 118, 1460
NdeI CATATG 2 cut(s) 1633, 2342
NdeII GATC 7 cut(s) 256, 488, 589, 796, 1230, 1783, 2284
NlaIV GGNNCC 3 cut(s) 465, 1720, 1966
NmeAIII GCCGAG 1 cut(s) 1670
NsbI TGCGCA 1 cut(s) 1812
NsiI ATGCAT 2 cut(s) 461, 545
NspI RCATGY 2 cut(s) 974, 2160
NspV TTCGAA 2 cut(s) 353, 717
PceI AGGCCT 1 cut(s) 1286
PciI ACATGT 1 cut(s) 970
PciSI GCTCTTC 1 cut(s) 217
PdmI GAANNNNTTC 1 cut(s) 349
PfeI GAWTC 4 cut(s) 788, 1401, 2164, 2234
PfoI TCCNGGA 1 cut(s) 321
PkrI GCNGC 2 cut(s) 1292, 1488
PleI GAGTC 2 cut(s) 320, 1087
PpsI GAGTC 2 cut(s) 320, 1087
Ppu21I YACGTR 1 cut(s) 770
PscI ACATGT 1 cut(s) 970
PshAI GACNNNNGTC 1 cut(s) 330
PshBI ATTAAT 3 cut(s) 1257, 1301, 2075
Psp1406I AACGTT 1 cut(s) 1161
Psp6I CCWGG 1 cut(s) 321
PspFI CCCAGC 1 cut(s) 1843
PspGI CCWGG 1 cut(s) 321
PspN4I GGNNCC 3 cut(s) 465, 1720, 1966
PstI CTGCAG 1 cut(s) 1292
PstNI CAGNNNCTG 1 cut(s) 1886
PsuI RGATCY 1 cut(s) 796
RsaI GTAC 8 cut(s) 453, 465, 473, 782, 1060, 1122, 1720, 1823
RsaNI GTAC 8 cut(s) 452, 464, 472, 781, 1059, 1121, 1719, 1822
RseI CAYNNNNRTG 2 cut(s) 339, 849
SapI GCTCTTC 1 cut(s) 217
SatI GCNGC 2 cut(s) 1291, 1487
Sau3AI GATC 7 cut(s) 256, 488, 589, 796, 1230, 1783, 2284
ScaI AGTACT 1 cut(s) 453
SchI GAGTC 2 cut(s) 320, 1088
ScrFI CCNGG 3 cut(s) 118, 323, 1460
SduI GDGCHC 3 cut(s) 1039, 1071, 1546
SfaNI GCATC 4 cut(s) 1020, 1598, 1822, 1929
SfcI CTRYAG 2 cut(s) 1288, 1506
SfuI TTCGAA 2 cut(s) 353, 717
SmiMI CAYNNNNRTG 2 cut(s) 339, 849
SmlI CTYRAG 4 cut(s) 70, 287, 1006, 1979
SmoI CTYRAG 4 cut(s) 70, 287, 1006, 1979
SseBI AGGCCT 1 cut(s) 1286
SsiI CCGC 4 cut(s) 31, 1487, 2201, 2353
SspI AATATT 3 cut(s) 914, 1261, 2101
SspMI CTAG 2 cut(s) 492, 1323
StuI AGGCCT 1 cut(s) 1286
StyD4I CCNGG 3 cut(s) 116, 321, 1458
StyI CCWWGG 2 cut(s) 1031, 1800
TaaI ACNGT 7 cut(s) 785, 848, 920, 966, 1063, 1507, 1888
TaiI ACGT 2 cut(s) 772, 1164
TaqI TCGA 6 cut(s) 353, 487, 717, 1923, 2035, 2186
TatI WGTACW 5 cut(s) 451, 780, 1058, 1120, 1821
TauI GCSGC 1 cut(s) 1489
TfiI GAWTC 4 cut(s) 788, 1401, 2164, 2234
TscAI CASTG 3 cut(s) 853, 931, 1068
TseI GCWGC 1 cut(s) 1290
TspRI CASTG 3 cut(s) 853, 931, 1068
Vha464I CTTAAG 1 cut(s) 287
VspI ATTAAT 3 cut(s) 1257, 1301, 2075
XapI RAATTY 4 cut(s) 379, 1306, 1351, 1601
XbaI TCTAGA 1 cut(s) 491
XceI RCATGY 2 cut(s) 974, 2160
XcmI CCANNNNNNNNNTGG 1 cut(s) 1438
XmnI GAANNNNTTC 1 cut(s) 349
XspI CTAG 2 cut(s) 492, 1323
ZrmI AGTACT 1 cut(s) 453
Zsp2I ATGCAT 2 cut(s) 461, 545
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.