histone-lysine N-methyltransferase, H3 lysine-9 specific
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 186 |
| Acc36I | ACCTGC | 1 cut(s) | 559 |
| Acc65I | GGTACC | 2 cut(s) | 547, 599 |
| AccB1I | GGYRCC | 3 cut(s) | 547, 599, 2481 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 728 |
| AccI | GTMKAC | 2 cut(s) | 1203, 2451 |
| AccIII | TCCGGA | 1 cut(s) | 28 |
| AciI | CCGC | 6 cut(s) | 152, 177, 1310, 1750, 2021, 2485 |
| AclWI | GGATC | 9 cut(s) | 84, 726, 739, 1450, 1813, 1978, 2164, 2566, 2730 |
| AcuI | CTGAAG | 4 cut(s) | 650, 2118, 2202, 2829 |
| AcvI | CACGTG | 1 cut(s) | 296 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 728, 833, 1213, 1622, 1652, 1699, 2501 |
| AflII | CTTAAG | 1 cut(s) | 1237 |
| AflIII | ACRYGT | 1 cut(s) | 1541 |
| AhlI | ACTAGT | 1 cut(s) | 1658 |
| AjiI | CACGTC | 1 cut(s) | 1544 |
| AjnI | CCWGG | 6 cut(s) | 168, 849, 1457, 1863, 2790, 3132 |
| AleI | CACNNNNGTG | 1 cut(s) | 972 |
| Alw21I | GWGCWC | 4 cut(s) | 113, 124, 2790, 3197 |
| Alw44I | GTGCAC | 1 cut(s) | 3193 |
| AlwI | GGATC | 9 cut(s) | 84, 726, 739, 1450, 1813, 1978, 2164, 2566, 2730 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 149, 476, 2534 |
| Ama87I | CYCGRG | 1 cut(s) | 311 |
| Aor13HI | TCCGGA | 1 cut(s) | 28 |
| AoxI | GGCC | 2 cut(s) | 1930, 2059 |
| ApaLI | GTGCAC | 1 cut(s) | 3193 |
| ApeKI | GCWGC | 5 cut(s) | 224, 470, 485, 1811, 3074 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1702, 1734 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 49 |
| Asp718I | GGTACC | 2 cut(s) | 547, 599 |
| AspLEI | GCGC | 1 cut(s) | 318 |
| AspS9I | GGNCC | 2 cut(s) | 658, 2630 |
| AsuC2I | CCSGG | 1 cut(s) | 1878 |
| AsuHPI | GGTGA | 5 cut(s) | 290, 711, 1714, 2579, 2938 |
| AvaI | CYCGRG | 1 cut(s) | 311 |
| AvaII | GGWCC | 2 cut(s) | 658, 2630 |
| BaeGI | GKGCMC | 1 cut(s) | 3197 |
| BamHI | GGATCC | 1 cut(s) | 731 |
| BanI | GGYRCC | 3 cut(s) | 547, 599, 2481 |
| BanII | GRGCYC | 1 cut(s) | 2790 |
| BauI | CACGAG | 1 cut(s) | 215 |
| BbrPI | CACGTG | 1 cut(s) | 296 |
| BbsI | GAAGAC | 3 cut(s) | 693, 773, 1605 |
| Bbv12I | GWGCWC | 4 cut(s) | 113, 124, 2790, 3197 |
| BbvI | GCAGC | 5 cut(s) | 211, 472, 482, 1798, 3061 |
| BccI | CCATC | 7 cut(s) | 743, 884, 907, 1189, 1348, 2207, 2873 |
| BceAI | ACGGC | 2 cut(s) | 794, 2983 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 206, 240 |
| BciT130I | CCWGG | 6 cut(s) | 170, 851, 1459, 1865, 2792, 3134 |
| BclI | TGATCA | 2 cut(s) | 325, 3034 |
| BcnI | CCSGG | 1 cut(s) | 1878 |
| BcuI | ACTAGT | 1 cut(s) | 1658 |
| BfaI | CTAG | 5 cut(s) | 1382, 1659, 1671, 2460, 3048 |
| BfmI | CTRYAG | 3 cut(s) | 771, 1735, 2857 |
| BfoI | RGCGCY | 1 cut(s) | 319 |
| BfrI | CTTAAG | 1 cut(s) | 1237 |
| BfuAI | ACCTGC | 1 cut(s) | 559 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 854 |
| BisI | GCNGC | 6 cut(s) | 225, 471, 486, 1812, 2485, 3075 |
| BlpI | GCTNAGC | 1 cut(s) | 489 |
| BlsI | GCNGC | 6 cut(s) | 226, 472, 487, 1813, 2486, 3076 |
| Bme1390I | CCNGG | 7 cut(s) | 170, 851, 1459, 1865, 1878, 2792, 3134 |
| Bme18I | GGWCC | 2 cut(s) | 658, 2630 |
| BmeT110I | CYCGRG | 1 cut(s) | 311 |
| BmgBI | CACGTC | 1 cut(s) | 1544 |
| BmgT120I | GGNCC | 2 cut(s) | 658, 2630 |
| BmiI | GGNNCC | 6 cut(s) | 549, 601, 660, 733, 2094, 2483 |
| BmrFI | CCNGG | 7 cut(s) | 170, 851, 1459, 1865, 1878, 2792, 3134 |
| BmrI | ACTGGG | 2 cut(s) | 2483, 2829 |
| BmsI | GCATC | 6 cut(s) | 9, 280, 1090, 1343, 2015, 2893 |
| BmuI | ACTGGG | 2 cut(s) | 2483, 2829 |
| BpiI | GAAGAC | 3 cut(s) | 693, 773, 1605 |
| BpmI | CTGGAG | 3 cut(s) | 782, 872, 3171 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 489 |
| BpuEI | CTTGAG | 3 cut(s) | 1113, 1601, 1808 |
| BpuMI | CCSGG | 1 cut(s) | 1878 |
| BsaAI | YACGTR | 1 cut(s) | 296 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2832 |
| BsaI | GGTCTC | 1 cut(s) | 2259 |
| BsaWI | WCCGGW | 1 cut(s) | 28 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1872, 1902, 2058, 2088 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 728, 833, 1213, 1622, 1652, 1699, 2501 |
| Bse1I | ACTGG | 4 cut(s) | 1995, 2489, 2824, 3202 |
| Bse3DI | GCAATG | 3 cut(s) | 626, 1712, 2977 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2832 |
| BseAI | TCCGGA | 1 cut(s) | 28 |
| BseBI | CCWGG | 6 cut(s) | 170, 851, 1459, 1865, 2792, 3134 |
| BseGI | GGATG | 9 cut(s) | 25, 340, 367, 895, 952, 1359, 2029, 2152, 2884 |
| BseJI | GATNNNNATC | 1 cut(s) | 2832 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 728, 833, 1213, 1622, 1652, 1699, 2501 |
| BseMI | GCAATG | 3 cut(s) | 626, 1712, 2977 |
| BseMII | CTCAG | 6 cut(s) | 63, 480, 1488, 2526, 2541, 3069 |
| BseNI | ACTGG | 4 cut(s) | 1995, 2489, 2824, 3202 |
| BseRI | GAGGAG | 5 cut(s) | 780, 816, 1190, 1635, 1794 |
| BseSI | GKGCMC | 1 cut(s) | 3197 |
| BseXI | GCAGC | 5 cut(s) | 211, 472, 482, 1798, 3061 |
| BsgI | GTGCAG | 1 cut(s) | 2571 |
| BshFI | GGCC | 2 cut(s) | 1932, 2061 |
| BshNI | GGYRCC | 3 cut(s) | 547, 599, 2481 |
| BsiHKAI | GWGCWC | 4 cut(s) | 113, 124, 2790, 3197 |
| BsiHKCI | CYCGRG | 1 cut(s) | 311 |
| BsiSI | CCGG | 2 cut(s) | 29, 1877 |
| BslFI | GGGAC | 6 cut(s) | 99, 830, 1022, 1047, 1574, 2596 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 728, 833, 1213, 1622, 1652, 1699, 2501 |
| BsmBI | CGTCTC | 1 cut(s) | 448 |
| BsmFI | GGGAC | 6 cut(s) | 99, 830, 1022, 1047, 1574, 2596 |
| BsmI | GAATGC | 1 cut(s) | 2528 |
| BsnI | GGCC | 2 cut(s) | 1932, 2061 |
| Bso31I | GGTCTC | 1 cut(s) | 2259 |
| BsoBI | CYCGRG | 1 cut(s) | 311 |
| Bsp1286I | GDGCHC | 4 cut(s) | 113, 124, 2790, 3197 |
| Bsp13I | TCCGGA | 1 cut(s) | 28 |
| Bsp1407I | TGTACA | 1 cut(s) | 1042 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 489 |
| Bsp19I | CCATGG | 1 cut(s) | 93 |
| BspACI | CCGC | 6 cut(s) | 152, 177, 1310, 1750, 2021, 2485 |
| BspANI | GGCC | 2 cut(s) | 1932, 2061 |
| BspCNI | CTCAG | 6 cut(s) | 64, 481, 1487, 2527, 2540, 3070 |
| BspEI | TCCGGA | 1 cut(s) | 28 |
| BspHI | TCATGA | 1 cut(s) | 3037 |
| BspLI | GGNNCC | 6 cut(s) | 549, 601, 660, 733, 2094, 2483 |
| BspMAI | CTGCAG | 1 cut(s) | 775 |
| BspMI | ACCTGC | 1 cut(s) | 559 |
| BspPI | GGATC | 9 cut(s) | 84, 726, 739, 1450, 1813, 1978, 2164, 2566, 2730 |
| BspT107I | GGYRCC | 3 cut(s) | 547, 599, 2481 |
| BspTI | CTTAAG | 1 cut(s) | 1237 |
| BspTNI | GGTCTC | 1 cut(s) | 2259 |
| BsrDI | GCAATG | 3 cut(s) | 626, 1712, 2977 |
| BsrGI | TGTACA | 1 cut(s) | 1042 |
| BsrI | ACTGG | 4 cut(s) | 1995, 2489, 2824, 3202 |
| BssNAI | GTATAC | 2 cut(s) | 1204, 2452 |
| BssSI | CACGAG | 1 cut(s) | 215 |
| BssT1I | CCWWGG | 3 cut(s) | 93, 2062, 2499 |
| Bst1107I | GTATAC | 2 cut(s) | 1204, 2452 |
| Bst2BI | CACGAG | 1 cut(s) | 215 |
| Bst2UI | CCWGG | 6 cut(s) | 170, 851, 1459, 1865, 2792, 3134 |
| Bst6I | CTCTTC | 5 cut(s) | 459, 687, 1752, 2790, 3161 |
| BstAFI | CTTAAG | 1 cut(s) | 1237 |
| BstAUI | TGTACA | 1 cut(s) | 1042 |
| BstBAI | YACGTR | 1 cut(s) | 296 |
| BstC8I | GCNNGC | 1 cut(s) | 2675 |
| BstDEI | CTNAG | 9 cut(s) | 72, 126, 400, 489, 1446, 1474, 2527, 2535, 3078 |
| BstDSI | CCRYGG | 4 cut(s) | 93, 603, 1346, 2173 |
| BstF5I | GGATG | 9 cut(s) | 25, 340, 367, 895, 952, 1359, 2029, 2152, 2884 |
| BstH2I | RGCGCY | 1 cut(s) | 319 |
| BstHHI | GCGC | 1 cut(s) | 318 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 854, 1233, 1938 |
| BstNI | CCWGG | 6 cut(s) | 170, 851, 1459, 1865, 2792, 3134 |
| BstNSI | RCATGY | 1 cut(s) | 1040 |
| BstSCI | CCNGG | 7 cut(s) | 168, 849, 1457, 1863, 1876, 2790, 3132 |
| BstSFI | CTRYAG | 3 cut(s) | 771, 1735, 2857 |
| BstSLI | GKGCMC | 1 cut(s) | 3197 |
| BstV1I | GCAGC | 5 cut(s) | 211, 472, 482, 1798, 3061 |
| BstV2I | GAAGAC | 3 cut(s) | 693, 773, 1605 |
| BstX2I | RGATCY | 6 cut(s) | 731, 1442, 1818, 1983, 2571, 2735 |
| BstYI | RGATCY | 6 cut(s) | 731, 1442, 1818, 1983, 2571, 2735 |
| BstZ17I | GTATAC | 2 cut(s) | 1204, 2452 |
| BsuRI | GGCC | 2 cut(s) | 1932, 2061 |
| BtgI | CCRYGG | 4 cut(s) | 93, 603, 1346, 2173 |
| BtgZI | GCGATG | 4 cut(s) | 32, 303, 1908, 1922 |
| BtrI | CACGTC | 1 cut(s) | 1544 |
| BtsCI | GGATG | 9 cut(s) | 25, 340, 367, 895, 952, 1359, 2029, 2152, 2884 |
| BtsIMutI | CAGTG | 3 cut(s) | 253, 396, 3195 |
| BveI | ACCTGC | 1 cut(s) | 559 |
| Cac8I | GCNNGC | 1 cut(s) | 2675 |
| CaiI | CAGNNNCTG | 3 cut(s) | 149, 476, 2534 |
| CciI | TCATGA | 1 cut(s) | 3037 |
| CfoI | GCGC | 1 cut(s) | 318 |
| Cfr13I | GGNCC | 2 cut(s) | 658, 2630 |
| CseI | GACGC | 2 cut(s) | 2963, 3053 |
| CsiI | ACCWGGT | 1 cut(s) | 3132 |
| DdeI | CTNAG | 9 cut(s) | 72, 126, 400, 489, 1446, 1474, 2527, 2535, 3078 |
| DraI | TTTAAA | 1 cut(s) | 2133 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 186 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 186 |
| Eam1104I | CTCTTC | 5 cut(s) | 459, 687, 1752, 2790, 3161 |
| EarI | CTCTTC | 5 cut(s) | 459, 687, 1752, 2790, 3161 |
| Ecl136II | GAGCTC | 1 cut(s) | 2788 |
| Eco130I | CCWWGG | 3 cut(s) | 93, 2062, 2499 |
| Eco24I | GRGCYC | 1 cut(s) | 2790 |
| Eco31I | GGTCTC | 1 cut(s) | 2259 |
| Eco47I | GGWCC | 2 cut(s) | 658, 2630 |
| Eco53kI | GAGCTC | 1 cut(s) | 2788 |
| Eco57I | CTGAAG | 4 cut(s) | 650, 2118, 2202, 2829 |
| Eco72I | CACGTG | 1 cut(s) | 296 |
| Eco88I | CYCGRG | 1 cut(s) | 311 |
| EcoICRI | GAGCTC | 1 cut(s) | 2788 |
| EcoO109I | RGGNCCY | 1 cut(s) | 658 |
| EcoRI | GAATTC | 1 cut(s) | 3051 |
| EcoRII | CCWGG | 6 cut(s) | 168, 849, 1457, 1863, 2790, 3132 |
| EcoT14I | CCWWGG | 3 cut(s) | 93, 2062, 2499 |
| EcoT22I | ATGCAT | 2 cut(s) | 628, 2369 |
| EcoT38I | GRGCYC | 1 cut(s) | 2790 |
| ErhI | CCWWGG | 3 cut(s) | 93, 2062, 2499 |
| Esp3I | CGTCTC | 1 cut(s) | 448 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1231, 1263 |
| FaqI | GGGAC | 6 cut(s) | 99, 830, 1022, 1047, 1574, 2596 |
| FauI | CCCGC | 1 cut(s) | 1743 |
| FauNDI | CATATG | 1 cut(s) | 2203 |
| FbaI | TGATCA | 2 cut(s) | 325, 3034 |
| FblI | GTMKAC | 2 cut(s) | 1203, 2451 |
| Fnu4HI | GCNGC | 6 cut(s) | 225, 471, 486, 1812, 2485, 3075 |
| FokI | GGATG | 9 cut(s) | 12, 347, 374, 902, 959, 1366, 2036, 2159, 2891 |
| FriOI | GRGCYC | 1 cut(s) | 2790 |
| Fsp4HI | GCNGC | 6 cut(s) | 225, 471, 486, 1812, 2485, 3075 |
| FspBI | CTAG | 5 cut(s) | 1382, 1659, 1671, 2460, 3048 |
| GlaI | GCGC | 1 cut(s) | 317 |
| GluI | GCNGC | 6 cut(s) | 225, 471, 486, 1812, 2485, 3075 |
| GsuI | CTGGAG | 3 cut(s) | 782, 872, 3171 |
| HaeII | RGCGCY | 1 cut(s) | 319 |
| HaeIII | GGCC | 2 cut(s) | 1932, 2061 |
| HapII | CCGG | 2 cut(s) | 29, 1877 |
| HgaI | GACGC | 2 cut(s) | 2963, 3053 |
| HhaI | GCGC | 1 cut(s) | 318 |
| Hin6I | GCGC | 1 cut(s) | 316 |
| HinP1I | GCGC | 1 cut(s) | 316 |
| HincII | GTYRAC | 2 cut(s) | 304, 3105 |
| HindII | GTYRAC | 2 cut(s) | 304, 3105 |
| HindIII | AAGCTT | 4 cut(s) | 1415, 1742, 2108, 2264 |
| HpaII | CCGG | 2 cut(s) | 29, 1877 |
| HphI | GGTGA | 5 cut(s) | 290, 711, 1714, 2579, 2938 |
| Hpy166II | GTNNAC | 9 cut(s) | 251, 304, 977, 1204, 1244, 1541, 2452, 3105, 3195 |
| Hpy8I | GTNNAC | 9 cut(s) | 251, 304, 977, 1204, 1244, 1541, 2452, 3105, 3195 |
| Hpy99I | CGWCG | 1 cut(s) | 518 |
| HpyCH4IV | ACGT | 3 cut(s) | 295, 1086, 1543 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 854, 1233, 1938 |
| HpyF3I | CTNAG | 9 cut(s) | 72, 126, 400, 489, 1446, 1474, 2527, 2535, 3078 |
| HpySE526I | ACGT | 3 cut(s) | 295, 1086, 1543 |
| HspAI | GCGC | 1 cut(s) | 316 |
| Kpn2I | TCCGGA | 1 cut(s) | 28 |
| KpnI | GGTACC | 2 cut(s) | 551, 603 |
| Ksp22I | TGATCA | 2 cut(s) | 325, 3034 |
| LmnI | GCTCC | 2 cut(s) | 127, 2793 |
| Lsp1109I | GCAGC | 5 cut(s) | 211, 472, 482, 1798, 3061 |
| LweI | GCATC | 6 cut(s) | 9, 280, 1090, 1343, 2015, 2893 |
| MabI | ACCWGGT | 1 cut(s) | 3132 |
| MaeI | CTAG | 5 cut(s) | 1382, 1659, 1671, 2460, 3048 |
| MaeII | ACGT | 3 cut(s) | 295, 1086, 1543 |
| MaeIII | GTNAC | 3 cut(s) | 212, 509, 2657 |
| MfeI | CAATTG | 1 cut(s) | 321 |
| MflI | RGATCY | 6 cut(s) | 731, 1442, 1818, 1983, 2571, 2735 |
| MhlI | GDGCHC | 4 cut(s) | 113, 124, 2790, 3197 |
| MlyI | GAGTC | 2 cut(s) | 1621, 2402 |
| MmeI | TCCRAC | 1 cut(s) | 1281 |
| Mph1103I | ATGCAT | 2 cut(s) | 628, 2369 |
| MroI | TCCGGA | 1 cut(s) | 28 |
| MroXI | GAANNNNTTC | 1 cut(s) | 49 |
| MseI | TTAA | 8 cut(s) | 57, 131, 194, 443, 621, 777, 1238, 2132 |
| MslI | CAYNNNNRTG | 3 cut(s) | 333, 972, 1065 |
| MspA1I | CMGCKG | 1 cut(s) | 1811 |
| MspCI | CTTAAG | 1 cut(s) | 1237 |
| MspI | CCGG | 2 cut(s) | 29, 1877 |
| MspR9I | CCNGG | 7 cut(s) | 170, 851, 1459, 1865, 1878, 2792, 3134 |
| MunI | CAATTG | 1 cut(s) | 321 |
| Mva1269I | GAATGC | 1 cut(s) | 2528 |
| MvaI | CCWGG | 6 cut(s) | 170, 851, 1459, 1865, 2792, 3134 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 854, 1233, 1938 |
| NciI | CCSGG | 1 cut(s) | 1878 |
| NcoI | CCATGG | 1 cut(s) | 93 |
| NdeI | CATATG | 1 cut(s) | 2203 |
| NlaIV | GGNNCC | 6 cut(s) | 549, 601, 660, 733, 2094, 2483 |
| NmuCI | GTSAC | 1 cut(s) | 212 |
| NsiI | ATGCAT | 2 cut(s) | 628, 2369 |
| NspI | RCATGY | 1 cut(s) | 1040 |
| OliI | CACNNNNGTG | 1 cut(s) | 972 |
| PagI | TCATGA | 1 cut(s) | 3037 |
| PasI | CCCWGGG | 1 cut(s) | 169 |
| PctI | GAATGC | 1 cut(s) | 2528 |
| PdmI | GAANNNNTTC | 1 cut(s) | 49 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 728 |
| PfoI | TCCNGGA | 2 cut(s) | 1457, 2790 |
| PkrI | GCNGC | 6 cut(s) | 226, 472, 487, 1813, 2486, 3076 |
| PleI | GAGTC | 2 cut(s) | 1620, 2401 |
| PmaCI | CACGTG | 1 cut(s) | 296 |
| PmlI | CACGTG | 1 cut(s) | 296 |
| PpsI | GAGTC | 2 cut(s) | 1620, 2401 |
| Ppu21I | YACGTR | 1 cut(s) | 296 |
| PpuMI | RGGWCCY | 1 cut(s) | 658 |
| Psp124BI | GAGCTC | 1 cut(s) | 2790 |
| Psp5II | RGGWCCY | 1 cut(s) | 658 |
| Psp6I | CCWGG | 6 cut(s) | 168, 849, 1457, 1863, 2790, 3132 |
| PspCI | CACGTG | 1 cut(s) | 296 |
| PspGI | CCWGG | 6 cut(s) | 168, 849, 1457, 1863, 2790, 3132 |
| PspN4I | GGNNCC | 6 cut(s) | 549, 601, 660, 733, 2094, 2483 |
| PspPI | GGNCC | 2 cut(s) | 658, 2630 |
| PspPPI | RGGWCCY | 1 cut(s) | 658 |
| PsrI | GAACNNNNNNTAC | 4 cut(s) | 795, 827, 1648, 1680 |
| PstI | CTGCAG | 1 cut(s) | 775 |
| PstNI | CAGNNNCTG | 3 cut(s) | 149, 476, 2534 |
| PsuI | RGATCY | 6 cut(s) | 731, 1442, 1818, 1983, 2571, 2735 |
| PvuII | CAGCTG | 1 cut(s) | 1811 |
| RseI | CAYNNNNRTG | 3 cut(s) | 333, 972, 1065 |
| SacI | GAGCTC | 1 cut(s) | 2790 |
| SaqAI | TTAA | 8 cut(s) | 57, 131, 194, 443, 621, 777, 1238, 2132 |
| SatI | GCNGC | 6 cut(s) | 225, 471, 486, 1812, 2485, 3075 |
| Sau96I | GGNCC | 2 cut(s) | 658, 2630 |
| SchI | GAGTC | 2 cut(s) | 1621, 2402 |
| ScrFI | CCNGG | 7 cut(s) | 170, 851, 1459, 1865, 1878, 2792, 3134 |
| SduI | GDGCHC | 4 cut(s) | 113, 124, 2790, 3197 |
| SexAI | ACCWGGT | 1 cut(s) | 3132 |
| SfaNI | GCATC | 6 cut(s) | 9, 280, 1090, 1343, 2015, 2893 |
| SfcI | CTRYAG | 3 cut(s) | 771, 1735, 2857 |
| SinI | GGWCC | 2 cut(s) | 658, 2630 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 333, 972, 1065 |
| SmlI | CTYRAG | 4 cut(s) | 1128, 1237, 1580, 1823 |
| SmoI | CTYRAG | 4 cut(s) | 1128, 1237, 1580, 1823 |
| SpeI | ACTAGT | 1 cut(s) | 1658 |
| SsiI | CCGC | 6 cut(s) | 152, 177, 1310, 1750, 2021, 2485 |
| SspI | AATATT | 1 cut(s) | 1504 |
| SspMI | CTAG | 5 cut(s) | 1382, 1659, 1671, 2460, 3048 |
| SstI | GAGCTC | 1 cut(s) | 2790 |
| StyD4I | CCNGG | 7 cut(s) | 168, 849, 1457, 1863, 1876, 2790, 3132 |
| StyI | CCWWGG | 3 cut(s) | 93, 2062, 2499 |
| TaiI | ACGT | 3 cut(s) | 298, 1089, 1546 |
| TaqI | TCGA | 3 cut(s) | 38, 452, 793 |
| TatI | WGTACW | 1 cut(s) | 1042 |
| TauI | GCSGC | 1 cut(s) | 2487 |
| Tru1I | TTAA | 8 cut(s) | 57, 131, 194, 443, 621, 777, 1238, 2132 |
| Tru9I | TTAA | 8 cut(s) | 57, 131, 194, 443, 621, 777, 1238, 2132 |
| TscAI | CASTG | 3 cut(s) | 253, 396, 3202 |
| TseFI | GTSAC | 1 cut(s) | 212 |
| TseI | GCWGC | 5 cut(s) | 224, 470, 485, 1811, 3074 |
| Tsp45I | GTSAC | 1 cut(s) | 212 |
| TspGWI | ACGGA | 4 cut(s) | 107, 1335, 2162, 2577 |
| TspRI | CASTG | 3 cut(s) | 253, 396, 3202 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 728 |
| Vha464I | CTTAAG | 1 cut(s) | 1237 |
| VneI | GTGCAC | 1 cut(s) | 3193 |
| VpaK11BI | GGWCC | 2 cut(s) | 658, 2630 |
| XceI | RCATGY | 1 cut(s) | 1040 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1949, 2313 |
| XmiI | GTMKAC | 2 cut(s) | 1203, 2451 |
| XmnI | GAANNNNTTC | 1 cut(s) | 49 |
| XspI | CTAG | 5 cut(s) | 1382, 1659, 1671, 2460, 3048 |
| Zsp2I | ATGCAT | 2 cut(s) | 628, 2369 |